Spo11446 (gene)

Overview
NameSpo11446
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionChaperonin 10 family protein
LocationSpoScf_00676 : 203050 .. 206611 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTAATCCTCGAACTTTCCAGAAGCAGTGCCCCACCCGAAAAATCAACGGCCAGTTATTATCTTTCAACAATCCATCAAACATATCACCACAAACAATCAACGGTTTGAAATTAAACTACCCATCCTTACTCTCTCTAAATAAAGCTTTACCAAACAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTACATTTTTATTTGTTGTTTGAATTTCATTTTGCAATTTAAATATCTGATTTATTAATTGTTAGAAGCTATTTTTACCTGAATTGCTTACCCATTTTCTGATTTATTTCCAGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTAATTTTCCTTTCTCTTACTTTTTATTTTGATCTGGGGGTTGATTAAAATTTGAGGTATTAATTCTTAATTTAAATATTGTATGTTTTTGGTAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGGTATAATCTAATTTATGTTTTAGCTATTTCGTAGTGTTACACTGTTCTAGTTAATGTTAATATGGAAATTTTGATGTTTTTTGGTTCTTTTTGTACAAAACAATATGATGATATAATCATATAATTCTCGTATTAAATGATTAGGGTTTTATCAATTAAATTTGTTCAAAATTTATCCCTTTGCTTGATATTTTATAAAAATCTAGTACAGAATCAAAATGGTTTGGTAGTTTTATTGCCCGTGAAGAATTATCTAAAGCAATGTAGATGACAAAATGGCTTAAACACATACACACTGAAGATAGAAACCGTTATAAGTGATTTCCTCTTCAATGGCATTGTTCGTAGACGAAAAAGAATGTTCTGATGATGGTACTAACTATGGTACTATTACATTACTACTAACCAATCTAAAGGAACACAAGGTCAGTCTATACGAGACTTTTGATGCGTTCCTAAAAATATTTCATTCTTTTTTTAAGGAATGTAATAGTGTTGCTGTCACGATTAGCTAGCTTTAGTTCTTCAAAGATGATATTGTGATACTTTACTGTGGATAGCGAAAGCCAGAAGAACATTTTGTATTGAAAACTTGCTTCTGACCTCCTTTTAGGGCTACTTATCATGCTTTTTTAGGGGTTATTTAAAGTTCCCGAAGTTACCAAATACAAGTAGTTATCAGTTATCAATACTTGTTGGTGTCTCTGCAAGCCTATTCTCCAAATAATAGGACATCGTCTAAGTTCCTTCTAGAACTGTGTAGGTGACGTATTTGAATCTGTTGGCGTATTTACTTGGTTGACGTCTACACAACACTTGAGAGAACTTTAAATATTTCTCCATTCAAATATAGCTGTTCATTATTGTACAAATTTGAAAAAAAAAGTAGCTAGAGCAAAAGTTTCAACACGTGTTAATCCTTAAGGAGTCTTTAAAGTTGTATCAGCTACTATTGCTGATTATGATATCGCTTATTTGTGTGAAATATTATTAGAAATCAGTCGGTGGAGTTCTTTGGCCTAAGTCAGCAGTGAAGTTGACAAATTGGCTTAAACACATGCACACTAAGAGTTCTAAATTTAATCAGGATAGAAACCGTAACAAGCGATATGCTCTTTAATGGCACCATTTATTGAAAGAAAAGAGACAATGCGATACTTAACTGTGAATAGTAAAAGCTTGCTTATTGGTGGTTATTTAAAGTTTCCGAAGTTATCATAGACGAAGTAGCTATCAGTTACATTGGAGGGGTATTTGTTGGTGTCTCCTCAAGCCTATTCTTAAAATACTAGGACCTTGTCTATGTCTGTTCTTCCTTTTGTACATTGGCTTAGCTGAAGCATTCTTAGTGCCATGCTTTTTGATATTGATGTTCAGGAGATCACCCTATGGACTATGGAACAAATTAGCCAACTCATATAAGTTGCTTCTAGAAATGCGTAGGTAAAGTATTTAATCTGTTGGCGTTTCCACTTGGTTGATGACACAATACTTGAGTGAGCTTTAAATGTTAATTATACAGGAACTTTATGTGGAGAAATATTTAATAAAAAAATAGTTAAATAATAATTCTAAAATATACATGCATGTACGGGACCTAATCTAGTACTATGTAGTTGTTTATGTAGCTTAGTGTTCTCTGCCAGTTTAAAACAAAAACAAGCTAGAGCAAAAGTTGCCTCGTACGTTACATATGGGAATCTTAAGGAGTGTATGAAGTTGTATCAGCTGATATTGCTGATTATGATATACAAATATGTAGGATTTGGAATTGGCAATAGCCTTTGGTGACTCCTGTCCTTGTCCTGGTCTGAAAGGCATCCTCACTCTAGCCTTTATAATGTTAAGAAGTTTACATACATTGCATTTGCATAAGATGTTTTTGAGATATTTTGTGTGACTAATTTGTTTGAAATGGTATTAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGGTATGGAAGTTCTGTTGTCTTGGACACTAATCCTTATTCCAAGCATTTGTTTTTATGAGCAAACTTTGAAGCCTTCTTCATGCTTACAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTATAGCCAATTTGCCCTACTTGTTAGGCAACATAACACATGCAAAATGTGTCTTAAAACACCCTTATTGAGCAGACGAACGTTAATTTGTGTGTGCAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAGATCATTCAGAGGGCTTCACTTGATTTTACCATTAGACCCTTTTTTTAGTTAAAAATCAGAGTTTTCGTTTACAAAGATAGTCTTTTTGTTATTCTGCTTTATGTAAGCACCAAATTATTTTCAACCGTCAATGGGTTTTGAATTTTTGATTCTTGATGCAGCGGACAGGAATTGTGAAATGTGTTGATAGGGTAAATGCGAACAAATATGAAGTTTAAATCTCATTTGGAATGAATTCAAATGAAACTGATGCAGAGACATGCTTCCTTTGAACTTGGCCGTTTTTAAGGAATTTAGGATGTCCTGTCAAAAATCTTCAATCTTTTTTGATATTTGGGGTTCTGATTATGTCAACTGATAACGTCAAAGGGAAATTTGCATTAACTTTCAATTTCAGTAGCGAATTTAGCAGGGATCTCATTTTGAGGTTTCCTTCCCCAGTTCCCTATCAAAACTGATATTGGCGTAACCTTGAGTCCACGTGCCATAAAAAATATTTACTTTTCAATCGGTGTAGATAAGATTTGATCACCAGTTTTCAATATTCACAAATAGAGCAATATGAAATACTTCTTCCAATTTTTAAT

mRNA sequence

ATGAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAGATCATTCAGAGGGCTTCACTTGATTTTACCATTAGACCCTTTTTTTAGTTAAAAATCAGAGTTTTCGTTTACAAAGATAGTCTTTTTGTTATTCTGCTTTATGTAAGCACCAAATTATTTTCAACCGTCAATGGGTTTTGAATTTTTGATTCTTGATGCAGCGGACAGGAATTGTGAAATGTGTTGATAGGGTAAATGCGAACAAATATGAAGTTTAAATCTCATTTGGAATGAATTCAAATGAAACTGATGCAGAGACATGCTTCCTTTGAACTTGGCCGTTTTTAAGGAATTTAGGATGTCCTGTCAAAAATCTTCAATCTTTTTTGATATTTGGGGTTCTGATTATGTCAACTGATAACGTCAAAGGGAAATTTGCATTAACTTTCAATTTCAGTAGCGAATTTAGCAGGGATCTCATTTTGAGGTTTCCTTCCCCAGTTCCCTATCAAAACTGATATTGGCGTAACCTTGAGTCCACGTGCCATAAAAAATATTTACTTTTCAATCGGTGTAGATAAGATTTGATCACCAGTTTTCAATATTCACAAATAGAGCAATATGAAATACTTCTTCCAATTTTTAAT

Coding sequence (CDS)

ATGAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAG

Protein sequence

MSKHGVTVLTPLFLTRAHTLFLSPPNLSMASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11446.1Spo11446.1mRNA


Homology
[Close]
BLAST of Spo11446.1 vs. NCBI nr
Match: gi|902235774|gb|KNA24077.1| (hypothetical protein SOVF_018330 [Spinacia oleracea])

HSP 1 Score: 268.1 bits (684), Expect = 1.000e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI
Sbjct: 1   MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 120

Query: 149 EGRHCFCKESDLLAVVE 166
           EGRHCFCKESDLLAVVE
Sbjct: 121 EGRHCFCKESDLLAVVE 137
[Close]
BLAST of Spo11446.1 vs. NCBI nr
Match: gi|731360743|ref|XP_010691984.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.3 bits (573), Expect = 7.700e-56
Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST +F++LAKPFSLPNN +S   N RL+G RRN L VNAVATKWEP+KVVPQ D VLI
Sbjct: 1   MASTTSFITLAKPFSLPNNNYS---NQRLIGLRRNNLRVNAVATKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLE+LPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVE GKKVLFSD+SAYEVDLG+
Sbjct: 61  RLEDLPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVETGKKVLFSDISAYEVDLGS 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKESDLLAVVE
Sbjct: 121 DSRHCFCKESDLLAVVE 134
[Close]
BLAST of Spo11446.1 vs. NCBI nr
Match: gi|225453275|ref|XP_002267346.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera])

HSP 1 Score: 199.1 bits (505), Expect = 5.900e-48
Identity = 101/137 (73.72%), Postives = 120/137 (87.59%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST  F++LA+PFS  +   + + + RLLG R +AL +NA+A KWEP+KVVPQ D VLI
Sbjct: 1   MAST--FITLARPFS-SHKPHTPSPSKRLLGLRSSALKINAIAKKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RL++LPEKS+GGVLLPKSAVKFERYLMGEILS+G+DVGEVEAGKKVLFSD++AYEVDLG 
Sbjct: 61  RLQDLPEKSSGGVLLPKSAVKFERYLMGEILSIGADVGEVEAGKKVLFSDINAYEVDLGT 120

Query: 149 EGRHCFCKESDLLAVVE 166
           +GRHCFCKESDLLAVVE
Sbjct: 121 DGRHCFCKESDLLAVVE 134
[Close]
BLAST of Spo11446.1 vs. NCBI nr
Match: gi|694390790|ref|XP_009370952.1| (PREDICTED: 20 kDa chaperonin, chloroplastic isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 198.7 bits (504), Expect = 7.700e-48
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLL-GSRRNALTVNAVATKWEPSKVVPQGDGVL 88
           MAST  FV+L  P     NT S +++ +LL G RRN+L V+A+ATKWEP+KVVPQ D VL
Sbjct: 1   MAST--FVTLPTPLLYKPNTASLSNSQKLLPGLRRNSLRVDAIATKWEPTKVVPQADRVL 60

Query: 89  IRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLG 148
           IRLEELP+KSAGGVLLPKSAVKFERYLMGEILSVG+DVGEV+AGKKVLFSD++AYEVDLG
Sbjct: 61  IRLEELPQKSAGGVLLPKSAVKFERYLMGEILSVGADVGEVKAGKKVLFSDINAYEVDLG 120

Query: 149 AEGRHCFCKESDLLAVVE 166
            +GRHCFCKES+LLAVVE
Sbjct: 121 VDGRHCFCKESELLAVVE 136
[Close]
BLAST of Spo11446.1 vs. NCBI nr
Match: gi|567905974|ref|XP_006445475.1| (hypothetical protein CICLE_v10022799mg [Citrus clementina])

HSP 1 Score: 198.4 bits (503), Expect = 1.000e-47
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1 

		  

Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136
[Close]
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018330 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.200e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI
Sbjct: 1   MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 120

Query: 149 EGRHCFCKESDLLAVVE 166
           EGRHCFCKESDLLAVVE
Sbjct: 121 EGRHCFCKESDLLAVVE 137
[Close]
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFX6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017230 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.400e-56
Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST +F++LAKPFSLPNN +S   N RL+G RRN L VNAVATKWEP+KVVPQ D VLI
Sbjct: 1   MASTTSFITLAKPFSLPNNNYS---NQRLIGLRRNNLRVNAVATKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLE+LPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVE GKKVLFSD+SAYEVDLG+
Sbjct: 61  RLEDLPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVETGKKVLFSDISAYEVDLGS 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKESDLLAVVE
Sbjct: 121 DSRHCFCKESDLLAVVE 134
[Close]
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: V4U3T8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022799mg PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.000e-48
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1 

		  

Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136
[Close]
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A067H0A0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032685mg PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.000e-48
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1 

		  

Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136
[Close]
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: K4AYQ1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.000e-46
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST  F++LAKPF+  +      S  R +G RRN+L +NA++ KWEP+KVVPQ D VLI
Sbjct: 1   MAST--FLTLAKPFTSHSTNLPSFSPQRPIGLRRNSLRINAISQKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGE+LSVGSDV +VE GKKVLFSD++AYEVDLG 
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEVLSVGSDVAQVETGKKVLFSDINAYEVDLGT 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKES+LLA+VE
Sbjct: 121 DARHCFCKESELLALVE 135
[Close]
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=groS PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.500e-8
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 1 

		  

Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S + P GD VL+++ +  EK+AGG+ LP +A   E+  +GE+++VG    +D G     E
Sbjct: 9   STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAK--EKPQVGEVVAVGPGKRNDEGKLIPME 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           ++AG KVL+S  +  EV LG++  +    E D+LA+V+
Sbjct: 69  LKAGDKVLYSKYAGTEVKLGSD-EYVLLAERDILAIVQ 103
[Close]
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 1 

		  

Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD V +++    EK+AGG+LLP +A   E+  +GEI++VG    +D G     E
Sbjct: 9   STVKPLGDRVFVKVSASEEKTAGGILLPDTAK--EKPQIGEIVTVGPGKRNDDGSRSEPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           V+ G KVL+S  +  ++ LG E  +    E D+LAVV+
Sbjct: 69  VKVGDKVLYSKYAGTDIKLGGED-YVLLSEKDILAVVD 103
[Close]
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1 

		  

Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD + I++ E  EK+AGG+LLP SA   E+  +GE+  VG    +D G     E
Sbjct: 9   STVKPLGDRIFIKVSESEEKTAGGILLPDSAK--EKPQVGEVAQVGPGKLNDDGSRQTPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVV 165
           V  G KVL+S  +  ++ LG +  +    E D+LAVV
Sbjct: 69  VSIGDKVLYSKYAGTDIKLGGD-EYVLLSEKDILAVV 102
[Close]
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1 

		  

Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD + I++ E  EK+AGG+LLP SA   E+  +GE+  VG    +D G     E
Sbjct: 9   STVKPLGDRIFIKVSESEEKTAGGILLPDSAK--EKPQVGEVAQVGPGKLNDDGSRQTPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVV 165
           V  G KVL+S  +  ++ LG +  +    E D+LAVV
Sbjct: 69  VSIGDKVLYSKYAGTDIKLGGD-EYVLLSEKDILAVV 102
[Close]
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.800e-8
Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 1 

		  

Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S + P GD VL+++ +  EK+AGG+ LP +A   E+  +GE+++VG    +D G     E
Sbjct: 9   STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAK--EKPQVGEVVAVGPGKRNDEGKLIPME 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           ++AG +VL+S  +  EV LG++  +    E D+LA+V+
Sbjct: 69  LKAGDRVLYSKYAGTEVKLGSD-EYVLLAERDILAIVQ 103
[Close]
BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT3G60210.1 (GroES-like family protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.800e-45
Identity = 92/136 (67.65%), Postives = 111/136 (81.62%), Query Frame = 1 

		  

Query: 33  AAFVSLAKPF-SLPNNTFSRN-SNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRL 92
           ++F+++ KPF S P  T +       LLG RRN+  +NAV+TKWEP+KVVPQ D VL+RL
Sbjct: 3   SSFITVPKPFLSFPIKTNAPTLPQQTLLGIRRNSFRINAVSTKWEPAKVVPQADRVLVRL 62

Query: 93  EELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAE- 152
           E LPEKS+GGVLLPKSAVKFERYL GE++SVGS+VGEVE GKKVLFSD+SAYEVD G E 
Sbjct: 63  EVLPEKSSGGVLLPKSAVKFERYLTGEVVSVGSEVGEVEPGKKVLFSDMSAYEVDFGTED 122

Query: 153 GRHCFCKESDLLAVVE 166
            +HCFCKESDLLA+V+
Sbjct: 123 AKHCFCKESDLLAIVQ 138
[Close]
BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT2G44650.1 (chloroplast chaperonin 10)

HSP 1 Score: 172.2 bits (435), Expect = 2.700e-43
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 1 

		  

Query: 29  MASTAAFVSLAKPF-SLP-NNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGV 88
           MAST    SL  PF + P   T    +N  LLGSRR  L + A++TKWEP+KVVPQ D V
Sbjct: 1   MASTFV-CSLPNPFFAFPVKATTPSTANHTLLGSRRGCLRIKAISTKWEPTKVVPQADRV 60

Query: 89  LIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVG-EVEAGKKVLFSDVSAYEVD 148
           L+RLE+LP KS+GGVLLPK+AVKFERYL GEI+SVGS+VG +V  GK+VLFSDVSAYEVD
Sbjct: 61  LVRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVD 120

Query: 149 LGAEGRHCFCKESDLLAVVE 166
           LG + RHCFCKESDLLA+VE
Sbjct: 121 LGTDARHCFCKESDLLALVE 139
[Close]
BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT5G20720.1 (chaperonin 20)

HSP 1 Score: 52.8 bits (125), Expect = 2.400e-7
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 1 

		  

Query: 17  AHTLFLSPPNLSMASTAAF----VSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVAT 76
           A  L  SP  +S  S A+      S  K  SL   T  ++   RL+         + VA 
Sbjct: 3   ATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLV-----VKAASVVAP 62

Query: 77  KWEPSKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGS--DVGE--- 136
           K+  + + P GD VL++++E  EK+ GG+LLP +A    +   GE+++VG    +G+   
Sbjct: 63  KY--TSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQ--SKPQGGEVVAVGEGRTIGKNKI 122

Query: 137 ---VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
              V  G ++++S  +  EV+   + +H   KE D++ ++E
Sbjct: 123 DITVPTGAQIIYSKYAGTEVEFN-DVKHLILKEDDIVGILE 153
The following BLAST results are available for this feature:
BLAST of Spo11446.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235774|gb|KNA24077.1|1.0e-68100.hypothetical protein SOVF_0183... [more]
gi|731360743|ref|XP_010691984.1|7.7e-5683.2PREDICTED: 20 kDa chaperonin, ... [more]
gi|225453275|ref|XP_002267346.1|5.9e-4873.7PREDICTED: 20 kDa chaperonin, ... [more]
gi|694390790|ref|XP_009370952.1|7.7e-4875.3PREDICTED: 20 kDa chaperonin, ... [more]
gi|567905974|ref|XP_006445475.1|1.0e-4774.6hypothetical protein CICLE_v10... [more]
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BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RYX6_SPIOL7.2e-69100.Uncharacterized protein OS=Spi... [more]
A0A0J8BFX6_BETVU5.4e-5683.2Uncharacterized protein OS=Bet... [more]
V4U3T8_9ROSI7.0e-4874.6Uncharacterized protein OS=Cit... [more]
A0A067H0A0_CITSI7.0e-4874.6Uncharacterized protein OS=Cit... [more]
K4AYQ1_SOLLC1.0e-4671.5Uncharacterized protein OS=Sol... [more]
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BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CH10_SYNJB3.5e-837.710 kDa chaperonin OS=Synechoco... [more]
CH10_CYAP86.0e-839.810 kDa chaperonin OS=Cyanothec... [more]
CH10_PROM56.0e-840.210 kDa chaperonin OS=Prochloro... [more]
CH10_PROMP6.0e-840.210 kDa chaperonin OS=Prochloro... [more]
CH10_SYNJA7.8e-836.710 kDa chaperonin OS=Synechoco... [more]
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BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G60210.13.8e-4567.6GroES-like family protein[more]
AT2G44650.12.7e-4367.1chloroplast chaperonin 10[more]
AT5G20720.12.4e-728.5chaperonin 20[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011032GroES-likeunknownSSF50129GroES-likecoord: 78..165
score: 3.47
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 103..124
score: 7.3E-5coord: 151..164
score: 7.3E-5coord: 79..94
score: 7.3E-5coord: 129..141
score: 7.
IPR020818GroES chaperonin familyGENE3D2.30.33.40coord: 78..165
score: 9.7
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 16..165
score: 9.2
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 78..164
score: 9.3
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 78..164
score: 5.8
NoneNo IPR availablePANTHERPTHR10772:SF13CHLOROPLAST CHAPERONIN 10coord: 16..165
score: 9.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0060003 copper ion export
biological_process GO:0008152 metabolic process
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009644 response to high light intensity
biological_process GO:0006412 translation
biological_process GO:0009744 response to sucrose
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0009639 response to red or far red light
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0016043 cellular component organization
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0042793 plastid transcription
biological_process GO:0010114 response to red light
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009637 response to blue light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010218 response to far red light
biological_process GO:0006414 translational elongation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0015979 photosynthesis
biological_process GO:0009657 plastid organization
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009523 photosystem II
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0044425 membrane part
cellular_component GO:0005746 mitochondrial respiratory chain
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009507 chloroplast
cellular_component GO:0034357 photosynthetic membrane
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0016020 membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004008 copper-exporting ATPase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008693 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004853 uroporphyrinogen decarboxylase activity
molecular_function GO:0003743 translation initiation factor activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo017140.80Barchart | Table
Spo236520.76Barchart | Table
Spo011290.75Barchart | Table
Spo273460.75Barchart | Table
Spo153020.74Barchart | Table
Spo271020.74Barchart | Table
Spo060310.74Barchart | Table
Spo210670.74Barchart | Table
Spo185020.74Barchart | Table
Spo025730.73Barchart | Table
Spo113170.72Barchart | Table
Spo233840.72Barchart | Table
Spo253690.72Barchart | Table
Spo073900.71Barchart | Table
Spo146780.71Barchart | Table
Spo032510.71Barchart | Table
Spo181850.71Barchart | Table
Spo169550.71Barchart | Table
Spo092670.70Barchart | Table
Spo093350.70Barchart | Table
Spo104930.70Barchart | Table
Spo020680.70Barchart | Table
Spo248570.70Barchart | Table
Spo102850.69Barchart | Table
Spo300340.69Barchart | Table
Spo238570.69Barchart | Table
Spo181110.69Barchart | Table
Spo210460.69Barchart | Table
Spo197590.69Barchart | Table
Spo194590.69Barchart | Table
Spo166410.69Barchart | Table
Spo184710.69Barchart | Table
Spo014370.69Barchart | Table
Spo225830.69Barchart | Table
Spo095360.69Barchart | Table
Spo098030.69Barchart | Table
Spo155170.68Barchart | Table
Spo020850.68Barchart | Table
Spo005660.68Barchart | Table
Spo178750.68Barchart | Table
Spo184000.68Barchart | Table
Spo226830.68Barchart | Table
Spo270620.67Barchart | Table
Spo300040.67Barchart | Table
Spo200570.67Barchart | Table
Spo144160.67Barchart | Table
Spo134900.67Barchart | Table
Spo062930.67Barchart | Table
Spo031950.67Barchart | Table
Spo217680.67Barchart | Table
Spo072970.66Barchart | Table
Spo050730.66Barchart | Table
Spo046530.66Barchart | Table
Spo147790.66Barchart | Table
Spo122020.66Barchart | Table
Spo210210.66Barchart | Table
Spo121220.66Barchart | Table
Spo119610.66Barchart | Table
Spo008720.66Barchart | Table
Spo228570.66Barchart | Table
Spo073060.66Barchart | Table
Spo259180.66Barchart | Table
Spo260060.66Barchart | Table
Spo270810.66Barchart | Table
Spo271630.66Barchart | Table
Spo167970.66Barchart | Table
Spo258020.66Barchart | Table
Spo256590.65Barchart | Table
Spo151490.65Barchart | Table
Spo132090.65Barchart | Table
Spo013050.65Barchart | Table
Spo094480.65Barchart | Table