Spo12091 (gene)

Overview
NameSpo12091
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 19250487 .. 19253490 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATCAGTTCATTGACAGCTGATCCACAAGGCCAGAATCTTAATACAATCACTGATGGCATGAAGGGTTTTGTTGTGAAGTATTATTTTGTTTTCTTCGAGGAAACTGGTGGATTTTGTGTTGCCTTGGCAGGTACGTTAAATCAAGCATTCAGCACATTTTACAAGCTTTTGGTTCATTTTTTGCTCATTATTGGCTTATTGGTTGTGATTCTGACTTGGTTTATTGACAACAATTTGCTGTAGGAAGTCATTCAGGCTTCGGCAGATTTTTTTTCTTTGTTCGTATCCTCCTTTGTATCCTTTAGCATTTATGCTTTTACTTGATTCTGCTTTCGAATGCTATGATTTATATATGCATGTGTTTTCTGTTTACCGTCGTCTTTTTTTCTTCTCTGCTCTTTATCTCATTTTTTTTCGCTTCTCTTGCACTTTGGCAATAAATCTTATGATAATTTGTCGGTTATGTAGAAAAAATGTGGTTGACAATAGTGTGAAGATAGAGATTATAGCTAAAACGTTGATAATTTGTCGTGACTATCATCATTCATCATAACATAGCTGAAAAAAGCTGGCTTCTGATTCCTTAGTTATGTCAAGCTAGTTGTCATTAATTTTCTCCAGTTCCGACTCTTAGTTTTGAAAAACTTCATGTTACACCTAAAACTTTTGAGAGTATAAGAGCAACTCCAATGGTTAGCTACAAGGTGGTGTAGCTAAGAGCGACTCCAATGGTCATAAAAAAGGACCAGCTTGCAAAAAGTTAAAATATATGAGTGGTAGTCAACTATTGGTACATAAATTACGTTATCATCTATGCTCTTTTGAACTGGTAGATCACGGGAAAAAATAAGTGAAAATGTAAAATAAATAAAATTGTCTATTAAATAAAATATTATGAGCTACAAGGTATTGTAGCCAATCAATTGAAATCTTTGTAGCTTAAAAGCATTGTAGCTAGAATTTGATGTGGCAAATTTAGCTACACCACCTTATAGCTAACCATTGGTGTTGCTCTAAATTTGCCACATCTAGCTACAATGTTTTTAAGCTTCAAATTTTCCTATTGGTTGACTACAATGCCTTGTAGCTCTATATAATATTTTGTTTAATTATAACTTTTTATTTATTTATCTATTCTATTTTATTCTTTAGCTACATGCTCATATGAGTTACAATATTTTGATAATTGCTTATGTAGTTTATGTACCAACAGTTATATATGCTTAAAATCTTTTACTTTTTTGCCAGCAGGTCCTTTTTATGACTATTGGAGTTGCTCTAATAGACTATCTTGTTTTCCCTTAAAGCACATGGTACCCCCTTCTATATACGTAGTACTACGTATAAGAGATTTCCTTTTTTGTTTGAGAAATTATAATCTAGTCTATCAATTTCCCTAAGCTTGTTCAATTGTGTTGCGACCTTTTTAAGGCATCTGTGGACCTGTGGTGGCATTTGAGAGTCCCAACTTTTCTGATGCTTGGATGTTTGTTTATATGTGGTAGCACCGTTTAAGAATCTTTTCGGAAACTAATCTTAGGGAAAATGTTGTTTGTCTGAAGATGCGTATATACATAGCCTTGAAAATGTTGGAATTACAATGTCAACTCTACCTGATAATCACAAGATGTGTTTATATTGTTTGGTATATATCAGTTTAGAGTTGCAAACTTACAATGCCGTCACTACTTCCAATTTCCAAACCCTTATAAATAGCAGTCAGCATGGCTGTTTTCCGCCTTTTATCCCATGTCAAACTTGTCTAGGCCTGTCAAATGGTCACTTTAGATCTAGGTTTAGTAAAATAAGGTTTTTCAATCAGGTCAATTGTCTGATGACTTTTGTGCCATGCCCTTTTCTATCTTTATTACATTCTTAGTTCATTTGAAGTTTCAGACCACAAATCTCTTGTTTAAATAATAAATACTTGTTCATGTTCTTCCATGATTTCGTGTCTGTTTGTTAGTCACTGTTCCATTTAACAACAGTTTTTATTTGTTTAAATTCCACACTGCATCATTTGTGATTATTATGGCATTAGAATAAGAGTTCGGTCATGAGTGCCATACTTGATAAAATGTCGAAACTGTGGATCTGTTTGACAATATTGTTGTACTCTGTATTTAAGTAATATTCGGATAGAGTTCATATACTTATCAGTGGACGTGCTATTCTGAATGTGGTGTTTCATTAGGGATTTTCAGTAATACCTCATTTCTTGTTACTCAATTACAAATTTTGTTATCATGCCAGTATAGATGCAAGGGTCTCATATTTTCTATTTTGTTAGAGTTGATGAAGAGGTTGGTTCTGACTTCTGACTATTTTTATTTGAGATATTCTATTTTTGCCTTTTGTTTGCTGTAGATCTCAAAATTCTAATGATGATGATAACTAAAGTTTGTTTCGCCATCAGAATCTCTTTGCTCGTTGCTGCTCATCCCAGTTGTGTCACAGGCATCTCTTCTGCCCCGGGTTGACATAGGAGAGGGTACTCTTTTCTTTCGCGAGTTTAGTTGCATCTTTAGGGATCTGAGGGCGGAGAGGCCAATATCTGATATGTATTTCAAGATACATATCACCCCACTAAACGACAAAATAGAGATAAGATAAAAATGAAAGCAGGTGCCATTTTTCAAAGACATATGTCATTTTGGAAAAATGAATGCCATTTTTCAAAAACCAATGCCATTTTCCAGAAATGGATGTCATTTAAAAAAAAAAAAATGATTTTGTTCTTTAGCGTTTGTCTTATTCCTATTTTATCGTTTATTTATGAATACATATCAGATATTGATTTATACTTCCTCCATCTGATTGCTGATTAATCTAGTGGACATTTCAAAGAAAGTATTTTTTTTTTTCTTGATATTTTGAAAAATTGATGAACAAAACGAATGTCGATCGTGTTATTTTAAGCGATAACTCGAAGCCGAGATTATTATACAGCCCGGGGAACAATGAGGATATTTCATTATTCTAATTTCTAAATGTAGCC

mRNA sequence

ATGATGATCAGTTCATTGACAGCTGATCCACAAGGCCAGAATCTTAATACAATCACTGATGGCATGAAGGGTTTTGTTGTGAAGTATTATTTTGTTTTCTTCGAGGAAACTGGTGGATTTTGTGTTGCCTTGGCAGATCTCAAAATTCTAATGATGATGATAACTAAAGTTTGTTTCGCCATCAGAATCTCTTTGCTCGTTGCTGCTCATCCCAGTTGTGTCACAGGCATCTCTTCTGCCCCGGGTTGACATAGGAGAGGGTACTCTTTTCTTTCGCGAGTTTAGTTGCATCTTTAGGGATCTGAGGGCGGAGAGGCCAATATCTGATATGTATTTCAAGATACATATCACCCCACTAAACGACAAAATAGAGATAAGATAAAAATGAAAGCAGGTGCCATTTTTCAAAGACATATGTCATTTTGGAAAAATGAATGCCATTTTTCAAAAACCAATGCCATTTTCCAGAAATGGATGTCATTTAAAAAAAAAAAAATGATTTTGTTCTTTAGCGTTTGTCTTATTCCTATTTTATCGTTTATTTATGAATACATATCAGATATTGATTTATACTTCCTCCATCTGATTGCTGATTAATCTAGTGGACATTTCAAAGAAAGTATTTTTTTTTTTCTTGATATTTTGAAAAATTGATGAACAAAACGAATGTCGATCGTGTTATTTTAAGCGATAACTCGAAGCCGAGATTATTATACAGCCCGGGGAACAATGAGGATATTTCATTATTCTAATTTCTAAATGTAGCC

Coding sequence (CDS)

ATGATGATCAGTTCATTGACAGCTGATCCACAAGGCCAGAATCTTAATACAATCACTGATGGCATGAAGGGTTTTGTTGTGAAGTATTATTTTGTTTTCTTCGAGGAAACTGGTGGATTTTGTGTTGCCTTGGCAGATCTCAAAATTCTAATGATGATGATAACTAAAGTTTGTTTCGCCATCAGAATCTCTTTGCTCGTTGCTGCTCATCCCAGTTGTGTCACAGGCATCTCTTCTGCCCCGGGTTGA

Protein sequence

MMISSLTADPQGQNLNTITDGMKGFVVKYYFVFFEETGGFCVALADLKILMMMITKVCFAIRISLLVAAHPSCVTGISSAPG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12091.1Spo12091.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo12091.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12091.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12091.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12091.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048438 floral whorl development
biological_process GO:0048507 meristem development
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0007389 pattern specification process
biological_process GO:0009886 post-embryonic animal morphogenesis
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0050793 regulation of developmental process
biological_process GO:0050896 response to stimulus
biological_process GO:0010016 shoot system morphogenesis
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
RNA-Seq Expression