Spo12023 (gene) | SpinachBase

Overview


Name	Spo12023
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	FAD/NAD(P)-binding oxidoreductase family protein
Location	chr4 : 8140645 .. 8144860 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGTCCCTTCGAAAACCTCCCCCCAAAAAACAAACCTTTCCTCTTCCCTTCGTAAGCTAAAACATTCTTTCTAGGGTTCATACTCAAATTGATTTGTGCGTGAAAAGTTCCAATTGCAAGATGAAAATGCGGGAAAATAAGGGAGGTGCGAAAGCAGCAGTTCAAGGAGGAGGAGGAAGTTCTTCCAGAAGTGGTTTGGAATTAAATGGCATACCATTGGATTTTCGCTCTATTATGAAGGAGGTTGAACTTCTTGGTAAATTTCCCCCCTTTTCATCTTTCAATTTCTGCTACTTTTGTTTTTTTTAATGATTTTTATTGCTAGTTACGAGTACTGAACTATAATCTTAAGTATTGAATTAGAAGATTTCTGTAATGTGTTAAAATTTGCTTGATTAAATTTGTAATTTGGGTTTGATATGATTGAATCTTCGATTTTCTTTTTCCTTCTGGAATGCGATGTTCGGTGTAAATTTGCAGAATTTAGGAATTGGGCTTAGGTTATGACATAGTGTATAACCTGAATGAGACTATTGGGATTGTGATTTTAGCTTTTGTCATACGATATAACCGGTTGTACGATACAAATTATCGAAGGGAACTGGATAGGAATACAATGTTTGGTGTAAATTTGCAGAATTTAGGAATTGGGCTTAGGTTATGACAACCTGAATGAGACTATTGGGATTTTGATTTTAGCTTTTGTCGTAAGATATAACCGGTTGTACAATACAAATCATCGAAGGGAGCTGGACTTGAATACAATGTTTGGTGTAAATTTGCAGAATTTAGGAATTGGGATTAGGTTATGACAGTGTATGGCCTAAATAAGACTATTGGGATTGTTATTTTAGCTTTTTTCATATGATACAACCGGTTGTTTTATATAAATTGTCGAAGGGAACAGTGGTAGTGCAACCAACTAACCAAAGAGCAAGAACCTAACTAGCTGAAATAGAGCTGAAACTGATAAGTTAATTGAAATCGATAAGATAGGAACTGAAGCTGATAAATAGCTGAACCGAGAAGGTAACTAATTAGGTACATTGTTTGGTAAAACTTATTTTTTAAGTAGCTGAAAATTTTAAAATACTTTTGAGAATTGTATATTACAGTAGTATATATATTTATCAAATAAAATTACAGTATACGTGTATAATTATACACGGAGTAATTCATGAGTGATTACTTGTGGTATTACAAACAGAAGAGTAAAGTTTGTTTTACAAAAATAAAAGAAAAAGGAAGAGTAAAGTGTGTTGATGGACATACCGTTATACTGGTTCTTCAACCTTCACCAAGAAATGGAAGCCAATCCTCCATTTCTTTTGACGCCTATCCGCCATGCGATTGATCTAATGGAAAACTTAATCTAGTTTCGTTAGAGTTGAATTTTAAATGGATTTCTACTCAGTTTAAAAATAATTATTTCCACCCTTCCCCGGCACAGGCGGCATATGGTTTCCGATGGTTCAGTTTTTGCCATCTCATAGCACTGCACCGCCGTTACGTTCCTAACAATCGACCACAACGCTTAGTTCCTCTTGCATTCCCATAGAATACAACTTCCTACTTGACCGCCGCATAGTTCTTGGGGCACTACGGTCCACCAGGGGATTTGAACCAGAAGATATGAAATTGTAGAAAGGATAAAAAAAAGTTAAAAACAAAGAAATTCCAAGTCCTATTTTTCAAACGTTAGTTTGATTAACGTTCCAATTTCAGCTACTTTTTGCACCTTAAATCTAATTTCACGTAGTTATCAAACACAACTAATCATTTAAGCTCGCTTAAAATTTCAGCATCTTATCATTTAAGTCACCTTAAATGAGTTGCCAAACAGAGCCTAAGTTTTTGACATTCTTGGAAGTTGAATGTGAGTGCCTGCCTTGGCTTACATTCGATGATTGAAACTGTTCTGCTAGGGTAATGAAGTACCAATACCGACCGGTTGTATAATAGAAATTGTCGAAGGGAACAATGGTAGTGCAACCGACTAATCAAAGAGCAAGAACTTTAGTTTTTTTACCGTCCTTGGAAGTTGAAATTGAGTGCTTGCCTTTTGATGATAGAAACTATTCTGCCAGAGTAATGAAGTACCTTTTTCTCTAGTTTCTCAGTATCCAACTAGAATTTTAGGGGGTGGGGGATGCAGGATGCGGCATATGTGGTACATATCTTTTACAAAAGCACTGTGAATAAGTTTTATTGTGAGAGATGTAAGCCTAAAAAATGTACGACAAGAATGTATTGTTACCCCTAAATAGTAAAGATGCTGTGTTTTATTCGTATCTTCCACTGATAGGAAATCAGTGACAACAAACAAATACGACAAATAGTGCACTAAAATGAATTCAAGGACAAATCATAACTTAAAATTAATTTTAATGAATTGAAATCTATATATTGCGGAAACGTGTGTGCCTTAGACTATACTCCTCACTCCTGAATCCCAAGGACACTATACCTTAAATTAAACTTGAGACTAGCGAGTTGTTCTAATGTTTTTCTTTTTCTTTTTTTCCGGTAAGCAAGCAATTTTATTTCTCAAAAGATCAACTTCATACAACAGGGAACTAAAGGGGAAACAAACCATCTAGGATGATCTCTATTCCCTCTAGAACCAAGAAACGTACATAGTACAAGTCAAACCGGCAAAAACCAAAATACAACTATTTGACTGACAACTAAAGAGCGGCAAACCAAACCTGATCAGATTGTGACACTTTCTTACTCATAATACTCTTGACTCTAAGCCTAATAATCATACCTTGATTCCTTAAGTACTCTTCACAAAAGAGTCCCACTGTAACCACCTTTTGCTCCCGTAACGCTTTCACATTCTTCCTAAACTGAGATCTTCGGGTTTTCAAATGTATTGCTGGTAACTAAACATTATGTTACACTGCAGGCTCCTCTGATATGACATGGAAAGAGAGGAAGAATTTGCAGAATCAGAAAGTCGTTTCATTGGGCGGAAAGGTAAGGGATGTTGACTTATCCCTTGTGTTTTAATGCTAATCTGAACTCTTTGAGTGAACCATTTGCTGACAACGATTATGTTATGTTTATCTGTTAAAAGGCTCCTAAGAAACAGAGACTACCACTTAGTGTAGCACGGCCAATGATGAAGAATCAAAAGAAGAAGGAAGAGAAGTTGTTGCAACAGGTTGTGATTTCAGATATGAACTTTAATCTGTTATGAATTTGCTAGATTTTGTTATTACCCCCTCCGTCCCAAAATTATAGTCTTGTTTTCTATTTCAGGCGTCCCAAATTTATAGTTCTGTTTCCTTATTTGGACATTATTCTTCCCACTTTCCCATACACTTTCCCATATACGAAGTACTATATTCCACTTTTCTTAAAACTCGTGTTTTTAGTCAAACGGGACTATAAATTGGGATGGAGGGAGTAGTTAATTTAAAGTGGAAACTTGCTGACAGTAACTTTCTGCAGGAGTTACTTATCGGACATTGTGGGGAAAATCTCATCAAAAGGACCAAAAAACCCGAAGAGAAGCGCAGGCCTGAAGACGGAGTGCTGAAATCAAGCGAAGGGCGTTTCCGAAATGGAATTCTTGATGTTAAACATTTACTAAAATCTGCTCCACCTCCAAGGAACGATGATGATAGGGGTCCTCCTAAGGCCAGCAAAGGGAGAAAAAAGAAGGGTGGTAAAAAGAAGGGTGGCAAGAAGGGCGGTGGTGGTGGCGGCGGCGGTGGTGGACGTGGTGGGAAAAAGCGTCACTAAGAAGATTATTGTGCCAAATTCCGTGGCGGTGGCAGTGGCGGTGGTGGTGGATAAGCTGGTGTCGGATTTTTAGTGGAGAGAGGATGATGATGATGGGTGTGGCATGCTTAGAAGGATTTCAAATTCAACTGACTTATCTTTCCAAGTCTAAAATTTGGGCCAAATTCAATGTAGATCCTTCTGTTTTCTCCAAATTGGCTATTTGGGGTGATGAAATGATGGTTTCCAAACACACGAGTATCATATTCTTTTGGAAATTTGATTGAATCGTGTAGTTTTAACCTTTATAATGTCATCATATTTGTTTTCGCTTACTGTTTGACTTGTATTATTTAGAATAATTAACTAGTAGTTCAAAAAATTAATATTAAGGTATGTACTCCGAATTTTTTACATGTGTAGAAATGGAATTTAAAACATTGATATTTATACAAATTGAATTCAGAATTCTCAGCAACTTCA

mRNA sequence

GTCGTCCCTTCGAAAACCTCCCCCCAAAAAACAAACCTTTCCTCTTCCCTTCGTAAGCTAAAACATTCTTTCTAGGGTTCATACTCAAATTGATTTGTGCGTGAAAAGTTCCAATTGCAAGATGAAAATGCGGGAAAATAAGGGAGGTGCGAAAGCAGCAGTTCAAGGAGGAGGAGGAAGTTCTTCCAGAAGTGGTTTGGAATTAAATGGCATACCATTGGATTTTCGCTCTATTATGAAGGAGGTTGAACTTCTTGGCTCCTCTGATATGACATGGAAAGAGAGGAAGAATTTGCAGAATCAGAAAGTCGTTTCATTGGGCGGAAAGGCTCCTAAGAAACAGAGACTACCACTTAGTGTAGCACGGCCAATGATGAAGAATCAAAAGAAGAAGGAAGAGAAGTTGTTGCAACAGGAGTTACTTATCGGACATTGTGGGGAAAATCTCATCAAAAGGACCAAAAAACCCGAAGAGAAGCGCAGGCCTGAAGACGGAGTGCTGAAATCAAGCGAAGGGCGTTTCCGAAATGGAATTCTTGATGTTAAACATTTACTAAAATCTGCTCCACCTCCAAGGAACGATGATGATAGGGGTCCTCCTAAGGCCAGCAAAGGGAGAAAAAAGAAGGGTGGTAAAAAGAAGGGTGGCAAGAAGGGCGGTGGTGGTGGCGGCGGCGGTGGTGGACGTGGTGGGAAAAAGCGTCACTAAGAAGATTATTGTGCCAAATTCCGTGGCGGTGGCAGTGGCGGTGGTGGTGGATAAGCTGGTGTCGGATTTTTAGTGGAGAGAGGATGATGATGATGGGTGTGGCATGCTTAGAAGGATTTCAAATTCAACTGACTTATCTTTCCAAGTCTAAAATTTGGGCCAAATTCAATGTAGATCCTTCTGTTTTCTCCAAATTGGCTATTTGGGGTGATGAAATGATGGTTTCCAAACACACGAGTATCATATTCTTTTGGAAATTTGATTGAATCGTGTAGTTTTAACCTTTATAATGTCATCATATTTGTTTTCGCTTACTGTTTGACTTGTATTATTTAGAATAATTAACTAGTAGTTCAAAAAATTAATATTAAGGTATGTACTCCGAATTTTTTACATGTGTAGAAATGGAATTTAAAACATTGATATTTATACAAATTGAATTCAGAATTCTCAGCAACTTCA

Coding sequence (CDS)

ATGAAAATGCGGGAAAATAAGGGAGGTGCGAAAGCAGCAGTTCAAGGAGGAGGAGGAAGTTCTTCCAGAAGTGGTTTGGAATTAAATGGCATACCATTGGATTTTCGCTCTATTATGAAGGAGGTTGAACTTCTTGGCTCCTCTGATATGACATGGAAAGAGAGGAAGAATTTGCAGAATCAGAAAGTCGTTTCATTGGGCGGAAAGGCTCCTAAGAAACAGAGACTACCACTTAGTGTAGCACGGCCAATGATGAAGAATCAAAAGAAGAAGGAAGAGAAGTTGTTGCAACAGGAGTTACTTATCGGACATTGTGGGGAAAATCTCATCAAAAGGACCAAAAAACCCGAAGAGAAGCGCAGGCCTGAAGACGGAGTGCTGAAATCAAGCGAAGGGCGTTTCCGAAATGGAATTCTTGATGTTAAACATTTACTAAAATCTGCTCCACCTCCAAGGAACGATGATGATAGGGGTCCTCCTAAGGCCAGCAAAGGGAGAAAAAAGAAGGGTGGTAAAAAGAAGGGTGGCAAGAAGGGCGGTGGTGGTGGCGGCGGCGGTGGTGGACGTGGTGGGAAAAAGCGTCACTAA

Protein sequence

MKMRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGGGGGGGGRGGKKRH

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12023.1	Spo12023.1	mRNA

Homology

[Close]

BLAST of Spo12023.1 vs. NCBI nr
Match: gi|902222171|gb|KNA19110.1| (hypothetical protein SOVF_064710 [Spinacia oleracea])

HSP 1 Score: 353.2 bits (905), Expect = 2.900e-94
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1


		  
Query: 3   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 62
           MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK
Sbjct: 1   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 60

Query: 63  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 122
           VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP
Sbjct: 61  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 120

Query: 123 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 182
           EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG
Sbjct: 121 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 180

Query: 183 GGGGGGRGGKKRH 196
           GGGGGGRGGKKRH
Sbjct: 181 GGGGGGRGGKKRH 193

[Close]

BLAST of Spo12023.1 vs. NCBI nr
Match: gi|731325979|ref|XP_010673790.1| (PREDICTED: uncharacterized protein LOC104890117 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.5 bits (680), Expect = 3.600e-68
Identity = 153/195 (78.46%), Postives = 165/195 (84.62%), Query Frame = 1


		  
Query: 1   MKMRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQN 60
           MKMRE KGGAK      GGSSSRSGLELNGIPL+F SIMKEV+LLGSSDMTWKERK+LQN
Sbjct: 1   MKMREKKGGAKPE----GGSSSRSGLELNGIPLNFHSIMKEVQLLGSSDMTWKERKDLQN 60

Query: 61  QKVVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKR 120
           +KV SLGGKA K QRLPLSVARPMMKNQKK+EEK+L+QE+LIGHCGENLIKRTKKPEEKR
Sbjct: 61  KKVASLGGKAIKSQRLPLSVARPMMKNQKKREEKMLEQEILIGHCGENLIKRTKKPEEKR 120

Query: 121 RPEDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGG 180
           RPEDGVLKSSEGRFRNG+LDVKHLL++APP R+DD   PP  SKG KKKGGKKK      
Sbjct: 121 RPEDGVLKSSEGRFRNGVLDVKHLLRAAPPSRDDDRGPPPMVSKGMKKKGGKKK------ 180

Query: 181 GGGGGGGGRGGKKRH 196
            GG G    GGKKRH
Sbjct: 181 -GGNGNRKGGGKKRH 184

[Close]

BLAST of Spo12023.1 vs. NCBI nr
Match: gi|870863470|gb|KMT14634.1| (hypothetical protein BVRB_4g074020 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 262.7 bits (670), Expect = 5.100e-67
Identity = 151/193 (78.24%), Postives = 163/193 (84.46%), Query Frame = 1


		  
Query: 3   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 62
           MRE KGGAK      GGSSSRSGLELNGIPL+F SIMKEV+LLGSSDMTWKERK+LQN+K
Sbjct: 1   MREKKGGAKPE----GGSSSRSGLELNGIPLNFHSIMKEVQLLGSSDMTWKERKDLQNKK 60

Query: 63  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 122
           V SLGGKA K QRLPLSVARPMMKNQKK+EEK+L+QE+LIGHCGENLIKRTKKPEEKRRP
Sbjct: 61  VASLGGKAIKSQRLPLSVARPMMKNQKKREEKMLEQEILIGHCGENLIKRTKKPEEKRRP 120

Query: 123 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 182
           EDGVLKSSEGRFRNG+LDVKHLL++APP R+DD   PP  SKG KKKGGKKK       G
Sbjct: 121 EDGVLKSSEGRFRNGVLDVKHLLRAAPPSRDDDRGPPPMVSKGMKKKGGKKK-------G 180

Query: 183 GGGGGGRGGKKRH 196
           G G    GGKKRH
Sbjct: 181 GNGNRKGGGKKRH 182

[Close]

BLAST of Spo12023.1 vs. NCBI nr
Match: gi|225435882|ref|XP_002264937.1| (PREDICTED: uncharacterized protein LOC100249562 [Vitis vinifera])

HSP 1 Score: 159.8 bits (403), Expect = 4.700e-36
Identity = 92/149 (61.74%), Postives = 109/149 (73.15%), Query Frame = 1


		  
Query: 33  LDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQRLPLSVARPMMKNQKKKE 92
           +D R IMKE+E LGSS MTWKERK L+N+K+VSLGGK PKKQRLPLSVAR  MKNQK++E
Sbjct: 18  MDMRKIMKEIEFLGSSRMTWKERKELENKKIVSLGGKPPKKQRLPLSVARAQMKNQKERE 77

Query: 93  EKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRFRNGILDVKHLLKSAPPPR 152
           +K+LQ+ L++G     L   TK+  E+R PED VLKSSEG FRNG+LDVKHLL S P   
Sbjct: 78  QKMLQENLILGRFERKLGGGTKRAVERRMPEDRVLKSSEGHFRNGVLDVKHLLHSGPSRN 137

Query: 153 NDDDRGPPKASKGRKKKGGKKKGGKKGGG 182
           N+        SKG+KKKGG K    KGGG
Sbjct: 138 NESSSS--YISKGKKKKGGGKNKRSKGGG 164

[Close]

BLAST of Spo12023.1 vs. NCBI nr
Match: gi|661879317|emb|CDP16973.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 157.9 bits (398), Expect = 1.800e-35
Identity = 97/167 (58.08%), Postives = 121/167 (72.46%), Query Frame = 1


		  
Query: 15  QGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQ 74
           Q  GG SS S  +  G  +DF+SIMK++E LGS+ MTWKE+K L+N+KVVSLGGK PK+Q
Sbjct: 6   QVSGGVSSTSHTDDGGSKMDFKSIMKDIEFLGSTHMTWKEKKELENKKVVSLGGKPPKRQ 65

Query: 75  RLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRF 134
           RLPLSVAR  MK QK++EEK+LQ+ L++G    N  +  KK E +R  ED VLKS+EG F
Sbjct: 66  RLPLSVARVSMKRQKEREEKMLQENLILGRFSSNRGRDAKKTE-RRSSEDRVLKSTEGHF 125

Query: 135 RNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGG 182
           RNG+LDVKHLL+ +  PR DD R P    K +KKKGGKK  GK+ GG
Sbjct: 126 RNGVLDVKHLLRPS-APRVDDSR-PVADKKKKKKKGGKKTRGKRNGG 169

[Close]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064710 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.000e-94
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1


		  
Query: 3   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 62
           MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK
Sbjct: 1   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 60

Query: 63  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 122
           VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP
Sbjct: 61  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 120

Query: 123 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 182
           EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG
Sbjct: 121 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 180

Query: 183 GGGGGGRGGKKRH 196
           GGGGGGRGGKKRH
Sbjct: 181 GGGGGGRGGKKRH 193

[Close]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRJ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074020 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.600e-67
Identity = 151/193 (78.24%), Postives = 163/193 (84.46%), Query Frame = 1


		  
Query: 3   MRENKGGAKAAVQGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQK 62
           MRE KGGAK      GGSSSRSGLELNGIPL+F SIMKEV+LLGSSDMTWKERK+LQN+K
Sbjct: 1   MREKKGGAKPE----GGSSSRSGLELNGIPLNFHSIMKEVQLLGSSDMTWKERKDLQNKK 60

Query: 63  VVSLGGKAPKKQRLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRP 122
           V SLGGKA K QRLPLSVARPMMKNQKK+EEK+L+QE+LIGHCGENLIKRTKKPEEKRRP
Sbjct: 61  VASLGGKAIKSQRLPLSVARPMMKNQKKREEKMLEQEILIGHCGENLIKRTKKPEEKRRP 120

Query: 123 EDGVLKSSEGRFRNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGGG 182
           EDGVLKSSEGRFRNG+LDVKHLL++APP R+DD   PP  SKG KKKGGKKK       G
Sbjct: 121 EDGVLKSSEGRFRNGVLDVKHLLRAAPPSRDDDRGPPPMVSKGMKKKGGKKK-------G 180

Query: 183 GGGGGGRGGKKRH 196
           G G    GGKKRH
Sbjct: 181 GNGNRKGGGKKRH 182

[Close]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Match: D7T1A9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02530 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.300e-36
Identity = 92/149 (61.74%), Postives = 109/149 (73.15%), Query Frame = 1


		  
Query: 33  LDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQRLPLSVARPMMKNQKKKE 92
           +D R IMKE+E LGSS MTWKERK L+N+K+VSLGGK PKKQRLPLSVAR  MKNQK++E
Sbjct: 18  MDMRKIMKEIEFLGSSRMTWKERKELENKKIVSLGGKPPKKQRLPLSVARAQMKNQKERE 77

Query: 93  EKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRFRNGILDVKHLLKSAPPPR 152
           +K+LQ+ L++G     L   TK+  E+R PED VLKSSEG FRNG+LDVKHLL S P   
Sbjct: 78  QKMLQENLILGRFERKLGGGTKRAVERRMPEDRVLKSSEGHFRNGVLDVKHLLHSGPSRN 137

Query: 153 NDDDRGPPKASKGRKKKGGKKKGGKKGGG 182
           N+        SKG+KKKGG K    KGGG
Sbjct: 138 NESSSS--YISKGKKKKGGGKNKRSKGGG 164

[Close]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PP27_GOSAR (Imidazole glycerol phosphate synthase subunit HisH OS=Gossypium arboreum GN=F383_00865 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.200e-35
Identity = 98/165 (59.39%), Postives = 122/165 (73.94%), Query Frame = 1


		  
Query: 34  DFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQRLPLSVARPMMKNQKKKEE 93
           + ++IMK+++ LGSS MTWKERK ++N+KVVSLGGK PK+QRLPLSVA+ +MKNQKK+EE
Sbjct: 21  NIKNIMKDIQFLGSSHMTWKERKEIENRKVVSLGGKPPKRQRLPLSVAKAVMKNQKKREE 80

Query: 94  KLLQQELLIGHCGENLI--KRTKKPEEKRRPEDGVLKSSEGRFRNGILDVKHLLKSAPPP 153
           K+LQ+ +++G     L     TK   +KRRPED VLKSSEG F+NG+LDVKHL   +P  
Sbjct: 81  KMLQENMILGRFRGKLGGGSGTKGSTDKRRPEDRVLKSSEGHFKNGVLDVKHLFHKSPAK 140

Query: 154 RNDDDRGPPKASKGRKKKG-GKKKGGKKGGGGGGGGGGRGGKKRH 196
            ND D  P   +KG+KKKG GKK GGKK       GGGRGGKKRH
Sbjct: 141 DNDFDGHP--FNKGKKKKGSGKKNGGKKK------GGGRGGKKRH 177

[Close]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Match: A0A068VBB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004802001 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.200e-35
Identity = 97/167 (58.08%), Postives = 121/167 (72.46%), Query Frame = 1


		  
Query: 15  QGGGGSSSRSGLELNGIPLDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQ 74
           Q  GG SS S  +  G  +DF+SIMK++E LGS+ MTWKE+K L+N+KVVSLGGK PK+Q
Sbjct: 6   QVSGGVSSTSHTDDGGSKMDFKSIMKDIEFLGSTHMTWKEKKELENKKVVSLGGKPPKRQ 65

Query: 75  RLPLSVARPMMKNQKKKEEKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRF 134
           RLPLSVAR  MK QK++EEK+LQ+ L++G    N  +  KK E +R  ED VLKS+EG F
Sbjct: 66  RLPLSVARVSMKRQKEREEKMLQENLILGRFSSNRGRDAKKTE-RRSSEDRVLKSTEGHF 125

Query: 135 RNGILDVKHLLKSAPPPRNDDDRGPPKASKGRKKKGGKKKGGKKGGG 182
           RNG+LDVKHLL+ +  PR DD R P    K +KKKGGKK  GK+ GG
Sbjct: 126 RNGVLDVKHLLRPS-APRVDDSR-PVADKKKKKKKGGKKTRGKRNGG 169

[Close]

BLAST of Spo12023.1 vs. TAIR (Arabidopsis)
Match: AT2G44820.2 (unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.900e-29
Identity = 81/167 (48.50%), Postives = 103/167 (61.68%), Query Frame = 1


		  
Query: 33  LDFRSIMKEVELLGSSDMTWKERKNLQNQKVVSLGGKAPKKQRLPLSVARPMMKNQKKKE 92
           L F++IMK+V L GSS MTWK++K L+++KV +LGGKA K  RLPLSVAR  MK QK +E
Sbjct: 23  LSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKAQKMHRLPLSVARVQMKKQKDRE 82

Query: 93  EKLLQQELLIGHCGENLIKRTKKPEEKRRPEDGVLKSSEGRFRNGILDVKHLLKSAPPPR 152
           EK+L+Q +++G  G       K  E KR PE+ VLKS+ G F+ G+LDVKHLL+S P   
Sbjct: 83  EKMLEQNVILGRFGGGGSSSRKPAERKRTPEERVLKSTGGIFKGGVLDVKHLLRSGPSSS 142

Query: 153 NDDDRGPPKAS-----------------KGRKKKGGKKKGGKKGGGG 183
           +D D    K S                 KG+KK G  K  GKK GGG
Sbjct: 143 SDRDFKTKKPSRVEKNLGGGGDGGGIKSKGKKKGGKNKNKGKKKGGG 189

The following BLAST results are available for this feature:

BLAST of Spo12023.1 vs. NCBI nr
BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
BLAST of Spo12023.1 vs. ExPASy Swiss-Prot
BLAST of Spo12023.1 vs. TAIR (Arabidopsis)

BLAST of Spo12023.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902222171\|gb\|KNA19110.1\|	2.9e-94	100.	hypothetical protein SOVF_0647...	[more]
gi\|731325979\|ref\|XP_010673790.1\|	3.6e-68	78.4	PREDICTED: uncharacterized pro...	[more]
gi\|870863470\|gb\|KMT14634.1\|	5.1e-67	78.2	hypothetical protein BVRB_4g07...	[more]
gi\|225435882\|ref\|XP_002264937.1\|	4.7e-36	61.7	PREDICTED: uncharacterized pro...	[more]
gi\|661879317\|emb\|CDP16973.1\|	1.8e-35	58.0	unnamed protein product [Coffe...	[more]

BLAST of Spo12023.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RI22_SPIOL	2.0e-94	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CRJ1_BETVU	3.6e-67	78.2	Uncharacterized protein OS=Bet...	[more]
D7T1A9_VITVI	3.3e-36	61.7	Putative uncharacterized prote...	[more]
A0A0B0PP27_GOSAR	1.2e-35	59.3	Imidazole glycerol phosphate s...	[more]
A0A068VBB9_COFCA	1.2e-35	58.0	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo12023.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo12023.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G44820.2	5.9e-29	48.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 33..102 score: 1.1
None	No IPR available	PANTHER	PTHR28096	FAMILY NOT NAMED	coord: 33..187 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0051604	protein maturation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0051301	cell division
biological_process	GO:0006508	proteolysis
biological_process	GO:0040029	regulation of gene expression, epigenetic
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009908	flower development
biological_process	GO:0016458	gene silencing
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0071702	organic substance transport
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0048364	root development
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0008152	metabolic process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0048366	leaf development
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01970	0.73	Barchart \| Table
Spo23898	0.71	Barchart \| Table
Spo04988	0.71	Barchart \| Table
Spo10827	0.70	Barchart \| Table
Spo26672	0.70	Barchart \| Table
Spo18646	0.70	Barchart \| Table
Spo03609	0.70	Barchart \| Table
Spo17288	0.70	Barchart \| Table
Spo08533	0.69	Barchart \| Table
Spo13318	0.69	Barchart \| Table
Spo21474	0.69	Barchart \| Table
Spo06789	0.69	Barchart \| Table
Spo25615	0.68	Barchart \| Table
Spo03505	0.68	Barchart \| Table
Spo03027	0.68	Barchart \| Table
Spo27291	0.67	Barchart \| Table
Spo02440	0.67	Barchart \| Table
Spo02579	0.67	Barchart \| Table
Spo02625	0.67	Barchart \| Table
Spo21071	0.67	Barchart \| Table
Spo21646	0.67	Barchart \| Table
Spo23650	0.67	Barchart \| Table
Spo27104	0.67	Barchart \| Table
Spo00391	0.67	Barchart \| Table
Spo08879	0.66	Barchart \| Table
Spo08312	0.66	Barchart \| Table
Spo19519	0.66	Barchart \| Table
Spo01612	0.66	Barchart \| Table
Spo22566	0.66	Barchart \| Table
Spo10233	0.66	Barchart \| Table
Spo13387	0.66	Barchart \| Table
Spo14983	0.66	Barchart \| Table
Spo16733	0.66	Barchart \| Table
Spo20749	0.65	Barchart \| Table
Spo04453	0.65	Barchart \| Table
Spo05076	0.65	Barchart \| Table
Spo01201	0.65	Barchart \| Table
Spo17547	0.65	Barchart \| Table
Spo22666	0.65	Barchart \| Table