Spo11578 (gene)

Overview
NameSpo11578
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransducin/WD-40 repeat protein
Locationchr6 : 8312490 .. 8320477 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATCAGTTTGGCGCAATTGCAAATTTTTCCTCTTCTTTCTACATTTTAATTGCCGCTATTACAATTTTTTCCTTTTTTTTTTTTCAGCATCTTTTGGCCCACTTTAAGGGAAAGTATTATTTTATTGTGGTTATACCATTTAAATGGTAAGACTTTCTCCCCAAACCCCTGTCTTCAGTATCTTGGTGAGGGCGTCCTTCGTGCGTTCTGTGTTCCGCCCCAACCCACAAGCTAAGGTCATTATTTGCTCTAATTTCTCTAATTTATTGCTTAATTTGTCAAAAAAATTGCTTCTTGTTGTATTAATTCAGTAATTTAATACTCCAATGTTATTGCTCGAAATTGAAATTGGGAAGATGCAATTAATTTTTGTACGTAGTATTACGTTTTTCATTTCCGGGGTAATATATATTTCCAAGTTCTTCTTGCTGGGTTCATAATATTTTGGCTTAATGTTGAAGAAAACATTGGGATTTTATTATTGTTAATTTTGTTTTCTGGGTTTTTCTAGTAAAGTTTAATTGGGAACTTGACAAAAAAAAACTGTATTTGATGTTGTTATGTTAGCTTTTAGACTGTGAAAGGTCTCAAATTTTGACGTTTGAAGATGGTACTTTTGACAAATTAATGATTTGTATAGGATACTGAATTACTGATACACATCATAGCATAGTGATCAAATCATTGAAAAGGGGGTATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGTAAGTGATTTCCCTTGGTTCCATTTCTATGGTGGTACTTGAAATTAGAGTTATGTCCCTCATTTTGTGGTTTAATTTCATGTAGGCATCGTTATGCTGCTGAGGCGGAACCACAACGGTAAAGTTTCATATACTTCGAATTTATTGACTCTAATATGTGTGTTTAATGTTCGAAATGCAGTCCGAAAAGGAGGGGGAGGGGTTCGTGTTGTTGTTATGTCACTCTTGTGATTTTCTTTTAAAGCACTGCAAAAGGTAAATTTTGTAGGATGATTTTGATTGCTAAACTTGCAGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGGTAATCCATTCCTTCCTCCTATCCCCCCCCCCCCCAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCCCCCCCCCCCCAAAAAAAGTGTTGTGTTTGTATTCCTAGAAGGGAAGTGAGTGGCTTTTAAGTTGGTTGTTTGCGGTGGTGTCAGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACGTGAGTCGTTTGCTTCAAATTATTGAACTTTGTGTCCTGTCACAAACTAAAGTATTTCTATTGTCTAGATTCTAGAATGTAAATCATAAAATTATATTTTTGACGTGTATGGGGTGGGGGTGCTGTTTTCTTTTGAGAAAAGAATTTTCTGTAGTTCCTTATTTTTAAGTTGAACTTATTGCAGAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTTCAGATACACCTTACTTTGTTATATTTTCATTTTATTATGTTCACATCTGCCAGGATATTTTTGTTTCATGATGCCTATTTGGGGGTTGAGGTTGATAAACTTCCCCAAGGTTATGAAGTGCTGCTGGCCAGTAGGCAGTGGCCCAGTGCACATAAGGTGTTGAACAAAGGTTTATTTGTTGTACAGCAGAGGTCAATTGACCTCTGTTGATTTAATAGTTCTCATAAGTGTTTGGCGCATATTTTTTCATGAATATGTTTGAATGAGGAATCAAATCACAGTTTGTGGCTATTGCATTGCATTTAGGAAGCAACTTGTAGAGGATTTGTTACTGCGAAAATGGGTCTTTGAATTGAGTTTTACGGTTCTACTTAGTTGAAATCTAGTGTATCCTGCTTTCATTTTGACATTGAAGATTATTATCTGTTAAAAGGCTAGGTTTTTTTTTTAATTCAGAATGGTGTAAGATACTAAGATATGTTCCAGAACGTAAAAGACTGTGGAATGACATATTCTGTCGCCGAGGGCCAGAGGAGATAAAATTTACTAAAAAGGCAAATCTTATTTTGCTTTCTGTTATGCACTTACGCCTACTCAACAGTCAACACGCTTAAGGCATTTTGTCGTGCTATGGATTCCAACCGTATGTTTCATTTCTCTTGGGCGTTGCTTCTGGAGAACCAAGCTATATGCTAACTGAGGAATGAGAACAAAATTAGACTGAGGGAAGCCGGACACTGTTTACCCGTGGAGTGTAGGCGTGTAGCGTAGAGGCCCAAATTAATTAGTATAAAATTTCCCACTTGTTTGAATGAAGATGGCTTAATACAGTATATACTAGCTTCTATAGATTTCTTTTTGCCTTTTGCTTCCTATTTCTTTCTGATGCATTTGATCGGAGTTTTGGAGGCACAATGGAAAGGTTCTAGTAATCATGCAAGGGCAGGATAGCTAAGTGGTATCTGGCGGGAAATTCTAAATTCCTCATTCCCTTCTCCCCCTTGGCATACTGAATTGAGATTATTTCCAGTCGCTTGACTTCTGATTCCACCTGCCATCCCATGTCCCCCTTTAAGAAGGGCAAATACATCAGAAAACCACTGAATTAGCTGAGACATTGATCTGATACCCCCCTCCCGTACACCTTTTTGTTGTTCCTGATTCACTGGATGAAATTAAACTTGGACCAATTTACTTACAAGCTGCTATAGTGAATTTTTCTTTGGCTTCATCATGTTCACATTTCATCATATTTCTGTGCATAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGGTAATCAACTTTTTCACATACCTTGATATAGTTGGGATGTGGGATGTTTGTTGTGGTTTTTGCAACTATACATGCGAACAAGCTCCTGTTTAATGCCCTTTCCTTCTATCTCAAAAACTATTTTGTGCAAAAAGACAGCATATCTTAAATTACTATTACTCTCATTTTTGTAAGATATTTTGTTTAGTGCTACTTCCCAAAGAAACATAATGCAATTATGGAGTTCACTAGCCCAGTCTCTTGGATTCTACAGAGCTTGGGGGGTTAGGGTGGAGGATAATTGACTCCAATGATGCCAAGGAAAATAAGCTACTGCCATACAAAGTGATCAATCTGTACTACCGTATGAAATTTATGAGCATATTTTGCATGAGAAAAGACTTAGCTAGAAAAGAGAGGGGGGGAGGGGGGATGTAAAGGCTAAAAGCAACAATAACCAAGTGCAGTTAGATTCTGGAATGGAAATCAGCATATCTTTTGTTCATATGTATGTCGGATTATGTTGCAAGTCTTCATGTTATTTATGTACTGAGTCTCACACTCTCACATGATTTCATTTGGTTTTCTAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTATTGTGGCTGACTAGTTATGTTTTTGTTCTAGTTTGATGTTTACACTGAGATATTTGTATGTCTACTTTGCTGTTTTATGATTTTTGCTGGAGTTTTATTCCTTTATGCTTGTTGATGAATGGAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGGTACTTATTATGGTTGATTTCTTTTTTCTAACTTCATAATCTTTCTGGCTCTGCTTCTCTTGTGTTGTGGCAGCCTGTATTGGTGTTTCGGTTTTTGTCCTGCTGAATTATAACAATGCCCCGGAATGGAAATATTCCTTCTCCTAATGATTACTCCTCCCTTCTGTTTTCCGGTGGCGTCATGTATGTTTTAAAAGTTTCATGCTTCTGCAGCTTTTTGGTGGTTGCATGCTTGCATCTAGAAAATAATGTCTTGAGCTTACGTTTGATCAAAAATAATAAAAAAGACTATATTGAATAACTATCATCAATGTGCTAATCCGCATAAAATAAACGACTCAAACTTTGGATATAAGATTTATGTGGCTTTCCCGCTAGCTGGCTTGGAGAGAGACTATGGAAGGTAAAATAACAAGAAAGTTACTTTCTCTGTTTTTTAGTACTCGCAACGCTTGGTCTTTTGACGCTATTCACGTATTCTACTTTGATTATTGTTGGTTTTTTATATGTAAGATAAAACATAGTCATGTGCGATCTTGTTAGATTCGTTTCAATGTGCATTTTCAAAATATCAACTTTATACTTCATTTTTTTAATTGCAACATTTGAGATTTCACGCTTGCCAATGCACTAATTTAACCACTAATATCTCTCATTATACATTTTAAAAAATTATAAAAATTTGATAATTTGAAAGTATATTTCAAGACGAATCTAACAAGATCCCACATGAATATAGTTTTCCTTGCATATAAATCACAAAAAATAACTATATAAGAATATGTGAATAGTGTTAAAACCAAGATGCTGCAATTATTAAAAAATGGAGGAAGTATAATTTTTGCTTAAAGAAATTAAAGATATTAATGATCAAAGTTGTGCATTGGCATGCATGAAAGTGACCAAGGTTGCGAATAAAAACGAATGGAAGAAGTATAATTTATTTGAGGATTAAGAAAACATGATGGTAAAGTACTAATTACAAACAATAGATATTGTCTAGCACTTAAAACACGTCCATAAGACCTCTAAGCACTTATTGTAAGCGATCTGAAGGCAAAGAAGAGCCACGTGGAAATTCCTCTTCCCCCTTTGCACATAACCTACATCTTTTTTTCGAAGGCAATGTGAATAATTTAATTCTTGAGTCCTTTTTGGTTAACTCTTAACTGTGAGCTTGTCCTCTCAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGGTATGCTTTTTCATGCTTGATGGTGTAGATTTTCTAGTAGATGTTTTAACGCAATATTAGGATTATTATCATATTTATATCTATCTTCAAGAAACTAGGCATGGATTTGGGTTCCTTCTCTGAGTGTCTCTTCTTCATGATGACCTCTCTATGTTCTAAGATTAGGGATGCTTTCTCAATTATGGTTTATTTCCTTCTGTTTATTTTGTGTATGTGTTTGGACAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGGTGAATCTTACACTATGCAAGACACCCCTTTCATTTCTGTTCTTCTAATTGGCTAATGTCGCGCTAACTTCTTGTCCTTTCTTCTGATATCAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGGTATATGATAGGCTTCTTTGGACCCCCTTCTGTGGAAGTTGTGGCATGACATAGGGATTTCATATTTTGACGTACTGAATTTGGCTTTATTGCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGGTATGCTAGAGATTATCAAAAAGCTAGATACCTCTTGGATTTACTTATTGTTAGAACATCTTTTCTTAGTTAACAGATATTATTTTTCAATTAATTTGTGTGTGTGTGTGTGTTTTAACCGGAATGTACTCCTTTAATTCGAAATCAAATAGTTACATTGTCAAAATTCAACGAAAGTAGTGAATTAAGGATCTACCTTGGTTTCCCTGAAACACCCTTAATTAAGTGTGGGTATTTCGGAAATCTGAACATGACCTATTTCTATATGAAATGGAACCTTTTTTCTAGACATCCCAGAACAGTATATCGATTATTAATTTTCCATTCGGAAAGAGCAATTGATAACGAAAACTAAATTTGGTTTGCAGATTTTTTTGCAACCTGTTGAATTTTGCAGTTTCCAAATTTGCTGTATCCTGTGGCAAATAACTCTTATTTAACTAACATATGATTTGTGATTGGTCTTGTAGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGGTTCAAACTCTTCCTTTGTCAACATCTTGTTTTACTTGAATAGCTTTTATTTATTGAAAAATGCCATTTTTTTTGGACGGAATGAGCCAGCAAGAACAATACAAAGGGATTCAAACGTGTGCATGCCTGACAAGTATCTTAATTTGATTGAAATTCCAAGTCCATAGATTTGATTTGTTTCAAATTTAAATCTTTGTTTTTGACTTTTTGTCACACTCAGAACCATAACACAGAACCATAACACAGTTGCTTTACATTTTTTTTTTTACCTTCGCCAGCTTTACTTTTTTCTGGTGTTTTCTCTGGAGTAATTTAGTTTATTACATTGTAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACGCATAGCCAAATTTATAACTTACCTTTGTTTCTGCACTTTTTTGTTAAATTTGTTGAAGAGCAAAGCTGTATTACTTCATAACTAGTTTCACGGGATAACATCATAAAAGACACTAGCTGTGAATGGTTTTCGTTGGTCTTGGTACCTTTTTAACTTTCTTTGGAAGACAGAGTTCAATTCGCAAAAAACGCACATAATGTTTTGAACACACTAAAAACTCTTCACCTTTTTTTCAGCCAGGCTGACATGAAACTGCATCTCCCACACTGATTGGGATCTTATGGATGCTTAAACCTTTTGTGTTATGGATTATACATATGGAGTATGAAATTTGATAAATGTCCCTCGATGAAATAACTATAAATTATTGAAACAAAATAGTGAAAAGACATTTGACTATCCAGAGCCAAAGTCGCTACTTCAGTTTTTCCTTTTTCTTACTTCTTTCTCGATTGCCTGTTTGGGGCAACCGTTAGTTCACAATGTCTTCTGCCCGACTACATGGTCCATACATCAGAATTCCAATTTTTTTATTTGTGTGTTAATTGTTAGGTGTGTAGTTATAGTAATCCACTGACTTATTAACAAATTGCATTGTCTATGTTGTAAACACTATATGGATTTTTTCATGCCTGTATTCATTTTTGTTTGCGCATCCTTTTGCTTCCGTCTTTTTACCAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAACATGTTGCACGTACTGTTGAGTGTATCCCATGTCGCAGGTATCAATCAGTGAAGGTGAAGGTGAAGGTTGCAGCACTTGTGTTCAGATGGTGTTTTTGATTATTTATCTAGACAATTTAGTTTTGGTTCTTATGGTCATTTTTGTTTACAAATATGGTGCATCATGCTCCATGTAGTTATTTATAAATGTTTTACTTAGCCATTTTGTTTAGGTTTTATGATAATTTTCTTACAATTGTCGCCGAATTTAATACTGGGACATAGGGAGTACTAGTTTTATTTTTCTCTCATGATTTTTTTAGAACTCATATGGTTTAGCCAGGGTAATACTTCGTACTACTCCCTCTGTCCCTTAATATTTGATCTGTTTTGATCGGACACGCTTGCTAATGCACAACTTTGACCACTAATTTCTTTA

mRNA sequence

GAAATCAGTTTGGCGCAATTGCAAATTTTTCCTCTTCTTTCTACATTTTAATTGCCGCTATTACAATTTTTTCCTTTTTTTTTTTTCAGCATCTTTTGGCCCACTTTAAGGGAAAGTATTATTTTATTGTGGTTATACCATTTAAATGGTAAGACTTTCTCCCCAAACCCCTGTCTTCAGTATCTTGGTGAGGGCGTCCTTCGTGCGTTCTGTGTTCCGCCCCAACCCACAAGCTAAGGATACTGAATTACTGATACACATCATAGCATAGTGATCAAATCATTGAAAAGGGGGTATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGCATCGTTATGCTGCTGAGGCGGAACCACAACGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAACATGTTGCACGTACTGTTGAGTGTATCCCATGTCGCAGGTATCAATCAGTGAAGGTGAAGGTGAAGGTTGCAGCACTTGTGTTCAGATGGTGTTTTTGATTATTTATCTAGACAATTTAGTTTTGGTTCTTATGGTCATTTTTGTTTACAAATATGGTGCATCATGCTCCATGTAGTTATTTATAAATGTTTTACTTAGCCATTTTGTTTAGGTTTTATGATAATTTTCTTACAATTGTCGCCGAATTTAATACTGGGACATAGGGAGTACTAGTTTTATTTTTCTCTCATGATTTTTTTAGAACTCATATGGTTTAGCCAGGGTAATACTTCGTACTACTCCCTCTGTCCCTTAATATTTGATCTGTTTTGATCGGACACGCTTGCTAATGCACAACTTTGACCACTAATTTCTTTA

Coding sequence (CDS)

ATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGCATCGTTATGCTGCTGAGGCGGAACCACAACGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAA

Protein sequence

MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSSTVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11578.1Spo11578.1mRNA


Homology
[Close]
BLAST of Spo11578.1 vs. NCBI nr
Match: gi|902210534|gb|KNA16466.1| (hypothetical protein SOVF_088990 [Spinacia oleracea])

HSP 1 Score: 709.9 bits (1831), Expect = 2.200e-201
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI
Sbjct: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS
Sbjct: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS
Sbjct: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL
Sbjct: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
[Close]
BLAST of Spo11578.1 vs. NCBI nr
Match: gi|731370590|ref|XP_010665768.1| (PREDICTED: WD repeat-containing protein 55 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 614.4 bits (1583), Expect = 1.300e-172
Identity = 308/360 (85.56%), Postives = 331/360 (91.94%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINL  LPFD+DFHPSDSLVATGLINGYLLL+RYAAE EPQRL+KVRAHK+SCRATRFI
Sbjct: 1   MEINLGSLPFDIDFHPSDSLVATGLINGYLLLYRYAAETEPQRLVKVRAHKESCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G AIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HKGCAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCS+RSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSVRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFSHDKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSHDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS SDS S  D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAASGSDSGS--DGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 354
[Close]
BLAST of Spo11578.1 vs. NCBI nr
Match: gi|731324733|ref|XP_010673124.1| (PREDICTED: WD repeat-containing protein 55 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 612.5 bits (1578), Expect = 4.900e-172
Identity = 306/360 (85.00%), Postives = 330/360 (91.67%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           ME+NL  LPFD+DFHPSDSLVATGLINGYL+L+RYAAE EPQRLLKVRAHK+SCRA RFI
Sbjct: 1   MELNLGSLPFDIDFHPSDSLVATGLINGYLVLYRYAAETEPQRLLKVRAHKESCRAARFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HEGRAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFS+DKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSYDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS    DS +D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAAS----DSGSDGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 352
[Close]
BLAST of Spo11578.1 vs. NCBI nr
Match: gi|747068320|ref|XP_011080913.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X2 [Sesamum indicum])

HSP 1 Score: 525.0 bits (1351), Expect = 1.000e-145
Identity = 259/353 (73.37%), Postives = 298/353 (84.42%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L  LPFD+DFHPSD+LVA GLI G LLL+RYAAE+ P+RLL+V AH +SCRA RFI
Sbjct: 1   MEIDLGKLPFDLDFHPSDNLVAAGLITGQLLLYRYAAESTPKRLLEVNAHTESCRALRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEG A+VTGSPDCSILATD+ETG  +  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 61  NEGHAVVTGSPDCSILATDIETGTAVVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ SCCN+F VH EYISDMTF SDSM+L+ TSGDGTLSVC++RSNKVQ +SEF EDE 
Sbjct: 121 DTRQGSCCNSFNVHEEYISDMTFASDSMKLVGTSGDGTLSVCNLRSNKVQTRSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPN VDALLK DEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRI+QPIAEHSEYPVERLAFSHDKK LGSISHD  LKLWD+++LLQGS 
Sbjct: 241 NGIISLVGILPNRIVQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLEDLLQGSG 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
               ++++A      SD+DNDGMDVD  +A  S+GTKRKN       +S+S+F
Sbjct: 301 NTIPDHSSA------SDSDNDGMDVDDSIAKPSKGTKRKNASKGQNFSSSSNF 347
[Close]
BLAST of Spo11578.1 vs. NCBI nr
Match: gi|747068318|ref|XP_011080911.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X1 [Sesamum indicum])

HSP 1 Score: 525.0 bits (1351), Expect = 1.000e-145
Identity = 259/353 (73.37%), Postives = 298/353 (84.42%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L  LPFD+DFHPSD+LVA GLI G LLL+RYAAE+ P+RLL+V AH +SCRA RFI
Sbjct: 11  MEIDLGKLPFDLDFHPSDNLVAAGLITGQLLLYRYAAESTPKRLLEVNAHTESCRALRFI 70

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEG A+VTGSPDCSILATD+ETG  +  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 71  NEGHAVVTGSPDCSILATDIETGTAVVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 130

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ SCCN+F VH EYISDMTF SDSM+L+ TSGDGTLSVC++RSNKVQ +SEF EDE 
Sbjct: 131 DTRQGSCCNSFNVHEEYISDMTFASDSMKLVGTSGDGTLSVCNLRSNKVQTRSEFSEDEL 190

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPN VDALLK DEDR++ GS 
Sbjct: 191 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 250

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRI+QPIAEHSEYPVERLAFSHDKK LGSISHD  LKLWD+++LLQGS 
Sbjct: 251 NGIISLVGILPNRIVQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLEDLLQGSG 310

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
               ++++A      SD+DNDGMDVD  +A  S+GTKRKN       +S+S+F
Sbjct: 311 NTIPDHSSA------SDSDNDGMDVDDSIAKPSKGTKRKNASKGQNFSSSSNF 357
[Close]
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAD7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088990 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 1.600e-201
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI
Sbjct: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS
Sbjct: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS
Sbjct: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL
Sbjct: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
[Close]
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9D7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g201680 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 8.900e-173
Identity = 308/360 (85.56%), Postives = 331/360 (91.94%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINL  LPFD+DFHPSDSLVATGLINGYLLL+RYAAE EPQRL+KVRAHK+SCRATRFI
Sbjct: 1   MEINLGSLPFDIDFHPSDSLVATGLINGYLLLYRYAAETEPQRLVKVRAHKESCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G AIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HKGCAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCS+RSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSVRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFSHDKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSHDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS SDS S  D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAASGSDSGS--DGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 354
[Close]
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP24_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063810 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.400e-172
Identity = 306/360 (85.00%), Postives = 330/360 (91.67%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           ME+NL  LPFD+DFHPSDSLVATGLINGYL+L+RYAAE EPQRLLKVRAHK+SCRA RFI
Sbjct: 1   MELNLGSLPFDIDFHPSDSLVATGLINGYLVLYRYAAETEPQRLLKVRAHKESCRAARFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HEGRAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFS+DKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSYDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS    DS +D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAAS----DSGSDGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 352
[Close]
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: F6HXL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08160 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 5.100e-136
Identity = 254/353 (71.95%), Postives = 288/353 (81.59%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAH-KKSCRATRF 60
           MEINL  LPFD+DFHPS++LVA GLING L L+RY A + PQRLL+V AH  +SCRA RF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 61  INEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKV 120
           INEG AIVTGSPD SILATDVETG+ IA LE++H AA+NR+INLTETTIASGDD G +KV
Sbjct: 61  INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 121 WDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDE 180
           WDTRQQSCCN+F  H EYISDMTF SDSM+LL  SGDGTLSVC++R NKVQ QSEF EDE
Sbjct: 121 WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 181 PLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGS 240
            LS+ +MKNGRKVICGTQ+G LLLYSWG FKDCSDRF+DLSPN VDALLK DEDR++ GS
Sbjct: 181 LLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGS 240

Query: 241 SNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGS 300
            NG+ISLVGILPNRIIQPIAEHSEYPVERLAFS D+K LGSISHD MLKLWD+D+LLQGS
Sbjct: 241 ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGS 300

Query: 301 STVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSS 353
            +  R+  A ++SDSD       MDVD      ++ TKRK    +NGQ  NSS
Sbjct: 301 GSTLRSQEAMADSDSDE------MDVD------AKETKRKT--ASNGQALNSS 339
[Close]
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: M0ZV95_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003462 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.500e-135
Identity = 239/354 (67.51%), Postives = 298/354 (84.18%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           +EI+L  LPFD+DFHPSD LVA GLI G LLL+RY A++  Q+LL+V+AH +SCR  RFI
Sbjct: 4   VEIDLGKLPFDIDFHPSDHLVAAGLITGDLLLYRYNADSPAQKLLEVKAHSESCRTVRFI 63

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSILATD+ETG++I  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 64  HEGRAIVTGSPDCSILATDIETGSEIVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 123

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC ++F  H EYISD+TF +DSM+LLATSGDG+LSVC++RS+K+Q +SEF E+E 
Sbjct: 124 DTRQRSCSHSFNAHEEYISDITFAADSMKLLATSGDGSLSVCNLRSSKIQTRSEFSEEEL 183

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ+GTLLLYSWGFFKDCSDRFVDLSPN +DALLK DEDR++ G  
Sbjct: 184 LSVVIMKNGRKVICGTQSGTLLLYSWGFFKDCSDRFVDLSPNSIDALLKLDEDRVITGCE 243

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPN+IIQPI EHSEYPVERLAFSHD+K LGS SHD++LKLWD++EL+Q S 
Sbjct: 244 NGLISLVGILPNKIIQPIGEHSEYPVERLAFSHDRKYLGSASHDHLLKLWDLNELVQDSE 303

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTG-GANGQTSNSSF 354
              +N+++A       D+DNDGMDVD ++  +S+G+K+KN   G +  +SN+ F
Sbjct: 304 DGAKNDSSA------EDSDNDGMDVDDNIPKSSKGSKKKNVNKGPDPGSSNNFF 351
[Close]
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_ARATH (WD repeat-containing protein 55 OS=Arabidopsis thaliana GN=WDR55 PE=1 SV=2)

HSP 1 Score: 465.3 bits (1196), Expect = 6.000e-130
Identity = 233/353 (66.01%), Postives = 288/353 (81.59%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L    F +DFHPS +LVA GLI+G+L L+RY +++   R  KVRAHK+SCRA RFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G+ IVT S DCSILATDVETGA++AHLENAH  AVN +IN+TETTIASGDD G VK+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC + F  H +YIS MTF SDSM+L+ TSGDGTLSVC++R++KVQ+QSEF EDE 
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ GTLLLYSWGFFKDCSDRFVDL+PN VDALLK DEDRL+ G  
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPI  H +YP+E LA SHDKK LGS +HD+MLKLW+++E+L+GS+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
             + N + A+E   DSD+DNDGMD+D+D + +S+G+KRK    AN   + ++F
Sbjct: 301 VNSGNASGAAE---DSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNF 349
[Close]
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_DICDI (WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum GN=wdr55 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.300e-55
Identity = 118/335 (35.22%), Postives = 198/335 (59.10%), Query Frame = 1 

		  

Query: 2   EINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFIN 61
           +I+   +PF ++FHP++ L+      G L L +Y+ + E +  L +R H+  CR   F +
Sbjct: 15  DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLD-ENEVKLSLRPHQSGCRQANFSS 74

Query: 62  EGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWD 121
           +G+ I T S DCS+   D+ TG+ +   E AH   +N +++  E  + +GDD G +KVWD
Sbjct: 75  DGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIKVWD 134

Query: 122 TRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPL 181
            RQQ+    FQ H ++ISD+T + D   + ATSGDG +S+ +     +   SE  ++E L
Sbjct: 135 MRQQNIVCEFQEHGDFISDITTIDDR-HIAATSGDGGVSIYNFVRKSMDDISEKSDNELL 194

Query: 182 SLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSN 241
           S   + NG+K++CG+Q G++L+Y     ++   +F    P  VDAL+K + +   +GSS+
Sbjct: 195 SCLSLDNGQKLVCGSQDGSILIYDRNNLENVK-KFAG-HPQSVDALVKVNNNTFFSGSSD 254

Query: 242 GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQ--GS 301
           GII  +G+ P +++  + EHS +P+ER+A S D + LGSISHD  LK W++    +   S
Sbjct: 255 GIIRFIGLRPKKLLGVVGEHSTFPIERMAISRDNRYLGSISHDFSLKFWNVASFYEEDES 314

Query: 302 STVTRNNTAASESDSDSDNDNDGMDVDSDLANASR 335
                 N  A+E ++D D+D+D  +++ D+ NA++
Sbjct: 315 EDADSANANANEIENDDDDDDDDDEIE-DIENATK 343
[Close]
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_BOVIN (WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.000e-52
Identity = 111/283 (39.22%), Postives = 160/283 (56.54%), Query Frame = 1 

		  

Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 46  FHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 105

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH A +N ++ + E  +A+GDD G +++WD R++      +
Sbjct: 106 KAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMDMR 165

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM    D   LL  SGDG L V +I+  + +  SE    +  S+ +MK GRKV
Sbjct: 166 QHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKYGRKV 225

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E  L AGS++G+I  V ILPN
Sbjct: 226 ACGSSEGTIYLFNWDGFGATSDRFA-LRAESIDCMVPVTESLLCAGSTDGVIRAVNILPN 285

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+E PVE LA SH    L S  HD  LK WDM +L
Sbjct: 286 RVVGSVGQHAEEPVENLALSHCGCFLASSGHDQRLKFWDMAQL 327
[Close]
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_RAT (WD repeat-containing protein 55 OS=Rattus norvegicus GN=Wdr55 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.600e-51
Identity = 108/283 (38.16%), Postives = 159/283 (56.18%), Query Frame = 1 

		  

Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 46  FHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 105

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH+A +N ++ + E  + +GDD G +++WD R++      +
Sbjct: 106 KAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIRLWDQRKEGPLMDMR 165

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM        LL  SGDG L V +I+  + +  SE    +  S+A+MK G+KV
Sbjct: 166 QHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKV 225

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E+ L  GS++GII  V ILPN
Sbjct: 226 ACGSSEGTIYLFNWNGFGATSDRFA-LRAESIDCMVPVTENLLCTGSTDGIIRAVNILPN 285

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+  PVE LA SH    L S  HD  LK WDM +L
Sbjct: 286 RVVGTVGQHAGEPVEELALSHCGHFLASSGHDQRLKFWDMTQL 327
[Close]
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_MOUSE (WD repeat-containing protein 55 OS=Mus musculus GN=Wdr55 PE=1 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 7.300e-51
Identity = 108/283 (38.16%), Postives = 159/283 (56.18%), Query Frame = 1 

		  

Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 47  FHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 106

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH+A +N ++ + E  + +GDD G +++WD R++      +
Sbjct: 107 KAIHILDVEQGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIRLWDQRKEGPLMDMR 166

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM        LL  SGDG L V +I+  + +  SE    +  S+A+MK G+KV
Sbjct: 167 QHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKV 226

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E+ L  GS++GII  V ILPN
Sbjct: 227 ACGSSEGTIYLFNWNGFGATSDRFA-LRAESIDCIVPVTENLLCTGSTDGIIRAVNILPN 286

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+  PVE LA SH    L S  HD  LK WDM +L
Sbjct: 287 RVVGTVGQHAGEPVEALALSHCGHFLASSGHDQRLKFWDMTQL 328
[Close]
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT2G34260.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 465.3 bits (1196), Expect = 3.400e-131
Identity = 233/353 (66.01%), Postives = 288/353 (81.59%), Query Frame = 1 

		  

Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L    F +DFHPS +LVA GLI+G+L L+RY +++   R  KVRAHK+SCRA RFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G+ IVT S DCSILATDVETGA++AHLENAH  AVN +IN+TETTIASGDD G VK+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC + F  H +YIS MTF SDSM+L+ TSGDGTLSVC++R++KVQ+QSEF EDE 
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ GTLLLYSWGFFKDCSDRFVDL+PN VDALLK DEDRL+ G  
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPI  H +YP+E LA SHDKK LGS +HD+MLKLW+++E+L+GS+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
             + N + A+E   DSD+DNDGMD+D+D + +S+G+KRK    AN   + ++F
Sbjct: 301 VNSGNASGAAE---DSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNF 349
[Close]
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-14
Identity = 72/293 (24.57%), Postives = 128/293 (43.69%), Query Frame = 1 

		  

Query: 10  FDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFINEGRAIVTG 69
           + + F+P+ +L+A+G  +  + L R   + +   +LK   HK +     + ++G  IV+ 
Sbjct: 57  YTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK--GHKNAILDLHWTSDGSQIVSA 116

Query: 70  SPDCSILATDVETGAKIAHLENAHTAAVNRIINLTE--TTIASGDDAGVVKVWDTRQQSC 129
           SPD ++ A DVETG +I  +   H++ VN           I SG D G  K+WD RQ+  
Sbjct: 117 SPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGA 176

Query: 130 CNTFQVHNEYISDMTFVSDSMRLLATSG-DGTLSVCSIRSNKVQAQSEFCEDEPLSLAVM 189
             TF   ++Y       SD+   + T G D  + V  +R  +     E  +D    +++ 
Sbjct: 177 IQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS 236

Query: 190 KNGRKVICGTQTGTLLLYSWGFF---KDCSDRFVDLSPNPVDALLKY----DEDRLVAGS 249
            +G  ++       L ++    +     C   F     N    LLK     D  ++ AGS
Sbjct: 237 PDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGS 296

Query: 250 SNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDM 293
           S+ ++ +      R I  +  H+   V    F   + ++GS S D  + L ++
Sbjct: 297 SDRMVHIWDTTSRRTIYKLPGHTG-SVNECVFHPTEPIIGSCSSDKNIYLGEI 343
[Close]
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT3G18140.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 6.900e-7
Identity = 43/156 (27.56%), Postives = 71/156 (45.51%), Query Frame = 1 

		  

Query: 41  PQRLLKVRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRI 100
           PQ ++   +H  +  A  F  + + + +GS D ++   D+   A     E    AAVN +
Sbjct: 68  PQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR--APGCQKEYESVAAVNTV 127

Query: 101 I-NLTETTIASGDDAGVVKVWDTRQQSC-CNTFQVHNEYISDMTFVSDSMRLLATSGDGT 160
           + +  +T + SGD  G ++VWD R  SC C      +  +  +T + D   ++A +  GT
Sbjct: 128 VLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGT 187

Query: 161 LSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVIC 195
             V  +   K Q  +EF   EPL      NG  + C
Sbjct: 188 CYVWRLLRGK-QTMTEF---EPLHKLQAHNGHILKC 217
[Close]
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT5G16750.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.400e-6
Identity = 41/176 (23.30%), Postives = 72/176 (40.91%), Query Frame = 1 

		  

Query: 47  VRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTET 106
           V AH K   +         + TGS D +     +     +  L+        RI ++  +
Sbjct: 495 VAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK----RRIFSVEFS 554

Query: 107 TI------ASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLS 166
           T+      ASGD    VK+W     SC  TF+ H   +   +F++D  + ++   DG L 
Sbjct: 555 TVDQCVMTASGDKT--VKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLK 614

Query: 167 VCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRF 217
           + ++ +++  A  +  ED+  +LAV K    +  G     + L+      D  D F
Sbjct: 615 LWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDF 664
[Close]
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.400e-6
Identity = 33/144 (22.92%), Postives = 60/144 (41.67%), Query Frame = 1 

		  

Query: 108 IASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSN 167
           +ASG   G +K+W  R   C   F  H++ ++ ++F  D  +LL+TS D T  +  ++S 
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSG 337

Query: 168 KVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRF--------VDL 227
           K+  +               +G ++I  +   T+ ++      DC   F         D 
Sbjct: 338 KLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD-SKTTDCLQTFKPPPPLRGTDA 397

Query: 228 SPNPVDALLKYDEDRLVAGSSNGI 244
           S N +    K  E  +V   ++ I
Sbjct: 398 SVNSIHLFPKNTEHIVVCNKTSSI 420
The following BLAST results are available for this feature:
BLAST of Spo11578.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902210534|gb|KNA16466.1|2.2e-201100.hypothetical protein SOVF_0889... [more]
gi|731370590|ref|XP_010665768.1|1.3e-17285.5PREDICTED: WD repeat-containin... [more]
gi|731324733|ref|XP_010673124.1|4.9e-17285.0PREDICTED: WD repeat-containin... [more]
gi|747068320|ref|XP_011080913.1|1.0e-14573.3PREDICTED: WD repeat-containin... [more]
gi|747068318|ref|XP_011080911.1|1.0e-14573.3PREDICTED: WD repeat-containin... [more]
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BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RAD7_SPIOL1.6e-201100.Uncharacterized protein OS=Spi... [more]
A0A0J8B9D7_BETVU8.9e-17385.5Uncharacterized protein OS=Bet... [more]
A0A0J8CP24_BETVU3.4e-17285.0Uncharacterized protein OS=Bet... [more]
F6HXL9_VITVI5.1e-13671.9Putative uncharacterized prote... [more]
M0ZV95_SOLTU2.5e-13567.5Uncharacterized protein OS=Sol... [more]
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BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WDR55_ARATH6.0e-13066.0WD repeat-containing protein 5... [more]
WDR55_DICDI8.3e-5535.2WD repeat-containing protein 5... [more]
WDR55_BOVIN3.0e-5239.2WD repeat-containing protein 5... [more]
WDR55_RAT5.6e-5138.1WD repeat-containing protein 5... [more]
WDR55_MOUSE7.3e-5138.1WD repeat-containing protein 5... [more]
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BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G34260.13.4e-13166.0transducin family protein / WD... [more]
AT2G43770.11.5e-1424.5Transducin/WD40 repeat-like su... [more]
AT3G18140.16.9e-727.5Transducin/WD40 repeat-like su... [more]
AT5G16750.13.4e-623.3Transducin family protein / WD... [more]
AT1G73720.14.4e-622.9transducin family protein / WD... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 260..291
score: 0
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 124..163
score: 0.0022coord: 40..79
score: 0.9coord: 82..121
score: 0.33coord: 1..34
score: 280.0coord: 166..205
score: 45.0coord: 251..291
score: 0.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 259..293
score: 8
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 11..294
score: 4.3
IPR017422WD repeat protein 55PIRPIRSF038169WD_rpt_55coord: 1..358
score: 3.0E
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 47..300
score: 17
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 6..294
score: 4.5
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 278..292
scor
NoneNo IPR availablePANTHERPTHR22840FAMILY NOT NAMEDcoord: 2..329
score: 2.7E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0044248 cellular catabolic process
biological_process GO:0009987 cellular process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006554 lysine catabolic process
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0048312 intracellular distribution of mitochondria
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042545 cell wall modification
biological_process GO:0048825 cotyledon development
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0009744 response to sucrose
biological_process GO:0009611 response to wounding
biological_process GO:0016246 RNA interference
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0048440 carpel development
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0052541 plant-type cell wall cellulose metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0008152 metabolic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0031365 N-terminal protein amino acid modification
biological_process GO:0070084 protein initiator methionine removal
biological_process GO:0016485 protein processing
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0006508 proteolysis
biological_process GO:0009960 endosperm development
biological_process GO:0010048 vernalization response
biological_process GO:0006950 response to stress
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0009507 chloroplast
cellular_component GO:0030117 membrane coat
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005618 cell wall
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0045252 oxoglutarate dehydrogenase complex
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005886 plasma membrane
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0000932 P-body
molecular_function GO:0003677 DNA binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0030976 thiamine pyrophosphate binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0070006 metalloaminopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016817 hydrolase activity, acting on acid anhydrides
RNA-Seq Expression