Spo12163 (gene)

Overview
NameSpo12163
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 33536673 .. 33539771 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCCTATTATTTCTTCTTCCTCTGTTTCTTTTACTCGATTTTCTCATTTCTTCTCTTCTGATCATTTTCTGCTAATTTTAGGTACGGTGTCTCTCTCTTCCTTTCTATCTTCTCTGATTTTGTTATCTGCAATTTAATATTCTGGGTTAATTTTGATGGGTGTTGAGCAATATTTTTGTTTATTTTGCGAGTTTTTGACTTTGATCAAAGCTCTTTTACATGTTTTCAATGCTGCGATCATGTACTTTATATTTTCTGGAGTACCCAGATTTCCTTTTTTGCAGATTTATTTTTATGAGATTACATGCAATCCTGTGTTTGACTTTTGTGATTAATCTTTGATGTTATTTTGGAAAATGATATTATGATCAGTTGATCACATTTATTTGTTCGATTAAGATTATATGAAATGTCAACTGATTTTGTTGTATAAATTGTTGGTTCATTTTTCCCCCAATTGTAGGGAATATTATTTTACTTACATAGTTACATTCATGCAAAAAATAAAAATAAAAATTCGTTGTGTTGTGATTGATTTAGGTTTTGGATCTGGTGTGATTGTTTTGAAGATAATGAAGATTGGGAAGATGTTGCCTTAGTTTTTAACTTTCTTGGGCATTTGTTTGTACTGTTGTGTTGTATTCAGAATTTTATTTGTGTAGATGTTTTGCTAGAGAAAGTGTTTGATTATTATCTGAAGTTGTGTTTATAATACAAGTCTAGTTAGCCATTCTTTGCTATTCTATTGGTAGGATAAAAGACAGTTACTGCTTCAAAATCGAATTTTCTGATCAAATTGGAGAGTTGTCTGATTCGCCTTATTTTAGCATGTTTTATTTGGGTGTATTAGGAGCCGCAGTGGCACCAAATGTAGACGGGGTTTGATCCCAAGTCTCGGGTACCTCCCTCAAGTCTTTAACCAACTATGTTATTTGGTGTCTATTGATCACTCCGTCTCTAAAAGATTACTTTTTTTGGGTGTCCCTTTGCCAACATACCTTAAATGGTAAATTTTTCCACCCGTTTTCTCCCTATCTCCCTCCTCATGAGCCTACTCTATCAACCTATGTGCATATTTTACAACTAATTCTTAATAAAGTGAATTTTGGCTATTGGACAATTTTTTAGGAACAGAGAGTATTTTCGAGCATGTTGCACATGTACTTGCACGTATGCCTATGGAAATATGCTTATCATGTGCACTGGATTCGAAGTCGCTATCAATCTAGTTCCGACTGTTGAAATTTTACTACCCCTGTACCCCTTTCCCCCGGAAGGGTGTGTTTTGCAACTTATTTGCTTAGTAAATTTCAGTTGAAGCTAGGAACAACTAGACTGCCCTCAACTAGCCGACCTTTTTTGTTCATATTTTTTTTCTTCTTATATGCGATTGCAAGGATGAAATTAATAACTTAATCAGGCTTCCTATCATTGTTATTCTTTTGCTCGACAAGCATGTTTTCTTAGCGTTTGAATGGTCTATATTTGTTCTATTATGAATGGGATCTGTCACTAGATAAATCGTGGAGTAACTTATTGACCATGTTTAATTTGTATGCATTAGTTTGTTGAAGCAAACATGGGGGGTGGAAAGGACAACTATAATGAATCTGACAAAGGACTGTTCTCAAATATTGCTGGTCTTGCTGGTGGACATGGTGGCCATGGAGGACACGGATACCCACCTCAGCAAGGAGGCTACCCACCTCATCAGGGTGGCTACCCGCCACAACAAGGTGGCTACCCACCTCAGCAGGGTGGCTACCCACCTCAAGGCTATCCTCCCGCCGGATATCCTCAACACGGTGGTTACCCACCTCAGCAGGGAGGCTACCCACCTCAAGGCTATCCTCCTAATGCTTATCCTGGTGGTCATGGTTCGCATCAATCTGGAGGTCATGGCTCACATTCAGGTAATAATACTTAAATAGAGGAGTTTGAGTTATGTACATAACATCGGTAATACTTCATCCGTTCCTTGAATATCGCACCAATTTGATTTTTACTCTATTCACACTACGACTTTTTGGAGTCATGTGAGATCTTGTTAGATTCGTATCGATATATATTTTCTAAATATCATTCTTTTTCTTTTTAATTTTACTCATACATAATTTGAGATATTAAGAGTCAAACTAGTGTATTAAAGTAGTAAAAGTCAACCATGGTGCAATATGTAAGGAACGGAGGAATTATATCATTTTTCGCATTAATATCTTTTATATAATTTGTTGGTCTGGTGTCCTTGTTCAGGTGGATCAGGAGGCATGGGTGCCATGGGTGGAATTCTAGCTGGAGGTGCTGCGGCCGCTGCAGCAGCATATGGAGCTCATAAGTTGACACAGGGTTCACATGGTTCTCACGGTGGTGGTATGCTTGGTGGTTTTGGTGGTGGTTCCCATGGTGGTGGCATGTTTGGTGGCTCTCATGGTGGTGGCTACGGTCATCATGGAGGAAAGTTCAAGCACGGGAAACACGGCAAGTTCAAGGGTGGCAAACATAAGGGTGGCATGTTCGGAGGTGGAAAGAAGTTCAAGAAGTGGAAGTAATTGGGATGTCCCCATTTCAGTATACATACCTAATAACTTAAATGACTACTTATTTACTTGTTGTGCTTAAGGATTATGTTGGATGTAGTGTTGTATTTGTTGTCATGGATTGTTCTCCTTTGTGGCCTGAACCAGTCAGTGCGGCATCTTCTTGACCATTGCGATTTAGATATATACATGAATGGAGCTTGTGTGGCTTGTCTTTCCTGATTTCACGTTCTAATTTGAGGGTTTCTTTGACTAGAAATATTGCTGCATTTAATTCAGTTTGTTTCATTGTATGGTTTAATTTAACAGAGCATTTTGCTGTTGATATCATGATATGTGAACTAAAATTATCCAAATAATACAATGTTTGTTTCTGCTCATCTTTAGTTATATGACAAATCATATGTAGTACTCGTAGTATCATATAATCGATTGTGTTTGTTAATAAGTACAAAACTTGAATGCGAAAAGGATCCTTCCAATTTGCCGTATCAAATTAGAACATAATGGATTTCAAAATTTGTTTATATTACAAAAAAATCGCGGTAAACTGCGCCATA

mRNA sequence

CTTCCCTATTATTTCTTCTTCCTCTGTTTCTTTTACTCGATTTTCTCATTTCTTCTCTTCTGATCATTTTCTGCTAATTTTAGTTTGTTGAAGCAAACATGGGGGGTGGAAAGGACAACTATAATGAATCTGACAAAGGACTGTTCTCAAATATTGCTGGTCTTGCTGGTGGACATGGTGGCCATGGAGGACACGGATACCCACCTCAGCAAGGAGGCTACCCACCTCATCAGGGTGGCTACCCGCCACAACAAGGTGGCTACCCACCTCAGCAGGGTGGCTACCCACCTCAAGGCTATCCTCCCGCCGGATATCCTCAACACGGTGGTTACCCACCTCAGCAGGGAGGCTACCCACCTCAAGGCTATCCTCCTAATGCTTATCCTGGTGGTCATGGTTCGCATCAATCTGGAGGTCATGGCTCACATTCAGGTGGATCAGGAGGCATGGGTGCCATGGGTGGAATTCTAGCTGGAGGTGCTGCGGCCGCTGCAGCAGCATATGGAGCTCATAAGTTGACACAGGGTTCACATGGTTCTCACGGTGGTGGTATGCTTGGTGGTTTTGGTGGTGGTTCCCATGGTGGTGGCATGTTTGGTGGCTCTCATGGTGGTGGCTACGGTCATCATGGAGGAAAGTTCAAGCACGGGAAACACGGCAAGTTCAAGGGTGGCAAACATAAGGGTGGCATGTTCGGAGGTGGAAAGAAGTTCAAGAAGTGGAAGTAATTGGGATGTCCCCATTTCAGTATACATACCTAATAACTTAAATGACTACTTATTTACTTGTTGTGCTTAAGGATTATGTTGGATGTAGTGTTGTATTTGTTGTCATGGATTGTTCTCCTTTGTGGCCTGAACCAGTCAGTGCGGCATCTTCTTGACCATTGCGATTTAGATATATACATGAATGGAGCTTGTGTGGCTTGTCTTTCCTGATTTCACGTTCTAATTTGAGGGTTTCTTTGACTAGAAATATTGCTGCATTTAATTCAGTTTGTTTCATTGTATGGTTTAATTTAACAGAGCATTTTGCTGTTGATATCATGATATGTGAACTAAAATTATCCAAATAATACAATGTTTGTTTCTGCTCATCTTTAGTTATATGACAAATCATATGTAGTACTCGTAGTATCATATAATCGATTGTGTTTGTTAATAAGTACAAAACTTGAATGCGAAAAGGATCCTTCCAATTTGCCGTATCAAATTAGAACATAATGGATTTCAAAATTTGTTTATATTACAAAAAAATCGCGGTAAACTGCGCCATA

Coding sequence (CDS)

ATGGGGGGTGGAAAGGACAACTATAATGAATCTGACAAAGGACTGTTCTCAAATATTGCTGGTCTTGCTGGTGGACATGGTGGCCATGGAGGACACGGATACCCACCTCAGCAAGGAGGCTACCCACCTCATCAGGGTGGCTACCCGCCACAACAAGGTGGCTACCCACCTCAGCAGGGTGGCTACCCACCTCAAGGCTATCCTCCCGCCGGATATCCTCAACACGGTGGTTACCCACCTCAGCAGGGAGGCTACCCACCTCAAGGCTATCCTCCTAATGCTTATCCTGGTGGTCATGGTTCGCATCAATCTGGAGGTCATGGCTCACATTCAGGTGGATCAGGAGGCATGGGTGCCATGGGTGGAATTCTAGCTGGAGGTGCTGCGGCCGCTGCAGCAGCATATGGAGCTCATAAGTTGACACAGGGTTCACATGGTTCTCACGGTGGTGGTATGCTTGGTGGTTTTGGTGGTGGTTCCCATGGTGGTGGCATGTTTGGTGGCTCTCATGGTGGTGGCTACGGTCATCATGGAGGAAAGTTCAAGCACGGGAAACACGGCAAGTTCAAGGGTGGCAAACATAAGGGTGGCATGTTCGGAGGTGGAAAGAAGTTCAAGAAGTGGAAGTAA

Protein sequence

MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQGGYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGKFKHGKHGKFKGGKHKGGMFGGGKKFKKWK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12163.1Spo12163.1mRNA


Homology
[Close]
BLAST of Spo12163.1 vs. NCBI nr
Match: gi|902237957|gb|KNA24989.1| (hypothetical protein SOVF_010640 [Spinacia oleracea])

HSP 1 Score: 393.7 bits (1010), Expect = 2.100e-106
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG 60
           MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG
Sbjct: 1   MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG 60

Query: 61  GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM 120
           GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM
Sbjct: 61  GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM 120

Query: 121 GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK 180
           GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK
Sbjct: 121 GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK 180

Query: 181 FKHGKHGKFKGGKHKGGMFGGGKKFKKWK 210
           FKHGKHGKFKGGKHKGGMFGGGKKFKKWK
Sbjct: 181 FKHGKHGKFKGGKHKGGMFGGGKKFKKWK 209
[Close]
BLAST of Spo12163.1 vs. NCBI nr
Match: gi|731331530|ref|XP_010676707.1| (PREDICTED: glycine-rich protein A3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 233.0 bits (593), Expect = 4.700e-58
Identity = 160/222 (72.07%), Postives = 166/222 (74.77%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQG----GY 60
           MGGGKDN++ESDKGLFSN+A GLAGGHGGHG   YPP  G YPP  G YPPQQG    GY
Sbjct: 1   MGGGKDNHDESDKGLFSNLAHGLAGGHGGHG---YPP--GQYPPPPGAYPPQQGYPPQGY 60

Query: 61  PPQQGGYPPQ--GYPPAGYPQHGGYPPQQGGYPPQ-GYPPNAYPGGHGSHQSGGHGSH-S 120
           PPQ GGYPPQ  GYPP+GYP  GGYPP   GYPPQ GYPP  YPG HGSH SGGHGSH +
Sbjct: 61  PPQHGGYPPQHGGYPPSGYPPQGGYPPS--GYPPQAGYPPGGYPGAHGSH-SGGHGSHHA 120

Query: 121 GGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSH-GGGMLGGFGGGSHGGGMFGGSH 180
           GGSGGMGAMGG+LAGGAAAAAAAYG H LT GSHG H GGG LG FGG            
Sbjct: 121 GGSGGMGAMGGMLAGGAAAAAAAYGVHHLTSGSHGHHGGGGPLGHFGG------------ 180

Query: 181 GGGYGHHGGKFKHGKHGKFKG---GKHKGGMFGGGKKFKKWK 210
               GHHGGKFKHGKHGKFK    GKH GGMFGGGKKFKKWK
Sbjct: 181 ----GHHGGKFKHGKHGKFKHGKFGKHGGGMFGGGKKFKKWK 198
[Close]
BLAST of Spo12163.1 vs. NCBI nr
Match: gi|357134839|ref|XP_003569023.1| (PREDICTED: glycine-rich protein A3 [Brachypodium distachyon])

HSP 1 Score: 182.2 bits (461), Expect = 9.400e-43
Identity = 152/223 (68.16%), Postives = 158/223 (70.85%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHG-GHGGHGYPPQQGGYPPHQGGYPPQQG----G 60
           MGGGKD ++ESDKGLFSN+  G+AGGHG    GHGYPPQQG YPP QG YPPQQG    G
Sbjct: 1   MGGGKDQHDESDKGLFSNMMHGVAGGHGYPPSGHGYPPQQG-YPPQQG-YPPQQGYPPQG 60

Query: 61  YPPQQGGYPPQ--GYPPA--GYPQHGGYPPQQGGYP-PQGYPPNAYPGGHGSHQSGGHGS 120
           YPPQQG YPP    YPPA   YP   GYPPQQ GYP P GYPP  YPG    HQ  G GS
Sbjct: 61  YPPQQG-YPPAPGAYPPAPGAYPPQHGYPPQQHGYPQPGGYPPAGYPGSSAPHQGYG-GS 120

Query: 121 HSGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGS 180
           HSGG G MG M   LAGGAAAAAAAYGAHKL+ G HG H GG  G   GG H GG +G  
Sbjct: 121 HSGGGGHMGTM---LAGGAAAAAAAYGAHKLSHGGHGGHMGG--GHMMGGGHMGG-YGVG 180

Query: 181 HGGGYGHHGGKFKHGK--HGKFKGGKH-KGGMFGGGKKFKKWK 210
           HGG  GHHGGKFKHGK  HGKFK GKH K GMFGGG KFKKWK
Sbjct: 181 HGGYGGHHGGKFKHGKHGHGKFKHGKHGKHGMFGGG-KFKKWK 212
[Close]
BLAST of Spo12163.1 vs. NCBI nr
Match: gi|1011994227|ref|XP_015950698.1| (PREDICTED: glycine-rich protein A3-like [Arachis duranensis])

HSP 1 Score: 174.5 bits (441), Expect = 2.000e-40
Identity = 141/223 (63.23%), Postives = 152/223 (68.16%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQ 60
           MGGGKD ++E DKGLF+N+A G A G    GGHGYPPQQG YPP QG YPPQ  GYPPQQ
Sbjct: 1   MGGGKDKHDEGDKGLFTNLAQGFAHG----GGHGYPPQQG-YPPQQG-YPPQ--GYPPQQ 60

Query: 61  GGYPPQGYPPA-GYPQHGGYPPQQGGYPPQ-GYPPNAYPGGHGSHQSGGHGSHSGGSGGM 120
           G YPPQGYPP  GYP   GYPPQ  GYPPQ GYPP  YP     H SG HG      GG 
Sbjct: 61  G-YPPQGYPPQHGYPPQQGYPPQ--GYPPQQGYPPAGYPP---QHASGSHG------GGH 120

Query: 121 GAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGH- 180
           GAMG +LAGGAAAAAAAYGAH+L+ GSHG+HG          +HGG     +HGGGYG+ 
Sbjct: 121 GAMGAVLAGGAAAAAAAYGAHQLSHGSHGAHG----------AHGGY----AHGGGYGYG 180

Query: 181 --HGGKFKHGKH-------GKFKGGKH-KGGMFGGGKKFKKWK 210
             HGGKFKHGKH       GKFK GKH K GMFGG  KFKKWK
Sbjct: 181 MPHGGKFKHGKHGKFKHHGGKFKHGKHGKHGMFGG--KFKKWK 187
[Close]
BLAST of Spo12163.1 vs. NCBI nr
Match: gi|573943205|ref|XP_006653982.1| (PREDICTED: glycine-rich protein A3-like isoform X1 [Oryza brachyantha])

HSP 1 Score: 172.2 bits (435), Expect = 9.800e-40
Identity = 139/222 (62.61%), Postives = 150/222 (67.57%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHG----GHGGHGYPPQQGGYPPHQGGYPPQQGGY 60
           MGGGKD + ESDKGLFSN+  G+AGGHG    G+   GYPP  G YPP  G YPP  G Y
Sbjct: 1   MGGGKDKHEESDKGLFSNMMHGVAGGHGYPPQGYPPQGYPPPPGAYPPPPGAYPPPHGAY 60

Query: 61  PPQQGGYPPQGYPPAGYPQHGGYPPQQGGYPPQ-------GYPPNAYPGGHGSHQSGGHG 120
           PP  G YPPQ     GYPQHGGYPP  GGYPP        GYPP  YPG   SHQ+ GHG
Sbjct: 61  PPPPGAYPPQ----HGYPQHGGYPP-PGGYPPPGGYPTHGGYPPAGYPG--SSHQA-GHG 120

Query: 121 SHSGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGG 180
           S  GG      MG +LAGGAAAAAAAYG HK++ GSHG  GGG + G+GG  HGG  +GG
Sbjct: 121 SSGGGH-----MGTMLAGGAAAAAAAYGVHKISSGSHG--GGGHM-GYGGYGHGG--YGG 180

Query: 181 SHGGGYGHHGGKFKHGKH-GKFKGGKHKGGMFGGGKKFKKWK 210
              GGYG HGGKFKHGKH GKFK GKH  GMFGGG KFKKWK
Sbjct: 181 H--GGYG-HGGKFKHGKHGGKFKHGKHGHGMFGGG-KFKKWK 200
[Close]
BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1D0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010640 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.400e-106
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG 60
           MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG
Sbjct: 1   MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG 60

Query: 61  GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM 120
           GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM
Sbjct: 61  GYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAM 120

Query: 121 GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK 180
           GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK
Sbjct: 121 GGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHGGK 180

Query: 181 FKHGKHGKFKGGKHKGGMFGGGKKFKKWK 210
           FKHGKHGKFKGGKHKGGMFGGGKKFKKWK
Sbjct: 181 FKHGKHGKFKGGKHKGGMFGGGKKFKKWK 209
[Close]
BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJP4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102390 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.300e-58
Identity = 160/222 (72.07%), Postives = 166/222 (74.77%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQG----GY 60
           MGGGKDN++ESDKGLFSN+A GLAGGHGGHG   YPP  G YPP  G YPPQQG    GY
Sbjct: 1   MGGGKDNHDESDKGLFSNLAHGLAGGHGGHG---YPP--GQYPPPPGAYPPQQGYPPQGY 60

Query: 61  PPQQGGYPPQ--GYPPAGYPQHGGYPPQQGGYPPQ-GYPPNAYPGGHGSHQSGGHGSH-S 120
           PPQ GGYPPQ  GYPP+GYP  GGYPP   GYPPQ GYPP  YPG HGSH SGGHGSH +
Sbjct: 61  PPQHGGYPPQHGGYPPSGYPPQGGYPPS--GYPPQAGYPPGGYPGAHGSH-SGGHGSHHA 120

Query: 121 GGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSH-GGGMLGGFGGGSHGGGMFGGSH 180
           GGSGGMGAMGG+LAGGAAAAAAAYG H LT GSHG H GGG LG FGG            
Sbjct: 121 GGSGGMGAMGGMLAGGAAAAAAAYGVHHLTSGSHGHHGGGGPLGHFGG------------ 180

Query: 181 GGGYGHHGGKFKHGKHGKFKG---GKHKGGMFGGGKKFKKWK 210
               GHHGGKFKHGKHGKFK    GKH GGMFGGGKKFKKWK
Sbjct: 181 ----GHHGGKFKHGKHGKFKHGKFGKHGGGMFGGGKKFKKWK 198
[Close]
BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Match: I1HMG4_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_2g37690 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.600e-43
Identity = 152/223 (68.16%), Postives = 158/223 (70.85%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHG-GHGGHGYPPQQGGYPPHQGGYPPQQG----G 60
           MGGGKD ++ESDKGLFSN+  G+AGGHG    GHGYPPQQG YPP QG YPPQQG    G
Sbjct: 1   MGGGKDQHDESDKGLFSNMMHGVAGGHGYPPSGHGYPPQQG-YPPQQG-YPPQQGYPPQG 60

Query: 61  YPPQQGGYPPQ--GYPPA--GYPQHGGYPPQQGGYP-PQGYPPNAYPGGHGSHQSGGHGS 120
           YPPQQG YPP    YPPA   YP   GYPPQQ GYP P GYPP  YPG    HQ  G GS
Sbjct: 61  YPPQQG-YPPAPGAYPPAPGAYPPQHGYPPQQHGYPQPGGYPPAGYPGSSAPHQGYG-GS 120

Query: 121 HSGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGS 180
           HSGG G MG M   LAGGAAAAAAAYGAHKL+ G HG H GG  G   GG H GG +G  
Sbjct: 121 HSGGGGHMGTM---LAGGAAAAAAAYGAHKLSHGGHGGHMGG--GHMMGGGHMGG-YGVG 180

Query: 181 HGGGYGHHGGKFKHGK--HGKFKGGKH-KGGMFGGGKKFKKWK 210
           HGG  GHHGGKFKHGK  HGKFK GKH K GMFGGG KFKKWK
Sbjct: 181 HGGYGGHHGGKFKHGKHGHGKFKHGKHGKHGMFGGG-KFKKWK 212
[Close]
BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Match: A0A0D9WC48_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.400e-40
Identity = 139/223 (62.33%), Postives = 148/223 (66.37%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQ 60
           MGGGKD ++ESDKGLFSN+  G+AGGHG +   GYPP  G YPP  G YPP  G YPP  
Sbjct: 1   MGGGKDKHDESDKGLFSNMMHGVAGGHG-YPPQGYPPPPGAYPPPPGAYPPPPGAYPPPP 60

Query: 61  GGYPPQ-GYP-------PAGYPQHGGYPPQQGGYPPQ-GYPPNAYPGGHGSHQSGGHGSH 120
           G YPPQ GYP       P GYPQHGGYPP  GGYP   GYPP  YPG  G HQ  GHGS 
Sbjct: 61  GAYPPQHGYPQPGGYPPPGGYPQHGGYPP-PGGYPQHGGYPPAGYPGSSG-HQ--GHGSS 120

Query: 121 SGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGG-S 180
            GG  G GA  G+LAGGAAAAAAAYG HK++   HG HGGG   G+GG       FGG  
Sbjct: 121 GGGHMGPGA--GLLAGGAAAAAAAYGMHKISSHGHGGHGGGGHMGYGG-------FGGYG 180

Query: 181 HGGGYGHHGGKFKHGK---HGKFKGGKHKGGMFGGGKKFKKWK 210
           H    GHHGGKFKHGK   HGKFK GKH  GMFGGG KFKKWK
Sbjct: 181 HSSYGGHHGGKFKHGKHGHHGKFKHGKHGHGMFGGG-KFKKWK 208
[Close]
BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Match: A0A0D9WC46_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.400e-40
Identity = 139/223 (62.33%), Postives = 148/223 (66.37%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIA-GLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQ 60
           MGGGKD ++ESDKGLFSN+  G+AGGHG +   GYPP  G YPP  G YPP  G YPP  
Sbjct: 13  MGGGKDKHDESDKGLFSNMMHGVAGGHG-YPPQGYPPPPGAYPPPPGAYPPPPGAYPPPP 72

Query: 61  GGYPPQ-GYP-------PAGYPQHGGYPPQQGGYPPQ-GYPPNAYPGGHGSHQSGGHGSH 120
           G YPPQ GYP       P GYPQHGGYPP  GGYP   GYPP  YPG  G HQ  GHGS 
Sbjct: 73  GAYPPQHGYPQPGGYPPPGGYPQHGGYPP-PGGYPQHGGYPPAGYPGSSG-HQ--GHGSS 132

Query: 121 SGGSGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGG-S 180
            GG  G GA  G+LAGGAAAAAAAYG HK++   HG HGGG   G+GG       FGG  
Sbjct: 133 GGGHMGPGA--GLLAGGAAAAAAAYGMHKISSHGHGGHGGGGHMGYGG-------FGGYG 192

Query: 181 HGGGYGHHGGKFKHGK---HGKFKGGKHKGGMFGGGKKFKKWK 210
           H    GHHGGKFKHGK   HGKFK GKH  GMFGGG KFKKWK
Sbjct: 193 HSSYGGHHGGKFKHGKHGHHGKFKHGKHGHGMFGGG-KFKKWK 220
[Close]
BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.200e-24
Identity = 100/171 (58.48%), Postives = 108/171 (63.16%), Query Frame = 1 

		  

Query: 1   MGGGKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQG 60
           MGGG D +N+ DKGLFSN+AG   G    GGH YPP  G YPP  GGYPPQ  GYPP  G
Sbjct: 1   MGGG-DGHNDQDKGLFSNLAGGLAG----GGH-YPP--GQYPPAAGGYPPQ--GYPPAGG 60

Query: 61  GYPPQGYPPA--GYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMG 120
           GYPPQGYPPA  GYP   GYPP  GGYPPQGYPP         H SG    H  G GG  
Sbjct: 61  GYPPQGYPPAGGGYPPQ-GYPPAGGGYPPQGYPP-------AGHHSGSSAPHHSGHGG-- 120

Query: 121 AMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGG-GMFGG 169
            + G++AGG AAAAAAYG H +TQG HGSH     GG GG +HG  GM  G
Sbjct: 121 -VAGMVAGGRAAAAAAYGVHHMTQG-HGSH-----GGHGGYAHGAMGMMPG 144
[Close]
BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.300e-12
Identity = 53/81 (65.43%), Postives = 53/81 (65.43%), Query Frame = 1 

		  

Query: 33  GYPPQQG-----GYPPHQG-----GYPPQQG-----GYPPQQGGYPPQGYPP-AGYPQHG 92
           GYPPQQG     GYPP QG     GYPPQQG     GYPPQQG  P QGYPP  GYP   
Sbjct: 51  GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQ 110

Query: 93  GYPPQQGGYPPQGYPP-NAYP 97
           GYPPQQ GYPPQGYPP   YP
Sbjct: 111 GYPPQQ-GYPPQGYPPQQGYP 130
[Close]
BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Match: OPSD_SEPOF (Rhodopsin OS=Sepia officinalis GN=RHO PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.600e-8
Identity = 47/71 (66.20%), Postives = 47/71 (66.20%), Query Frame = 1 

		  

Query: 34  YPPQQGGYPPHQGGYPPQ-------QGGYPPQQGGYPPQGYPPA-GYPQHGGYPPQQGGY 93
           YPPQ G YPP QGGYPPQ       QGGYPPQ    PPQGYPPA GYP   GYPP QG  
Sbjct: 387 YPPQ-GAYPP-QGGYPPQGYPPPPAQGGYPPQGYPPPPQGYPPAQGYPPQ-GYPPPQGA- 446

Query: 94  PPQGYPPNAYP 97
           PPQG PP A P
Sbjct: 447 PPQGAPPQAAP 453
[Close]
BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.200e-6
Identity = 38/60 (63.33%), Postives = 38/60 (63.33%), Query Frame = 1 

		  

Query: 37  QQGGYPPHQGGYPPQQGGYPPQQGGYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYP 96
           QQ  YPP   GYPPQ G  PP   GYPPQGYPP GYP  G YPP   G PPQG PP A P
Sbjct: 379 QQPAYPPQ--GYPPQ-GYPPPPPQGYPPQGYPPQGYPPQG-YPPPPQGPPPQGPPPQAAP 434
[Close]
BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.200e-6
Identity = 38/60 (63.33%), Postives = 38/60 (63.33%), Query Frame = 1 

		  

Query: 37  QQGGYPPHQGGYPPQQGGYPPQQGGYPPQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYP 96
           QQ  YPP   GYPPQ G  PP   GYPPQGYPP GYP  G YPP   G PPQG PP A P
Sbjct: 386 QQPAYPPQ--GYPPQ-GYPPPPPQGYPPQGYPPQGYPPQG-YPPPPQGPPPQGPPPQAAP 441
[Close]
BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Match: AT4G19200.1 (proline-rich family protein)

HSP 1 Score: 131.0 bits (328), Expect = 8.800e-31
Identity = 117/216 (54.17%), Postives = 129/216 (59.72%), Query Frame = 1 

		  

Query: 1   MGGGKD-NYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQ 60
           MGGGKD +++E +KG           HG  GG  YPP QGGYPP   GYPPQQG YPP  
Sbjct: 1   MGGGKDKHHDEQEKGF----------HGFPGGGHYPPAQGGYPPQ--GYPPQQG-YPPA- 60

Query: 61  GGYPPQGYPPAGYPQH-GGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMG 120
           GGYPP GYPP  YP   GGYPP  GGYPP GYP    PG H       H  HSGG     
Sbjct: 61  GGYPPAGYPPGAYPAAPGGYPPAPGGYPPAGYPA---PGAH-------HSGHSGGG---- 120

Query: 121 AMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHG 180
            +GG++AG A AAAAAYGAH +   SH  +G  +        HGG     +HG G+G H 
Sbjct: 121 -LGGMIAGAAGAAAAAYGAHHVGHASHNPYGHAV-------GHGGYGHAPAHGFGHGGH- 179

Query: 181 GKFKHGKH-GKFKGGKH----KGGMFGGGKKFKKWK 210
           GKFKHGKH GKFK GKH    K GMFGGG KFKKWK
Sbjct: 181 GKFKHGKHGGKFKHGKHGKHGKHGMFGGGGKFKKWK 179
[Close]
BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Match: AT5G45350.1 (proline-rich family protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.900e-26
Identity = 111/216 (51.39%), Postives = 120/216 (55.56%), Query Frame = 1 

		  

Query: 4   GKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQ---QGGYPPQQG 63
           G DN N+ DKG                 HGYPP   GYPP  G YPP    Q GYPP  G
Sbjct: 2   GGDNDNDKDKGF----------------HGYPP--AGYPP-PGAYPPAGYPQQGYPPPPG 61

Query: 64  GYPPQGYPPAGYPQH-GGYPPQQG--GYPPQ----GYPPNAYPGGHGSHQSGGHGSHSGG 123
            YPP GYPP  YP   GGYPP  G  GYPP     GYPP     GHG +   G+ +H   
Sbjct: 62  AYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAPGYGGYPPAP---GHGGYPPAGYPAHH-- 121

Query: 124 SGGMGAMGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGG 183
           SG  G +GG++AG    AAAAYGAH +   SHG +G    G      HG   FG  HG G
Sbjct: 122 SGHAGGIGGMIAG----AAAAYGAHHVAHSSHGPYGHAAYG------HG---FGHGHGYG 177

Query: 184 YGHHGGKFKHGKHGKFKGGKHKGGMFGGGKKFKKWK 210
           YGH  GKFKHGKHGKFK GKH  GMFGGG KFKKWK
Sbjct: 182 YGHGHGKFKHGKHGKFKHGKH--GMFGGG-KFKKWK 177
[Close]
BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Match: AT5G17650.1 (glycine/proline-rich protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.700e-19
Identity = 104/215 (48.37%), Postives = 111/215 (51.63%), Query Frame = 1 

		  

Query: 4   GKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQGGYP 63
           G D +N SD+G F N+AG AGG        YPP   GY  H  GY      YPP     P
Sbjct: 2   GNDQHNHSDRGFFHNLAGFAGGQ-------YPPHGHGYGHHGHGYGSSY-PYPPPP---P 61

Query: 64  PQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPG----GHGSHQSGGHGSHSGGSGGMGA 123
           P GYPP  YP HGGYPP   GYPP GYPP  YP      HG  +    G H GG      
Sbjct: 62  PHGYPPVAYPPHGGYPP--AGYPPAGYPPAGYPAHGYPSHGYPRPSHSGHHHGG------ 121

Query: 124 MGGILAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGHHG- 183
           +G I+AGG AAAA   GAH      H SH  G  G   G           HG GYG+HG 
Sbjct: 122 IGAIIAGGVAAAA---GAH------HMSHHHGHYGHHHG-----------HGYGYGYHGH 173

Query: 184 GKFKHG--KHGKFKGGKHKGGMFG--GGKKFKKWK 210
           GKFKHG  KHGKF  GKH  GMFG   GK FKKWK
Sbjct: 182 GKFKHGKFKHGKF--GKH--GMFGKHKGKFFKKWK 173
[Close]
BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Match: AT1G31750.1 (proline-rich family protein)

HSP 1 Score: 78.6 bits (192), Expect = 5.200e-15
Identity = 100/217 (46.08%), Postives = 109/217 (50.23%), Query Frame = 1 

		  

Query: 4   GKDNYNESDKGLFSNIAGLAGGHGGHGGHGYPPQQGGYPPHQGGYPPQQGGYPPQQGGYP 63
           GKD+++E DK  FS        H  H GHGYPP  G YPP      P QG YPP  GGYP
Sbjct: 2   GKDDHHEQDKRFFS--------HHNHHGHGYPP--GAYPP------PPQGAYPPP-GGYP 61

Query: 64  PQGYPPAGYPQHGGYPPQQGGYPPQGYPPNAYPGGHGSHQSGGHGSHSGGSGGMGAMGGI 123
           PQGYPP   P HG YPP     PP  YPP  YPG  G     G           G +GG+
Sbjct: 62  PQGYPP---PPHG-YPPAAYPPPPGAYPPAGYPGPSGPRPGFG-----------GGVGGL 121

Query: 124 LAGGAAAAAAAYGAHKLTQGSHGSHGGGMLGGFGGGSHGGGMFGGSHGGGYGH------H 183
           +AG A AAAAA G H      H  H GG  G  G G +  G FG   GG Y         
Sbjct: 122 IAGAATAAAAAMGGH------HAGHHGG-YGHHGHGKYKRGFFG---GGKYKRGKHSMFG 176

Query: 184 GGKFKHGKHGKFKGGKHKGGMFGG--GKKF---KKWK 210
           GGK+K GKHG F G + K GMFGG  GK     KKWK
Sbjct: 182 GGKYKRGKHGMFGGKRSKHGMFGGKRGKGMFGRKKWK 176
[Close]
BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Match: AT3G49845.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 9.500e-9
Identity = 43/68 (63.24%), Postives = 44/68 (64.71%), Query Frame = 1 

		  

Query: 35  PPQQGGYPPHQGGYPPQQGGYPPQQGGYPPQGYPPAGYPQHGGYPPQQG---GYPPQGYP 94
           PPQ  GYPP +G YPP   GYPP   GYPP  YP AGYP  G  PPQQG   GYP QGYP
Sbjct: 14  PPQ--GYPPKEG-YPP--AGYPPP-AGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYP 73

Query: 95  PNAYPGGH 100
           P  YP GH
Sbjct: 74  PPQYPQGH 75
The following BLAST results are available for this feature:
BLAST of Spo12163.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902237957|gb|KNA24989.1|2.1e-106100.hypothetical protein SOVF_0106... [more]
gi|731331530|ref|XP_010676707.1|4.7e-5872.0PREDICTED: glycine-rich protei... [more]
gi|357134839|ref|XP_003569023.1|9.4e-4368.1PREDICTED: glycine-rich protei... [more]
gi|1011994227|ref|XP_015950698.1|2.0e-4063.2PREDICTED: glycine-rich protei... [more]
gi|573943205|ref|XP_006653982.1|9.8e-4062.6PREDICTED: glycine-rich protei... [more]
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BLAST of Spo12163.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S1D0_SPIOL1.4e-106100.Uncharacterized protein OS=Spi... [more]
A0A0J8CJP4_BETVU3.3e-5872.0Uncharacterized protein OS=Bet... [more]
I1HMG4_BRADI6.6e-4368.1Uncharacterized protein OS=Bra... [more]
A0A0D9WC48_9ORYZ1.4e-4062.3Uncharacterized protein OS=Lee... [more]
A0A0D9WC46_9ORYZ1.4e-4062.3Uncharacterized protein OS=Lee... [more]
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BLAST of Spo12163.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GRP3_DAUCA1.2e-2458.4Glycine-rich protein A3 OS=Dau... [more]
ANXA7_DICDI2.3e-1265.4Annexin A7 OS=Dictyostelium di... [more]
OPSD_SEPOF2.6e-866.2Rhodopsin OS=Sepia officinalis... [more]
OPSD_ALLSU3.2e-663.3Rhodopsin (Fragment) OS=Allote... [more]
OPSD_LOLFO3.2e-663.3Rhodopsin OS=Loligo forbesi GN... [more]
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BLAST of Spo12163.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G19200.18.8e-3154.1proline-rich family protein[more]
AT5G45350.12.9e-2651.3proline-rich family protein[more]
AT5G17650.12.7e-1948.3glycine/proline-rich protein[more]
AT1G31750.15.2e-1546.0proline-rich family protein[more]
AT3G49845.19.5e-963.2unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31248FAMILY NOT NAMEDcoord: 1..209
score: 3.5

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo267350.67Barchart | Table
Spo233610.66Barchart | Table
Spo265440.66Barchart | Table