Spo11668 (gene)

Overview
NameSpo11668
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_05959 : 2486 .. 3114 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCACCATTATTCTACCCACATACATCATCACGCACCCTTTGCTTCATTTTCTCTCTCCTCAAAAACGGAGGCGTAGCAGTTACCCTCACCAACTTATATCTCCCTCACATTTCTTCTTCTTCTTTCAAAAACCCCATCATCTTTTTTTTTCATTTTTCCTTCCTAAAACTTTGACTTTCACAATTTCCAACCAAATTTTTTTACCCATCACCATTTTTTTCCCTTTCATTTTGAATAATAAAAACCAAACACAACACAACATTTTACCAACAAATTTCTTCTTGTTTTCTCTTTTTTCCCTCTTTTTTTTTCCTCCATTTTCATCACACAGATAGAATTTACATAAATTTTGATTGAAGTTTCTTCATTTTACCCTTCTTTTGAGTTTTCCGGCAGCCAAACAGGGCACAAAAGAAGACCTCCTAAATACGGTAAGCATCTCCAAAATGCAAATATGATAATAATACAAAATCTTCTATTTTTGGTTTAATTAACTGTTTCATTGGTTTCAGTCTAAATGTGTAATTAATTCATAAAAATAATTCAATTATTCCAATTTCTTACTAATATTCCTCTGTTTTTTTACTCTATTATTAATTTTTTTTTTTCAGGAATTAAAATTTGA

mRNA sequence

ATGCGCACCATTATTCTACCCACATACATCATCACGCACCCTTTGCTTCATTTTCTCTCTCCTCAAAAACGGAGGCGTAGCAGTTACCCTCACCAACTTATATCTCCCTCACATTTCTTCTTCTTCTTTCAAAAACCCCATCATCTTTTTTTTTCATTTTTCCTTCCTAAAACTTTGACTTTCACAATTTCCAACCAAATTTTTTTACCCATCACCATTTTTTTCCCTTTCATTTTGAATAATAAAAACCAAACACAACACAACATTTTACCAACAAATTTCTTCTTCCAAACAGGGCACAAAAGAAGACCTCCTAAATACGGAATTAAAATTTGA

Coding sequence (CDS)

ATGCGCACCATTATTCTACCCACATACATCATCACGCACCCTTTGCTTCATTTTCTCTCTCCTCAAAAACGGAGGCGTAGCAGTTACCCTCACCAACTTATATCTCCCTCACATTTCTTCTTCTTCTTTCAAAAACCCCATCATCTTTTTTTTTCATTTTTCCTTCCTAAAACTTTGACTTTCACAATTTCCAACCAAATTTTTTTACCCATCACCATTTTTTTCCCTTTCATTTTGAATAATAAAAACCAAACACAACACAACATTTTACCAACAAATTTCTTCTTCCAAACAGGGCACAAAAGAAGACCTCCTAAATACGGAATTAAAATTTGA

Protein sequence

MRTIILPTYIITHPLLHFLSPQKRRRSSYPHQLISPSHFFFFFQKPHHLFFSFFLPKTLTFTISNQIFLPITIFFPFILNNKNQTQHNILPTNFFFQTGHKRRPPKYGIKI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11668.1Spo11668.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo11668.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11668.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11668.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11668.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0010206 photosystem II repair
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045900 negative regulation of translational elongation
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0009987 cellular process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0042318 penicillin biosynthetic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006650 glycerophospholipid metabolic process
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:0046168 glycerol-3-phosphate catabolic process
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0017001 antibiotic catabolic process
biological_process GO:0048653 anther development
biological_process GO:0006464 cellular protein modification process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0009555 pollen development
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009737 response to abscisic acid
biological_process GO:0043407 negative regulation of MAP kinase activity
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0009658 chloroplast organization
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0048767 root hair elongation
biological_process GO:0006457 protein folding
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005730 nucleolus
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0009331 glycerol-3-phosphate dehydrogenase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005829 cytosol
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009543 chloroplast thylakoid lumen
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005515 protein binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0008800 beta-lactamase activity
molecular_function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity
molecular_function GO:0004416 hydroxyacylglutathione hydrolase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003935 GTP cyclohydrolase II activity
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0005179 hormone activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0005047 signal recognition particle binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo209120.75Barchart | Table
Spo233820.75Barchart | Table
Spo115240.74Barchart | Table
Spo116880.73Barchart | Table
Spo097690.72Barchart | Table
Spo233320.72Barchart | Table
Spo169960.72Barchart | Table
Spo149420.72Barchart | Table
Spo108350.72Barchart | Table
Spo044330.71Barchart | Table
Spo094990.71Barchart | Table
Spo218330.71Barchart | Table
Spo115090.71Barchart | Table
Spo169600.71Barchart | Table
Spo250080.71Barchart | Table
Spo093870.71Barchart | Table
Spo201060.70Barchart | Table
Spo104440.70Barchart | Table
Spo132810.70Barchart | Table
Spo232860.70Barchart | Table
Spo182230.70Barchart | Table
Spo084350.69Barchart | Table
Spo002830.69Barchart | Table
Spo025130.69Barchart | Table
Spo095540.69Barchart | Table
Spo114170.69Barchart | Table
Spo137830.69Barchart | Table
Spo152220.69Barchart | Table
Spo161860.69Barchart | Table
Spo175780.69Barchart | Table
Spo181300.69Barchart | Table
Spo191230.69Barchart | Table
Spo237120.69Barchart | Table
Spo247360.69Barchart | Table
Spo255730.69Barchart | Table
Spo263550.69Barchart | Table
Spo270810.69Barchart | Table
Spo273640.69Barchart | Table
Spo081140.68Barchart | Table
Spo139050.68Barchart | Table
Spo177260.68Barchart | Table
Spo012520.68Barchart | Table
Spo002050.68Barchart | Table
Spo189430.68Barchart | Table
Spo146670.68Barchart | Table
Spo192170.68Barchart | Table
Spo060040.68Barchart | Table
Spo005260.68Barchart | Table
Spo007480.68Barchart | Table
Spo062780.68Barchart | Table
Spo103160.68Barchart | Table
Spo021060.68Barchart | Table
Spo053070.68Barchart | Table
Spo087130.67Barchart | Table
Spo123640.67Barchart | Table
Spo139810.67Barchart | Table
Spo069530.67Barchart | Table
Spo084070.67Barchart | Table
Spo026960.67Barchart | Table
Spo144030.67Barchart | Table
Spo272390.67Barchart | Table
Spo228110.67Barchart | Table
Spo182850.67Barchart | Table
Spo155850.67Barchart | Table
Spo016280.67Barchart | Table
Spo153170.67Barchart | Table
Spo216000.67Barchart | Table
Spo201870.66Barchart | Table
Spo104910.66Barchart | Table
Spo114310.66Barchart | Table
Spo052690.66Barchart | Table
Spo052270.66Barchart | Table
Spo131610.66Barchart | Table
Spo134990.66Barchart | Table
Spo142730.66Barchart | Table
Spo019250.66Barchart | Table
Spo153900.66Barchart | Table
Spo154610.66Barchart | Table
Spo256530.66Barchart | Table
Spo168040.66Barchart | Table
Spo172090.66Barchart | Table
Spo002560.66Barchart | Table
Spo176100.66Barchart | Table
Spo177880.66Barchart | Table
Spo180630.66Barchart | Table
Spo185780.66Barchart | Table
Spo251960.66Barchart | Table
Spo008720.66Barchart | Table
Spo201740.66Barchart | Table
Spo209300.66Barchart | Table
Spo216600.66Barchart | Table
Spo006770.66Barchart | Table
Spo229980.66Barchart | Table
Spo066550.66Barchart | Table
Spo237570.66Barchart | Table
Spo096050.66Barchart | Table
Spo061640.66Barchart | Table
Spo251870.65Barchart | Table
Spo243310.65Barchart | Table
Spo176120.65Barchart | Table
Spo015110.65Barchart | Table
Spo245900.65Barchart | Table
Spo146300.65Barchart | Table
Spo244300.65Barchart | Table
Spo089970.65Barchart | Table
Spo063350.65Barchart | Table
Spo129540.65Barchart | Table
Spo216350.65Barchart | Table
Spo096710.65Barchart | Table
Spo006670.65Barchart | Table
Spo207700.65Barchart | Table
Spo004980.65Barchart | Table