Spo11790 (gene) | SpinachBase

Overview


Name	Spo11790
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111750204 .. 111750611 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAGTGGCAGAAGCTAGCAGCAGCTAGCAGAAGAAGGATATCATGGCCCAGATCAGTGGCTAATAAAGGCCACTTCATAGTTTACACTACAGATGCAAAAAGATTTATGATTCCCTTAACATACCTCAAGAATGAGATTGTTAGCGAGCTCCTCAGAATGGCCGAGGAAGAGTTTGGACTAGCAGGTGACAGGCCAATCACACTTCCTTGTCATTCAATTTTTATGGAGTACATAATCTCAGTGATCCAAAGACACATTGCTCGTGATTTGGAGAAAGCATTGATCACATCCTTGGCCCCCTGCAGATACTCATCATCATCATACGAACATCAAGAACAAAACAACCAGCAATTATGTATCCATAGCTTCTAG

mRNA sequence

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAGTGGCAGAAGCTAGCAGCAGCTAGCAGAAGAAGGATATCATGGCCCAGATCAGTGGCTAATAAAGGCCACTTCATAGTTTACACTACAGATGCAAAAAGATTTATGATTCCCTTAACATACCTCAAGAATGAGATTGTTAGCGAGCTCCTCAGAATGGCCGAGGAAGAGTTTGGACTAGCAGGTGACAGGCCAATCACACTTCCTTGTCATTCAATTTTTATGGAGTACATAATCTCAGTGATCCAAAGACACATTGCTCGTGATTTGGAGAAAGCATTGATCACATCCTTGGCCCCCTGCAGATACTCATCATCATCATACGAACATCAAGAACAAAACAACCAGCAATTATGTATCCATAGCTTCTAG

Coding sequence (CDS)

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAGTGGCAGAAGCTAGCAGCAGCTAGCAGAAGAAGGATATCATGGCCCAGATCAGTGGCTAATAAAGGCCACTTCATAGTTTACACTACAGATGCAAAAAGATTTATGATTCCCTTAACATACCTCAAGAATGAGATTGTTAGCGAGCTCCTCAGAATGGCCGAGGAAGAGTTTGGACTAGCAGGTGACAGGCCAATCACACTTCCTTGTCATTCAATTTTTATGGAGTACATAATCTCAGTGATCCAAAGACACATTGCTCGTGATTTGGAGAAAGCATTGATCACATCCTTGGCCCCCTGCAGATACTCATCATCATCATACGAACATCAAGAACAAAACAACCAGCAATTATGTATCCATAGCTTCTAG

Protein sequence

MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSYEHQEQNNQQLCIHSF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11790.1	Spo11790.1	mRNA

Homology

[Close]

BLAST of Spo11790.1 vs. NCBI nr
Match: gi|902203452|gb|KNA14562.1| (hypothetical protein SOVF_106460 [Spinacia oleracea])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKL+KMARKWQK+AAASR+RISWPR VA+KGHF+VYTTD +RF+IPL YLK+EI  
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFGL    PITLPC S FMEY IS+IQR +A DLEKALI SLA CRYSS S+
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQ+Q N  L I SF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11790.1 vs. NCBI nr
Match: gi|902210322|gb|KNA16394.1| (hypothetical protein SOVF_089570 [Spinacia oleracea])

HSP 1 Score: 197.2 bits (500), Expect = 1.800e-47
Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKL+KMARKWQK+AAASR+RISWPR VA+KGHF+VYTTD +RF+IPL YLKNEI  
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKNEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFGL    PITLPC S FMEY IS+IQR +A DL KALI SLA CRYSS ++
Sbjct: 61  ELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVTH 120

Query: 121 EHQEQNNQQLCIHSF 136
           E+Q+Q N Q+ I SF
Sbjct: 121 EYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11790.1 vs. NCBI nr
Match: gi|902203445|gb|KNA14555.1| (hypothetical protein SOVF_106390 [Spinacia oleracea])

HSP 1 Score: 195.3 bits (495), Expect = 7.000e-47
Identity = 97/135 (71.85%), Postives = 113/135 (83.70%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKLIKMARKWQKLAA+SR+RISWPR +AN+GHF+VYT D +RFMIPLT+LKN+I  
Sbjct: 1   MISTKKLIKMARKWQKLAASSRKRISWPRPMANEGHFVVYTEDGRRFMIPLTFLKNKIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           ELLR+AEEEFG+    PI +PC S FMEY+IS+IQR  A+DLE ALITSLA CRYSSSS+
Sbjct: 61  ELLRIAEEEFGVTSSGPIKMPCDSNFMEYVISMIQRCAAKDLEMALITSLASCRYSSSSH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQEQ    + I SF
Sbjct: 121 EHQEQTKPHMYICSF 135

[Close]

BLAST of Spo11790.1 vs. NCBI nr
Match: gi|902203450|gb|KNA14560.1| (hypothetical protein SOVF_106440 [Spinacia oleracea])

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-46
Identity = 96/135 (71.11%), Postives = 110/135 (81.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MIST+KLIKMARKWQK+AAASR+RISWPR VAN+GHF+VYT D KRFMIPLTYLK+ I  
Sbjct: 1   MISTRKLIKMARKWQKIAAASRKRISWPRPVANEGHFVVYTADGKRFMIPLTYLKSAIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFG+    PITLPC S FMEYI+S+IQR +A DLE ALI SLA CRYSS  +
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYIVSMIQRRVAEDLEMALIMSLATCRYSSLLH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQE  N Q+ + SF
Sbjct: 121 EHQEHTNPQMFVCSF 135

[Close]

BLAST of Spo11790.1 vs. NCBI nr
Match: gi|731357566|ref|XP_010690279.1| (PREDICTED: uncharacterized protein LOC104903852 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 193.4 bits (490), Expect = 2.600e-46
Identity = 95/135 (70.37%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKLIKMARKWQK+AAASR+RISWPRS+AN+GHF+VYTTD +RFMIPL YLK EI  
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRSLANEGHFVVYTTDGRRFMIPLKYLKTEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL ++A+EE+G+    PITLPC S FMEY+IS++QRH+  DLEKALI SLA C+YSS S 
Sbjct: 61  ELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLAACKYSSLSL 120

Query: 121 EHQEQNNQQLCIHSF 136
           E+QEQ N  L I SF
Sbjct: 121 ENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R709_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106460 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.500e-48
Identity = 99/135 (73.33%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKL+KMARKWQK+AAASR+RISWPR VA+KGHF+VYTTD +RF+IPL YLK+EI  
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFGL    PITLPC S FMEY IS+IQR +A DLEKALI SLA CRYSS S+
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQ+Q N  L I SF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089570 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.300e-47
Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKL+KMARKWQK+AAASR+RISWPR VA+KGHF+VYTTD +RF+IPL YLKNEI  
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKNEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFGL    PITLPC S FMEY IS+IQR +A DL KALI SLA CRYSS ++
Sbjct: 61  ELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVTH 120

Query: 121 EHQEQNNQQLCIHSF 136
           E+Q+Q N Q+ I SF
Sbjct: 121 EYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4X7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106390 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.900e-47
Identity = 97/135 (71.85%), Postives = 113/135 (83.70%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKLIKMARKWQKLAA+SR+RISWPR +AN+GHF+VYT D +RFMIPLT+LKN+I  
Sbjct: 1   MISTKKLIKMARKWQKLAASSRKRISWPRPMANEGHFVVYTEDGRRFMIPLTFLKNKIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           ELLR+AEEEFG+    PI +PC S FMEY+IS+IQR  A+DLE ALITSLA CRYSSSS+
Sbjct: 61  ELLRIAEEEFGVTSSGPIKMPCDSNFMEYVISMIQRCAAKDLEMALITSLASCRYSSSSH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQEQ    + I SF
Sbjct: 121 EHQEQTKPHMYICSF 135

[Close]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106440 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.300e-47
Identity = 96/135 (71.11%), Postives = 110/135 (81.48%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MIST+KLIKMARKWQK+AAASR+RISWPR VAN+GHF+VYT D KRFMIPLTYLK+ I  
Sbjct: 1   MISTRKLIKMARKWQKIAAASRKRISWPRPVANEGHFVVYTADGKRFMIPLTYLKSAIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL R+AEEEFG+    PITLPC S FMEYI+S+IQR +A DLE ALI SLA CRYSS  +
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYIVSMIQRRVAEDLEMALIMSLATCRYSSLLH 120

Query: 121 EHQEQNNQQLCIHSF 136
           EHQE  N Q+ + SF
Sbjct: 121 EHQEHTNPQMFVCSF 135

[Close]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213060 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.800e-46
Identity = 95/135 (70.37%), Postives = 112/135 (82.96%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVANKGHFIVYTTDAKRFMIPLTYLKNEIVS 60
           MISTKKLIKMARKWQK+AAASR+RISWPRS+AN+GHF+VYTTD +RFMIPL YLK EI  
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRSLANEGHFVVYTTDGRRFMIPLKYLKTEIFI 60

Query: 61  ELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPCRYSSSSY 120
           EL ++A+EE+G+    PITLPC S FMEY+IS++QRH+  DLEKALI SLA C+YSS S 
Sbjct: 61  ELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLAACKYSSLSL 120

Query: 121 EHQEQNNQQLCIHSF 136
           E+QEQ N  L I SF
Sbjct: 121 ENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.500e-30
Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS-------VANKGHFIVYTTDAKRFMIPLTY 60
           M++TKKLIKMA+KWQ+ AA  R+RIS+ RS        A KG F+VYTTD+ RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPC 120
           L N +  ELL+++EEEFGL    PIT P  S+F+EY+I ++QR +  D EKAL+ S++  
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYSSS-SYEHQEQNNQQLCI 133
           R SS  S + QE++ QQL +
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.500e-29
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS--------VANKGHFIVYTTDAKRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+RIS+ RS           KG F+VYT D  RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N IV ELL+++EEEFGL  + PITLP  S+F+EY+I +IQR +  D EKAL+ S++ 
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CRYS-SSSYEHQEQNNQQLCI 133
            + S   S   QEQ+ QQL +
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Match: SAU61_ARATH (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana GN=SAUR61 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.100e-28
Identity = 67/139 (48.20%), Postives = 98/139 (70.50%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSV--------ANKGHFIVYTTDAKRFMIPLT 60
           M++TKKL+KMA+KWQ+ AA  R+RIS+ RS         A KG F+VYT+D  RF  P++
Sbjct: 1   MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N ++ ELL+++EEEFG+  + PITLP  S+F+EY+I ++QR +  D EKALITS++ 
Sbjct: 61  YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISS 120

Query: 121 CRYS-SSSYEHQEQNNQQL 131
            R S   S++ QE ++ +L
Sbjct: 121 TRCSLPCSFQLQEHSSTRL 139

[Close]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-28
Identity = 66/140 (47.14%), Postives = 90/140 (64.29%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS--------VANKGHFIVYTTDAKRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+RIS+ RS           KG F+VYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N +V ELL+++EE+FGL  + PITLP  S F+EY++ +IQR +  D EKAL+ S++ 
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYSSSSYEHQEQNNQQLCI 133
            R S    E Q    QQL +
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Match: SAU65_ARATH (Auxin-responsive protein SAUR65 OS=Arabidopsis thaliana GN=SAUR65 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.500e-28
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVAN---------------KGHFIVYTTDAK 60
           MI+TKKL+KMA+KWQ+ AA  R+RIS+ RS                  KG F+VYT D  
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKA 120
           RF  PL+YL N +  ELL+++EEEFGL    PITLP  S+F+EY+I  I+R +  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LITSLAPCRYSSSSYEHQEQNNQQLCI 133
           L+ S++  R S    E Q    QQL +
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

[Close]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 132.1 bits (331), Expect = 2.600e-31
Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS-------VANKGHFIVYTTDAKRFMIPLTY 60
           M++TKKLIKMA+KWQ+ AA  R+RIS+ RS        A KG F+VYTTD+ RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAPC 120
           L N +  ELL+++EEEFGL    PIT P  S+F+EY+I ++QR +  D EKAL+ S++  
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYSSS-SYEHQEQNNQQLCI 133
           R SS  S + QE++ QQL +
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.9 bits (320), Expect = 4.800e-30
Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS--------VANKGHFIVYTTDAKRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+RIS+ RS           KG F+VYT D  RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N IV ELL+++EEEFGL  + PITLP  S+F+EY+I +IQR +  D EKAL+ S++ 
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CRYS-SSSYEHQEQNNQQLCI 133
            + S   S   QEQ+ QQL +
Sbjct: 122 AKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Match: AT1G29420.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 6.300e-30
Identity = 67/139 (48.20%), Postives = 98/139 (70.50%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSV--------ANKGHFIVYTTDAKRFMIPLT 60
           M++TKKL+KMA+KWQ+ AA  R+RIS+ RS         A KG F+VYT+D  RF  P++
Sbjct: 1   MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N ++ ELL+++EEEFG+  + PITLP  S+F+EY+I ++QR +  D EKALITS++ 
Sbjct: 61  YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISS 120

Query: 121 CRYS-SSSYEHQEQNNQQL 131
            R S   S++ QE ++ +L
Sbjct: 121 TRCSLPCSFQLQEHSSTRL 139

[Close]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.800e-29
Identity = 66/140 (47.14%), Postives = 90/140 (64.29%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRS--------VANKGHFIVYTTDAKRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+RIS+ RS           KG F+VYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKALITSLAP 120
           YL N +V ELL+++EE+FGL  + PITLP  S F+EY++ +IQR +  D EKAL+ S++ 
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYSSSSYEHQEQNNQQLCI 133
            R S    E Q    QQL +
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Match: AT1G29460.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.2 bits (313), Expect = 3.100e-29
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQKLAAASRRRISWPRSVAN---------------KGHFIVYTTDAK 60
           MI+TKKL+KMA+KWQ+ AA  R+RIS+ RS                  KG F+VYT D  
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKNEIVSELLRMAEEEFGLAGDRPITLPCHSIFMEYIISVIQRHIARDLEKA 120
           RF  PL+YL N +  ELL+++EEEFGL    PITLP  S+F+EY+I  I+R +  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LITSLAPCRYSSSSYEHQEQNNQQLCI 133
           L+ S++  R S    E Q    QQL +
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

The following BLAST results are available for this feature:

BLAST of Spo11790.1 vs. NCBI nr
BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
BLAST of Spo11790.1 vs. TAIR (Arabidopsis)

BLAST of Spo11790.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902203452\|gb\|KNA14562.1\|	2.2e-48	73.3	hypothetical protein SOVF_1064...	[more]
gi\|902210322\|gb\|KNA16394.1\|	1.8e-47	71.8	hypothetical protein SOVF_0895...	[more]
gi\|902203445\|gb\|KNA14555.1\|	7.0e-47	71.8	hypothetical protein SOVF_1063...	[more]
gi\|902203450\|gb\|KNA14560.1\|	1.2e-46	71.1	hypothetical protein SOVF_1064...	[more]
gi\|731357566\|ref\|XP_010690279.1\|	2.6e-46	70.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo11790.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R709_SPIOL	1.5e-48	73.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9RBK5_SPIOL	1.3e-47	71.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9R4X7_SPIOL	4.9e-47	71.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9R4Y0_SPIOL	8.3e-47	71.1	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMV1_BETVU	1.8e-46	70.3	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo11790.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU64_ARATH	4.5e-30	50.7	Auxin-responsive protein SAUR6...	[more]
SAU67_ARATH	8.5e-29	49.6	Auxin-responsive protein SAUR6...	[more]
SAU61_ARATH	1.1e-28	48.2	Auxin-responsive protein SAUR6...	[more]
SAU63_ARATH	3.2e-28	47.1	Auxin-responsive protein SAUR6...	[more]
SAU65_ARATH	5.5e-28	46.2	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11790.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29450.1	2.6e-31	50.7	SAUR-like auxin-responsive pro...	[more]
AT1G29510.1	4.8e-30	49.6	SAUR-like auxin-responsive pro...	[more]
AT1G29420.1	6.3e-30	48.2	SAUR-like auxin-responsive pro...	[more]
AT1G29440.1	1.8e-29	47.1	SAUR-like auxin-responsive pro...	[more]
AT1G29460.1	3.1e-29	46.2	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..93 score: 2.6
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..135 score: 1.5
None	No IPR available	PANTHER	PTHR31175:SF13	SUBFAMILY NOT NAMED	coord: 2..135 score: 1.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11789	0.74	Barchart \| Table
Spo11788	0.69	Barchart \| Table