Spo12233 (gene)

Overview
NameSpo12233
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_104 : 1124779 .. 1127147 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCCATCTTATTCCAGGGTATCCAACTTTTTAATTTTCCATTGTTTTCTTTTCTTTTTCCGAATACTTCAAAATTGTGGTTGTTATCTGTTGATCTCTATGGTTGGTTCACCTTACTAATGCCAAGAAGTAATCCAACATTTTGAGGATTAGTAGATCTCATTTATCATGAAGAACTGTTTTTATGTACTGAGGGTTTAGGAGGTTTTGTCTTAATTTTCAATCCATTAAATCCTTAACTTTATTCCTTGCTTGCCATTTGAGGTTCATGTTGTATTTGTGCTTATTATGATTTGTGTACTAGGCTTTGTTTCTAATTACCTCTGCTCAAGATCTTTAAATATGATTATATTTCTCTTTCACTAGTAGAAAAACATCCAGTGCACTAGTGTAGTCAATCGAGTAATGGAGAACATACAAAAGCTTTGGAATTTTATTGTAGGGCACTAGAAGTCTTGTATGTGATACTTCTTGTAGATTGATATCAACATATCATTGCTGCGAATATTTTGACCAATTCATCAATACCTTGTGTGGTTTGCCTGACAAGCTTCTGCATATTAATCTCTGAGTTTATTGCCCCAAATGTTTTGGTTATTGCAGTCGGCAACCCTCCAAATCATGCGTATAAAAATCATAAAACTATCAGTGTAGTACTGTAGTAGTGTACAACATTTAAGAACTGCTAGTGTGCTTTATTTGTTTCGTCCTGAATCTCCGCCTCTCCAGTATCAATGCTCTTATTGTCAGCATTATTAGGCTCTTAATGTCAGACATTAAGTGTAGTTTCCCATTTTTTCATGAAATAAGTTCAGTACTCCTTGAATAATGATGGATTTTATTTCACACCTTGTTGTCACTGTTGGGGAACCACATTATAAGCTGCACCCCTTGTTTCTATTGATTATGCACAGGGTTTTTCCATTCAACTTTTCTTAAATAAAATGTGATGGGAATATGCCCCTATAGGCTATTTTACCTGGACTCGGATACCTATACCGGACACGGGTGTGTGCTCAAGTATCCGACATGACTATTTTGTAAAAGGTTGCATGATTTTGGTCCAAAATGATGTGTCCAAGTTCCATGCCCATGTCCGAGTGTCGAGGATCCGACACGGATATTTGAGTTGAAATGAAGAGTCTAAGTACTGAAGCCTATAAGCCTTTTGGTGATCCCAGAGTTATTCCTCAATCAAGTTATAGACAAAATAATTGGCATTTATATGTTTTTTAGGGAGTTGTCCTGCCTATTCTAGATTGCCTAATATTTGTTGTCTTCTAGTGTACATGAGCATCTTAATTGTGCGGTTCTTTTGGGGATAATTCATTCAACAGTGATATTGTGTTTTTGAGGATTGCTAATTATTTGATCAGTTCTAATATGGTATTAATAACTTTCAGGACGGAATGCTTTGTATAGTTAGTTGTGGATTAAGTAATGTATCTTGTTTTTTATTTTTAGGACAAGAAAGCTAACTTCTAAGAGACATCATATTTAAGAATGATGGATTCATATTATCATTCATCTCTTGACTTAACTATGTTACTTACTATTCCTTTATTGCATTGGATCGAGTGTTTAGCTCTTTTGTTTGGTTGCATAAGCAGGGTCAGGTGTTACAAGTATCACAACTTGGGTTGTCCTTTTCATTTTTCCAGATTTCAGAGAACGGTTCTGGATTTCTTTTGAATCAACTCTTAAGTGTAGATATTGTGGCGATGTGCATGGTTGTGAATATGGTAAGGGCTGCAGATATCAAGCTTGTGAATCAGTACCGAAATTGACGGTGTCAATTCTGAGACTTGTTGCAGCTTGTAAAGAACTAAATAGAAGGCTTATAGGTTATTATCAATTTATCAGGCTATCAGCACAATAAGCTAAGTTTTTATGGCTATTGTCAATTTGTGATAGGTCACGCCTTGGTATGTGATAAATGTAGATTAAGCATTTTGCCTAGTTTTTGACATGTCGCTAATATTGTATTTTAGTTGAAAATGCAGTTCCAGCTGAATTTGGTGATACGTTTTGTAGTTTTTTGCTTTGCACCCTATGTTACTCAGACTCGGGTACGAGTGTCGGATACGGGTACGTGTCCAAGTGTCCGACACGGCTAAAATATGGACAATTTCCTTAATTTTAGACCCAAATGAAGTGTCGGAGTATCCATATCCATGTCCAGGTGTCGAGGATCCGACACGGGTACTTGAGGTAAAACGAGGAGTCCGAGTAACATAGTTTGCACGTCCTGGTATATTTGAATGAGCAACAACTTAATTTGTTTAAAGTGATTTATTGTTGGTAGCAAACTGTCACCATTAAATTGATGTTGGTAGTAAATTGTTTTGAATATGTTGCAGTGTAG

mRNA sequence

ATGCCTTCCATCTTATTCCAGGATTTCAGAGAACGGTTCTGGATTTCTTTTGAATCAACTCTTAAGTGTAGATATTGTGGCGATGTGCATGGTTGTGAATATGGTAAGGGCTGCAGATATCAAGCTTGTGAATCAGTACCGAAATTGACGGTGTCAATTCTGAGACTTGTTGCAGCTTGTAAAGAACTAAATAGAAGGCTTATAGTGTAG

Coding sequence (CDS)

ATGCCTTCCATCTTATTCCAGGATTTCAGAGAACGGTTCTGGATTTCTTTTGAATCAACTCTTAAGTGTAGATATTGTGGCGATGTGCATGGTTGTGAATATGGTAAGGGCTGCAGATATCAAGCTTGTGAATCAGTACCGAAATTGACGGTGTCAATTCTGAGACTTGTTGCAGCTTGTAAAGAACTAAATAGAAGGCTTATAGTGTAG

Protein sequence

MPSILFQDFRERFWISFESTLKCRYCGDVHGCEYGKGCRYQACESVPKLTVSILRLVAACKELNRRLIV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12233.1Spo12233.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo12233.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12233.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12233.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12233.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0008173 RNA methyltransferase activity
RNA-Seq Expression