Spo11788 (gene) | SpinachBase

Overview


Name	Spo11788
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111754500 .. 111754913 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGTACAAAGAAGCTCATCAAAATGGCAAGAAAATGGAAGAAGCTCGCAGCAGCCAGCAGAAGAAGGATTTCATGGCCAGCACCAACAGTGGCCAACAAGGGTCATTTTGTTATCTATACAACAGATGGAAGACGATTTATGATTCCTCTGGTATATCTTCAGAGTGAGATTCTTACAGAGCTTTTGAAGATGGCAGAAGAAGAGTTTGGACTGATAAGTGAAGGGCCTATCACACTACCATGTGATTCGACTTTTATGGAATACGCCATGTCTATTCTCCAAAGACATGCAAATGAGGATTTGGTGAAAGCAGTTATCATGTCCTTAGACAGTTGTAGCTCCTCATTATCATCATCAAAATTACAGCAAGAGTACAACAATCAGCAACTTTTAATATCTAGCTTCTAG

mRNA sequence

ATGATTAGTACAAAGAAGCTCATCAAAATGGCAAGAAAATGGAAGAAGCTCGCAGCAGCCAGCAGAAGAAGGATTTCATGGCCAGCACCAACAGTGGCCAACAAGGGTCATTTTGTTATCTATACAACAGATGGAAGACGATTTATGATTCCTCTGGTATATCTTCAGAGTGAGATTCTTACAGAGCTTTTGAAGATGGCAGAAGAAGAGTTTGGACTGATAAGTGAAGGGCCTATCACACTACCATGTGATTCGACTTTTATGGAATACGCCATGTCTATTCTCCAAAGACATGCAAATGAGGATTTGGTGAAAGCAGTTATCATGTCCTTAGACAGTTGTAGCTCCTCATTATCATCATCAAAATTACAGCAAGAGTACAACAATCAGCAACTTTTAATATCTAGCTTCTAG

Coding sequence (CDS)

ATGATTAGTACAAAGAAGCTCATCAAAATGGCAAGAAAATGGAAGAAGCTCGCAGCAGCCAGCAGAAGAAGGATTTCATGGCCAGCACCAACAGTGGCCAACAAGGGTCATTTTGTTATCTATACAACAGATGGAAGACGATTTATGATTCCTCTGGTATATCTTCAGAGTGAGATTCTTACAGAGCTTTTGAAGATGGCAGAAGAAGAGTTTGGACTGATAAGTGAAGGGCCTATCACACTACCATGTGATTCGACTTTTATGGAATACGCCATGTCTATTCTCCAAAGACATGCAAATGAGGATTTGGTGAAAGCAGTTATCATGTCCTTAGACAGTTGTAGCTCCTCATTATCATCATCAAAATTACAGCAAGAGTACAACAATCAGCAACTTTTAATATCTAGCTTCTAG

Protein sequence

MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSSSKLQQEYNNQQLLISSF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11788.1	Spo11788.1	mRNA

Homology

[Close]

BLAST of Spo11788.1 vs. NCBI nr
Match: gi|870849035|gb|KMT01298.1| (hypothetical protein BVRB_9g213140 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 226.9 bits (577), Expect = 2.200e-56
Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKWKKLAAASRRRISWP P VANKGHFVIYTTDGRRFMIPLVYL+SEI+
Sbjct: 1   MISTKKLLKMARKWKKLAAASRRRISWPTPIVANKGHFVIYTTDGRRFMIPLVYLKSEII 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL +MAEEEFGLISEGPITLPCDST MEYA+SILQRHAN DL KA+I+SLDSC  S+SS
Sbjct: 61  RELFRMAEEEFGLISEGPITLPCDSTSMEYAISILQRHANGDLEKALIVSLDSCRYSVSS 120

Query: 121 SKLQQEYNN--QQLLISSF 138
           SKLQQ+YNN  QQ LISSF
Sbjct: 121 SKLQQDYNNKDQQYLISSF 139

[Close]

BLAST of Spo11788.1 vs. NCBI nr
Match: gi|870849034|gb|KMT01297.1| (hypothetical protein BVRB_9g213130 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 188.0 bits (476), Expect = 1.100e-44
Identity = 96/137 (70.07%), Postives = 117/137 (85.40%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MIS+KKLIK+ARKW++LAAASR+R+SWP   V +KGHFVIYTTDG RFMIPL YL+SEI+
Sbjct: 1   MISSKKLIKIARKWQRLAAASRKRVSWPGSKVVDKGHFVIYTTDGIRFMIPLTYLKSEIV 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
           T+L +MAEEEFGL+S+GP+T+PCDSTF+EYA+SILQRHA +D  KA+I+SL +C S  SS
Sbjct: 61  TQLFRMAEEEFGLMSDGPLTVPCDSTFIEYAISILQRHAAKDFEKALILSLSTCHS--SS 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S LQQE  NQ L I SF
Sbjct: 121 SCLQQEQINQHLPIHSF 135

[Close]

BLAST of Spo11788.1 vs. NCBI nr
Match: gi|902203452|gb|KNA14562.1| (hypothetical protein SOVF_106460 [Spinacia oleracea])

HSP 1 Score: 183.7 bits (465), Expect = 2.100e-43
Identity = 97/137 (70.80%), Postives = 113/137 (82.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKW+K+AAASR+RISWP P VA+KGHFV+YTTDGRRF+IPL YL+SEI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKSEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL ++AEEEFGL S GPITLPCDS+FMEYA+S++QR   EDL KA+IMSL SC  S S 
Sbjct: 61  IELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYS-SV 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S   Q+  N  LLISSF
Sbjct: 121 SHEHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11788.1 vs. NCBI nr
Match: gi|902210322|gb|KNA16394.1| (hypothetical protein SOVF_089570 [Spinacia oleracea])

HSP 1 Score: 180.6 bits (457), Expect = 1.800e-42
Identity = 95/137 (69.34%), Postives = 113/137 (82.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKW+K+AAASR+RISWP P VA+KGHFV+YTTDGRRF+IPL YL++EI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKNEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL ++AEEEFGL S GPITLPCDS+FMEY +SI+QR   EDL KA+IMSL SC  S S 
Sbjct: 61  IELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYS-SV 120

Query: 121 SKLQQEYNNQQLLISSF 138
           +   Q+  N Q+LISSF
Sbjct: 121 THEYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11788.1 vs. NCBI nr
Match: gi|731357566|ref|XP_010690279.1| (PREDICTED: uncharacterized protein LOC104903852 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 175.6 bits (444), Expect = 5.800e-41
Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKLIKMARKW+K+AAASR+RISWP  ++AN+GHFV+YTTDGRRFMIPL YL++EI 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPR-SLANEGHFVVYTTDGRRFMIPLKYLKTEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL K+A+EE+G+ S GPITLPCDS FMEY +S++QRH  EDL KA+IMSL +C  S S 
Sbjct: 61  IELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLAACKYS-SL 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S   QE  N  LLI SF
Sbjct: 121 SLENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMP2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213140 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.500e-56
Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKWKKLAAASRRRISWP P VANKGHFVIYTTDGRRFMIPLVYL+SEI+
Sbjct: 1   MISTKKLLKMARKWKKLAAASRRRISWPTPIVANKGHFVIYTTDGRRFMIPLVYLKSEII 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL +MAEEEFGLISEGPITLPCDST MEYA+SILQRHAN DL KA+I+SLDSC  S+SS
Sbjct: 61  RELFRMAEEEFGLISEGPITLPCDSTSMEYAISILQRHANGDLEKALIVSLDSCRYSVSS 120

Query: 121 SKLQQEYNN--QQLLISSF 138
           SKLQQ+YNN  QQ LISSF
Sbjct: 121 SKLQQDYNNKDQQYLISSF 139

[Close]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJV3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213130 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.900e-45
Identity = 96/137 (70.07%), Postives = 117/137 (85.40%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MIS+KKLIK+ARKW++LAAASR+R+SWP   V +KGHFVIYTTDG RFMIPL YL+SEI+
Sbjct: 1   MISSKKLIKIARKWQRLAAASRKRVSWPGSKVVDKGHFVIYTTDGIRFMIPLTYLKSEIV 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
           T+L +MAEEEFGL+S+GP+T+PCDSTF+EYA+SILQRHA +D  KA+I+SL +C S  SS
Sbjct: 61  TQLFRMAEEEFGLMSDGPLTVPCDSTFIEYAISILQRHAAKDFEKALILSLSTCHS--SS 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S LQQE  NQ L I SF
Sbjct: 121 SCLQQEQINQHLPIHSF 135

[Close]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R709_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106460 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.500e-43
Identity = 97/137 (70.80%), Postives = 113/137 (82.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKW+K+AAASR+RISWP P VA+KGHFV+YTTDGRRF+IPL YL+SEI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKSEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL ++AEEEFGL S GPITLPCDS+FMEYA+S++QR   EDL KA+IMSL SC  S S 
Sbjct: 61  IELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYS-SV 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S   Q+  N  LLISSF
Sbjct: 121 SHEHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089570 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.300e-42
Identity = 95/137 (69.34%), Postives = 113/137 (82.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKL+KMARKW+K+AAASR+RISWP P VA+KGHFV+YTTDGRRF+IPL YL++EI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKNEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL ++AEEEFGL S GPITLPCDS+FMEY +SI+QR   EDL KA+IMSL SC  S S 
Sbjct: 61  IELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYS-SV 120

Query: 121 SKLQQEYNNQQLLISSF 138
           +   Q+  N Q+LISSF
Sbjct: 121 THEYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213060 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.000e-41
Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTVANKGHFVIYTTDGRRFMIPLVYLQSEIL 60
           MISTKKLIKMARKW+K+AAASR+RISWP  ++AN+GHFV+YTTDGRRFMIPL YL++EI 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPR-SLANEGHFVVYTTDGRRFMIPLKYLKTEIF 60

Query: 61  TELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSSSLSS 120
            EL K+A+EE+G+ S GPITLPCDS FMEY +S++QRH  EDL KA+IMSL +C  S S 
Sbjct: 61  IELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLAACKYS-SL 120

Query: 121 SKLQQEYNNQQLLISSF 138
           S   QE  N  LLI SF
Sbjct: 121 SLENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.000e-29
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTV-------ANKGHFVIYTTDGRRFMIPLV 60
           MI+ KKL+KMA+KW++ AA  R+RIS+    V         KG FV+YT D  RF  P+ 
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + I+ ELLK++EEEFGL +EGPITLP DS F+EY + ++QR  + D  KA++MS+ S
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CSSSLSSSKLQQEYNNQQLLI 135
              SL  S LQQE + QQLL+
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.500e-28
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWP------APTVANKGHFVIYTTDGRRFMIPLVY 60
           M++TKKLIKMA+KW++ AA  R+RIS+       + T A KG FV+YTTD  RF  PL Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSC 120
           L + +  ELLK++EEEFGL + GPIT P DS F+EY + ++QR  + D  KA++MS+ S 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 SSSLSSSKLQQEYNNQQLLI 135
             S   S   QE + QQLL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Match: SAU66_ARATH (Auxin-responsive protein SAUR66 OS=Arabidopsis thaliana GN=SAUR66 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.200e-27
Identity = 65/138 (47.10%), Postives = 92/138 (66.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAP----TVANKGHFVIYTTDGRRFMIPLVYLQ 60
           M++TKKLIKM RKW++ AA  R+RIS+  P    T   KG FV+YT D  RF  P+ YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSS 120
           + +  E+L+++EEEFGL + GPITLP DS F+EY + +++R  + D  KA++MS+ S   
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SLSSSKLQQEYNNQQLLI 135
           SL     +QE + QQLL+
Sbjct: 121 SLQ----KQEQSTQQLLV 134

[Close]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Match: SAU61_ARATH (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.100e-26
Identity = 65/140 (46.43%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISW-------PAPTVANKGHFVIYTTDGRRFMIPLV 60
           M++TKKL+KMA+KW++ AA  R+RIS+        + T A KG FV+YT+D  RF  P+ 
Sbjct: 1   MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + ++ ELLK++EEEFG+ +EGPITLP DS F+EY + ++QR  + D  KA+I S+ S
Sbjct: 61  YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISS 120

Query: 121 CSSSLSSSKLQQEYNNQQLL 134
              SL  S   QE+++ +L+
Sbjct: 121 TRCSLPCSFQLQEHSSTRLV 140

[Close]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.400e-26
Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWP-------APTVANKGHFVIYTTDGRRFMIPLV 60
           MI+ KKL+K+A+KW++ AA  R+RIS+        + T   KG FV+YT D  RF  PL 
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + I+ ELLK++EEEFGL +EGPITLP DS F+EY ++++QR  +ED  KA+++S+ S
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 CSSSLSSSKLQQEYNNQQLLI 135
             SS      Q     QQLL+
Sbjct: 122 ARSSFQPQ--QHCSATQQLLV 140

[Close]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 131.0 bits (328), Expect = 5.800e-31
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAPTV-------ANKGHFVIYTTDGRRFMIPLV 60
           MI+ KKL+KMA+KW++ AA  R+RIS+    V         KG FV+YT D  RF  P+ 
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + I+ ELLK++EEEFGL +EGPITLP DS F+EY + ++QR  + D  KA++MS+ S
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CSSSLSSSKLQQEYNNQQLLI 135
              SL  S LQQE + QQLL+
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.3 bits (316), Expect = 1.400e-29
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWP------APTVANKGHFVIYTTDGRRFMIPLVY 60
           M++TKKLIKMA+KW++ AA  R+RIS+       + T A KG FV+YTTD  RF  PL Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSC 120
           L + +  ELLK++EEEFGL + GPIT P DS F+EY + ++QR  + D  KA++MS+ S 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 SSSLSSSKLQQEYNNQQLLI 135
             S   S   QE + QQLL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Match: AT1G29500.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 3.500e-28
Identity = 65/138 (47.10%), Postives = 92/138 (66.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWPAP----TVANKGHFVIYTTDGRRFMIPLVYLQ 60
           M++TKKLIKM RKW++ AA  R+RIS+  P    T   KG FV+YT D  RF  P+ YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDSCSS 120
           + +  E+L+++EEEFGL + GPITLP DS F+EY + +++R  + D  KA++MS+ S   
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SLSSSKLQQEYNNQQLLI 135
           SL     +QE + QQLL+
Sbjct: 121 SLQ----KQEQSTQQLLV 134

[Close]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Match: AT1G29420.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 6.000e-28
Identity = 65/140 (46.43%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISW-------PAPTVANKGHFVIYTTDGRRFMIPLV 60
           M++TKKL+KMA+KW++ AA  R+RIS+        + T A KG FV+YT+D  RF  P+ 
Sbjct: 1   MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + ++ ELLK++EEEFG+ +EGPITLP DS F+EY + ++QR  + D  KA+I S+ S
Sbjct: 61  YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISS 120

Query: 121 CSSSLSSSKLQQEYNNQQLL 134
              SL  S   QE+++ +L+
Sbjct: 121 TRCSLPCSFQLQEHSSTRLV 140

[Close]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Match: AT1G29430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 1.300e-27
Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWKKLAAASRRRISWP-------APTVANKGHFVIYTTDGRRFMIPLV 60
           MI+ KKL+K+A+KW++ AA  R+RIS+        + T   KG FV+YT D  RF  PL 
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLQSEILTELLKMAEEEFGLISEGPITLPCDSTFMEYAMSILQRHANEDLVKAVIMSLDS 120
           YL + I+ ELLK++EEEFGL +EGPITLP DS F+EY ++++QR  +ED  KA+++S+ S
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 CSSSLSSSKLQQEYNNQQLLI 135
             SS      Q     QQLL+
Sbjct: 122 ARSSFQPQ--QHCSATQQLLV 140

The following BLAST results are available for this feature:

BLAST of Spo11788.1 vs. NCBI nr
BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
BLAST of Spo11788.1 vs. TAIR (Arabidopsis)

BLAST of Spo11788.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870849035\|gb\|KMT01298.1\|	2.2e-56	84.8	hypothetical protein BVRB_9g21...	[more]
gi\|870849034\|gb\|KMT01297.1\|	1.1e-44	70.0	hypothetical protein BVRB_9g21...	[more]
gi\|902203452\|gb\|KNA14562.1\|	2.1e-43	70.8	hypothetical protein SOVF_1064...	[more]
gi\|902210322\|gb\|KNA16394.1\|	1.8e-42	69.3	hypothetical protein SOVF_0895...	[more]
gi\|731357566\|ref\|XP_010690279.1\|	5.8e-41	67.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo11788.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BMP2_BETVU	1.5e-56	84.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8BJV3_BETVU	7.9e-45	70.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9R709_SPIOL	1.5e-43	70.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9RBK5_SPIOL	1.3e-42	69.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMV1_BETVU	4.0e-41	67.8	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo11788.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU67_ARATH	1.0e-29	50.3	Auxin-responsive protein SAUR6...	[more]
SAU64_ARATH	2.5e-28	49.2	Auxin-responsive protein SAUR6...	[more]
SAU66_ARATH	6.2e-27	47.1	Auxin-responsive protein SAUR6...	[more]
SAU61_ARATH	1.1e-26	46.4	Auxin-responsive protein SAUR6...	[more]
SAU62_ARATH	2.4e-26	47.5	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11788.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29510.1	5.8e-31	50.3	SAUR-like auxin-responsive pro...	[more]
AT1G29450.1	1.4e-29	49.2	SAUR-like auxin-responsive pro...	[more]
AT1G29500.1	3.5e-28	47.1	SAUR-like auxin-responsive pro...	[more]
AT1G29420.1	6.0e-28	46.4	SAUR-like auxin-responsive pro...	[more]
AT1G29430.1	1.3e-27	47.5	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..95 score: 1.7
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..137 score: 1.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11789	0.75	Barchart \| Table
Spo11790	0.69	Barchart \| Table