Spo12153 (gene)

Overview
NameSpo12153
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPlastid 16-kDa outer membrane protein
Locationchr6 : 33693944 .. 33697233 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGACCATTTCTAGGAAGAGCCGTTCAAATCTCATCACAAATCTCAAAATTTCATCAATCATCCTTCTATAATTACATACCGTTTCCCAAGCTTCATTTCCCGCACTACACTCACCCTCACAATCTCACTCTCACATTCTCACCCACACACAATCTTGAGAGAGAAAAACTGTTAGAGAGAGAAAGATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTAAATATCTTTATCCCTGTCCTTAATTTCGTCTTCATTTTGTTATATTTCAATTACCCTTTGGTTGAATTTCGAAAATCTGTTTAGTTTTTATTTCTGGGTTTTTGATTTTTATTGTCATATTTTCAGGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGTTCTTACTCTTACTTTTGAATTTCTGTGTTTTTGTGTGGCGATTGTGGTGATTTTGACAGTCTGTGATTTAGGGGTTCGAATTATGTTGTCGCATTACTCGTTTAAATTACACTATCAACGTGACTATCAATTCGAGACGGGATCCTCACCCCTTTGTACTAATGCAATTATTTGATTCTTGGTAATGTTTAATTGACAAATGTGCTAAATGTTAATTTTGATAAGAGAGGTTGTCAATTGCCACTCATTTTGTGCTTCATTTTCGCTTTTGTTGCGTTGTATTCTTGAATTGTTTTTGATGATGAAATGTTGAGAAATATGTACCATTCTAGTACGGATTTAGTTGTCACGTTACTGGTTTTAATTACATTGTCAATGTGACTATGAATTAGGCACCCTATGGTGTAATTTGTTTTGTACCCACTTACCACAACTGGTATTTATAAAAGCAATAATCTGCAATTATAGGATGATTATGGGATTCTTTGTTTTGTAAACACTTGGTAATCTGCTAATTAACCACATTTTTTTTCGTCTTGGCAGGAAGTATTTCAACTAAGGATGCTGAGCACACTGTAAGCTTATTGTTTTGTTTTTGTTGCTTGAATTATGGAGCACACTGTAATGCCTTAAAAAACCGTGTATGGTTTTCGTAAATTAAACCAAAAAGAAAAGAGATAACGAATTTGGAGAGATATCTATGGCTATTACAGAGTGCATTTTGTTTTATCTTGTCTTGGAAAATGCAGGCCCAACTAGGCTACGATAATGTTAATAACCTACTTGTAATATCCTAAAAATTTATCCTGAAATTTAACAAACATGTTTATATGTAATATGTTTGCAGCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGTAAGTGCTAACTTTTCTTCTACAGTACAAACTACAAACATTATAGAAGTGTTAATTGTTTCCAAACTTGACCGCTGTTACTTTTATACTCTGCAGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGGTAAGTTCTTCCTCGAATCAATCAATAAGTAATCTTTATCAATTTATCATTGCAATTTACTGTTTTGATTGAGAAAGTGATACATAATGCTGAGTTGAACGCAGTAAATAAAAATTGATCCGTGTTTTCAGAATAAGGTGCATTACATTGTGTCCATTGTATGAAGTACACGTACTTAGACTTTTTCCACTGATCTTAAAACAGACTTAACATATCTTAAAGGCACTGATAGTGCACTATATTCAGGATAGTTAATAAACAATGAATCCTCTTGTTTTTCCCTTCCCTGCTCATACTGGGTATCTTTTGCTTATACTCTGTACTGAGTTTATAAATTATAAGCAATGTCAATTTGCACCATTATTGAAGTTATGTAATTAATTCAAGTTATTCGGATTCTTCATTTTACAAGTGTTCGATCATTGACACTCGGTCATAGTTATGGACACTTTTGATACTTAATTTTTTGTCCAAAATCATGGAAAATTTTCACAAAATAGCCAATTCGAACATTATATTATTAGTTTGACACAAAATCCTCCCCACTCTTTTTATTATTTATTATTTTTCTTTTACAGAGAGGTTAGTATGTTGTCTTGAAGTTACTACCCACCATGTCCCCTTTGCAATTCTTTTCTTTATTGGTTTTGTGGTTACATATGCTTGTGAAAGAATTACCACAAACTGATTCTAGTATTTTGAGTTTCTTCTATTTTGGGGTTTAAGGAGGAGGGAGAGTACAATACTTCCTGAAAACCACTTATTATTGGCATCCTAAATAGTGTATAATACTTCCTAAACTTCGACAGGTTTACATTCTCCTTTTGACAAAAGTTTACAAGCCATAATAAGTAGTTTACTAATTTGTTAGGGATGTATTTTCTTGAATTTGGAAGGTAAGATAATCAGCTTTCTTTTTATTGTTTATGATTTGACACGGATTAAGACTATGTATGTATAGCTTAATAACGGATCTTTCTTTGTTTCATTTCATATTGATGACTATCTTGCTTTTCTATTTGGATGGAAACCCGTGGTGCTATTGAATTTCTTAACGAGTATCATTTTTGTTTTTGATAACCAGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAATTACTAATTAGGCCTTAATTAAGCCATCCATATCCATATCCATATCCATATCTGCTGTGTAGATAAGGATTAAGGAAGAGAACATCTTGTCTCTGTTCTTCCGTAGTTTTGAGGTTGCCTGAATAATCAAACATTTAGAACTAGCGTACAGACGGAATTCATCAATAAAACTACCTTGTGTTTTTATTGGTAATATTTATGAATGAGCAACTAGTACTTTATTTGATGTTTTTGGTTTGGCTGCGAAAGGGCCGAGTACCAGATTCTGGGATCTGTCTAATTGATCATCAAACAAATTTCACCAGGTCTCATTTTCTCTGTTTCCCCCAACAGTATCATCTTTGGCATAACCTATCCCCCATTCTCCCATGAAAAATAAACTGAATTCATACTACATTCACCAACCAATCCAGTCCTGATTCTGGAATGCAGTTTTTCTTTAAATAACTTCAGAATTGAAATTCTGAGTGCAAAGAAAATGATTCCGGTTAAATATATGTTAAAAAAAAAAAAAAATACAGGTAGCAAGATGGAAATGCAAAGGTTTAGTAG

mRNA sequence

TTGACCATTTCTAGGAAGAGCCGTTCAAATCTCATCACAAATCTCAAAATTTCATCAATCATCCTTCTATAATTACATACCGTTTCCCAAGCTTCATTTCCCGCACTACACTCACCCTCACAATCTCACTCTCACATTCTCACCCACACACAATCTTGAGAGAGAAAAACTGTTAGAGAGAGAAAGATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGAAGTATTTCAACTAAGGATGCTGAGCACACTCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAATTACTAATTAGGCCTTAATTAAGCCATCCATATCCATATCCATATCCATATCTGCTGTGTAGATAAGGATTAAGGAAGAGAACATCTTGTCTCTGTTCTTCCGTAGTTTTGAGGTTGCCTGAATAATCAAACATTTAGAACTAGCGTACAGACGGAATTCATCAATAAAACTACCTTGTGTTTTTATTGGTAATATTTATGAATGAGCAACTAGTACTTTATTTGATGTTTTTGGTTTGGCTGCGAAAGGGCCGAGTACCAGATTCTGGGATCTGTCTAATTGATCATCAAACAAATTTCACCAGGTCTCATTTTCTCTGTTTCCCCCAACAGTATCATCTTTGGCATAACCTATCCCCCATTCTCCCATGAAAAATAAACTGAATTCATACTACATTCACCAACCAATCCAGTCCTGATTCTGGAATGCAGTTTTTCTTTAAATAACTTCAGAATTGAAATTCTGAGTGCAAAGAAAATGATTCCGGTTAAATATATGTTAAAAAAAAAAAAAAATACAGGTAGCAAGATGGAAATGCAAAGGTTTAGTAG

Coding sequence (CDS)

ATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGAAGTATTTCAACTAAGGATGCTGAGCACACTCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAA

Protein sequence

MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIVLDALTGGAVATAAEFINYLTY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12153.1Spo12153.1mRNA


Homology
[Close]
BLAST of Spo12153.1 vs. NCBI nr
Match: gi|902223209|gb|KNA19390.1| (hypothetical protein SOVF_062040 [Spinacia oleracea])

HSP 1 Score: 278.1 bits (710), Expect = 8.500e-72
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

		  

Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT
Sbjct: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV
Sbjct: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           LDALTGGAVATAAEFINYLTY
Sbjct: 121 LDALTGGAVATAAEFINYLTY 141
[Close]
BLAST of Spo12153.1 vs. NCBI nr
Match: gi|731331559|ref|XP_010676722.1| (PREDICTED: outer envelope pore protein 16, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1 

		  

Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPR+  AKV+VVVDTGNPLLDRTVDGF KIG VAATRA AED YH+AK+GS+STK+ E +
Sbjct: 1   MPRTGIAKVNVVVDTGNPLLDRTVDGFFKIGTVAATRAAAEDVYHIAKKGSLSTKNVEES 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGT+AGVYTG+EYG+ R RGT+DWKNAMI GALTGAL S VT G  DKIV
Sbjct: 61  LKKMCKEGAYWGTIAGVYTGLEYGVARVRGTNDWKNAMIGGALTGALVSVVTKGSNDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           +D LTG AVATAAEFI+Y+ Y
Sbjct: 121 MDTLTGAAVATAAEFISYVRY 141
[Close]
BLAST of Spo12153.1 vs. NCBI nr
Match: gi|645216982|ref|XP_008223554.1| (PREDICTED: outer envelope pore protein 16, chloroplastic [Prunus mume])

HSP 1 Score: 221.1 bits (562), Expect = 1.200e-54
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      KVDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY V K+GSIST
Sbjct: 1   MPRSSFSGMISGPKVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSVVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAMI GA+TGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMIGGAVTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146
[Close]
BLAST of Spo12153.1 vs. NCBI nr
Match: gi|694325453|ref|XP_009353670.1| (PREDICTED: outer envelope pore protein 16, chloroplastic-like isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 220.3 bits (560), Expect = 2.100e-54
Identity = 109/146 (74.66%), Postives = 123/146 (84.25%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDVV+D GNPLL+ TVDGFLKIG VAATRAVAEDA+  AK+G+IST
Sbjct: 1   MPRSSFSGALTGPQVDVVIDLGNPLLNHTVDGFLKIGTVAATRAVAEDAFSAAKKGAIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
           KD EHTLKKMCKEGAYWGTVAGVY G EYGI R RG  DWKNAM+ GALTGAL SA + G
Sbjct: 61  KDFEHTLKKMCKEGAYWGTVAGVYVGAEYGIERVRGRRDWKNAMLGGALTGALVSAASKG 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATAAEFINYLT
Sbjct: 121 NKDKVLVDAITGGAIATAAEFINYLT 146
[Close]
BLAST of Spo12153.1 vs. NCBI nr
Match: gi|595830594|ref|XP_007206105.1| (hypothetical protein PRUPE_ppa012989mg [Prunus persica])

HSP 1 Score: 218.8 bits (556), Expect = 6.100e-54
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY + K+GSIST
Sbjct: 1   MPRSSFSGMISGPRVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSMVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAM+ GALTGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMMGGALTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146
[Close]
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIT3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062040 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 5.900e-72
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

		  

Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT
Sbjct: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV
Sbjct: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           LDALTGGAVATAAEFINYLTY
Sbjct: 121 LDALTGGAVATAAEFINYLTY 141
[Close]
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F8R6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102480 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.200e-56
Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1 

		  

Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPR+  AKV+VVVDTGNPLLDRTVDGF KIG VAATRA AED YH+AK+GS+STK+ E +
Sbjct: 1   MPRTGIAKVNVVVDTGNPLLDRTVDGFFKIGTVAATRAAAEDVYHIAKKGSLSTKNVEES 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGT+AGVYTG+EYG+ R RGT+DWKNAMI GALTGAL S VT G  DKIV
Sbjct: 61  LKKMCKEGAYWGTIAGVYTGLEYGVARVRGTNDWKNAMIGGALTGALVSVVTKGSNDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           +D LTG AVATAAEFI+Y+ Y
Sbjct: 121 MDTLTGAAVATAAEFISYVRY 141
[Close]
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: M5W0Q9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012989mg PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.300e-54
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY + K+GSIST
Sbjct: 1   MPRSSFSGMISGPRVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSMVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAM+ GALTGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMMGGALTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146
[Close]
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A067KEE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11047 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.400e-49
Identity = 102/146 (69.86%), Postives = 117/146 (80.14%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP   FA      +VDV +D GNP L+ TVDGFLKIG VAATRA+AEDAY+V KRG+IS 
Sbjct: 1   MPSKRFAGSLSTPRVDVAIDMGNPFLNLTVDGFLKIGTVAATRALAEDAYYVVKRGNISR 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
           ++ E TLKKMCKEGAYWGTVAGVY GMEYG+ R RGT DWKNAM+ GALTGAL SA ++ 
Sbjct: 61  RNLEQTLKKMCKEGAYWGTVAGVYVGMEYGMERIRGTRDWKNAMLGGALTGALISAASNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDKIV DA+TGGA+ATAA F+NYLT
Sbjct: 121 GKDKIVTDAITGGAIATAATFLNYLT 146
[Close]
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: C6SW13_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G038200 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.100e-49
Identity = 94/137 (68.61%), Postives = 114/137 (83.21%), Query Frame = 1 

		  

Query: 4   SSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKK 63
           S   ++DV +D GNP L+ TVDGFLKIGAVAATR+ AED YH+ ++G+IS++D E TLKK
Sbjct: 7   SESPRLDVAIDMGNPFLNLTVDGFLKIGAVAATRSAAEDTYHIIQKGNISSRDFEKTLKK 66

Query: 64  MCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIVLDA 123
           MCKEG YWGT+AGVY GMEYG+ R RGT DWKNAMI GA+TGAL SA ++ +KDKI +DA
Sbjct: 67  MCKEGVYWGTIAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNNKKDKIAIDA 126

Query: 124 LTGGAVATAAEFINYLT 141
           +TG A+ATAAEFINYLT
Sbjct: 127 ITGAAIATAAEFINYLT 143
[Close]
BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OEP16_PEA (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum GN=OEP16 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-52
Identity = 100/146 (68.49%), Postives = 120/146 (82.19%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      K+DVV+D GNP L+ TVDGFLKIGAVAATR+VAED +H+ ++GSIS+
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            D E +LKKMCKEGAYWG +AGVY GMEYG+ R RGT DWKNAM  GA+TGAL SA ++ 
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
           +KDKI +DA+TG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146
[Close]
BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OP161_ARATH (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.700e-40
Identity = 82/143 (57.34%), Postives = 101/143 (70.63%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP S+F+      K+ V VD GNP L+ TVD FLKIGAV  T+++AED Y    +GS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
              EH LKK+CKEG YWG   GVY G EYGI R RG+ DWKNAM+AGA TGA+ SAV   
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 EKDKIVLDALTGGAVATAAEFIN 138
            KD IV+DA+ GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143
[Close]
BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OP162_ARATH (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana GN=OEP162 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-16
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 1 

		  

Query: 5   SFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGS------------- 64
           SF K  +  D G+PLL+R  D F+K   V A +AV+ +AY     G+             
Sbjct: 15  SFEKAHLF-DLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEI 74

Query: 65  -------------ISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRAR-GTSDWKNA 124
                         S+K  +  +K   KE   WG  AG+Y+G+ YG+   R G  DW+N+
Sbjct: 75  TGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNS 134

Query: 125 MIAGALTGALTSAVTS--GEKDKIVLDALTGGAVATAAEFIN 138
            +AGALTGA  +  TS     +++V  ALTG A++TAA  ++
Sbjct: 135 AVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175
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BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT2G28900.1 (outer plastid envelope protein 16-1)

HSP 1 Score: 166.8 bits (421), Expect = 9.800e-42
Identity = 82/143 (57.34%), Postives = 101/143 (70.63%), Query Frame = 1 

		  

Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP S+F+      K+ V VD GNP L+ TVD FLKIGAV  T+++AED Y    +GS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
              EH LKK+CKEG YWG   GVY G EYGI R RG+ DWKNAM+AGA TGA+ SAV   
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 EKDKIVLDALTGGAVATAAEFIN 138
            KD IV+DA+ GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143
[Close]
BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 85.1 bits (209), Expect = 3.700e-17
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 1 

		  

Query: 5   SFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGS------------- 64
           SF K  +  D G+PLL+R  D F+K   V A +AV+ +AY     G+             
Sbjct: 15  SFEKAHLF-DLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEI 74

Query: 65  -------------ISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRAR-GTSDWKNA 124
                         S+K  +  +K   KE   WG  AG+Y+G+ YG+   R G  DW+N+
Sbjct: 75  TGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNS 134

Query: 125 MIAGALTGALTSAVTS--GEKDKIVLDALTGGAVATAAEFIN 138
            +AGALTGA  +  TS     +++V  ALTG A++TAA  ++
Sbjct: 135 AVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175
[Close]
BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 48.5 bits (114), Expect = 3.900e-6
Identity = 27/95 (28.42%), Postives = 42/95 (44.21%), Query Frame = 1 

		  

Query: 18  PLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKKMCKEGAYWGTVAGV 77
           P    TV+  L++        +        K G      A    K + + G   G V+GV
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGV 69

Query: 78  YTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVT 113
           +T    G++R RG +DW NA++ GA+ GA  +  T
Sbjct: 70  FTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST 104
The following BLAST results are available for this feature:
BLAST of Spo12153.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902223209|gb|KNA19390.1|8.5e-72100.hypothetical protein SOVF_0620... [more]
gi|731331559|ref|XP_010676722.1|1.7e-5676.6PREDICTED: outer envelope pore... [more]
gi|645216982|ref|XP_008223554.1|1.2e-5474.6PREDICTED: outer envelope pore... [more]
gi|694325453|ref|XP_009353670.1|2.1e-5474.6PREDICTED: outer envelope pore... [more]
gi|595830594|ref|XP_007206105.1|6.1e-5473.2hypothetical protein PRUPE_ppa... [more]
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BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RIT3_SPIOL5.9e-72100.Uncharacterized protein OS=Spi... [more]
A0A0J8F8R6_BETVU1.2e-5676.6Uncharacterized protein OS=Bet... [more]
M5W0Q9_PRUPE4.3e-5473.2Uncharacterized protein OS=Pru... [more]
A0A067KEE6_JATCU1.4e-4969.8Uncharacterized protein OS=Jat... [more]
C6SW13_SOYBN4.1e-4968.6Uncharacterized protein OS=Gly... [more]
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BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP16_PEA1.2e-5268.4Outer envelope pore protein 16... [more]
OP161_ARATH1.7e-4057.3Outer envelope pore protein 16... [more]
OP162_ARATH6.6e-1633.9Outer envelope pore protein 16... [more]
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BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G28900.19.8e-4257.3outer plastid envelope protein... [more]
AT4G16160.23.7e-1733.9Mitochondrial import inner mem... [more]
AT3G62880.13.9e-628.4Mitochondrial import inner mem... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 56..129
score: 2.7
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 8..139
score: 7.9
NoneNo IPR availablePANTHERPTHR15371:SF2OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTICcoord: 8..139
score: 7.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006606 protein import into nucleus
biological_process GO:0051604 protein maturation
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0001510 RNA methylation
biological_process GO:0009416 response to light stimulus
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0000373 Group II intron splicing
biological_process GO:0009409 response to cold
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006094 gluconeogenesis
biological_process GO:0042753 positive regulation of circadian rhythm
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0009909 regulation of flower development
biological_process GO:0010114 response to red light
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006342 chromatin silencing
biological_process GO:0006526 arginine biosynthetic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0048046 apoplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0034426 etioplast membrane
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0046930 pore complex
cellular_component GO:0005773 vacuole
cellular_component GO:0005618 cell wall
cellular_component GO:0005634 nucleus
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0005730 nucleolus
molecular_function GO:0003723 RNA binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0015288 porin activity
molecular_function GO:0008483 transaminase activity
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004619 phosphoglycerate mutase activity
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression