Spo11609 (gene) | SpinachBase

Overview


Name	Spo11609
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	26S proteasome non-atpase regulatory subunit, putative
Location	chr6 : 39830936 .. 39837512 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTAAAGAAAGGAAGAAAGTGAAGAAAGAACGAACTCAGAGACGAGAGGAGAGAGAAATTGCAGAAAACAGGAAGAATGGATCCGAAGCTAACAGAGATTGCTCAGACATTCGAACGTTTCAAAGCTGCTTCGGTTCGCAATGATTTCGATACCTGCACTCGTCTCCTTACTCAGCTCAAGGTAATTTTCTTCTTCTCTTTAAACCCTAGATCCTTCTTTCTTCTTCCATTGTTATGTAATTTTATTCAATTACCTTGCTTTTATCAATCGACAAGATTTTGTTGAATTTTATTTGAAGTTGTTCTTTATTTGCTCCATTTTATCGGGATTTTTAGGGTTTCCTATTGTTGTTGTGCGGCAAAAATGGTAGATTCGAGCTAATTCTGCTGTAAATGCTTACCTATTGGTTTAATTCGGTTGAAAACTTCAAATTCGAGCTCGAATTAACTCGATTGGTGATGAAAGGAATTAGCATTTTGTTTAATCTACGGTGTCAGTTGAAATAGTTGTCAAATGTTGATTGCGGATGAGGGTGTTATAGCGTGAAAGAGATTTAAACAACTGTACTGAGTAGATTATGACTTTTTTTCTTCAATTTTGGGGATGGAAGGCTCAAGAATGTCAAGCAAAGCAAGGAAAAGAGGTTTGGAGTTTTGGATTTTATCTTTTCGTTTTTGCTTGGGGAAAAGAATGACAGTTTTGAGATTTAAGAGAACCCTAATTCTTAGTCTAGATTAAATTTTATTTCCTACGACGACTCTCTTACATGAGAGTTTTTATGGGAAGGAAGAACACAAGTGAGTTATGGGGAAATCTCTGGTGTTAATATAGCGTCAATACATTACTTGGTTGTTTTCTGCTGCATTTTATTTTCTGAAATTGAAGTAATTCCTTAATCGGCGTGGCATGTTCTTTAATAGCTGAAGGGAGAGGGTTAGTAAGTTAAATATAGCTTAAAATTATTATGTATGGATTGCCGGTCACGGTGAACAATTGTGGTTAGTCCTTTCTACCAAATAAAATTAGCTGCTTGATTGACATGCTTGACTAAGTCTCTGTATTAACCTTCTGTCAAATTTGCTTGTATGATGCAGGTGTCGTTGATAGAATACCGAAGCCTTCCGCCAATGTTTGAAGCAACACCAAATGCTGTTCATGAATTGACCTTAGCAAGTAACTCCTTGTGTTCATCTTTTCCCTTTGATATTGTGACATATACAGCTACAGAGTATTTCATTTAATCTTTCTTTATTTTTTATAGTCTTTTACTGATGGTCATTTTCATTTTTCCTTTATTGTTTGATAATATTCAGGGGATATCTATGAGCATGCTGTTGTTCTAAGCGTCAAGATGGAGGATCAGGAAGCTTTTGAGAGGGACTTCTGCCAACTGAAACCTTATTACACTGATGCCAGGTAAATTATTATCCCTCTGCAAGGCAAAATTCTTCAAGTGTTAGTGTTAGGTACATTCTAGATGCGTAGGTAACCAAAAATCCCAGTGTTTTTGAATTTGATTTACAGGGGAACCTCCAATGTGCTTTAGCAAGTAGGACTAACCTTTCTATTTGGTCATCCGGTACTGATAGATAGCAATTCTAAAAGTCAATTAGCATGGTTTTGTATAACCTACTCATGAGAATGTGGCTTTAATCCTCTGATTCTGAATTAGTGTTTGATCCATGAGGCTCCAAAGAATTCAAAATGACAAGTTAAATTATGTTATTTTGAATCCTCAGCTATGTTGCCTCTTCCCTTCTCACCCCTCAGCTAACTCTATCTCTAATTATCTAAATTGTACCAAGTTCTTCTAAGCAATAGATATTTAGTAGAATTCTAAGTAGTACCACTTCTCTTTTGGACGGTCTATATAATATGACAATGTGACCTATGAAAATCGTTTCTGTGGATCTGAGAACAAACCTCCGCAATGTAAGCTGAAATTTAAAAAATTGGTCTTCTTTTGTGAGCGTTATTCTGCTCATTCACGAAAATCTTGAAACAAACATAGTGTTCTTGCTCTTCCCCACCCCTTTCCCTCTTTCTTTCCAACCCCTCTATTACTGTGGGGCGAGTCATGGTCAAACCTGACAGAAAGGCAGAGTTAAGGGAAGTGGAGGATATAGGGGATATTTTCTTATCTTAGTAGCATAACAGAAATATTATAGGCCGTTATTCTGTGGAAGCAAGTACTGAGGGCAGGCCTGAAAACTATATTTTGGATGACAGTTAAGTCAGCTGGCTTTTCCACATTTTATACAGCCTTAGTCTAACCCACCTTATTTGTCCTACTCAACAATATGGCACAGTCTGGCCGCACTTGATGTTAGTTTTTTTCTAGAATCCAAAAGAAAATATTAAAGGCTAGGTTCCAAATCACTATATCTGAATCAGCCCTGGCCAACTTGCTTGGCACCTTAGTTTAAAAAGGCGCAAGGCGCACTAAGGCGCTCAAGGGTCATGGAGCCTAGGCGCAAGATGCAAGGCTCAGGCGCGCGCCATTTAGATACGAGGCGCACATAATTTCCTAGTGAACCTTAAAATTCTGTATAGAACAAAATTAACACAATTTGTACTCAAAACAACATAATACTATTGGAGTGCCATATTTTCTTGCCGGTTTATAAGCATCGCATGATCCCGTCAATGGAGTGCAAGAATTAGAACCTTTCATGGTAATTACAAGCTGGAAATATGAAAATTAACTCATATTATGCTACTGCCACTACCCAAAAAGCTTAGCTTGTAGAGATATAACCGTTGATAGGTCACATGGGTTGTGTTTATATCATTAGGAGAGGAAAAAAAAAGTAAATAAAAGGATCCATGTCACCCTATTCCGCCTGAAGACCGAAGGCGCACAAGCGCAGTGAGCCTGGAGAGCTGAAGGCGCCAAAGGGTGAGCCTTGAGCCTAGGCACACTTTTTAAAACTAAGCTTGGCACATGCTGTGAAGTTTGTAGACTTTTGATCTCAGCAAGGTCTAACATGGAGTTTGTCACCATACTTAGTGAGTTAGTGGTATTATAACAGTCTCCTTTGGAAAAAAAATCTGTCCTGAAATCTCTTATCCTATAAGAATAACTCTTTGGATGACTTTTGTGTACAAGGACAAACTGGACATTAACCCACCTTCTCAAGCTAGTCTGAAAACAAGGAATTGAATCCTGTTAAAACTGTGTTGGAATCTTGGGATCACAAGGAGAGGCGATCATCCTCCCAGCATGTTCATCTGGTTTATGGCCAGTGTATGAAAAAGCGCAGCAGGGCACATAAATGTTTTTTACCCCAAATCTTTTACTTTGCCTCACTTAACGTGATGCAACGAGGTGCAGAAGGATCTGCATCGCCTCAACGTGCTAGGAGCTTTGTAATATTCCATCTGTTTGTTTAAGTGTTACAGTTACGTTCTTTAACACACAAGTTTGACTAATAGTATCTTTAGTTTTATACAAGTAATAAGTCAAAATAATAAGTCAACATTAGCATATGAATAGTGCAAAAGACCAAAATGTAACACTTGAAAACTCGGAGGGAGTACATTGGTTCTGATATGAGCACATTGTAGAACAACATAGAGTTTTTGAAATGATATCTTTGATACATGGTGCTCCGTCATTTCTATGTTCTAGGATTAGTTGCTAGGTAAAAATAGAGTCTGAAGGCCACTGGTTTTTACACATTTGTATTGGTGTTTTCATGTAAGATCTAATGTTCTTGATGTTTTAGAAACAAGCAGTACTGACTTTTTGTTTTTGTTGGAACAGGGGTCGTATACCACAATCTACACAAGAGTACCCAATCTTGGGACTGAACCTGTTGAGGCTTCTTGTCCAAAATAGAATTGCAGAGTTTCACACTGAATTGGAGTTGCTTTCATCTACTGCCTTGGAGAATCCTTGCATTAAGCATGCCGTGGAGCTGGAACAGTCCTTTATGGAAGGAGCCTACAACCGTGTTTTGAGTGCTAGACAGACTGTGCCGCATGAAACTTACGTGCACTTCATGGATTTGTTGGCCAAAACTGTGAGGTATATCCTCTTGTGTACCTCTCTATTTTGATTGCAACTTCGCCTCTGTTTGATTTTTGTATGGAGTGGTATAATGGATTTGATATGGTTTTTGGTATTAATGCGTTCCCTGTAAATTGCAGAGATGAGATTGCTGGGTGCAGTGAAAAAGCATATGATACACTTTCAGTAAATGATGCGCGACAACTGTTGCTGTTCTCATCTGACAAGGATTTGCTCGAGTATATCAAGGAGGTAATCATAACAGATTTGTGGTTGAAGGTTTTTCCTTGTGATTTTATTTTCTCCCTTTGAATAAGCTCTGTAGATGGAGTAATTACCAGATAAATTGAGTAGAGTGTCGATTCATGTTATCTGCTGCAACATCAGAAATCAAATGTCTGGAACTAACATCTCATTAAGAACAACTGTTATACAGTGTAAGCTGTGATCCTAAAAAGCTTGGTTGTGATACTGTCTGCTGTTAGCCTACTACAATGAATTGAAAACTTCAACCACTTAAATACTTCTCACTTTAGGAATATTTCTGACTTATTCAAGCATGATTGACCTATTTGCTAAAGTTAAGTTGTTATTATAAATTCTAATCAGTTGAATGTTCATCCAACATTGTTGATGTCCTTATTTACACCTTCACCGGTGACATGATTCAGCTGTTTGAGGAACATCCCGAGTAGGAGATCAAAGATGGATGTATTAAGAAATGATTATTAGAGTTTAACTATAGGATCAAATAGTAGTTAATGGCAAAAGCCAAAAGCTACTTGACAAAAACAATATTGTGTGTTCAATCCATCGCATCTACCACTCCATTGCAGCCTACTCTAGTCCATAACACAAATTGTATACACATTGCATGCACACATCAGACAATGCGCATAAAATTTACTCCGAATGCAAGTATTTAGTAAATACTACGGCTCTGTTCTATTCACCTTATATCCACTTAAGTTCAGATAAGATAAGTAAAATAAGGGTTGACTAAGTACAATTTATAACTATAATAAGTTTTGATAATTTCTAATAAGTTCAGATAAGTTCAGGAAATAAGTGAAAATCAGGTGAATAGAACGCACCCTGCCTTGTATTTACTTAGGGTGTCCTTAAATCCTTATCAGAACTTATTTGAAATTATCGTCCTTAGGGTTAACAACCCTTAAACTTAACTGAACTTATCTAACTTTTCCAATGTAAGCTGTGATCCATAAAAAGCCTGGTTGTGATACTGCCTGCTGTTAGCCTACTGCAATGAGTTGAAAACTTGAACTATTTTAATACTTCTCACTTTAGAAATATTTCTGATTTACTCAAGCATGATTCACCTATTTGCTAAAGTTAAGTTGTTATTATGAATTCTAACCAGTTGAATGCTCTTCCAACACTGTCGATGTCCTTATTAACACCTTCATCGGCTACATGATTCAGCTGTTTTATTGAATACGTTCCTATTCATATTATTTAACGTTGCTTCCAGGAACATCCCGAGTGGGAAATCAAAGATGGATGTGTTGTTTTCCAGAAGTCAAAAGATTCTGCAACATGCAAGGAGATTCCTTCTCTGTTACTCATCAACCAAACTCTCAGTTACGCCAGGGAACTTGAGAGGATTGTGTAGTGAAGTAGCAGTTCCAAACAATTCCATTTCCATTGCAGCATTTGATGCAAGATGGCCAATGCATCACCTACTCATGATTCACCTATTTGCTAAAGACGGAGAAATTGAGCTTGTGAAGGTGCATACCGCACATGATTGCAGGAACGATTAGAATTTTGATTTTAGTGTTACATTTGAAGATCGTATGTCCTGCAATTACAGTTCAAATTTGGCTTATAACCTTTATTTTCTACTTATTAAGACCTCTTTGCTCTTTCAAAGTGTTCTAGTATGATTATCTTTCTATTTTGATGTTGCCTATTATCGCTAAGACTTTATTGGAAGATATGTACCCCGTTATAATTTGTTTCAATATTTGTTAAATTGTTATTTTTGTTCAGCCGAGCTTGTCATGGAGTGTTAAAATGCCTGGGATAGTTTTGTTTCAGAAGAACTAAGGGGCGTTTGGTATGGGGTATTCAGGAAAGGGAAAGGGAATCAAAAAGACTAATTCTCTTTGTTGTTGTTTGTATTGCCATTTTAATCATTCCCTTTACCCCTTTCATTCCCCCAAATCCCTCTATATAGATTCTCCACCCCCTCTATATTGATTCCCTCCCCCAAGGTATTGACATTCCCTGTCCTTGAGCTACCACACCACCCATCTATCACTGCCAACCCAACACGTTGTCACCCTCACCGAACGGCTCCACCACCATCTCCCTCAAACACCACTGTGAAACCATATCTGTTGCCGGAAGATCCATCTTAACCGCCGACTAAAACCCTCACCGGCACGGCTACACCACCATCTCCCTCAAACAGCAACGCAAAACCCTAGCTGTCACTGGAAGACTCATCTTAACCGCCTAAAACCCTAATCGGCCGAAAATCCTAGCCGCCACCAGAAGAGACCTCATCCTAACCATCAAAAGATCCCACACTAGCCG

mRNA sequence

TTGGTAAAGAAAGGAAGAAAGTGAAGAAAGAACGAACTCAGAGACGAGAGGAGAGAGAAATTGCAGAAAACAGGAAGAATGGATCCGAAGCTAACAGAGATTGCTCAGACATTCGAACGTTTCAAAGCTGCTTCGGTTCGCAATGATTTCGATACCTGCACTCGTCTCCTTACTCAGCTCAAGGTGTCGTTGATAGAATACCGAAGCCTTCCGCCAATGTTTGAAGCAACACCAAATGCTGTTCATGAATTGACCTTAGCAAGGGATATCTATGAGCATGCTGTTGTTCTAAGCGTCAAGATGGAGGATCAGGAAGCTTTTGAGAGGGACTTCTGCCAACTGAAACCTTATTACACTGATGCCAGGGGTCGTATACCACAATCTACACAAGAGTACCCAATCTTGGGACTGAACCTGTTGAGGCTTCTTGTCCAAAATAGAATTGCAGAGTTTCACACTGAATTGGAGTTGCTTTCATCTACTGCCTTGGAGAATCCTTGCATTAAGCATGCCGTGGAGCTGGAACAGTCCTTTATGGAAGGAGCCTACAACCGTGTTTTGAGTGCTAGACAGACTGTGCCGCATGAAACTTACGTGCACTTCATGGATTTGTTGGCCAAAACTGTGAGAGATGAGATTGCTGGGTGCAGTGAAAAAGCATATGATACACTTTCAGTAAATGATGCGCGACAACTGTTGCTGTTCTCATCTGACAAGGATTTGCTCGAGTATATCAAGGAGGAACATCCCGAGTGGGAAATCAAAGATGGATGTGTTGTTTTCCAGAAGTCAAAAGATTCTGCAACATGCAAGGAGATTCCTTCTCTGTTACTCATCAACCAAACTCTCAGTTACGCCAGGGAACTTGAGAGGATTGTGTAGTGAAGTAGCAGTTCCAAACAATTCCATTTCCATTGCAGCATTTGATGCAAGATGGCCAATGCATCACCTACTCATGATTCACCTATTTGCTAAAGACGGAGAAATTGAGCTTGTGAAGGTGCATACCGCACATGATTGCAGGAACGATTAGAATTTTGATTTTAGTGTTACATTTGAAGATCGTATGTCCTGCAATTACAGTTCAAATTTGGCTTATAACCTTTATTTTCTACTTATTAAGACCTCTTTGCTCTTTCAAAGTGTTCTAGTATGATTATCTTTCTATTTTGATGTTGCCTATTATCGCTAAGACTTTATTGGAAGATATGTACCCCGTTATAATTTGTTTCAATATTTGTTAAATTGTTATTTTTGTTCAGCCGAGCTTGTCATGGAGTGTTAAAATGCCTGGGATAGTTTTGTTTCAGAAGAACTAAGGGGCGTTTGGTATGGGGTATTCAGGAAAGGGAAAGGGAATCAAAAAGACTAATTCTCTTTGTTGTTGTTTGTATTGCCATTTTAATCATTCCCTTTACCCCTTTCATTCCCCCAAATCCCTCTATATAGATTCTCCACCCCCTCTATATTGATTCCCTCCCCCAAGGTATTGACATTCCCTGTCCTTGAGCTACCACACCACCCATCTATCACTGCCAACCCAACACGTTGTCACCCTCACCGAACGGCTCCACCACCATCTCCCTCAAACACCACTGTGAAACCATATCTGTTGCCGGAAGATCCATCTTAACCGCCGACTAAAACCCTCACCGGCACGGCTACACCACCATCTCCCTCAAACAGCAACGCAAAACCCTAGCTGTCACTGGAAGACTCATCTTAACCGCCTAAAACCCTAATCGGCCGAAAATCCTAGCCGCCACCAGAAGAGACCTCATCCTAACCATCAAAAGATCCCACACTAGCCG

Coding sequence (CDS)

ATGGATCCGAAGCTAACAGAGATTGCTCAGACATTCGAACGTTTCAAAGCTGCTTCGGTTCGCAATGATTTCGATACCTGCACTCGTCTCCTTACTCAGCTCAAGGTGTCGTTGATAGAATACCGAAGCCTTCCGCCAATGTTTGAAGCAACACCAAATGCTGTTCATGAATTGACCTTAGCAAGGGATATCTATGAGCATGCTGTTGTTCTAAGCGTCAAGATGGAGGATCAGGAAGCTTTTGAGAGGGACTTCTGCCAACTGAAACCTTATTACACTGATGCCAGGGGTCGTATACCACAATCTACACAAGAGTACCCAATCTTGGGACTGAACCTGTTGAGGCTTCTTGTCCAAAATAGAATTGCAGAGTTTCACACTGAATTGGAGTTGCTTTCATCTACTGCCTTGGAGAATCCTTGCATTAAGCATGCCGTGGAGCTGGAACAGTCCTTTATGGAAGGAGCCTACAACCGTGTTTTGAGTGCTAGACAGACTGTGCCGCATGAAACTTACGTGCACTTCATGGATTTGTTGGCCAAAACTGTGAGAGATGAGATTGCTGGGTGCAGTGAAAAAGCATATGATACACTTTCAGTAAATGATGCGCGACAACTGTTGCTGTTCTCATCTGACAAGGATTTGCTCGAGTATATCAAGGAGGAACATCCCGAGTGGGAAATCAAAGATGGATGTGTTGTTTTCCAGAAGTCAAAAGATTCTGCAACATGCAAGGAGATTCCTTCTCTGTTACTCATCAACCAAACTCTCAGTTACGCCAGGGAACTTGAGAGGATTGTGTAG

Protein sequence

MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTLARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLAKTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKDSATCKEIPSLLLINQTLSYARELERIV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11609.1	Spo11609.1	mRNA

Homology

[Close]

BLAST of Spo11609.1 vs. NCBI nr
Match: gi|902230857|gb|KNA22020.1| (hypothetical protein SOVF_037910 [Spinacia oleracea])

HSP 1 Score: 530.8 bits (1366), Expect = 1.400e-147
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL
Sbjct: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA
Sbjct: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD
Sbjct: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SATCKEIPSLLLINQTLSYARELERIV
Sbjct: 241 SATCKEIPSLLLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. NCBI nr
Match: gi|731367398|ref|XP_010695589.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 487.6 bits (1254), Expect = 1.300e-134
Identity = 241/267 (90.26%), Postives = 256/267 (95.88%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MD K+TE++QTFERFKAAS+RNDFDTCTRLL+QLKV+L E+RSLPP+ EATPNAVHELTL
Sbjct: 1   MDAKITELSQTFERFKAASLRNDFDTCTRLLSQLKVALTEFRSLPPLLEATPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           AR+IYEHAVVLSVKMEDQ+AFERDFCQLKPYYTDAR R P S QEYPILGLNLLRLLVQN
Sbjct: 61  AREIYEHAVVLSVKMEDQDAFERDFCQLKPYYTDARDRFPPSQQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS ALENPCIKHA+ELEQSFMEGAYNRVLSARQ+VPHETYVHFMDLLA
Sbjct: 121 RIAEFHTELELLSSAALENPCIKHAIELEQSFMEGAYNRVLSARQSVPHETYVHFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD+LS+NDARQLLLFSSD DLLEYIKEEH +WEIKDGCVVFQKSKD
Sbjct: 181 KTVRDEIAGCSEKAYDSLSLNDARQLLLFSSDNDLLEYIKEEHSDWEIKDGCVVFQKSKD 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA CKEIPSLLLINQTLSYARELERIV
Sbjct: 241 SAPCKEIPSLLLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. NCBI nr
Match: gi|747041674|ref|XP_011074567.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Sesamum indicum])

HSP 1 Score: 459.1 bits (1180), Expect = 5.100e-126
Identity = 226/267 (84.64%), Postives = 248/267 (92.88%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPK+TE++Q FERFKAA VR DFDTCT LL+QLKV L  ++SLPP+FE TPNA+HELTL
Sbjct: 1   MDPKITEVSQVFERFKAAFVRKDFDTCTSLLSQLKVLLTGFKSLPPLFEETPNAIHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK EDQ+AFERDF QLKPYYTD+RGR+P S QEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYTDSRGRLPPSPQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLS +AL+NPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSPSALDNPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD+LS+NDARQ+LLFSSDK+LLEYI EEHPEWEIK+G V FQ++K+
Sbjct: 181 KTVRDEIAGCSEKAYDSLSLNDARQMLLFSSDKELLEYINEEHPEWEIKNGSVFFQRAKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           S  CKEIPSL LINQTLSYARELERIV
Sbjct: 241 SVPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. NCBI nr
Match: gi|1009156030|ref|XP_015896028.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Ziziphus jujuba])

HSP 1 Score: 459.1 bits (1180), Expect = 5.100e-126
Identity = 228/267 (85.39%), Postives = 248/267 (92.88%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTE++Q FERFKAA +R DF+TC   L+QLKV L  +RSLPP+FE TPNAVHELTL
Sbjct: 1   MDPKLTEVSQLFERFKAAFIRKDFNTCENFLSQLKVLLTGFRSLPPLFEDTPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK+EDQ+AFERDF QLKPYYTDAR R+PQS QEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKVEDQDAFERDFFQLKPYYTDARNRLPQSPQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD LS+++ARQ+LLF+SDK+LL YI+EEHPEWEIKDG V FQK+K+
Sbjct: 181 KTVRDEIAGCSEKAYDYLSISNARQMLLFTSDKELLNYIEEEHPEWEIKDGSVYFQKAKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA CKEIPSL LINQTLSYARELERIV
Sbjct: 241 SAPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. NCBI nr
Match: gi|1009173814|ref|XP_015868016.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 8 homolog A [Ziziphus jujuba])

HSP 1 Score: 456.4 bits (1173), Expect = 3.300e-125
Identity = 228/267 (85.39%), Postives = 246/267 (92.13%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTE++Q FERFKAA VR DF+TC   L+QLKV L  +RSLPP+FE TPNAVHELTL
Sbjct: 1   MDPKLTEVSQLFERFKAAFVRKDFNTCENFLSQLKVLLTGFRSLPPLFEDTPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK+EDQ+AFERDF QLKPYYTDAR R+PQS QEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKVEDQDAFERDFFQLKPYYTDARNRLPQSPQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS ALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD LS+++ARQ+LLF+SDK+LL YI+EEHPEWEIKDG V FQK K+
Sbjct: 181 KTVRDEIAGCSEKAYDYLSISNARQMLLFTSDKELLNYIEEEHPEWEIKDGSVYFQKVKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA CKEIPSL LINQTLSYARELERIV
Sbjct: 241 SAPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR58_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_037910 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 9.600e-148
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL
Sbjct: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA
Sbjct: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD
Sbjct: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SATCKEIPSLLLINQTLSYARELERIV
Sbjct: 241 SATCKEIPSLLLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9E3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125850 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 9.400e-135
Identity = 241/267 (90.26%), Postives = 256/267 (95.88%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MD K+TE++QTFERFKAAS+RNDFDTCTRLL+QLKV+L E+RSLPP+ EATPNAVHELTL
Sbjct: 1   MDAKITELSQTFERFKAASLRNDFDTCTRLLSQLKVALTEFRSLPPLLEATPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           AR+IYEHAVVLSVKMEDQ+AFERDFCQLKPYYTDAR R P S QEYPILGLNLLRLLVQN
Sbjct: 61  AREIYEHAVVLSVKMEDQDAFERDFCQLKPYYTDARDRFPPSQQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS ALENPCIKHA+ELEQSFMEGAYNRVLSARQ+VPHETYVHFMDLLA
Sbjct: 121 RIAEFHTELELLSSAALENPCIKHAIELEQSFMEGAYNRVLSARQSVPHETYVHFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD+LS+NDARQLLLFSSD DLLEYIKEEH +WEIKDGCVVFQKSKD
Sbjct: 181 KTVRDEIAGCSEKAYDSLSLNDARQLLLFSSDNDLLEYIKEEHSDWEIKDGCVVFQKSKD 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA CKEIPSLLLINQTLSYARELERIV
Sbjct: 241 SAPCKEIPSLLLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Match: A0A059C2K3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00889 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.100e-125
Identity = 230/267 (86.14%), Postives = 243/267 (91.01%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTE++Q F RFKAA VRNDF TCT LL+QLKV L E+ SLPP+FE TPNAVHELTL
Sbjct: 1   MDPKLTEVSQQFGRFKAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTL 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAV+LSVKMEDQEAFERDF QLKPYYTDA G IP S QEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS ALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD LS+ DARQ+LLFSSD++L EYIKEEHPEWEIK G V FQK+K+
Sbjct: 181 KTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEIKSGSVYFQKAKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA  KEIPSL LINQTLSYARELERIV
Sbjct: 241 SAPSKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Match: W9RWK4_9ROSA (26S proteasome non-ATPase regulatory subunit RPN12A OS=Morus notabilis GN=L484_007834 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.700e-125
Identity = 225/267 (84.27%), Postives = 249/267 (93.26%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPKLTE++Q FERFKAA +R DF+TCT LL+QLKV L  +RSLPP+FE TPNAVHELT+
Sbjct: 93  MDPKLTEVSQLFERFKAAILRKDFNTCTNLLSQLKVLLTAFRSLPPLFEETPNAVHELTI 152

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK+EDQ+AFERDF QLKPYYTDAR RIP S +EYPILGLNLLRLLVQN
Sbjct: 153 ARDIYEHAVVLSVKVEDQDAFERDFFQLKPYYTDARDRIPPSPEEYPILGLNLLRLLVQN 212

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS ALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 213 RIAEFHTELELLSSIALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 272

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KTVRDEIAGCSEKAYD LS+NDARQ+LLF+SD++LL+YI+EEH EW++KDG VVFQK+K+
Sbjct: 273 KTVRDEIAGCSEKAYDYLSINDARQMLLFTSDQELLKYIEEEHIEWDVKDGLVVFQKAKE 332

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           S+ CKEIPSL LINQTLSYARELERIV
Sbjct: 333 SSPCKEIPSLQLINQTLSYARELERIV 359

[Close]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Match: B7FL82_MEDTR (26S proteasome regulatory particle non-ATPase subunit 12 OS=Medicago truncatula GN=MTR_1g016750 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.000e-124
Identity = 224/267 (83.90%), Postives = 247/267 (92.51%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDPK TE++Q F+RFKAA +RNDFD+ + LL+QLKV L  +RSLPP+F  TPNAV ELT+
Sbjct: 1   MDPKFTEVSQLFDRFKAAFLRNDFDSASNLLSQLKVLLTGFRSLPPLFADTPNAVQELTI 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK+EDQ+AFERDF QLKPYYTDAR R+PQS QEYPILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKIEDQDAFERDFFQLKPYYTDARNRLPQSPQEYPILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KT+RDEIAGCSEKAYD LS+NDA+Q+LLF+ D++LLEYIKEEHPEWEIK+G V FQK+KD
Sbjct: 181 KTIRDEIAGCSEKAYDYLSINDAKQMLLFTKDQELLEYIKEEHPEWEIKNGSVYFQKAKD 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           SA CKEIPSL LINQTLSYARELERIV
Sbjct: 241 SAPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Match: PSD8A_ARATH (26S proteasome non-ATPase regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPN12A PE=1 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 4.300e-117
Identity = 209/267 (78.28%), Postives = 238/267 (89.14%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDP+LTE++Q FERFKAA  R D++TC+ LL+QLKV L ++ SLPP+FE +PNA  ELT+
Sbjct: 1   MDPQLTEVSQQFERFKAAFARKDYNTCSDLLSQLKVLLTKFTSLPPLFENSPNAAKELTI 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK EDQ+AFERDF QLKPYY DAR RIPQS QE  ILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYVDARNRIPQSPQENLILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS  LE+PCIKHAVELEQSFMEGAYNRVLSARQT P  TYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSATLEDPCIKHAVELEQSFMEGAYNRVLSARQTAPDATYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KT+RDEIAGCSEKAYD +S++DARQ+LLFSSD++LL Y+ +EHPEWE+K+G VVFQK+K+
Sbjct: 181 KTIRDEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQKAKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           +A CKEIPSL LINQTLSYARELERIV
Sbjct: 241 TAPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Match: PSD8B_ARATH (Putative 26S proteasome non-ATPase regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPN12B PE=5 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 1.500e-77
Identity = 164/269 (60.97%), Postives = 192/269 (71.38%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCT--RLLTQLKVSLIEYRSLPPMFEATPNAVHEL 60
           MDP+L E++Q FERFKAA +  DFD  T   LL+QLK  L ++     +   + NA+  L
Sbjct: 1   MDPQLMEVSQQFERFKAAFIIKDFD--TCSSLLSQLK--LFDHY----LISLSLNALLLL 60

Query: 61  TLARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLV 120
           T A                             ++   R RIP S QE  I+GLNLLRLLV
Sbjct: 61  TCAL----------------------------FFLCTRNRIPPSPQENLIMGLNLLRLLV 120

Query: 121 QNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDL 180
           QNRIAEFHTEL LLSS  LENPCIKHAVELEQSFMEGAYNRVLSARQT P ETYV+FMDL
Sbjct: 121 QNRIAEFHTELGLLSSATLENPCIKHAVELEQSFMEGAYNRVLSARQTAPDETYVYFMDL 180

Query: 181 LAKTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKS 240
           LAKT+RDEIAGCSEKAYD LS+++  ++LLFSSD+ LL Y+ EEHPEWE+KDG VVFQK+
Sbjct: 181 LAKTIRDEIAGCSEKAYDHLSISEGCKMLLFSSDQQLLTYVNEEHPEWEVKDGLVVFQKT 233

Query: 241 KDSATCKEIPSLLLINQTLSYARELERIV 268
           +++A CKEIPSL LINQTLSY RELERI+
Sbjct: 241 RETAPCKEIPSLQLINQTLSYTRELERIL 233

[Close]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Match: PSMD8_DICDI (Probable 26S proteasome non-ATPase regulatory subunit 8 OS=Dictyostelium discoideum GN=psmD8-1 PE=2 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 5.600e-48
Identity = 108/264 (40.91%), Postives = 165/264 (62.50%), Query Frame = 1


		  
Query: 6   TEIAQTFERFKAASVRN-DFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVH-ELTLARD 65
           + I Q    FK     N D    T +L QLK++   +   P       + V  +L LAR+
Sbjct: 4   SSIEQNLNNFKKLVAGNSDKAQITPVLVQLKLAATIHLEKPTSLSNVSDKVKKDLVLARE 63

Query: 66  IYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQNRIA 125
           I E   + S+K++D ++FER F QLK YY D +  I  ST EY I+GLNL+RLL +++ +
Sbjct: 64  ILELISLYSIKIKDIDSFERTFNQLKTYYYDYKSIIAPSTLEYQIIGLNLMRLLAKHKTS 123

Query: 126 EFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLAKTV 185
           EFH+E+EL+    L+N  IK  + +E+S  EG+YN+++ +R  VP E Y  F+D+LA ++
Sbjct: 124 EFHSEIELIEFNNLDNSFIKFPLLVEKSITEGSYNKIIQSRSGVPSEYYQVFLDILADSI 183

Query: 186 RDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKDSAT 245
           +++IA CSEK++ TLS+ DA ++LLF+ +    +YIKE +  W+++   + F  + +   
Sbjct: 184 KEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYIKERN--WKVQGDVIQFGNNDNQTV 243

Query: 246 CKEIPSLLLINQTLSYARELERIV 268
             EIPSL LI+QTL YA+ELERIV
Sbjct: 244 --EIPSLQLIHQTLHYAKELERIV 263

[Close]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Match: PSMD8_MOUSE (26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus GN=Psmd8 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 6.000e-42
Identity = 103/243 (42.39%), Postives = 142/243 (58.44%), Query Frame = 1


		  
Query: 27  CTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTLARDIYEHAVVLSVKMEDQEAFERDFC 86
           C   L +LK+ L+E   LP     T     +L LARDI E     S+  +D  +FER   
Sbjct: 115 CGEELGRLKLVLLELNFLPTT--GTKLTKQQLILARDILEIGAQWSILCKDIPSFERYMA 174

Query: 87  QLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQNRIAEFHTELELLSSTALE-NPCIKHA 146
           QLK YY D + ++P+S   + +LGLNLL LL QNR+AEFHTELE L +  ++ N  IKH 
Sbjct: 175 QLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHP 234

Query: 147 VELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLAKTVRDEIAGCSEKAYDTLSVNDARQ 206
           V LEQ  MEG+YN+V  A+  +P E+Y  F+D+L  T+RDEIAGC EKAY+ +   +A +
Sbjct: 235 VSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFAEATR 294

Query: 207 LLLFSSDKDLLEYIKEEHPEWEI-KDGCVVFQKSKDSATCKEIPSLLLINQTLSYARELE 266
           +L FS+ K + +Y K+    W +  +    F   +       IPS  L  Q + YAR+LE
Sbjct: 295 ILFFSTPKKMTDYAKKR--GWVLGPNNYYSFASQQQKPEDSTIPSTELAKQVIEYARQLE 353

Query: 267 RIV 268
            IV
Sbjct: 355 MIV 353

[Close]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Match: PSMD8_BOVIN (26S proteasome non-ATPase regulatory subunit 8 OS=Bos taurus GN=PSMD8 PE=2 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 7.800e-42
Identity = 107/267 (40.07%), Postives = 150/267 (56.18%), Query Frame = 1


		  
Query: 5   LTEIAQTFERFKAASVRN--DFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTLAR 64
           L   A  +E+ K    R   +   C   L +LK+ L+E   LP     T     +L LAR
Sbjct: 25  LQAAAGMYEQLKGEWNRKSPNLSKCGEELGRLKLVLLELNFLPTT--GTKLTKQQLILAR 84

Query: 65  DIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQNRI 124
           DI E     S+  +D  +FER   QLK YY D + ++P+S   + +LGLNLL LL QNR+
Sbjct: 85  DIQEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRV 144

Query: 125 AEFHTELELLSSTALE-NPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLAK 184
           AEFHTELE L +  ++ N  IKH V LEQ  MEG+YN+V  A+  +P E+Y  F+D+L  
Sbjct: 145 AEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLD 204

Query: 185 TVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIK-DGCVVFQKSKD 244
           T+RDEIAGC EKAY+ +   +A ++L F++ K + +Y K+    W +  +    F   + 
Sbjct: 205 TIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKR--GWVLGINNYYSFASQQQ 264

Query: 245 SATCKEIPSLLLINQTLSYARELERIV 268
                 IPS  L  Q + YAR+LE IV
Sbjct: 265 KPEDTTIPSTELAKQVIEYARQLEMIV 287

[Close]

BLAST of Spo11609.1 vs. TAIR (Arabidopsis)
Match: AT1G64520.1 (regulatory particle non-ATPase 12A)

HSP 1 Score: 422.2 bits (1084), Expect = 2.400e-118
Identity = 209/267 (78.28%), Postives = 238/267 (89.14%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCTRLLTQLKVSLIEYRSLPPMFEATPNAVHELTL 60
           MDP+LTE++Q FERFKAA  R D++TC+ LL+QLKV L ++ SLPP+FE +PNA  ELT+
Sbjct: 1   MDPQLTEVSQQFERFKAAFARKDYNTCSDLLSQLKVLLTKFTSLPPLFENSPNAAKELTI 60

Query: 61  ARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLVQN 120
           ARDIYEHAVVLSVK EDQ+AFERDF QLKPYY DAR RIPQS QE  ILGLNLLRLLVQN
Sbjct: 61  ARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYVDARNRIPQSPQENLILGLNLLRLLVQN 120

Query: 121 RIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDLLA 180
           RIAEFHTELELLSS  LE+PCIKHAVELEQSFMEGAYNRVLSARQT P  TYV+FMDLLA
Sbjct: 121 RIAEFHTELELLSSATLEDPCIKHAVELEQSFMEGAYNRVLSARQTAPDATYVYFMDLLA 180

Query: 181 KTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKSKD 240
           KT+RDEIAGCSEKAYD +S++DARQ+LLFSSD++LL Y+ +EHPEWE+K+G VVFQK+K+
Sbjct: 181 KTIRDEIAGCSEKAYDYVSISDARQMLLFSSDQELLTYVTDEHPEWEVKEGFVVFQKAKE 240

Query: 241 SATCKEIPSLLLINQTLSYARELERIV 268
           +A CKEIPSL LINQTLSYARELERIV
Sbjct: 241 TAPCKEIPSLQLINQTLSYARELERIV 267

[Close]

BLAST of Spo11609.1 vs. TAIR (Arabidopsis)
Match: AT5G42040.1 (regulatory particle non-ATPase 12B)

HSP 1 Score: 290.8 bits (743), Expect = 8.500e-79
Identity = 164/269 (60.97%), Postives = 192/269 (71.38%), Query Frame = 1


		  
Query: 1   MDPKLTEIAQTFERFKAASVRNDFDTCT--RLLTQLKVSLIEYRSLPPMFEATPNAVHEL 60
           MDP+L E++Q FERFKAA +  DFD  T   LL+QLK  L ++     +   + NA+  L
Sbjct: 1   MDPQLMEVSQQFERFKAAFIIKDFD--TCSSLLSQLK--LFDHY----LISLSLNALLLL 60

Query: 61  TLARDIYEHAVVLSVKMEDQEAFERDFCQLKPYYTDARGRIPQSTQEYPILGLNLLRLLV 120
           T A                             ++   R RIP S QE  I+GLNLLRLLV
Sbjct: 61  TCAL----------------------------FFLCTRNRIPPSPQENLIMGLNLLRLLV 120

Query: 121 QNRIAEFHTELELLSSTALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVHFMDL 180
           QNRIAEFHTEL LLSS  LENPCIKHAVELEQSFMEGAYNRVLSARQT P ETYV+FMDL
Sbjct: 121 QNRIAEFHTELGLLSSATLENPCIKHAVELEQSFMEGAYNRVLSARQTAPDETYVYFMDL 180

Query: 181 LAKTVRDEIAGCSEKAYDTLSVNDARQLLLFSSDKDLLEYIKEEHPEWEIKDGCVVFQKS 240
           LAKT+RDEIAGCSEKAYD LS+++  ++LLFSSD+ LL Y+ EEHPEWE+KDG VVFQK+
Sbjct: 181 LAKTIRDEIAGCSEKAYDHLSISEGCKMLLFSSDQQLLTYVNEEHPEWEVKDGLVVFQKT 233

Query: 241 KDSATCKEIPSLLLINQTLSYARELERIV 268
           +++A CKEIPSL LINQTLSY RELERI+
Sbjct: 241 RETAPCKEIPSLQLINQTLSYTRELERIL 233

The following BLAST results are available for this feature:

BLAST of Spo11609.1 vs. NCBI nr
BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
BLAST of Spo11609.1 vs. TAIR (Arabidopsis)

BLAST of Spo11609.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230857\|gb\|KNA22020.1\|	1.4e-147	100.	hypothetical protein SOVF_0379...	[more]
gi\|731367398\|ref\|XP_010695589.1\|	1.3e-134	90.2	PREDICTED: 26S proteasome non-...	[more]
gi\|747041674\|ref\|XP_011074567.1\|	5.1e-126	84.6	PREDICTED: 26S proteasome non-...	[more]
gi\|1009156030\|ref\|XP_015896028.1\|	5.1e-126	85.3	PREDICTED: 26S proteasome non-...	[more]
gi\|1009173814\|ref\|XP_015868016.1\|	3.3e-125	85.3	PREDICTED: 26S proteasome non-...	[more]

BLAST of Spo11609.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RR58_SPIOL	9.6e-148	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9E3_BETVU	9.4e-135	90.2	Uncharacterized protein OS=Bet...	[more]
A0A059C2K3_EUCGR	5.1e-125	86.1	Uncharacterized protein OS=Euc...	[more]
W9RWK4_9ROSA	6.7e-125	84.2	26S proteasome non-ATPase regu...	[more]
B7FL82_MEDTR	2.0e-124	83.9	26S proteasome regulatory part...	[more]

BLAST of Spo11609.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PSD8A_ARATH	4.3e-117	78.2	26S proteasome non-ATPase regu...	[more]
PSD8B_ARATH	1.5e-77	60.9	Putative 26S proteasome non-AT...	[more]
PSMD8_DICDI	5.6e-48	40.9	Probable 26S proteasome non-AT...	[more]
PSMD8_MOUSE	6.0e-42	42.3	26S proteasome non-ATPase regu...	[more]
PSMD8_BOVIN	7.8e-42	40.0	26S proteasome non-ATPase regu...	[more]

BLAST of Spo11609.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G64520.1	2.4e-118	78.2	regulatory particle non-ATPase...	[more]
AT5G42040.1	8.5e-79	60.9	regulatory particle non-ATPase...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006746	26S proteasome non-ATPase regulatory subunit Rpn12	PANTHER	PTHR12387	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8	coord: 1..267 score: 7.6E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0007030	Golgi organization
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0051258	protein polymerization
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009409	response to cold
biological_process	GO:0009932	cell tip growth
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006228	UTP biosynthetic process
biological_process	GO:0006833	water transport
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006412	translation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0016132	brassinosteroid biosynthetic process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005838	proteasome regulatory particle
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0044424	intracellular part
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08082	0.73	Barchart \| Table
Spo02534	0.71	Barchart \| Table
Spo12311	0.71	Barchart \| Table
Spo17653	0.70	Barchart \| Table
Spo23220	0.69	Barchart \| Table
Spo15132	0.69	Barchart \| Table
Spo09714	0.69	Barchart \| Table
Spo02942	0.69	Barchart \| Table
Spo03675	0.68	Barchart \| Table
Spo15751	0.68	Barchart \| Table
Spo02011	0.68	Barchart \| Table
Spo02838	0.67	Barchart \| Table
Spo23241	0.67	Barchart \| Table
Spo06318	0.67	Barchart \| Table
Spo09833	0.67	Barchart \| Table
Spo11026	0.67	Barchart \| Table
Spo12048	0.66	Barchart \| Table
Spo08488	0.66	Barchart \| Table
Spo11943	0.66	Barchart \| Table
Spo12045	0.66	Barchart \| Table
Spo13288	0.66	Barchart \| Table
Spo13561	0.66	Barchart \| Table
Spo15583	0.66	Barchart \| Table
Spo20161	0.66	Barchart \| Table
Spo20376	0.66	Barchart \| Table
Spo22394	0.66	Barchart \| Table
Spo24914	0.65	Barchart \| Table