Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATGCATATAACGCTACCGGACAATAGTAGGTCCCTCCCGTTACATGATAATCCCCATTCTCTAAGCAACTCATTTTCTTCACAAAGTCAGAAAAACCCATCAAAAACTAACCAGAAAATAACATATTCAATTCCAAAGTTGACTTCATTGCCAATATTCCACCAATAAAACTACCACTTCTTCTACTAGTCTATAACCTAATCACATTTTCCCACATTCCCAAGTTCCTAACCTTTCAACCCCTACAATTTTATTTTTTATTTTTTTAAAAAAAAGAAAAGCCATCTTCAATTCCTCTCTCCTCCCCAACACCCCATTTCACCTTCCCCTATCCCCTTCTTATAAAGGGCACTGTCCCTCCAACTGTAAGACTATTCCTCAATTCAAGCTTCTCTTTAAACCCTCAATTGTCTCTTTCTTCAAATATCTCTCTCCAAACACTCCCTTTTAAAAATGGATGTAAGTAAAAACATTTCTCCTTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTGTTTTTGTAATTGTCGGGTTAAACTGAATATCTGTATTTCATGGTAATAGGAATCAAGGATACGAGGGAGTCAGATACCGGCGTTTGGGAACTGGGAATACGTAAACGATCTACCCATTACTCAGTATTTTGAGTGTGCTAGACAAGCGGGTTTAATCCGCTACAGCTCTTCCTCAGGAGAATGCGATAATCATAATCATAATCATCATCACCATCATCATCATAATCAACAAAATCAAACTCCTCCTGATTTGTACACCGTTGATTTCATCAAACCTCGTACTGCTCCTCGTCCCAAACAGGTCTTCTTTACTTTCTCTCTCCTATTTTTTTTTTTTTTACTAGTGTTCATAATTTTAATACAGCATAACTCTCCTCGTTCCTTAATACTTGCAACAATTTAACTCTAGCGCTATTCATACAGTAACTAATACGGAGTAATATATAAAAATCAAATATTATTATATAATAAGTTGTTCATATTATTAATTTTAATTTACTTTTACTAATATGTAATATAATTACATGGTCAAATTATTGCAACTATTCACTATGAAGGATCGAGAGGAGCCGTAGGCTATGGTACATGGCTAAATGTAGGATAAGATAGGTTGTGGAAGTATTAGATTTTGTTGTTATTCATTTTTTTCAGAGTTAGTAAGTGTCAAAGTCTACTTTTGTTGACTCTTTTCTTTTCAATTTTGGAAATTTTATGTTTTCTATGTGGAATTTTTTTAAATGAAAGAGGCAAAATTAGAATTTCAGACTTCCAATAATAGAAATTGAATTTTTTTTTTTTTTTTTTGAAAAAGAATTTGTAGTGAAAAATGCAATATTTATTGGTACTTTCTCTTTGAGGCAGTCTATTGACGACGCAATTTAGGGAATGGATGTGCTAGATTGCTGACAAAAACCAAAAGATGTTGTCAGTTTTGTTTTTGACTTTTTTCACTTTTTCCTTTTGGGCTCTGGACTTTTACCAAAAAAAATTAACAAATACTCTTTGTAAATTTAACAAATTTAACGAGTAAATTAAAATATACAAAATAAATAGAGTAATTTCAAGATAGTCTTCTTTGTAAATTTTGATTAGGGATTGTAGTTTCCCTTCCAAATTAATTGTCACGTAGTTAACATAATTTAAGATAATATTATATGAATTAGTATTACGGAGTATAGTAAAACTTAAACTAAAGTAATAATGTGAAATTTCTTGGAAACAAGGTAATAACACGTAAAAATGATCTTGGCACACTAAAGAACGATATTTTGTTCTATACTTACGACGAAGGAAGTGCGCCAAAATTAATTTCAGACAGGGACTAGCTAACTTGTGGTGACATGAAACAAGCGAAGAAAGGTAAAAGTAATGATTTTGAGGGAAAAAGGCAGGAATTAATGGAGGATAAGACAGCATTTATGAGAAACATGTGAAAATGCATGGTGGTGAGGGCTGATTTGAGGTATGTTGCGTAAAACATATTCAAACGAGGAGCGGTAACAATCTTTTCATCTCAGATTCTCAGTAATAATAATAAATATAATAATAATAACAATATTAATAATATTAATATTAATATTAATATTAATAAACTAATTTGCTTTAGACTTCGAGTCTTCTAATTTGCTTTGTCAATTGGTTTAATTATAGAAAAAGTGCTAAGGAAGAAGATTTTATCAAAAAAAAAAAAGTGCTAAGGAAGATAAACTACCCCATTACTTTTTAGTCAATATAATCCATTAAGGAATATCTAAGTTGATAGGATTAATTGGGTGATGATAAAGGTCGCAAGTTGCGACAATATTTAGTTGTCGCAATCTTACGTGTCGCAGTTTAATTGGTACATATAGGCGACACGTAAGCTATGAGTCATAATAATATTTTTACTATCAATGCAATATTTTTACTATGAAAATATGTAAATAAGGTAGTCGATATAAATAAGGAAACAAATTAGAATATTAAGATTTTCCTAGCTTTTTTCGAAACATTTAAAGTAGGATATATAAATTATATATTTTAGTTTCCAATTTAATCATGACACATAAGCATGCCATGTCATCTTTGTGACACGGCTTAAAGGACGCATGTTGCGACCTTTATCATTTTCGGGATTAATTTAATGTCATTAATGAACTTATAATTTCTTTTTCTATGTACTCATGCGAAAATGATTCCTATAGCTAAAGCTCAAATTATCTTATACGTGTGTACTCGATGAATACAACTCCTATAGCTAAAATCTCAATTACCTTGTACGTGTGTACTCGACGAAAATAGTTCCTATAGGTAAAGTCCGAATTACCTTGTACTCAAAGGAAATAGTTACATAGCTAAATCCCAAATTACCTTGTACTCAAAGGAAATAGTTAGTCATATAACTAAAGGCCGAATTACTTTGTACTCGACGTAAATAGCTCCTATAGCTAAAGCCTGATTTACCTTGACGAAAATAAGTCTTTTTTGTTACGTCCAAATTACCTTATATTCGACAAAAATAGCTCCTAGAACTAAAGTCCGAATTATCTAGTACCCGATGAAAATTACTCCTATAGCTAATGTCCGAATTACCTTATACGCCTGCCCAGACAAAAATAGTTCCTATAGAACATCTCATTTACTAGTTTGATAAATTTATGACAGATTTTAGGGTCGGTCCATAAATTATAAGAGTACAACTACAGAGTATATAGTAATTTCATTCAATAAAAATATTCTTCCAATTAATATTGCGAAATAATTGACAAGATATTCATGTTTGCAACCACAAACATCAAACATCATTCCACCTCAACAAGCAACCCGCATTTAATTCCTTGCCTCTCTTTCCGGATTATCGGATCCCACCCATGTCCTTCTAAATGGGTTGTGGGCCTCCATCTATTTGACTGTTTAATTATACTTGTACTAGAATTAAGTTCTTGATTGAAAAATGGTACTACTATTATTAAATGGTAATTAATCAATTTAATGTCAATGTATTTACTATTAGAGACTATAATTTGGATAATTTTTACAATTTGGTGCACATATTTGTTTTTTTCGTTCGAACGTGTCTGAAAAGCTAGTTATTCAAATGGATTTCGAACTACTTGTGTAAGTTTAGGTATCACCGCCTCAAAATCCTGTTAAGTATTGATTATTACTTTTATTTATTGAACTATAGTTATGAAAACCCCTAAACACCCTTCACCCAATCTTAAACCCGCTGGAGCTTTCTACACAGGTACGGCTAAAGATGACCGTGGGCTGGGTCGGGCTTCGGGTCAAGCCCATGGGTCGTGGGCCTAACCGGGTCGGGCCTGCGCCAGACCCACGTTGTCTCGTACCGGGTTGAAAAGTTAAAAAAAGGCACAGGCCCGGCCCAAGCCCACGGGCTTTCGTGTCGTGCCGGGCCGGCCAGTCGTGCCTAAGGCTAATTTTACTAAATTTAGCGTGCTTTGCTGTGCCGGGTCGAGTCGTGCCGTGCCTTTTCGTGCTTTTTCCAAAAATTAAGCCCCAAGCCCGGACCACGGCCCACGACTTCGTGCCCGTGTCGGGCCGTGCTTTTTCCGTTCTCGTGCCGGGCCGGGTCGGGCTTTGGGTCGGGCCGACCCACAGCCATCTTTAGGTATGGCCATGAGGGTATGTCCAAGTATGATTGAGGACGTAATTGCTACCGACTTTTACCTGTCTAATTAATAATGAAAGCCAATGGTCGTGACTATTGTATGTGCAGGGGAAAGGAAGAGAAAAGAAAACAGGAGGGACACAAGTGAAGGAAGGAGGAAGGAAGCAAGCTGGGAACTGTGGAAAGGTGTTTGACGTAACGGTAACGGAGCTTCCCTCAACACAAGGAGGAGGTAAGCGTCACCCACAACCAGCTGTAAATGGCGTTAAGAAGAAGCAACAGCAGTTCCAATACGACGCCGGATCAGCCGCCCAGCCTCGTAGAGCTCCCAGAGCTGTTGATGAAGATCTCTATAAGATCCCTCCTGAGCTCCTTAGGCGGGTGCGTACTCTATTCTTTTATTTATTATTATTTTTACTCTTTTATTTCAAAAAGTACCAATTACGTACTAGTTTTTCAATTTAGTACGTACTAGTACTTGTTTACATTTAAATTTATACAATCATTCGAAATTACGTAGTACTAGAATTGATGACCCTGAATAAAATGCCTAGTTGTCCAAGTTTAACTTCTTTAACAACCACCAATAAAGTCTTGACATAATGGTTAAAATTGAGGGCTTGTGTATGATATGTATCAGGTTTGGTTTTCCATTTCCCAATTTGTATTGCTCTCATGGCTTAAATCCGCCAAAAATATATCCGGGGTGGTCCATTTTTGTCGCTAACACGTTTTTATTGGTACAAATTTATTTGTTATTGGTAGTGACTGCTAGGAACAAAGATTTTGTTAGTACCAATAAGATAAAAGTCGTATTAGTAGTGATTACTTGTGTATTTGTTAAACTAATACGGAGTAACATACAAACGTATACCAAAAACAAAATAAATTTGTATAAATAAATTTTGTTAGCATTCAAAATGGACCAACTCTGTTATTGTTTGAGACTTCCTCGACCAAGACATCATTACTTGTTCATTACTAGTGCAATTGTGCAAATACAATTTTCAACATGGGAAGATGGGAGAAATTAGTTCTAGACGAATGGAGTACACATTGGATTGGGTCTAAAAAATATCTTTTAGATAGCCATTAGTCTCATTATTACTAATTTCAACATGTTAGATTACATTGTATACGTCCTGATTTAATTGTTAGATTACCAATTTATCAATCATCTTACACTTTCAACGTGACTATTATGTTCATCCTAGACGAAGGAAATATATTGAATTTGTATCTGAACTATTGATCTAATGGATTGTACATTGACTATTTGATGCAGAAGAGGAGACTGGGATTTTTCTCAAGGTGCTTGGTTCCCCCATGCGCAGTCTAATACAAGTGATGTAAAACTGAAGAAACCAGACGAAACAAGTGTACGAAACAACTAGGGAAAAAAACAGTTAATTCGGCCGAGTGATGTAAAATATGGAAACTATATACTGGTAGCTAGCTATAGCATTTTGGTTCCGAATTCTGGTTAAGCTATAGTATGAATATTAAGACCTTAATTAGTCATTAGAAATGGGCTTTATTGTCAATATTTACAACCTTATATTGTCAATATTTTGGTAGTCTACCATTTTGAACCAAAGTCAGAGTCACAATATTTTCTAATGGTAGGCTAAAATGCAGTAAAGAAAAGTGTTAGCCATTGACTTTGGTTTGATTTTATGTCATTATACATGAGTTTTTTGGAATATTTGTTTTTACTTGGCAAAGTTTTTATGAGCTTTTTCTATAGTTTGGTTCATGGATGGAAGATAATATATGTTGACCAAATTATTATTTCCAAAATTATTTGGTTGACAAGAACATAAGAAAGTGAAATTTTTGGGATGTCTATTTCCCATGAAAAGTGTTAAAAGAAAAATTAGATATGAAAATTGCCAA CCATGCATATAACGCTACCGGACAATAGTAGGTCCCTCCCGTTACATGATAATCCCCATTCTCTAAGCAACTCATTTTCTTCACAAAGTCAGAAAAACCCATCAAAAACTAACCAGAAAATAACATATTCAATTCCAAAGTTGACTTCATTGCCAATATTCCACCAATAAAACTACCACTTCTTCTACTAGTCTATAACCTAATCACATTTTCCCACATTCCCAAGTTCCTAACCTTTCAACCCCTACAATTTTATTTTTTATTTTTTTAAAAAAAAGAAAAGCCATCTTCAATTCCTCTCTCCTCCCCAACACCCCATTTCACCTTCCCCTATCCCCTTCTTATAAAGGGCACTGTCCCTCCAACTGTAAGACTATTCCTCAATTCAAGCTTCTCTTTAAACCCTCAATTGTCTCTTTCTTCAAATATCTCTCTCCAAACACTCCCTTTTAAAAATGGATGAATCAAGGATACGAGGGAGTCAGATACCGGCGTTTGGGAACTGGGAATACGTAAACGATCTACCCATTACTCAGTATTTTGAGTGTGCTAGACAAGCGGGTTTAATCCGCTACAGCTCTTCCTCAGGAGAATGCGATAATCATAATCATAATCATCATCACCATCATCATCATAATCAACAAAATCAAACTCCTCCTGATTTGTACACCGTTGATTTCATCAAACCTCGTACTGCTCCTCGTCCCAAACAGGGGAAAGGAAGAGAAAAGAAAACAGGAGGGACACAAGTGAAGGAAGGAGGAAGGAAGCAAGCTGGGAACTGTGGAAAGGTGTTTGACGTAACGGTAACGGAGCTTCCCTCAACACAAGGAGGAGGTAAGCGTCACCCACAACCAGCTGTAAATGGCGTTAAGAAGAAGCAACAGCAGTTCCAATACGACGCCGGATCAGCCGCCCAGCCTCGTAGAGCTCCCAGAGCTGTTGATGAAGATCTCTATAAGATCCCTCCTGAGCTCCTTAGGCGGAAGAGGAGACTGGGATTTTTCTCAAGGTGCTTGGTTCCCCCATGCGCAGTCTAATACAAGTGATGTAAAACTGAAGAAACCAGACGAAACAAGTGTACGAAACAACTAGGGAAAAAAACAGTTAATTCGGCCGAGTGATGTAAAATATGGAAACTATATACTGGTAGCTAGCTATAGCATTTTGGTTCCGAATTCTGGTTAAGCTATAGTATGAATATTAAGACCTTAATTAGTCATTAGAAATGGGCTTTATTGTCAATATTTACAACCTTATATTGTCAATATTTTGGTAGTCTACCATTTTGAACCAAAGTCAGAGTCACAATATTTTCTAATGGTAGGCTAAAATGCAGTAAAGAAAAGTGTTAGCCATTGACTTTGGTTTGATTTTATGTCATTATACATGAGTTTTTTGGAATATTTGTTTTTACTTGGCAAAGTTTTTATGAGCTTTTTCTATAGTTTGGTTCATGGATGGAAGATAATATATGTTGACCAAATTATTATTTCCAAAATTATTTGGTTGACAAGAACATAAGAAAGTGAAATTTTTGGGATGTCTATTTCCCATGAAAAGTGTTAAAAGAAAAATTAGATATGAAAATTGCCAA ATGGATGAATCAAGGATACGAGGGAGTCAGATACCGGCGTTTGGGAACTGGGAATACGTAAACGATCTACCCATTACTCAGTATTTTGAGTGTGCTAGACAAGCGGGTTTAATCCGCTACAGCTCTTCCTCAGGAGAATGCGATAATCATAATCATAATCATCATCACCATCATCATCATAATCAACAAAATCAAACTCCTCCTGATTTGTACACCGTTGATTTCATCAAACCTCGTACTGCTCCTCGTCCCAAACAGGGGAAAGGAAGAGAAAAGAAAACAGGAGGGACACAAGTGAAGGAAGGAGGAAGGAAGCAAGCTGGGAACTGTGGAAAGGTGTTTGACGTAACGGTAACGGAGCTTCCCTCAACACAAGGAGGAGGTAAGCGTCACCCACAACCAGCTGTAAATGGCGTTAAGAAGAAGCAACAGCAGTTCCAATACGACGCCGGATCAGCCGCCCAGCCTCGTAGAGCTCCCAGAGCTGTTGATGAAGATCTCTATAAGATCCCTCCTGAGCTCCTTAGGCGGAAGAGGAGACTGGGATTTTTCTCAAGGTGCTTGGTTCCCCCATGCGCAGTCTAA MDESRIRGSQIPAFGNWEYVNDLPITQYFECARQAGLIRYSSSSGECDNHNHNHHHHHHHNQQNQTPPDLYTVDFIKPRTAPRPKQGKGREKKTGGTQVKEGGRKQAGNCGKVFDVTVTELPSTQGGGKRHPQPAVNGVKKKQQQFQYDAGSAAQPRRAPRAVDEDLYKIPPELLRRKRRLGFFSRCLVPPCAV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12103.1 vs. NCBI nr
Match: gi|902174142|gb|KNA08376.1| (hypothetical protein SOVF_163220 [Spinacia oleracea]) HSP 1 Score: 401.7 bits (1031), Expect = 7.000e-109 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo12103.1 vs. NCBI nr
Match: gi|731326803|ref|XP_010674204.1| (PREDICTED: uncharacterized protein LOC104890422 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 277.7 bits (709), Expect = 1.500e-71 Identity = 146/194 (75.26%), Postives = 161/194 (82.99%), Query Frame = 1
BLAST of Spo12103.1 vs. NCBI nr
Match: gi|870862669|gb|KMT13857.1| (hypothetical protein BVRB_4g077000 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 271.2 bits (692), Expect = 1.400e-69 Identity = 143/189 (75.66%), Postives = 157/189 (83.07%), Query Frame = 1
BLAST of Spo12103.1 vs. NCBI nr
Match: gi|357512431|ref|XP_003626504.1| (hypothetical protein MTR_7g116610 [Medicago truncatula]) HSP 1 Score: 134.0 bits (336), Expect = 2.700e-28 Identity = 89/192 (46.35%), Postives = 106/192 (55.21%), Query Frame = 1
BLAST of Spo12103.1 vs. NCBI nr
Match: gi|1009166620|ref|XP_015901691.1| (PREDICTED: uncharacterized protein LOC107434719 [Ziziphus jujuba]) HSP 1 Score: 132.1 bits (331), Expect = 1.000e-27 Identity = 92/205 (44.88%), Postives = 113/205 (55.12%), Query Frame = 1
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QP95_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163220 PE=4 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 4.900e-109 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJY8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077000 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.000e-69 Identity = 143/189 (75.66%), Postives = 157/189 (83.07%), Query Frame = 1
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Match: G7L2Z8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g116610 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.900e-28 Identity = 89/192 (46.35%), Postives = 106/192 (55.21%), Query Frame = 1
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Match: A0A0L9VL48_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g159500 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.000e-25 Identity = 90/205 (43.90%), Postives = 109/205 (53.17%), Query Frame = 1
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Match: A0A0B2S8W7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_001724 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 3.400e-25 Identity = 90/206 (43.69%), Postives = 108/206 (52.43%), Query Frame = 1
BLAST of Spo12103.1 vs. TAIR (Arabidopsis)
Match: AT5G18310.2 (unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 2.000e-13 Identity = 66/196 (33.67%), Postives = 92/196 (46.94%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12103.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12103.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12103.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo12103.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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