Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCACCAGAAGTCGAGCGAATTAGCTAGAACACAGAAAAAGCTCAATTCGGAGAAGAGAGAGAAAGCTTCTCATACTTCATCAATGGCGATTTCTTTTCTTCCTCCCACTTCCATCCAGGGAAAGCTCAACCACCACAGTCACCAACGCCCCTATTTTCTCTCGTCACCGCCGCCGCCTCACCGGCTTCCTATGCGCGTGGTGGCGTTCCAGCGAGGAGACTTCGAGTCCTTGAAGCGGCGCGTATTATCAGGTGAAGCTTTGAAGGAAGTATGGCACTCCGCCAACGACGGATTCGAACAGCTTGTCTTCGACGCTAGGAAGGCTGCTGAGCGGTTTGACCGCCGTTACTCCATCTCCCGTCGCCTTTCTTCCGCCGCTGAAGCTGCCTCCGTTCGCGTTCGTGAAATGGACCGTGACTATGAGGTTACTCAGAAATGGCGAACTTTCTCTCTCGACTTCTCCCGCAATTTGCCTAGGGTTCGTCTTTCCCGCTCTCTCTAGTGCAGAATTTTGTTATTTTTGCAATTTGATTATATTTCAGGAGTTTGTTGTATGTTATTGTTAAGAAATTGAGCTGATTTTAGGAGTAGTGTCTGAACATCGGACATGAAATTAAGAGATTATGGTGATGTGATAATTTCGATTTGTCAAATTGGGGACGTTTCCTTCATTGCATTTGAGCTAGTTGCAGACTGAATTAGGGTTTAAGAATCATGATAACGGGACCAAACTCGAACACGATCCATTTATCTGAAATGATAGCTCTATTATTGATAATCATGGGAACATGTGGATATTGTTTGGCTTTTAAAATTGCCAAGTTGTGCTGTTTGGAAAACATACCATTACCTCAATACAAGTATAGATGAAAACTTAGTTAGAAGTATGTGGTGATGTAGGTTTATCATGTCCTGTAATTCTATTTCACTCGTTTTGTTTTAGTGGTGGAAGTTGACAGCATGATTAACGTTGTTCATTTTCTTGTTCTTGCAGTATAGGAAGCAGTTCAATAGTTTCATGGATACTCCCCTTGGAAGGAGTTCTGCAGTAAGTATTATTTGAATTTATGCACTGCTTTGCATCCGTTCTACTATACGAAGGTTATATTTTCAACATGCATGCCTTGAATTTTTCACATTGAAACTTGAGCTTATCAGCAATTTAGCAAGCTACCACTATTCTTTAAAATTCATGGTCATTTTTTCTGGAGTTGTTGATAACAAGGAGCAAAATTGACTACCTCAGTAGCCCCTTATCATTTACGCTTGGGATTGGATTAGCATAGTCAAATATGGGAGAAATGAATGTGTGGCAAAATGACATTTTTGTCTTTCAATATACCTCTTTTTCTGGCCTGTCATTTTGATTGTGAATGGAGGTTTTTTACTAAGCATACCAGATGACTGTAATCTGTAGAGAAGAACCCCTTTATCCCCTAAAATGACATCCCTTGCTTTCTGAAAGGAGACTCCTTTAACTGAAATTATATCTTCATTTTGTTGAACTGCCCATACCCTTACTGTATCTTTACAAGGAGTTATAACACAGCTTTCAAAGCTGAAGGGAGTTGTATTATTGGTAAAACACATTCAAAGAGATAAGTCAATATTTCCCCTTAAACTTCACACAAATCCGTTTTGGGTATTCTCTCGGGAGAGGAAAGTAATTCATTCGACCCAGTGGCTCTTCTACCATAAATTCCATTCAGGTGCCATCTTTTCTCATCATTTTAAGCAAGTGGTGCCATCTTTTCTCATCAAATCATGTTGTCGTTGGCAAGAATCCGTTAGTTTCATTGTATCATCTCTGTCGGAGAATGCTTCTAATGTATGTATTGTTCTGTTCTATGGCAGTCTAAATTTTGACTTCAATATTCCTCTTGCCTTTCTCTTCACATCTCCTATATCTGTATGTATTACCGTCTTCCTTTCATCTTCTTTTCTTTGGGGTTGGCTCATTGGTTACATACTTACACACCTTGAAAAAGACTGAATGTGTAAAATCTTTAGTTCTATTCACTTTTGAACTCTTTAAATAGATCTACATGTTAAATTCTTTATGTGCATAATGAGGTAGTCCTGTTGTTGAGTCAATGCTATAGTTTTTGGTTTCTTACTTTATATGCTCATCTCCATTTCAGACAATCTTCTTCTTATGGTTTGCTTTGTCCGGATGGCTGTTTCGGTGTTTAATTATTGCCACTTGGGTATTGCCAATTGCTGGTCCTCTTCTGCTCACCGCTGTTGCTAATAAAATGACCGTAAAGGTAAATGCATCTGCTTGCATTAGTTAATTTTCATATATTTTGTGTTCAATTTTTTTTTTTGACTGCTTTCTGCTTACTATGGTAAGTTGGTTAAGCTGTATTTTGCTTCTTGAACATCGTCTGTGGGTAAAGAGACACCTTGTCCTGATAATGGTCTAGCACTAGCCTTTTGAATTTAATCCCCTGTATAAATTGCTGGTTAGTTCTGTCCATCTTTTGGGAAGGCGGAAGTCCATTAGTATGTCTGCAAAGTCATATGTATTGGTTATAATCCAATGTCTGTCCTCACTTGTTTGCTAGCAAGCCTTGTTTTAGGGTCTGAGTTCTTTCCAATTTTGTTTAGTTTGAAGTTAGTGGTGAATGGTGAAAGGAAAGGGCACATTGAACTTTTTAAGACCAAGGTAGTTGATAAATGTTTTCCCAATGGTCCTTTTGTCACCTCCCTCTCCAGCTGCAAACTTGATATGTAAAAGAAGAAGAGATATGTCTACCCAGAATTTAATAACGAGTTGTACTAACGGAGTACTTGATAATGTACTGTTTGTGGCTTACTCCGTATTATCTTGTCCTTTAAAGGGTATGTATTAGGGAGACAACGAGATACCTTAATCTCAAAGTTTTTTTTTTGTTTTTATGAAAAACCCAAAGATATAATAACAGAATAAAGAAGACCAAAATCAACTGGTTACTACTCTATTGTCCCTTCTTGTTCCTTTATCAGTCATCATTTACTGAGGTATGTGAAGTCTGAGTTATTGGGTGATCTCAGTGGGAAGAGACATATCAGGAGTTATCGTGTGCTTGGAGGGTTTTTGTGGTTACCCCTTTGGATAATGTACATGGTCTCTGATGACTTGGCAAGGCCTGAATGTCTTTGGAGATGAATGATATGAGAAGGTATATGTAGTACGATAGGATGATACTATGTTTATATGTATAAGGCATAATTGATCACGGTTATAGCTCCAAGAACATGCTGTAACAATATGATAATCTCGGAGACTGTCGAACATTACTAGAATAGTTCTCTGTTCTCCTAGATGGGGTGGTTTTGACGTAATTTTTGGGTTGATGGTAGATCCAGGGTAGATGTGTTGGTAATCTTTTCTAATGCTGTACGCCCGTACTGTCAAATACTTAGCTTGAAAGTGGGCAACATTTCTTCAGCTGCCTCGTTATACATTAGAACAGAAATAGACGGCTGCTACAACATGCTGGAAGAGGCTCCTGTAGTCCACATGGTTGCAAGAGTTATGCTTTAGTGGGATAGCCATGTCCCACATTCCTACTATAGTTAGCACTTAGCAGTTAGCAATATGCTTCGTGCATTAGATGTTCTCATGCACCTTTTGCAAAATCTTTCACAGGGTGCTTGCCCGGCATGCAAGAGGGAGTTTATAGGCGTGAAGAACAGTGTAATACGTTGTCAAGGTTGTCGTAACATTGTCTGGCAGCCACAAGGCACACAAGATGATTTCTTCTCAAGAGGTGACAAAAGAACACAGTCAAAGAATTCTGATATCATAGACGTTGAATTTGAGGAGAAGTGATGAAAACCGATATATAACTCAATTTGGAGATGATGTTAACCTGTTCCATTCGGGACCAACAAGCTGGAAAAATAGGAATGCAATCATAAGCTGGAGAAAGAGAAAAGTGTGTTCCTGTTTAGGATGCCTACACAGTCACACACTCGGATTCTAGGAATTGATTTTGGTTAAGATGTTGCTGCTATATTCTATATGTTGGAATCTGAAATAGTCACATCTGAAATAGTCACATTGAGAAGCATAATGCTGCTTATCTTCTTTTTTGGGATCTTTGTTTCTACATTTAGAAAGCTGATAGGCTGGTATGTAATAATTTGTTCTGTTGGTGCATTCACTTCGCCATTGTACAGTAAAAGATCTCATCATACTTCGTGTGTAGATAATTTGGTTGAAGTTCGAGTGTTAAGTGTTAACTTATCCAATGTACTTGTGTTACCTGCTTTTAGGTAGCTTTTCTTTGCACCATGTCTCAATAAAAAGGGGATTATACACCTCAT GCACCAGAAGTCGAGCGAATTAGCTAGAACACAGAAAAAGCTCAATTCGGAGAAGAGAGAGAAAGCTTCTCATACTTCATCAATGGCGATTTCTTTTCTTCCTCCCACTTCCATCCAGGGAAAGCTCAACCACCACAGTCACCAACGCCCCTATTTTCTCTCGTCACCGCCGCCGCCTCACCGGCTTCCTATGCGCGTGGTGGCGTTCCAGCGAGGAGACTTCGAGTCCTTGAAGCGGCGCGTATTATCAGGTGAAGCTTTGAAGGAAGTATGGCACTCCGCCAACGACGGATTCGAACAGCTTGTCTTCGACGCTAGGAAGGCTGCTGAGCGGTTTGACCGCCGTTACTCCATCTCCCGTCGCCTTTCTTCCGCCGCTGAAGCTGCCTCCGTTCGCGTTCGTGAAATGGACCGTGACTATGAGGTTACTCAGAAATGGCGAACTTTCTCTCTCGACTTCTCCCGCAATTTGCCTAGGTATAGGAAGCAGTTCAATAGTTTCATGGATACTCCCCTTGGAAGGAGTTCTGCAACAATCTTCTTCTTATGGTTTGCTTTGTCCGGATGGCTGTTTCGGTGTTTAATTATTGCCACTTGGGTATTGCCAATTGCTGGTCCTCTTCTGCTCACCGCTGTTGCTAATAAAATGACCGTAAAGGGTGCTTGCCCGGCATGCAAGAGGGAGTTTATAGGCGTGAAGAACAGTGTAATACGTTGTCAAGGTTGTCGTAACATTGTCTGGCAGCCACAAGGCACACAAGATGATTTCTTCTCAAGAGGTGACAAAAGAACACAGTCAAAGAATTCTGATATCATAGACGTTGAATTTGAGGAGAAGTGATGAAAACCGATATATAACTCAATTTGGAGATGATGTTAACCTGTTCCATTCGGGACCAACAAGCTGGAAAAATAGGAATGCAATCATAAGCTGGAGAAAGAGAAAAGTGTGTTCCTGTTTAGGATGCCTACACAGTCACACACTCGGATTCTAGGAATTGATTTTGGTTAAGATGTTGCTGCTATATTCTATATGTTGGAATCTGAAATAGTCACATCTGAAATAGTCACATTGAGAAGCATAATGCTGCTTATCTTCTTTTTTGGGATCTTTGTTTCTACATTTAGAAAGCTGATAGGCTGGTATGTAATAATTTGTTCTGTTGGTGCATTCACTTCGCCATTGTACAGTAAAAGATCTCATCATACTTCGTGTGTAGATAATTTGGTTGAAGTTCGAGTGTTAAGTGTTAACTTATCCAATGTACTTGTGTTACCTGCTTTTAGGTAGCTTTTCTTTGCACCATGTCTCAATAAAAAGGGGATTATACACCTCAT ATGGCGATTTCTTTTCTTCCTCCCACTTCCATCCAGGGAAAGCTCAACCACCACAGTCACCAACGCCCCTATTTTCTCTCGTCACCGCCGCCGCCTCACCGGCTTCCTATGCGCGTGGTGGCGTTCCAGCGAGGAGACTTCGAGTCCTTGAAGCGGCGCGTATTATCAGGTGAAGCTTTGAAGGAAGTATGGCACTCCGCCAACGACGGATTCGAACAGCTTGTCTTCGACGCTAGGAAGGCTGCTGAGCGGTTTGACCGCCGTTACTCCATCTCCCGTCGCCTTTCTTCCGCCGCTGAAGCTGCCTCCGTTCGCGTTCGTGAAATGGACCGTGACTATGAGGTTACTCAGAAATGGCGAACTTTCTCTCTCGACTTCTCCCGCAATTTGCCTAGGTATAGGAAGCAGTTCAATAGTTTCATGGATACTCCCCTTGGAAGGAGTTCTGCAACAATCTTCTTCTTATGGTTTGCTTTGTCCGGATGGCTGTTTCGGTGTTTAATTATTGCCACTTGGGTATTGCCAATTGCTGGTCCTCTTCTGCTCACCGCTGTTGCTAATAAAATGACCGTAAAGGGTGCTTGCCCGGCATGCAAGAGGGAGTTTATAGGCGTGAAGAACAGTGTAATACGTTGTCAAGGTTGTCGTAACATTGTCTGGCAGCCACAAGGCACACAAGATGATTTCTTCTCAAGAGGTGACAAAAGAACACAGTCAAAGAATTCTGATATCATAGACGTTGAATTTGAGGAGAAGTGA MAISFLPPTSIQGKLNHHSHQRPYFLSSPPPPHRLPMRVVAFQRGDFESLKRRVLSGEALKEVWHSANDGFEQLVFDARKAAERFDRRYSISRRLSSAAEAASVRVREMDRDYEVTQKWRTFSLDFSRNLPRYRKQFNSFMDTPLGRSSATIFFLWFALSGWLFRCLIIATWVLPIAGPLLLTAVANKMTVKGACPACKREFIGVKNSVIRCQGCRNIVWQPQGTQDDFFSRGDKRTQSKNSDIIDVEFEEK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12158.1 vs. NCBI nr
Match: gi|902170043|gb|KNA07768.1| (hypothetical protein SOVF_168930 [Spinacia oleracea]) HSP 1 Score: 509.2 bits (1310), Expect = 4.100e-141 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo12158.1 vs. NCBI nr
Match: gi|731331547|ref|XP_010676716.1| (PREDICTED: uncharacterized protein LOC104892467 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 399.1 bits (1024), Expect = 5.900e-108 Identity = 203/257 (78.99%), Postives = 226/257 (87.94%), Query Frame = 1
BLAST of Spo12158.1 vs. NCBI nr
Match: gi|823252696|ref|XP_012458959.1| (PREDICTED: uncharacterized protein LOC105779655 [Gossypium raimondii]) HSP 1 Score: 309.3 bits (791), Expect = 6.200e-81 Identity = 149/229 (65.07%), Postives = 182/229 (79.48%), Query Frame = 1
BLAST of Spo12158.1 vs. NCBI nr
Match: gi|698488963|ref|XP_009791066.1| (PREDICTED: uncharacterized protein LOC104238417 [Nicotiana sylvestris]) HSP 1 Score: 308.9 bits (790), Expect = 8.100e-81 Identity = 154/228 (67.54%), Postives = 181/228 (79.39%), Query Frame = 1
BLAST of Spo12158.1 vs. NCBI nr
Match: gi|697140000|ref|XP_009624097.1| (PREDICTED: uncharacterized protein LOC104115216 [Nicotiana tomentosiformis]) HSP 1 Score: 306.6 bits (784), Expect = 4.000e-80 Identity = 151/225 (67.11%), Postives = 180/225 (80.00%), Query Frame = 1
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QM56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168930 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 2.800e-141 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFH6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102440 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 4.100e-108 Identity = 203/257 (78.99%), Postives = 226/257 (87.94%), Query Frame = 1
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Match: A0A0D2THI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G029700 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.300e-81 Identity = 149/229 (65.07%), Postives = 182/229 (79.48%), Query Frame = 1
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NPP1_GOSAR (Replicase polyprotein 1ab OS=Gossypium arboreum GN=F383_19534 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.400e-79 Identity = 146/235 (62.13%), Postives = 181/235 (77.02%), Query Frame = 1
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HN88_SOLCH (Putative replicase polyprotein 1ab-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 5.800e-78 Identity = 147/225 (65.33%), Postives = 178/225 (79.11%), Query Frame = 1
BLAST of Spo12158.1 vs. TAIR (Arabidopsis)
Match: AT2G44870.1 (unknown protein) HSP 1 Score: 283.5 bits (724), Expect = 1.300e-76 Identity = 145/245 (59.18%), Postives = 178/245 (72.65%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12158.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12158.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12158.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo12158.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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