Spo12152 (gene)

Overview
NameSpo12152
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPolyadenylate-binding protein, putative
Locationchr6 : 33794699 .. 33801131 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCTTTTGTATTAGTCGTACTAATGTATTATGCCAATCTTAACCTATATTCAATCGTTGAGTCCTTCATTTTGTTCTTTGTAGTCTCAGATAGCTAACCACACAACACACAGATAGTTCAGCAGCTTCGAGACCTGTTCTCAGTTCCTCACTCCTCAACACACAAAAAATCCCCGACTGAGGAGAGAGAAAATGGAGCACCCAGAGCTTCAGTCACCAGAAAACGAAGATTACGGTGAAGAAGACGCCGCCGTCTACGAGGGCGAGTTTCCCGATGCCGACACTTCCGATGCCACCGCTATCGATGCGGATGAAGATCCTAAATCCCAGGTCTGTTTCTCTTTCTATTTCTCTCTCCTCCTAAATTTCATTCCCCCTTTAGCTCGTTTTTTCCCCTAATTCGTTATTCTGTTTTGAACACCATTGAAATAGAATCTTGAAGATATGAAAAAGAGGCTTGAAGAGCTTGAGGACGAAGCTGGCGCGCTTCGTGAAATGCAGGCGAAAGTCGAGCAAGAGATGGGTATGCCTCAAGGTGTTTATACTTGTGAATAATTTTTTTTTTTTTTGATTTATTGTTGTTCTGCTATTTTATTGTTAATTAGTTAGTTTATCTGATATTTTGATTATTTCAGAGGTTTTTCCATAAAAATTAGGGGTTTTACTGATTGTTTGCGTATTAGATTTAGCAAATTAGATTAGTTGACTGTTTGGTTGGTAGAATAATTTTTGTCTTTAACCAAGCGTAAGCTAATTCACTGGTTTCTTTTGACTCTTTTGGCATGCAATTTGTTACAGTTGATTGAGAAAAAAAGGGTTCTTTACTTATTTCACGATTTAGCACATAAGATAAGAATTTGGACTCAATATAATGTTTGGTTCAAAGGAAAACAGTTTGTATAGAGTTTGTTTTCGTTTGGAATTAGGGTTTGGACTTTATTTTCCATTGTTTGGTTCCATACTAGAAAAGTTAGAGAGAAAAGGAGAAGGTATAGGGGGGGAAAGAGAAGCTTTATTTCTTTTAAAAAGGAGATTTTTAATCCTTGGGAAATGCTTTCAATCTAAGCGTAACGAATTCTAGCGCATAAACTAAGAATTCGAAGTCTTATGTTTGGTTCAGAGGAAATCTTTTTGAACTGAATTTGTTTTTTACAGGAATTAGGGTTTGAACTTTATTTTCCATTGTTTGGTTCCTTGCTAAAAGAAAGTTGAAGAGAAAAGGAAAATTGTAGATGGAGGAAGGTGAGGAATAAGGAGGAAGAGTAGCATGCTTTCTTAAAGGGGAAATCTTTTCTATTGGGAAAACTGTTTTCTGAATTAGGATTTTCTTCTCAAGTTCTCAACCAAACACAGCCTTGAATTTCTGAAACGTTGTAACTGATGGCCGTGATAGGGAACTTTGTTAAATCTCTCCTCCCCAAAAGCTAGTAAATCACGAAGTTGATGTGATTATTGCACTGCATCGAACTATTTCTTTGATAGAAATGTATTGCCTTAACTGCACAAATAATGTATGAGATTATTATTTTCTGTGTATAAGCTGTTAGCTTTGGTAAATCTCTTGGAAATTCGCTCTTTTTTATGTACGGGGAACTGATCATACGTATACTTCCCTCTTTATCCCATGCAATATCCAATGTCCTAGCAGTAGTTGCTACGATTGATGTCTGCAACTTGGTGTGGTTGTGGTGGACGGGAAAAGGGGAAGGTAATTTTTCACGTATTGAAGCGTAACTAAGTTGGTACAGCACATATGCTCTCTGTAATATATGAATTCTCTTTAGATAGATGACGCAATGCTTGAATTTCACAAAGATATTTATTGTGTACTGAATAGTATTATTCAATATCTCTGTCGATGATGATCAATGGCCAGTTAATAGACTTAAACTTTTGTGTTACTTGAAAAGCATCTATCTATCTTTTTCTACAGTGATATTGGTGATCTTTTTATATGAAACTGGTGGATGTTTTGAATATTATTTAATAATTTTATATTTTTCTACATGAAGAATCAACCAGTGCTAATCCAACTCAAGCTGAAAAGGAGGAGGTTGATTCCCGTTCAATATATGTTGGCAATGTGAGGCAATTTCTATCTTCTTGGTATCCCTATTGTTCTTGCTATTGATCATTCTTTAAATCATAAAATGTCGCTGTGTGGAAATGTGCAAGCTTTGATTGGATTTACAATTAATGTGTGTGAATTTTGTAGTTGAGTGTTAATCTAGATTCTTTCTCTCGTTGTACAATAATGCATTAATGGGTGGATTGTGTTTAATCTCACTAAGTTAGCTAGGTAATCTGAGTTATGCAGATAATACAGAGTCGATGCTGGGATTATAACTTCACTGCTTTGCTTTCAAGCATTAGTAGAGTTCGGCTTACTCTTGTTTAAACTCCCTCCATGTGAAAACGACAATCACGTCATTATTTTGGGATGTCTGAAAATTTGTAACATATTCTAGAATAGGAATAGATTATGGTTGGATTTTTCATGCTTTCATTTTAATGGAGTGGTGGAGACAAGATGAGGAAAATGATGGCGGACTCTTTATCACAAGTCATTGGCACAATGTGACAGAAAATCCTTGCAGGGAATTTATAAATCGTCTATGGATGTGTTCCTATGATACTATGATGGTTTGATCTGTAAATGCTATTTATGACTGGGCAGCGAAGGATTTTGGTTTCCATATCCTGTACCATTCTATATTTTTAATGTTTTGTGTGGTAGGACCAAGGATCATGAGGTGGATTTAGCATGATCCATTTGCAGCTTTGGGATAGCTTTTATTACGTATAATATGTTCTGATAAGTCTTCCAAATCTTGCTTCTGTTGTCCAATCTAACCTAGTAGATGTGTCTGGTTCCAAAAAAAAACATACTTAGTAGATGTGTCTTTGTAAGTTGTAACTCACAGAATTTGTGTCTTCTTCTCCTTTCTATCTTCCTGGGGTTTCATTTTCTAAGTGGTGGAGGATAAAATCTTGTTGTAGACCTGCTGGTTTGGAGCTCTGAAGTCAAATGGTGTAACCATGAGCTCTTTAGATGGTGCCCAATCGTTAGCTGGATTTGGGGTAAATATTTGTCTAAAACTATATTTTTACAGATTCAGTCCACATTAGTTTAGGCATAAGTTGGCAGGGACTATTAATTAACATGATCTTGTCTCTTGGAAATGGTCATGGTACAGAATAGTAGATGCAGATATGGAGTTTTTAACTGCTATTTTTCTGTGGAGTGTGGATACCAAGAATATCGTGTAATTATTGCTGGAAAACATCCTGATAAAGAGATTTTTTCAGTTTGCGTTTTTGGTTTGGTGCAATTTGTTTTGTTTTGTACTCCATGTTTGAAATCTTTGAATTGGGTAGAGTGTTAGAAAATGCACAAGTTGATAGTGATGCTAATAGCCTAAGCACAAAGCACAGATATGAGGCTACTTCGTAAAACGATAGTCTCTATGCTGACTATGCATAAAAGCAGGTGGAAACAGTGCATTCTGTCGGAATTAATGCATCCGCTGTGCCTTATTGTGCCTCAACGGCGTCACTTTTTTTTTTTAATAAAAAACTTCCCTTTCTCCTATCCTGTTTAGAGTTCCCCTATAATTAGGATGAGTTCTATTCACCCGATTTTCACTTATTTTTTCCGGAAGTTATCTTAACTTGCCTGAACTTTTGTTTGAACTTATCAAAATTTATTTTAGTTATAAACTGTACTTGGTAGCCCTTACTTTTCTTGAAGTTATCTTATATAAACGTATCTGAATTCAACTAAACTTATTTTTCATGAAATAATGGAAATAAGATGAACACAAAAAGCCTTAGTTTCCTGATTAACCCTCAATCCTGTCGTCCTCCACCACCACCGTCATCTCATCACTTTGAGGTACCATTTGCACCAAACACACAACTATCACTAACGCCCAAATACCACCACCCTCCCATTGTTTGCTCATCGTCACTCACACCACACTTCCAACAATTTAATCTGCAACCTACCCACTACCACCAATTTTAAATTGGACAAAAGTAAATAATAAGAAACTTAATTTGGAAACTGAGTGCGTCGATTGAATTAGGTAACTGGAAGCTCGTAATTAATAAGGGAGTATGTAGTTCTATTTTTGTTAAATTGCTTTCTAGTTCTGGATGAATATGGGGAATTTACTTTTTCCCTTTTCCATTTGTTTTTAGGTTGACTATGCATGTACCCCGGAGGAGGTTCAGCAGCATTTTCAATCATGTGGAACCGTGAACAGAGTGACCATTTTGACAGACAGGTTTGGTCAACCTAAGGGATTTGCTTATGTAGAGTTTGTGGAAGTGGAAGCTGTTCAGCATGCTGTTCTGCTGACTGAGACTGAACTGCATGGTCGTCAGTTGAAGGTATGAACTGTTGTGTGCTTGCTTAATTTGTTTGAATTTTTAACTGTTGTGTTAATTTTATAGTGCTTTTGAAATTTTTGTCTAGGTTTCTGCCAAGAGGACAAACGTTCCTGGGATGAAGCAGTTTCGAGGAAGGCGACCAAGCCCGTATGGAAGTAGACCTAGGAGGCCGTTCATGCCCGGGGCTCCTGTTTTTTCTGCCTATGGTTACGGGTAGGCTTTCTTCTGCACCAGTTATTTAAAAATTTGGATGGATGTTTTGTAATAGAAAACTCACCTTGTTCATTTGAACTTCTTTAGTTCAATTGTAGTCTTAACCCTAATAAGCCATGAATAATCTCCCCTTTCTAATTGCACGATATTGTGTGTTTGGTTCATTAATGTTGGTGTTTTTAGTGCTTCTCATATCTTTGGCGTTTTGTTAGGACCAGATTAGCAATTTGAGAGATCTCTGAAAACAGTTATTCACATGTCTGAGTTTCTTTGTACGTAGCATTTCCCGCTGTTTGGTGTGGTATTACTAGCACTACATAGTACTATATACTTCTTATATTTTATGTAGTTCAAGTGAGCAGAGAAGTTCGAATACTATGTAATTGCATATGACTAAAACTTTAATATAGATCCTATTATCATCCATGGCAGTTCATCTTGTGATACGGAGTACTCGTAAGCTAAAATGCGAGCTTTTAGGTGCTTTAGAATTTGTTGTTGGAGCCAGAACTAATGAATAGTTGTAAGAAAGATCTAATTTCACGAATTCGAGAAATTATGTGGCTTAAGCATTTTCTCAACAATTAGGAAATTTTCTTTGGACTTATCATACTCCGTATTACCTTTGGTTCATGCTTTCGCTGCTTTGTCATTGAGTTTCCTTGAGTTATTAGATGCGAATTTCCTTGACTTATCATACTCCGTTTTACTCCCTCCGTATTTATTTAAGAGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAATTTATCAACCCCACTATATAATTAAATAATACATTTAATTTACCCACCCCACCTCCCACCTCCCACCCCAAAATGACATGGTCCCCACTTGTTTACTTATTAAAATATCTACCCAATACCACTTGTTTTATTATTTTAATTCATTCAATTCTTTTTTCTTAATACACGTGCCCGGCCAAGTGTATCTCTTAAATAAATACGTAGGGAGTAGTTATTAGAGATTGGGTATTGTAGTTTTGTTCCCCTAGCGGTTGTCTTTCTGTTTTTTCTTTTCCTTTTTACTGTTATCATTACTCGGTTTCTGTCTCTCTGTTTTGTCTGTTTCTTTTTTGTTTATTAATTGCAAGTGCTTATCTTCATAATTTCTCTTTGCTTTTGTAGAAGAACTCCTAGACTCAGGCCTCCAATGCGGTACAGACCATATTGATGGTCAGGTGGATCATTATTCGAAGTCCAAAAGGAAAAAATTTCATGATTTCCAGAATACAAATTTTACAGTAACCAAAGAAATGTTACAGAAGAAGCATTTGTAGCTAATATTATAAATGAAGTGATTGTAAAATGTCCTGTATTTTAAGTTTTGGTTGTTAGATTGTGATTCGACTGCCTTATTCTGATTTCATTTATGATGTTCGTGTATTTGATTAAAGCAAAACACATCTGCTGTGGTTTGCAGGGATCTTGAAGGTGTATAAGTACTAGCGAAAATGAGTAAACAATTACAACAGTTTTGTTGTCAACATCCTCGGATTTTTTTTTACCTAACTTATTACTTTTAGGCGGAACATATATCATTTGCTTTTGATTTAGTACTTTAATTAGCTTCTGTTGGTAAGAGCAGGATATTTAAGTCGTTTTTTTGTGTGGTGCAAATGAGCCACAAGGGCGGGGAATGAGAATCGATCCCAGGATCACCTGAAATCGGAATGAAAGCTCTAACCAACTGAGCTATCCATCACTCTCAGGATATTTAAGTCGTGAAGTTACAAGAACAACATTTTGGATTTTCAGACAATGGACAAAAAAAAGTTCAAG

mRNA sequence

TATCTTTTGTATTAGTCGTACTAATGTATTATGCCAATCTTAACCTATATTCAATCGTTGAGTCCTTCATTTTGTTCTTTGTAGTCTCAGATAGCTAACCACACAACACACAGATAGTTCAGCAGCTTCGAGACCTGTTCTCAGTTCCTCACTCCTCAACACACAAAAAATCCCCGACTGAGGAGAGAGAAAATGGAGCACCCAGAGCTTCAGTCACCAGAAAACGAAGATTACGGTGAAGAAGACGCCGCCGTCTACGAGGGCGAGTTTCCCGATGCCGACACTTCCGATGCCACCGCTATCGATGCGGATGAAGATCCTAAATCCCAGAATCTTGAAGATATGAAAAAGAGGCTTGAAGAGCTTGAGGACGAAGCTGGCGCGCTTCGTGAAATGCAGGCGAAAGTCGAGCAAGAGATGGAATCAACCAGTGCTAATCCAACTCAAGCTGAAAAGGAGGAGGTTGATTCCCGTTCAATATATGTTGGCAATGTTGACTATGCATGTACCCCGGAGGAGGTTCAGCAGCATTTTCAATCATGTGGAACCGTGAACAGAGTGACCATTTTGACAGACAGGTTTGGTCAACCTAAGGGATTTGCTTATGTAGAGTTTGTGGAAGTGGAAGCTGTTCAGCATGCTGTTCTGCTGACTGAGACTGAACTGCATGGTCGTCAGTTGAAGGTTTCTGCCAAGAGGACAAACGTTCCTGGGATGAAGCAGTTTCGAGGAAGGCGACCAAGCCCGTATGGAAGTAGACCTAGGAGGCCGTTCATGCCCGGGGCTCCTGTTTTTTCTGCCTATGGTTACGGAAGAACTCCTAGACTCAGGCCTCCAATGCGGTACAGACCATATTGATGGTCAGGTGGATCATTATTCGAAGTCCAAAAGGAAAAAATTTCATGATTTCCAGAATACAAATTTTACAGTAACCAAAGAAATGTTACAGAAGAAGCATTTGTAGCTAATATTATAAATGAAGTGATTGTAAAATGTCCTGTATTTTAAGTTTTGGTTGTTAGATTGTGATTCGACTGCCTTATTCTGATTTCATTTATGATGTTCGTGTATTTGATTAAAGCAAAACACATCTGCTGTGGTTTGCAGGGATCTTGAAGGTGTATAAGTACTAGCGAAAATGAGTAAACAATTACAACAGTTTTGTTGTCAACATCCTCGGATTTTTTTTTACCTAACTTATTACTTTTAGGCGGAACATATATCATTTGCTTTTGATTTAGTACTTTAATTAGCTTCTGTTGGTAAGAGCAGGATATTTAAGTCGTTTTTTTGTGTGGTGCAAATGAGCCACAAGGGCGGGGAATGAGAATCGATCCCAGGATCACCTGAAATCGGAATGAAAGCTCTAACCAACTGAGCTATCCATCACTCTCAGGATATTTAAGTCGTGAAGTTACAAGAACAACATTTTGGATTTTCAGACAATGGACAAAAAAAAGTTCAAG

Coding sequence (CDS)

ATGGAGCACCCAGAGCTTCAGTCACCAGAAAACGAAGATTACGGTGAAGAAGACGCCGCCGTCTACGAGGGCGAGTTTCCCGATGCCGACACTTCCGATGCCACCGCTATCGATGCGGATGAAGATCCTAAATCCCAGAATCTTGAAGATATGAAAAAGAGGCTTGAAGAGCTTGAGGACGAAGCTGGCGCGCTTCGTGAAATGCAGGCGAAAGTCGAGCAAGAGATGGAATCAACCAGTGCTAATCCAACTCAAGCTGAAAAGGAGGAGGTTGATTCCCGTTCAATATATGTTGGCAATGTTGACTATGCATGTACCCCGGAGGAGGTTCAGCAGCATTTTCAATCATGTGGAACCGTGAACAGAGTGACCATTTTGACAGACAGGTTTGGTCAACCTAAGGGATTTGCTTATGTAGAGTTTGTGGAAGTGGAAGCTGTTCAGCATGCTGTTCTGCTGACTGAGACTGAACTGCATGGTCGTCAGTTGAAGGTTTCTGCCAAGAGGACAAACGTTCCTGGGATGAAGCAGTTTCGAGGAAGGCGACCAAGCCCGTATGGAAGTAGACCTAGGAGGCCGTTCATGCCCGGGGCTCCTGTTTTTTCTGCCTATGGTTACGGAAGAACTCCTAGACTCAGGCCTCCAATGCGGTACAGACCATATTGA

Protein sequence

MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELEDEAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12152.1Spo12152.1mRNA


Homology
[Close]
BLAST of Spo12152.1 vs. NCBI nr
Match: gi|902158681|gb|KNA06244.1| (hypothetical protein SOVF_182880 isoform A [Spinacia oleracea])

HSP 1 Score: 429.1 bits (1102), Expect = 4.700e-117
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 120
           EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV
Sbjct: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 120

Query: 121 NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG 180
           NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG
Sbjct: 121 NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG 180

Query: 181 RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY
Sbjct: 181 RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 221
[Close]
BLAST of Spo12152.1 vs. NCBI nr
Match: gi|902158682|gb|KNA06245.1| (hypothetical protein SOVF_182880 isoform B [Spinacia oleracea])

HSP 1 Score: 423.3 bits (1087), Expect = 2.600e-115
Identity = 220/225 (97.78%), Postives = 220/225 (97.78%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120
           EAGALREMQAKVEQEM    ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS
Sbjct: 61  EAGALREMQAKVEQEMGMPQESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120

Query: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180
           CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK
Sbjct: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180

Query: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY
Sbjct: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 225
[Close]
BLAST of Spo12152.1 vs. NCBI nr
Match: gi|902158683|gb|KNA06246.1| (hypothetical protein SOVF_182880 isoform C [Spinacia oleracea])

HSP 1 Score: 414.5 bits (1064), Expect = 1.200e-112
Identity = 220/248 (88.71%), Postives = 220/248 (88.71%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGN-------------------- 120
           EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGN                    
Sbjct: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNTCWFGALKSNGVTMSSLDGA 120

Query: 121 -------VDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL 180
                  VDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL
Sbjct: 121 QSLAGFGVDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL 180

Query: 181 TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR 222
           TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR
Sbjct: 181 TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR 240
[Close]
BLAST of Spo12152.1 vs. NCBI nr
Match: gi|731331567|ref|XP_010676727.1| (PREDICTED: polyadenylate-binding protein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 377.5 bits (968), Expect = 1.600e-101
Identity = 195/225 (86.67%), Postives = 206/225 (91.56%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPEL SPE++DYGEED AVY+GE PDAD +     DA++D KSQNLEDMKKRLEELED
Sbjct: 1   MEHPELHSPEHDDYGEEDVAVYDGEIPDADVA---GTDAEDDSKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120
           EAGALREMQAKVEQEM    ESTSANPTQAEKEEVDSRS+YVGNVDYACTPEEVQQHFQS
Sbjct: 61  EAGALREMQAKVEQEMGIPEESTSANPTQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQS 120

Query: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180
           CGTVNRVTILTDRFGQPKGFAYVEFVE+EAVQHA+LL ETELHGRQLKVS KRTNVPGMK
Sbjct: 121 CGTVNRVTILTDRFGQPKGFAYVEFVELEAVQHALLLNETELHGRQLKVSVKRTNVPGMK 180

Query: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           QFRGRRP+PYG R RRPFMPGAPV+ AYGYGRTPRLRPPMRYRPY
Sbjct: 181 QFRGRRPNPYGGRSRRPFMPGAPVYPAYGYGRTPRLRPPMRYRPY 222
[Close]
BLAST of Spo12152.1 vs. NCBI nr
Match: gi|225454892|ref|XP_002279148.1| (PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera])

HSP 1 Score: 300.4 bits (768), Expect = 2.500e-78
Identity = 158/218 (72.48%), Postives = 180/218 (82.57%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPDADTSDATAIDAD--------EDPKSQNLEDMKKRLEELEDEAGALRE 75
           E +  VY GE PD    DA A D D         DP S+N+EDM+KRL+E+E+EAGALRE
Sbjct: 9   EHEHEVYGGEIPDEGEMDADAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGALRE 68

Query: 76  MQAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 135
           MQAKVE+EM    +S+SA+ TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV
Sbjct: 69  MQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 128

Query: 136 TILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRP 195
           TILTD+FGQPKGFAYVEFVE++AVQ+A+LL E+ELHGRQLKVSAKRTN+PGMKQ+RGRRP
Sbjct: 129 TILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRP 188

Query: 196 SPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           +P+G R RRPFMPG   +  YGYGR PR R PMRYRPY
Sbjct: 189 NPFGFRGRRPFMPGPSFYPPYGYGRVPRFRRPMRYRPY 226
[Close]
BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG45_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182880 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.300e-117
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 120
           EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV
Sbjct: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 120

Query: 121 NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG 180
           NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG
Sbjct: 121 NRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRG 180

Query: 181 RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY
Sbjct: 181 RRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 221
[Close]
BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG78_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182880 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.800e-115
Identity = 220/225 (97.78%), Postives = 220/225 (97.78%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120
           EAGALREMQAKVEQEM    ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS
Sbjct: 61  EAGALREMQAKVEQEMGMPQESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120

Query: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180
           CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK
Sbjct: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180

Query: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY
Sbjct: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 225
[Close]
BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182880 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 8.300e-113
Identity = 220/248 (88.71%), Postives = 220/248 (88.71%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDA AIDADEDPKSQNLEDMKKRLEELED
Sbjct: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDAAAIDADEDPKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGN-------------------- 120
           EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGN                    
Sbjct: 61  EAGALREMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNTCWFGALKSNGVTMSSLDGA 120

Query: 121 -------VDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL 180
                  VDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL
Sbjct: 121 QSLAGFGVDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLL 180

Query: 181 TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR 222
           TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR
Sbjct: 181 TETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLR 240
[Close]
BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CER5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102520 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.100e-101
Identity = 195/225 (86.67%), Postives = 206/225 (91.56%), Query Frame = 1 

		  

Query: 1   MEHPELQSPENEDYGEEDAAVYEGEFPDADTSDATAIDADEDPKSQNLEDMKKRLEELED 60
           MEHPEL SPE++DYGEED AVY+GE PDAD +     DA++D KSQNLEDMKKRLEELED
Sbjct: 1   MEHPELHSPEHDDYGEEDVAVYDGEIPDADVA---GTDAEDDSKSQNLEDMKKRLEELED 60

Query: 61  EAGALREMQAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQS 120
           EAGALREMQAKVEQEM    ESTSANPTQAEKEEVDSRS+YVGNVDYACTPEEVQQHFQS
Sbjct: 61  EAGALREMQAKVEQEMGIPEESTSANPTQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQS 120

Query: 121 CGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMK 180
           CGTVNRVTILTDRFGQPKGFAYVEFVE+EAVQHA+LL ETELHGRQLKVS KRTNVPGMK
Sbjct: 121 CGTVNRVTILTDRFGQPKGFAYVEFVELEAVQHALLLNETELHGRQLKVSVKRTNVPGMK 180

Query: 181 QFRGRRPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           QFRGRRP+PYG R RRPFMPGAPV+ AYGYGRTPRLRPPMRYRPY
Sbjct: 181 QFRGRRPNPYGGRSRRPFMPGAPVYPAYGYGRTPRLRPPMRYRPY 222
[Close]
BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Match: U5FZN4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s11480g PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.700e-78
Identity = 162/217 (74.65%), Postives = 182/217 (83.87%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPD-----ADTSDATAIDADE--DPKSQNLEDMKKRLEELEDEAGALREM 75
           E +  VY GE PD     AD   ++  + DE  DP S++LEDMKKRL+E+E+EAGALREM
Sbjct: 11  EHEHEVYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDLEDMKKRLKEIEEEAGALREM 70

Query: 76  QAKVEQEM----ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 135
           QAKVE+EM    +S  A+ TQAEKEEVDSRSIYVGNVDY+CTPEEVQQHFQSCGTVNRVT
Sbjct: 71  QAKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVT 130

Query: 136 ILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPS 195
           ILTD+FGQPKGFAYVEFVEV+A+Q+A+LL E+ELHGRQLKVSAKRTNVPGMKQFRGRRPS
Sbjct: 131 ILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRPS 190

Query: 196 PYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           PYG R RRPFMP AP + AYGYGR PR R PMRYRPY
Sbjct: 191 PYGLRSRRPFMP-APFYPAYGYGRVPRFRRPMRYRPY 226
[Close]
BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Match: PABN1_ARATH (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana GN=PABN1 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.600e-67
Identity = 148/230 (64.35%), Postives = 172/230 (74.78%), Query Frame = 1 

		  

Query: 4   PELQSPENEDYGEEDAAVYEGEFPDADTSD------ATAIDADEDP--KSQNLEDMKKRL 63
           P     E+E YG E     EGE    +  +      A A D + +P   S++LEDMKKR+
Sbjct: 2   PVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRI 61

Query: 64  EELEDEAGALREMQAKVEQEM---ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQ 123
           +E+E+EAGALREMQAK E++M   +  S   + AEKEEVDSRSIYVGNVDYACTPEEVQQ
Sbjct: 62  KEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQ 121

Query: 124 HFQSCGTVNRVTILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNV 183
           HFQSCGTVNRVTILTD+FGQPKGFAYVEFVEVEAVQ++++L E+ELHGRQ+KVSAKRTNV
Sbjct: 122 HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNV 181

Query: 184 PGMKQFRGR-RPSPYGSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           PGM+QFRGR RP     RP R FMPG P +  Y YGR PR R PMRYRPY
Sbjct: 182 PGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY 227
[Close]
BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Match: PABN2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PABN2 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.300e-65
Identity = 142/218 (65.14%), Postives = 166/218 (76.15%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPDADTSDAT--AIDAD------EDPKSQNLEDMKKRLEELEDEAGALRE 75
           EE+  VY GE PD    D    A++ D      +D   + L++MKKRL+E+EDEA ALRE
Sbjct: 3   EEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALRE 62

Query: 76  MQAKVEQEM---ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 135
           MQAKVE+EM   +  S    QA KEEVD+RS++VGNVDYACTPEEVQQHFQ+CGTV+RVT
Sbjct: 63  MQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVT 122

Query: 136 ILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPS 195
           ILTD+FGQPKGFAYVEFVEVEAVQ A+ L E+ELHGRQLKV  KRTNVPG+KQFRGRR +
Sbjct: 123 ILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFN 182

Query: 196 PY-GSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           PY G R RRPFM    ++S YGYG+ PR R PMRY PY
Sbjct: 183 PYMGYRFRRPFM-SPYMYSPYGYGKAPRFRRPMRYMPY 219
[Close]
BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Match: PABN3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PABN3 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.200e-61
Identity = 140/217 (64.52%), Postives = 162/217 (74.65%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPDADTSDATAID-----ADEDPKSQNLEDMKKRLEELEDEAGALREMQA 75
           EE+  VY GE P+   +D    D     ADED  ++ L +MK+RL+E+E+EA ALREMQA
Sbjct: 3   EEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTE-LAEMKRRLKEMEEEAAALREMQA 62

Query: 76  KVEQEMEST----SANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 135
           KVE+EM +T    S    Q  KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTIL
Sbjct: 63  KVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTIL 122

Query: 136 TDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPSP- 195
            D+FGQPKGFAYVEFVEVEAVQ A+ L E+ELHGRQLKVS KRTNVPGMKQ+   R +P 
Sbjct: 123 MDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPS 182

Query: 196 YGSRPRRPFMPGAPVF-SAYGYGRTPRLRPPMRYRPY 222
            G R RRPF+P  P F S YGYG+ PR R PMRY PY
Sbjct: 183 MGYRFRRPFVP--PYFYSPYGYGKAPRFRRPMRYMPY 216
[Close]
BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Match: PAB2_SCHPO (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab2 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.100e-32
Identity = 85/174 (48.85%), Postives = 113/174 (64.94%), Query Frame = 1 

		  

Query: 32  SDATAIDADEDPKSQNLEDMKKRLEELEDEAGALREMQAKVEQEMESTSANPTQAEKEEV 91
           SD  A+D  E    + L +MK+R+ E+E EA  LR MQ +++ E E+      + +KE +
Sbjct: 2   SDQDALDTQE----KELLEMKERVAEMEAEAAKLRAMQEQLDNETEAL-----RNDKESI 61

Query: 92  DSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDRF-GQPKGFAYVEFVEVEAVQHA 151
           D++S+YVGNVDY+ TPEE+Q HF SCG+VNRVTIL D+F G PKGFAY+EF E   V +A
Sbjct: 62  DAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 121

Query: 152 VLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPSPYGSRPRRPFMPGAPVFSAY 205
           +LL  + LH R LKV+ KRTNVPGM + RGR       R R  +   A  F+ Y
Sbjct: 122 LLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAPY 166
[Close]
BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Match: PAB2A_XENLA (Polyadenylate-binding protein 2-A OS=Xenopus laevis GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.600e-27
Identity = 83/183 (45.36%), Postives = 113/183 (61.75%), Query Frame = 1 

		  

Query: 25  EFPDADTSDATAIDADEDPKSQNLEDMKKRLEELEDEAGALREMQAKVEQEMEST----S 84
           E  + +  + T     EDP+   LE +K R+ E+E+EA  L+E+Q +VE++M  +    +
Sbjct: 90  ELEEEEPGELTGDQTIEDPE---LEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGN 149

Query: 85  ANP---TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDRF-GQPKGF 144
           A P   +  EK E D+RSIYVGNVDY  T EE++ HF  CG+VNRVTIL D+F G PKGF
Sbjct: 150 AGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGF 209

Query: 145 AYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQF-RG-------RRPSPYGS 192
           AY+EF + E+V+ ++ L E+   GRQ+KV  KRTN PG+    RG        R S Y S
Sbjct: 210 AYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARASSYSS 269
[Close]
BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 248.1 bits (632), Expect = 5.200e-66
Identity = 142/218 (65.14%), Postives = 166/218 (76.15%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPDADTSDAT--AIDAD------EDPKSQNLEDMKKRLEELEDEAGALRE 75
           EE+  VY GE PD    D    A++ D      +D   + L++MKKRL+E+EDEA ALRE
Sbjct: 3   EEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAALRE 62

Query: 76  MQAKVEQEM---ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVT 135
           MQAKVE+EM   +  S    QA KEEVD+RS++VGNVDYACTPEEVQQHFQ+CGTV+RVT
Sbjct: 63  MQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVT 122

Query: 136 ILTDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPS 195
           ILTD+FGQPKGFAYVEFVEVEAVQ A+ L E+ELHGRQLKV  KRTNVPG+KQFRGRR +
Sbjct: 123 ILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFN 182

Query: 196 PY-GSRPRRPFMPGAPVFSAYGYGRTPRLRPPMRYRPY 222
           PY G R RRPFM    ++S YGYG+ PR R PMRY PY
Sbjct: 183 PYMGYRFRRPFM-SPYMYSPYGYGKAPRFRRPMRYMPY 219
[Close]
BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Match: AT5G51120.2 (polyadenylate-binding protein 1)

HSP 1 Score: 241.5 bits (615), Expect = 4.900e-64
Identity = 148/268 (55.22%), Postives = 173/268 (64.55%), Query Frame = 1 

		  

Query: 4   PELQSPENEDYGEEDAAVYEGEFPDADTSD------ATAIDADEDP--KSQNLEDMKKRL 63
           P     E+E YG E     EGE    +  +      A A D + +P   S++LEDMKKR+
Sbjct: 2   PVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRI 61

Query: 64  EELEDEAGALREMQAKVEQEM--------------------------------------- 123
           +E+E+EAGALREMQAK E++M                                       
Sbjct: 62  KEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSRNLLEFEY 121

Query: 124 --ESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDRFGQPK 183
             E  ++  + AEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD+FGQPK
Sbjct: 122 EKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPK 181

Query: 184 GFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGR-RPSPYGSRPRRP 222
           GFAYVEFVEVEAVQ++++L E+ELHGRQ+KVSAKRTNVPGM+QFRGR RP     RP R 
Sbjct: 182 GFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRP----FRPMRG 241
[Close]
BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 235.3 bits (599), Expect = 3.500e-62
Identity = 140/217 (64.52%), Postives = 162/217 (74.65%), Query Frame = 1 

		  

Query: 16  EEDAAVYEGEFPDADTSDATAID-----ADEDPKSQNLEDMKKRLEELEDEAGALREMQA 75
           EE+  VY GE P+   +D    D     ADED  ++ L +MK+RL+E+E+EA ALREMQA
Sbjct: 3   EEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTE-LAEMKRRLKEMEEEAAALREMQA 62

Query: 76  KVEQEMEST----SANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 135
           KVE+EM +T    S    Q  KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTIL
Sbjct: 63  KVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTIL 122

Query: 136 TDRFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKVSAKRTNVPGMKQFRGRRPSP- 195
            D+FGQPKGFAYVEFVEVEAVQ A+ L E+ELHGRQLKVS KRTNVPGMKQ+   R +P 
Sbjct: 123 MDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPS 182

Query: 196 YGSRPRRPFMPGAPVF-SAYGYGRTPRLRPPMRYRPY 222
            G R RRPF+P  P F S YGYG+ PR R PMRY PY
Sbjct: 183 MGYRFRRPFVP--PYFYSPYGYGKAPRFRRPMRYMPY 216
[Close]
BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.400e-9
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 1 

		  

Query: 70  AKVEQEMESTSANP----TQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 129
           A V++E  +  + P    T    E+  SR+I+V NV +  T + + +HF   G V +  I
Sbjct: 452 ASVKEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFI 511

Query: 130 LTD-RFGQPKGFAYVEFVEVEAVQHAVLLTETELHGRQLKV 166
           +TD   GQP G AY+EF   EA ++A+ L  T    R LK+
Sbjct: 512 VTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKI 552
[Close]
BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Match: AT2G36660.1 (poly(A) binding protein 7)

HSP 1 Score: 51.6 bits (122), Expect = 7.200e-7
Identity = 32/101 (31.68%), Postives = 52/101 (51.49%), Query Frame = 1 

		  

Query: 67  EMQAKVEQEMESTSANPTQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 126
           + +A+ EQ +        + +K      +IYV NV+ A T EE+++HF  CGT+    ++
Sbjct: 277 QKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLM 336

Query: 127 TDRFGQPKGFAYVEFVEVEAVQHAVLLTETEL-HGRQLKVS 167
            D  G+ KGF +V F   E    AV     ++ HG+ L V+
Sbjct: 337 CDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVA 377
The following BLAST results are available for this feature:
BLAST of Spo12152.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902158681|gb|KNA06244.1|4.7e-11799.5hypothetical protein SOVF_1828... [more]
gi|902158682|gb|KNA06245.1|2.6e-11597.7hypothetical protein SOVF_1828... [more]
gi|902158683|gb|KNA06246.1|1.2e-11288.7hypothetical protein SOVF_1828... [more]
gi|731331567|ref|XP_010676727.1|1.6e-10186.6PREDICTED: polyadenylate-bindi... [more]
gi|225454892|ref|XP_002279148.1|2.5e-7872.4PREDICTED: polyadenylate-bindi... [more]
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BLAST of Spo12152.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QG45_SPIOL3.3e-11799.5Uncharacterized protein OS=Spi... [more]
A0A0K9QG78_SPIOL1.8e-11597.7Uncharacterized protein OS=Spi... [more]
A0A0K9QI38_SPIOL8.3e-11388.7Uncharacterized protein OS=Spi... [more]
A0A0J8CER5_BETVU1.1e-10186.6Uncharacterized protein OS=Bet... [more]
U5FZN4_POPTR8.7e-7874.6Uncharacterized protein OS=Pop... [more]
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BLAST of Spo12152.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PABN1_ARATH2.6e-6764.3Polyadenylate-binding protein ... [more]
PABN2_ARATH9.3e-6565.1Polyadenylate-binding protein ... [more]
PABN3_ARATH6.2e-6164.5Polyadenylate-binding protein ... [more]
PAB2_SCHPO6.1e-3248.8Polyadenylate-binding protein ... [more]
PAB2A_XENLA2.6e-2745.3Polyadenylate-binding protein ... [more]
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BLAST of Spo12152.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G65260.15.2e-6665.1RNA-binding (RRM/RBD/RNP motif... [more]
AT5G51120.24.9e-6455.2polyadenylate-binding protein ... [more]
AT5G10350.13.5e-6264.5RNA-binding (RRM/RBD/RNP motif... [more]
AT3G12640.13.4e-935.6RNA binding (RRM/RBD/RNP motif... [more]
AT2G36660.17.2e-731.6poly(A) binding protein 7[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 96..164
score: 3.8
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 95..166
score: 1.1
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 94..170
score: 16
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 75..166
score: 2.9
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 81..193
score: 3.12
NoneNo IPR availableunknownCoilCoilcoord: 41..75
scor
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 60..176
score: 2.1
NoneNo IPR availablePANTHERPTHR24012:SF436PABPN1 PROTEINcoord: 60..176
score: 2.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0009651 response to salt stress
biological_process GO:0006904 vesicle docking involved in exocytosis
biological_process GO:0009932 cell tip growth
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0051788 response to misfolded protein
biological_process GO:0032259 methylation
biological_process GO:0006508 proteolysis
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0006412 translation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0080167 response to karrikin
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005768 endosome
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0000145 exocyst
cellular_component GO:0005576 extracellular region
cellular_component GO:0005840 ribosome
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
molecular_function GO:0030797 24-methylenesterol C-methyltransferase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0000035 acyl binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0017069 snRNA binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003838 sterol 24-C-methyltransferase activity
RNA-Seq Expression