Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATACCAAGAAGTTTCCTTCACATGAGAATTGTGAATTGAGAAGACTTCCTATGCCACCAAGGCACCAATAAGTGAAACCAAAAACCTTGTTTACGAATTTACGTGTACCAACAACTCTTTATTTTGGGCATGTATAAAAAACAATCAAAATATCAGATTTTTTTCTGGTACCAAAAACGTGTGCGTTCACCTTCGTGTAAACTCGTTAGGGTTTGCTCGAGCTTCAACAAATCTTTCTTCTTAATCCCTCTCCAATATTTTTTTCCCCAGCAATTGAATTCGCTAAACACTTGATCATATCACGACATTGATTATCCCCAATTCAATTCGAAAGATTTCTATCTAGAGTCGCAACCTAGCTGAATCCAAAATTTCCGGATTTTTTTCCCCAAGTGTTGTTGAATTTACATTCAAATTTCGTCAATCAAGATGCCGAATTTCCTGTCCACATTGAAAACAGTTGCAAGGAGCAGATTGCTGCGACATAACAATGTAAAACCATTTATTCGACATCGGAGTCGGACATTTGATGCCGGGGAGATTGGAAATTATGTTCCAGTACGATGTATGAGCAGCATTGCTGGAATTGATTGTTTTTCTTCTAGGAATTTGATTCATCGTCCTACGAATTCGTTCAATTTTAGTGAGAATTTGCAGAAGAGGGGGTTTATGGGAGTTGGAGATGGTGAAGAAGGAAATGCTCTATCTAAGGTTCATGAGGAAAACATTATCATTGGGTGAGTTTAATTGAACTTATTATTACATTTGATTTTACTATAAATTGAAGGATGCAATTGTTAATTGTTGGATGCATAAGATTTCTTTAGGGTTTATCTTGTTTAGAATGCTAAAACGTTTGCATTATTGTTGTGATGAAATATATCGGATGAATAATTGGGTTGTGAATTTTGAAGTAAATGAAGAGATGCTGGAGATCAATGTTTAAGCTGGGATATGATGTAATGTGCATGCTTTTCTTCTTTGCCATTTTTTTCATTTGAAGTTCTTGCTGTAAGGAAGAGTAGGCAATCTGTAAGTGCTTTACGATTGCGTTCTGTGTGAAATAATGCAATTGGTATAAGATCATTTACAGTAAAGCTGTGTATTAGGGTAAAATGCTGACAGAATATTAGTTGCCAATAGCTAACTTCTAGGGTAAAGCACTGTAAAGTAAAGCCTTTCTCATCATAGTTTATTTGTTCATTTCTTTGCATATCTATGATGTTTTATGGACTGAAGAATGAAATAAATCAAGATTATATTTTATAAACAGGTACTCCCCTGAGCAACTGTTTGCTGTCGTTGCAGCTGTAGATATGTATGAAGGTTTCTTACCTTGGTGTCAAAGATCAGAAATAATTCGGCATCATCCTGATGGATCATTTGATGCTGAATTAGAAATTGGTTTTAAATTTCTAATTGAGAGTTATGTTTCCCATGTAGTATTGAACAAGCCAAAGTACATTAAGGTACATTTTTCATTGCACCTAACTTCGAATTTCCTTATACTGACTGCACTTGCCCGTCTTTTTTGGGGGTTGTGATATTAATTGCCTTTCTATTCTGTGTGGTTTTGTTATAAACTTATAATTGAATATGCACTGTGGAAATACAATCTTACATGCACGTGGAAGACTCGATTTTTAGTGTTGACTAATGGGTCTATAAACTCTACATATGCAGTCCTAACTCTTAGTTCTGTGCAGCAATATTTTACGAGTAAAAATTGAGTTTTACTTATGATGCGTGGTTATAACGATTAGGCCTTTGGAACACTTTTATTTGTGAACTCATAGGGCCAAACCCGACCCCCGCCGTTCCAAATTATAACCTATCTGAATCTATAAGGGTGCGGAGTTGTTTTTGAGGAAGGATCAAAATAACCAGAGAAATGAGGTAGTAAGGAACTAAGGATTGTGGGCCCAAAGGAGAGCATATTGGGGACTCAGAGACGGGTGCTAGAGGACATAGTTCTGTTTTTTTTTTCTTTGGAATATGTTATTATTGCATGAATCCCCATATCTATTCCTTCCCCAGAAGTTACGAAGACACCTACCTAATACCCTAATAAGAGGGGATAGTTACATAAACTAGGATAAAATAGCTGGTCAGATGTCATGAAGGCTCGGATCTTTTCATATTTGAAGAGATGTACTTAGTTGCTTACTGTGGGATAGAAAATTTATTGGCCCTAAAGGGGTAAAAAATTTCAAACAACTGGCCCTGTTTGAATCATCTATGTCATGAGAATAAAGCATTGCTCCTGTTTGAGTCATCATTTATCAATCCATCCATACATCTATCTATTTATCTTTCTATACCTTGATGAGAGATCTATCTATGCCTTTTGTGGATAGAACATTTAGTTTCAGGTAGAAGTTAGTTGTAAAATGAACTCTTTGACCCTGTTTGATTGATATGTACTGATATGTCTTTGTTTATAATACTTTCAGACCACTGCATCTGAAAGCAACCTTTTTGAACACTTGATCAACGTATGGGAATTTAGGCCAGGACCAACTCCAGAAACATGTAACCTTTATTTCTTGGTTGATTTCAAGTTCCGTTCACCTCTTTACCGGCAGGTTATTACCTTTCTTTCATTTTATTCTGCTTGTTAAACTTGTTTAGGAATTAGAACTTCATTTGTTCCAAAAGAAAGCGGAATTGTCACACCTATATTTGATTGTGATGAAAAACATAATGCTGCTGCCTAAAAAGGATAGTGTCTTCTTCTTTGCAGGTGGCATCAATGTTCTTTAGGGAGGTGGCCACTCGATTAGTCAGTTCATTCATTGACCGCTGCCGTTTGATATATGGGCCAGGGGCAACTATTGAGCAAAATGCATAGGATTTTGGAGTAAACTTGCCCCTCGTGATAAGTCAGCTCTAGGTCATCTCTGGAAATATAGTTGCATCAAGTGAAACTTTTAGGAGGCTTAATGCATGAAGTTGTAACCCTGCATCTCATTCTTTAGAATTTTGTTAGTCACAAAATTGTTTCTTGAAGTATTATGGAATTATTCTAAAAATATGAGGTTCAAAATCGAAGCTTGTTAGTTGTTCAAAGGTGTATTCTTCGATTCTTTTCCTTTGGCTGCTGAGACTGGAATGAACTCCTGTCAAGGCTTCTGAATTCTGATGTTCACAGGCAAAAAGAAAAAGAAAAAAAAAAAGTAAAATTGGCCTCAATCACACCAACAATGACTCAGATGCAGAGAGTAGCACAACCTTAAACCGTTAAACGGGTACACTCAGCAGGACAAACTATATAGTTAGGGTGCAATGTGTGACATATGTGAC AAAATACCAAGAAGTTTCCTTCACATGAGAATTGTGAATTGAGAAGACTTCCTATGCCACCAAGGCACCAATAAGTGAAACCAAAAACCTTGTTTACGAATTTACGTGTACCAACAACTCTTTATTTTGGGCATGTATAAAAAACAATCAAAATATCAGATTTTTTTCTGGTACCAAAAACGTGTGCGTTCACCTTCGTGTAAACTCGTTAGGGTTTGCTCGAGCTTCAACAAATCTTTCTTCTTAATCCCTCTCCAATATTTTTTTCCCCAGCAATTGAATTCGCTAAACACTTGATCATATCACGACATTGATTATCCCCAATTCAATTCGAAAGATTTCTATCTAGAGTCGCAACCTAGCTGAATCCAAAATTTCCGGATTTTTTTCCCCAAGTGTTGTTGAATTTACATTCAAATTTCGTCAATCAAGATGCCGAATTTCCTGTCCACATTGAAAACAGTTGCAAGGAGCAGATTGCTGCGACATAACAATGTAAAACCATTTATTCGACATCGGAGTCGGACATTTGATGCCGGGGAGATTGGAAATTATGTTCCAGTACGATGTATGAGCAGCATTGCTGGAATTGATTGTTTTTCTTCTAGGAATTTGATTCATCGTCCTACGAATTCGTTCAATTTTAGTGAGAATTTGCAGAAGAGGGGGTTTATGGGAGTTGGAGATGGTGAAGAAGGAAATGCTCTATCTAAGGTTCATGAGGAAAACATTATCATTGGGTACTCCCCTGAGCAACTGTTTGCTGTCGTTGCAGCTGTAGATATGTATGAAGGTTTCTTACCTTGGTGTCAAAGATCAGAAATAATTCGGCATCATCCTGATGGATCATTTGATGCTGAATTAGAAATTGGTTTTAAATTTCTAATTGAGAGTTATGTTTCCCATGTAGTATTGAACAAGCCAAAGTACATTAAGACCACTGCATCTGAAAGCAACCTTTTTGAACACTTGATCAACGTATGGGAATTTAGGCCAGGACCAACTCCAGAAACATGTAACCTTTATTTCTTGGTTGATTTCAAGTTCCGTTCACCTCTTTACCGGCAGGTGGCATCAATGTTCTTTAGGGAGGTGGCCACTCGATTAGTCAGTTCATTCATTGACCGCTGCCGTTTGATATATGGGCCAGGGGCAACTATTGAGCAAAATGCATAGGATTTTGGAGTAAACTTGCCCCTCGTGATAAGTCAGCTCTAGGTCATCTCTGGAAATATAGTTGCATCAAGTGAAACTTTTAGGAGGCTTAATGCATGAAGTTGTAACCCTGCATCTCATTCTTTAGAATTTTGTTAGTCACAAAATTGTTTCTTGAAGTATTATGGAATTATTCTAAAAATATGAGGTTCAAAATCGAAGCTTGTTAGTTGTTCAAAGGTGTATTCTTCGATTCTTTTCCTTTGGCTGCTGAGACTGGAATGAACTCCTGTCAAGGCTTCTGAATTCTGATGTTCACAGGCAAAAAGAAAAAGAAAAAAAAAAAGTAAAATTGGCCTCAATCACACCAACAATGACTCAGATGCAGAGAGTAGCACAACCTTAAACCGTTAAACGGGTACACTCAGCAGGACAAACTATATAGTTAGGGTGCAATGTGTGACATATGTGAC ATGCCGAATTTCCTGTCCACATTGAAAACAGTTGCAAGGAGCAGATTGCTGCGACATAACAATGTAAAACCATTTATTCGACATCGGAGTCGGACATTTGATGCCGGGGAGATTGGAAATTATGTTCCAGTACGATGTATGAGCAGCATTGCTGGAATTGATTGTTTTTCTTCTAGGAATTTGATTCATCGTCCTACGAATTCGTTCAATTTTAGTGAGAATTTGCAGAAGAGGGGGTTTATGGGAGTTGGAGATGGTGAAGAAGGAAATGCTCTATCTAAGGTTCATGAGGAAAACATTATCATTGGGTACTCCCCTGAGCAACTGTTTGCTGTCGTTGCAGCTGTAGATATGTATGAAGGTTTCTTACCTTGGTGTCAAAGATCAGAAATAATTCGGCATCATCCTGATGGATCATTTGATGCTGAATTAGAAATTGGTTTTAAATTTCTAATTGAGAGTTATGTTTCCCATGTAGTATTGAACAAGCCAAAGTACATTAAGACCACTGCATCTGAAAGCAACCTTTTTGAACACTTGATCAACGTATGGGAATTTAGGCCAGGACCAACTCCAGAAACATGTAACCTTTATTTCTTGGTTGATTTCAAGTTCCGTTCACCTCTTTACCGGCAGGTGGCATCAATGTTCTTTAGGGAGGTGGCCACTCGATTAGTCAGTTCATTCATTGACCGCTGCCGTTTGATATATGGGCCAGGGGCAACTATTGAGCAAAATGCATAG MPNFLSTLKTVARSRLLRHNNVKPFIRHRSRTFDAGEIGNYVPVRCMSSIAGIDCFSSRNLIHRPTNSFNFSENLQKRGFMGVGDGEEGNALSKVHEENIIIGYSPEQLFAVVAAVDMYEGFLPWCQRSEIIRHHPDGSFDAELEIGFKFLIESYVSHVVLNKPKYIKTTASESNLFEHLINVWEFRPGPTPETCNLYFLVDFKFRSPLYRQVASMFFREVATRLVSSFIDRCRLIYGPGATIEQNA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11507.1 vs. NCBI nr
Match: gi|902240048|gb|KNA25852.1| (hypothetical protein SOVF_002770 [Spinacia oleracea]) HSP 1 Score: 511.1 bits (1315), Expect = 1.000e-141 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Spo11507.1 vs. NCBI nr
Match: gi|731367579|ref|XP_010695686.1| (PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 431.4 bits (1108), Expect = 1.100e-117 Identity = 204/247 (82.59%), Postives = 221/247 (89.47%), Query Frame = 1
BLAST of Spo11507.1 vs. NCBI nr
Match: gi|731358846|ref|XP_010690968.1| (PREDICTED: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 412.1 bits (1058), Expect = 6.600e-112 Identity = 192/247 (77.73%), Postives = 220/247 (89.07%), Query Frame = 1
BLAST of Spo11507.1 vs. NCBI nr
Match: gi|870848230|gb|KMT00519.1| (hypothetical protein BVRB_9g218170 isoform A [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 386.3 bits (991), Expect = 3.900e-104 Identity = 179/232 (77.16%), Postives = 205/232 (88.36%), Query Frame = 1
BLAST of Spo11507.1 vs. NCBI nr
Match: gi|697170919|ref|XP_009594383.1| (PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Nicotiana tomentosiformis]) HSP 1 Score: 318.5 bits (815), Expect = 1.000e-83 Identity = 156/257 (60.70%), Postives = 196/257 (76.26%), Query Frame = 1
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3Z7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002770 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 7.300e-142 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC25_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g126580 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 7.400e-118 Identity = 204/247 (82.59%), Postives = 221/247 (89.47%), Query Frame = 1
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BKC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g218170 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 2.700e-104 Identity = 179/232 (77.16%), Postives = 205/232 (88.36%), Query Frame = 1
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Match: K4BUX3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.700e-83 Identity = 157/251 (62.55%), Postives = 192/251 (76.49%), Query Frame = 1
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TNQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G212100 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.300e-82 Identity = 151/254 (59.45%), Postives = 193/254 (75.98%), Query Frame = 1
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Match: CQ10X_DANRE (Coenzyme Q-binding protein COQ10 homolog, mitochondrial OS=Danio rerio GN=zgc:73324 PE=2 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 1.400e-29 Identity = 59/150 (39.33%), Postives = 96/150 (64.00%), Query Frame = 1
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Match: CQ10B_DANRE (Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Danio rerio GN=coq10b PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.100e-29 Identity = 72/189 (38.10%), Postives = 107/189 (56.61%), Query Frame = 1
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Match: CQ10B_HUMAN (Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Homo sapiens GN=COQ10B PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.800e-28 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Match: CQ10B_PONAB (Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Pongo abelii GN=COQ10B PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.800e-28 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Match: CQ10B_RAT (Coenzyme Q-binding protein COQ10 homolog B, mitochondrial OS=Rattus norvegicus GN=Coq10b PE=2 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 7.800e-28 Identity = 62/152 (40.79%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of Spo11507.1 vs. TAIR (Arabidopsis)
Match: AT4G17650.1 (Polyketide cyclase / dehydrase and lipid transport protein) HSP 1 Score: 275.0 bits (702), Expect = 4.500e-74 Identity = 136/254 (53.54%), Postives = 183/254 (72.05%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11507.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11507.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11507.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11507.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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