Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTTCGAGTCCATCAGGTCAACAACAAAGAGATCACCAAAAGCAAGAAGGGGCGGATACCTGCTGTAAAAAGAGGAAGCGTATGCAGTCGAACAGAGAATCAGCTAGAAGGTCCCGCCTTCGAAAACAAAACCACCTGGACGACCTGGCGGTCCAGGTGGCCGAGCTCAAGGCTCAGAACAGCAGAATAATATCCACCACCAACACGAGTACGCAGCTTTATTTGGAGGTCGAGGCGGAGAATTCTGTCCTGAGGGCTCAGCTGTCTGAGCTCAGTAACCGTCTTCAGTCCCTTAATGACATCATCAACTGCCTCAGTAACAACAACGTTCATGGAAACATCAACAACAACAACAACAACAACAACAACAACGTCATGAGGATTACAACTAGCACTACAAGTGATGGTTGTAGTAGTGATGATCAAGAGATTAGCTTGATTGGTAGCTTTGATGTTGATCTTGAGTTTGATGATGATTTTTCGATGAATTCGTGGGGGTTTTCGTTCGCGAATTATCCTACTACGACCCCAGATGCGTTCATGTGTTGA ATGGCAAGTTCGAGTCCATCAGGTCAACAACAAAGAGATCACCAAAAGCAAGAAGGGGCGGATACCTGCTGTAAAAAGAGGAAGCGTATGCAGTCGAACAGAGAATCAGCTAGAAGGTCCCGCCTTCGAAAACAAAACCACCTGGACGACCTGGCGGTCCAGGTGGCCGAGCTCAAGGCTCAGAACAGCAGAATAATATCCACCACCAACACGAGTACGCAGCTTTATTTGGAGGTCGAGGCGGAGAATTCTGTCCTGAGGGCTCAGCTGTCTGAGCTCAGTAACCGTCTTCAGTCCCTTAATGACATCATCAACTGCCTCAGTAACAACAACGTTCATGGAAACATCAACAACAACAACAACAACAACAACAACAACGTCATGAGGATTACAACTAGCACTACAAGTGATGGTTGTAGTAGTGATGATCAAGAGATTAGCTTGATTGGTAGCTTTGATGTTGATCTTGAGTTTGATGATGATTTTTCGATGAATTCGTGGGGGTTTTCGTTCGCGAATTATCCTACTACGACCCCAGATGCGTTCATGTGTTGA ATGGCAAGTTCGAGTCCATCAGGTCAACAACAAAGAGATCACCAAAAGCAAGAAGGGGCGGATACCTGCTGTAAAAAGAGGAAGCGTATGCAGTCGAACAGAGAATCAGCTAGAAGGTCCCGCCTTCGAAAACAAAACCACCTGGACGACCTGGCGGTCCAGGTGGCCGAGCTCAAGGCTCAGAACAGCAGAATAATATCCACCACCAACACGAGTACGCAGCTTTATTTGGAGGTCGAGGCGGAGAATTCTGTCCTGAGGGCTCAGCTGTCTGAGCTCAGTAACCGTCTTCAGTCCCTTAATGACATCATCAACTGCCTCAGTAACAACAACGTTCATGGAAACATCAACAACAACAACAACAACAACAACAACAACGTCATGAGGATTACAACTAGCACTACAAGTGATGGTTGTAGTAGTGATGATCAAGAGATTAGCTTGATTGGTAGCTTTGATGTTGATCTTGAGTTTGATGATGATTTTTCGATGAATTCGTGGGGGTTTTCGTTCGCGAATTATCCTACTACGACCCCAGATGCGTTCATGTGTTGA MASSSPSGQQQRDHQKQEGADTCCKKRKRMQSNRESARRSRLRKQNHLDDLAVQVAELKAQNSRIISTTNTSTQLYLEVEAENSVLRAQLSELSNRLQSLNDIINCLSNNNVHGNINNNNNNNNNNVMRITTSTTSDGCSSDDQEISLIGSFDVDLEFDDDFSMNSWGFSFANYPTTTPDAFMC Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11721.1 vs. NCBI nr
Match: gi|902153206|gb|KNA05678.1| (hypothetical protein SOVF_188050 [Spinacia oleracea]) HSP 1 Score: 280.4 bits (716), Expect = 2.200e-72 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 1
BLAST of Spo11721.1 vs. NCBI nr
Match: gi|731337431|ref|XP_010679785.1| (PREDICTED: ocs element-binding factor 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 164.9 bits (416), Expect = 1.400e-37 Identity = 112/193 (58.03%), Postives = 134/193 (69.43%), Query Frame = 1
BLAST of Spo11721.1 vs. NCBI nr
Match: gi|502130857|ref|XP_004500793.1| (PREDICTED: ocs element-binding factor 1-like [Cicer arietinum]) HSP 1 Score: 109.4 bits (272), Expect = 6.800e-21 Identity = 68/103 (66.02%), Postives = 87/103 (84.47%), Query Frame = 1
BLAST of Spo11721.1 vs. NCBI nr
Match: gi|1012357088|gb|KYP68273.1| (Ocs element-binding factor 1 [Cajanus cajan]) HSP 1 Score: 107.5 bits (267), Expect = 2.600e-20 Identity = 65/101 (64.36%), Postives = 81/101 (80.20%), Query Frame = 1
BLAST of Spo11721.1 vs. NCBI nr
Match: gi|565350024|ref|XP_006341974.1| (PREDICTED: bZIP transcription factor 53-like [Solanum tuberosum]) HSP 1 Score: 107.1 bits (266), Expect = 3.400e-20 Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG84_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188050 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.600e-72 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBA8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g129360 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 9.600e-38 Identity = 112/193 (58.03%), Postives = 134/193 (69.43%), Query Frame = 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Match: A0A151TMK0_CAJCA (Ocs element-binding factor 1 OS=Cajanus cajan GN=KK1_021894 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.800e-20 Identity = 65/101 (64.36%), Postives = 81/101 (80.20%), Query Frame = 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Match: A0A0V0H526_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.400e-20 Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Match: M0ZWC7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003701 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.400e-20 Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Match: BZP11_ARATH (bZIP transcription factor 11 OS=Arabidopsis thaliana GN=BZIP11 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-18 Identity = 68/122 (55.74%), Postives = 84/122 (68.85%), Query Frame = 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.200e-18 Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Match: BZP44_ARATH (bZIP transcription factor 44 OS=Arabidopsis thaliana GN=BZIP44 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.100e-15 Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 3.400e-12 Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana GN=BZIP53 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.400e-12 Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Match: AT4G34590.1 (G-box binding factor 6) HSP 1 Score: 94.7 bits (234), Expect = 6.200e-20 Identity = 68/122 (55.74%), Postives = 84/122 (68.85%), Query Frame = 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Match: AT2G18160.1 (basic leucine-zipper 2) HSP 1 Score: 93.2 bits (230), Expect = 1.800e-19 Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Match: AT1G75390.1 (basic leucine-zipper 44) HSP 1 Score: 84.7 bits (208), Expect = 6.400e-17 Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Match: AT3G62420.1 (basic region/leucine zipper motif 53) HSP 1 Score: 72.8 bits (177), Expect = 2.500e-13 Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Match: AT5G15830.1 (basic leucine-zipper 3) HSP 1 Score: 51.6 bits (122), Expect = 6.000e-7 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11721.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11721.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11721.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo11721.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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