Spo11535 (gene)

Overview
NameSpo11535
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_27 : 2979703 .. 2981982 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATCGGTTGAAGTTCCTTAGTAGAAGAGAGACCAGTAAGGCTTTGAACAAGAGCCATGAAATTCCGAGGTTGAGTATGAATGATCTTTGGCGATGTAAGATAAATAATGACTGGATTATTACCTTTACAACCTGTTTGGTAACGTCTTTTCTTTGGAGTATGTTGATGAGACGAGTAAGAAGGTTTTTGTATGGTTAAAGGTGAAGGGCGAGGACCATGAATGATGGGGAATGTGTGATTATGAATGAAAGATTTTGTAGGGCTCATGATGTTATGTTTAAAAGGGGTTATGGTATAATTATGTTATGTATAAATGTAATTAATGCATTATGGATTTATGGGCATCATGGAAGAGATTATATAGTGAACATTTGAATAATTTAGGTTGAATTTGGTTGTTGAATTTGAGAATTGAGAGCCTCATGTTGCTGACCGTTGACTATTGATGGCATACAAAATATTGGTCAAAACATCTAAGTAATTTAATTAAATATTGCAGCAATCTAAATGTTTTTTTTATTGTTTTTTTAAATCTCCCGCGCGCTAACTTCCTTTTCTTTAAATTTCCATTAATCAAATTAACATGGGATAATGATCTCCTTTAGTGTGGGACGGCGGCACGGCGTTCTTACCGCAACACTGAAATATTGGTCTACTTGTCTTATATGCACTTGATGCGGCAAATATAAGAAATAGATTTTGGTATCATATTTAAATCTGAAATAAAATGCAAAAAATATAATATAAATGTGATACGTACAAATATAAGAAACATATAAGGTAGATAGAGCCGAACGCATATAAACAGATAGATTAAAATTGTAAGAATTTATTTAAGGGGATAAATTAATTAAAATGTTTCTTTGGGTTTTTCCTATTGGGTAGGTTGTCATTATACTCTCTATTCTATAAGTGTAGATGATATTTTAGTAATTCAAGGGGGACACCAAAAATGGATTTACTAAAATAACCTCACATATTCACTTATATAATAGAGATACACTAGTATTGAAGCCCGTGCGATGCACGAATTTCATTTAATTTTTTATTATTAATTACTTTACACTTGTGTTATTAGGTGGCATTTCGGGTAATGCACATGTTAAGTTTAATTTTTTGTGTAAGCATGAGTTTCGTTTTTTTTTGCGTGTATTTTCCCTAATCACCTAATTAACATAATACACAAAATTTTGGGAACAAAATAAGAAATCGAAGTGGGTAAGTGAAATAAACTTATTATGAACAATTATTATTACAATTAAATCTTACAACCTTTAAAAGCAAGGAGTTGGTTTTCACTATTCATGCAATAGCGTGATGACTAAAACGTCTTACAACCTTTAAAAGCAAGGAGTTGATTTTCACTATTCATGCAATAGCGTGATGACTAAAACGCCCTTAAATTTCTAACATTTATCGTTTGTGCCCTTAATTTCAGCCGTTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTTCCCTAACCCTTTCCTCCTCCTTTTGCTTGCTTTCCCTTTTCTCTTTCCTCTTGCTTTTCTTCTTCAGCATACTCTCATCTGCCATCTCACATGGCAATTTTTTCGGCCACACAATTCACGAATGAAGGGAGGTTGGATCTATCAGATTAAGAAATTAGGGTCTAATTCAAATATCGCAAAGATCCTCCGCCTCTGAATGGTAAGCTCTTCAGATTTGAATAAATTGTTACCACTTTCAATTGTTTTAGGATTTTAGCGGATTTACCAGCTTTTTCTTCAATATATTTGTTTAATTTGGTTTTGATTAAAGTGTTAATATGAATTATGGTTTGTCTTTCTCTCGAGGTTTCTCTTTCTCTCTCCTCTTTCTGTTCTTCGTGGATTGTAGTTTTTTTTTCTTCTCAATTACGGAAGTTTCTTGATGTTCTAAAGTTAAGGTTGTGTTATATAATCTGATTGTGGATCTCTTGAGCTTGAATTTGATATGGATTGCGTTTTCTAGGGTTTCTACTTCTACATCTTTTTCACTGGTTGATGCGGCGGTGAAAGTAAAGGACCTTCAAGTTCAGTCTATAAGGATAAATTACGCTCAGAAACCCTCGCTCTCCCCAAGCCAAGGTTTCTCTCCTTGAATCTCTCACTTTCTCCTCTATTGATTAGGTTATCAATTTTGAAGCTAGGGTTTTGTTTGATTGGATATTTGATTTGGCATAGGCGAACGTTTTAAGGTTCCAGTTCATTTTGTTCCACATTTCTGGGAGATTTTGTCCCGTTTTTTTGCGTCTTCGTGTCCACCATAG

mRNA sequence

ATGGCCAATCGGTTGAAGTTCCTTAGTAGAAGAGAGACCAGTAAGGCTTTGAACAAGAGCCATGAAATTCCGAGGTTGAGTATGAATGATCTTTGGCGATGTAAGATAAATAATGACTGGATTATTACCTTTACAACCTGTTTGGGTCTAATTCAAATATCGCAAAGATCCTCCGCCTCTGAATGGGTTTCTACTTCTACATCTTTTTCACTGGTTGATGCGGCGGTGAAAGTAAAGGACCTTCAAGTTCAGTCTATAAGGATAAATTACGCTCAGAAACCCTCGCTCTCCCCAAGCCAAGGCGAACGTTTTAAGGTTCCAGTTCATTTTGTTCCACATTTCTGGGAGATTTTGTCCCGTTTTTTTGCGTCTTCGTGTCCACCATAG

Coding sequence (CDS)

ATGGCCAATCGGTTGAAGTTCCTTAGTAGAAGAGAGACCAGTAAGGCTTTGAACAAGAGCCATGAAATTCCGAGGTTGAGTATGAATGATCTTTGGCGATGTAAGATAAATAATGACTGGATTATTACCTTTACAACCTGTTTGGGTCTAATTCAAATATCGCAAAGATCCTCCGCCTCTGAATGGGTTTCTACTTCTACATCTTTTTCACTGGTTGATGCGGCGGTGAAAGTAAAGGACCTTCAAGTTCAGTCTATAAGGATAAATTACGCTCAGAAACCCTCGCTCTCCCCAAGCCAAGGCGAACGTTTTAAGGTTCCAGTTCATTTTGTTCCACATTTCTGGGAGATTTTGTCCCGTTTTTTTGCGTCTTCGTGTCCACCATAG

Protein sequence

MANRLKFLSRRETSKALNKSHEIPRLSMNDLWRCKINNDWIITFTTCLGLIQISQRSSASEWVSTSTSFSLVDAAVKVKDLQVQSIRINYAQKPSLSPSQGERFKVPVHFVPHFWEILSRFFASSCPP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11535.1Spo11535.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo11535.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo11535.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo11535.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo11535.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo049850.66Barchart | Table
Spo262880.65Barchart | Table