Spo11804 (gene)

Overview
NameSpo11804
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 111330323 .. 111332203 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGCCCAACAAGAATATGGCCCTTTTGGGCTTCTTTACCATGCTACACAGGTAACACAGCTACAGATCTACAGGACTACAGCCTACCATGGTAAAACTCCAATTGTTCCTTGATTATTCAAAAAGATCGGAATATATTCTGGGAATTAAAATCTAGCGGCAGACTGAATAAATAATGTTGGACAATTAAGTTAACGCCATGTAAAAAATTATATCATTCCTTGTAATAGCCTCAACTCCCTTCGATTCTTGATAATAACTATTGCTGAGGATAAAATAGTTACAGGAATATCTTAGAGGATTGAATATCATACTAAGTATACAATTATGTTATCTTCAACAATTATTTAGGAGTTAGGTGTCCTCTCGATTCTTAATAGTGTTTCCTAATGTATTTTTTTTCTTACTTTTCAAAAATAAAAAAACAACTAAAAATGTCAGAATTTTTATCTTCTCGGATTGCAAAGTAAAATAATAATTTCAGGTCGAGTTATGTCCTGGGAGCATTTTACATTGGTTGGTTTTCAAAAGGGCTCTTGGAGTGGCTCTCCAATCTTTTCTACCACCATCTCTCTACAAGACACTCTCACGAACTCCTTCTGAAAAATACCCAACATTGATTGATTCTTCAAAATAGTTCTTCAGTCTCTTTTTTACTATTTGGTGGTCCACATGTTCATAATCAATTTTCACAACCAAAGTTATTTTTCACTTTTCAACTAGAATCAATTATTGGAGGTGTCTTGAAGAGCCCCAATATTGGCCAATAGATAATTCTTATTGGAGAACTACCTGGAGAGCTACTTAGAGTGCGTTCTGTTCACCTTAAAAAAATAAGTTTTAGGTCCAATAAGTTCAGATAAATTCCAATAAGTTCATATAAGTTCCAATAAGTTAAGATAAGTTCTAGTAAGTTTCAGTAATAACAATAATAATTACTCTGTGTTTGATAATTATAATTATACGGAGTAATTATTATTTATCATTTATCATTTATTTTTATTATTTATTATTATTATTGTAATTTATTAATATATTATATTATTAGTTATTATTATTATTATTTTATTATTATTTTTATTACATTATTTTATTACTCCGTATTATTATTATTAATTAATACTACCTCCGTTTCAAAATGATCTTTACACTTTCCGTTTTAATCCGTTTCAAAATGATCTTTACACTTTCCGTTTTAATCCGTTTCATAATGTTCTTTACACTTTGCTTTATTCCATTTTTGCACATGAAAATTTACTGCCTTATCCTTCTTACCCCACAATATTTACAATTTTCTATTCACTTTTTCTTACTTTATTCATTTTTTTTCTTACACACACGCTCATTTTTCCACATATATCATAGTTTATCCATATTTCATTATATTCAACCAACTTTTCTACTTTTGTATTAATATTTATGCAAATAGTAACTGCAAAGATCTAATAAAACGGAGGTAGTAATAATTAAGAATTACTAATCAATAATAAGTTCCAATAAGTTTAGATGGGCTCAGATAGTTTTCAATAAGTTCAGATCAGATAAATTAATGTCAAATAAGTTGAATAGAACTACTCTTACAGGAGTCACTCCAAGAGGCTCAATATACATGCTCTCGGACAAGTATTTTAGATTTAAACCCGAAAAATCGGATAGGATAATGATAATCGGGTACGGGCTGGGCATCAATTTTGTCATAGTGTGACCTCTGAGACTCTGACCTCGAAAGAGAGAGAAAAACGTAATCCAATTGGGAAGAAAGGAGAGGGACGTGGCAAGACTAAGATCAGAGTATGTGAGTTCACTTTTCGTCCACACCCTTTCTTCCTTCTTCTCTTTCCATTCCAAGTTTCCAACTGTGAAGAGTACTCAAAATAA

mRNA sequence

ATGTTGGCCCAACAAGAATATGGCCCTTTTGGGCTTCTTTACCATGCTACACAGGATAATGATAATCGGGTACGGGCTGGGCATCAATTTTGTCATAGTGTGACCTCTGAGACTCTGACCTCGAAAGAGAGAGAAAAACGTAATCCAATTGGGAAGAAAGGAGAGGGACGTGGCAAGACTAAGATCAGAGTATGTGAGTTCACTTTTCGTCCACACCCTTTCTTCCTTCTTCTCTTTCCATTCCAAGTTTCCAACTGTGAAGAGTACTCAAAATAA

Coding sequence (CDS)

ATGTTGGCCCAACAAGAATATGGCCCTTTTGGGCTTCTTTACCATGCTACACAGGATAATGATAATCGGGTACGGGCTGGGCATCAATTTTGTCATAGTGTGACCTCTGAGACTCTGACCTCGAAAGAGAGAGAAAAACGTAATCCAATTGGGAAGAAAGGAGAGGGACGTGGCAAGACTAAGATCAGAGTATGTGAGTTCACTTTTCGTCCACACCCTTTCTTCCTTCTTCTCTTTCCATTCCAAGTTTCCAACTGTGAAGAGTACTCAAAATAA

Protein sequence

MLAQQEYGPFGLLYHATQDNDNRVRAGHQFCHSVTSETLTSKEREKRNPIGKKGEGRGKTKIRVCEFTFRPHPFFLLLFPFQVSNCEEYSK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo11804.1Spo11804.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo11804.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11804.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11804.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo11804.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010731 protein glutathionylation
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0009636 response to toxic substance
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009407 toxin catabolic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo255030.73Barchart | Table
Spo176680.70Barchart | Table
Spo019670.69Barchart | Table
Spo152440.69Barchart | Table