Spo12265 (gene)

Overview
NameSpo12265
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMitochondrial import inner membrane translocase subunit Tim17 family protein
LocationSpoScf_02379 : 44620 .. 45315 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACACCAGAAACATCTCGAGAACCGTGTCCTGACCGTATCCTCGACGACTTAGGCGGTGCCTTTGCCATGGGAGCTGTCGGAGGTTCTGTCTTCCACTACGTCAGGGGTTCAATCAACGCCCCTAAAGGTGAACGCATCCTCCGAGCACTCGAAACTGTACGAATGAGTGCACCGCGTACTGGTGGTGGGTTCGCCGTGTGGGGTGGTTTGTTCTCCACTTTTGATTGTACTCTGGTCTACATCCGCCAAAAGGAGGATCCTTGGAATTCTATTTTCGCCGGCGCGGCTACCGGTGGGTTCCTTCAGGTGCGTCAGGGTCTACGCGCCTCCGGTCGTTCTGCCGCATTTGGTGGGATCCTTCTTGCTTTGATTGAAGGTGCTGGGATCATGCTTAATCGGGTTATGTCGCCGCCTGCACAGATTATGTATGAGGATCCGAGTATGGGTGCTGGGGCACCGCAGCAGATGGGGGGTTATGGGTTTGGATTTCCGGGTCAGGCGGCGAACGTTGGTGGTGGTGGGTCTGAGGAGGTGAATCAAGGTGGTAGTGGTGGTGGTGGGTTTTTTGGTGGGTGGTTTGGTGGTGATGGGAAGAAGGAAGGGAGTAGTTCAAGTAGCAGTGGGAGCGAAGCCACAGTTTTGGAGAGCTTTGATACGCCTACTCCTATGCCTAATTTTGATTACAAATGA

mRNA sequence

ATGGGAACACCAGAAACATCTCGAGAACCGTGTCCTGACCGTATCCTCGACGACTTAGGCGGTGCCTTTGCCATGGGAGCTGTCGGAGGTTCTGTCTTCCACTACGTCAGGGGTTCAATCAACGCCCCTAAAGGTGAACGCATCCTCCGAGCACTCGAAACTGTACGAATGAGTGCACCGCGTACTGGTGGTGGGTTCGCCGTGTGGGGTGGTTTGTTCTCCACTTTTGATTGTACTCTGGTCTACATCCGCCAAAAGGAGGATCCTTGGAATTCTATTTTCGCCGGCGCGGCTACCGGTGGGTTCCTTCAGGTGCGTCAGGGTCTACGCGCCTCCGGTCGTTCTGCCGCATTTGGTGGGATCCTTCTTGCTTTGATTGAAGGTGCTGGGATCATGCTTAATCGGGTTATGTCGCCGCCTGCACAGATTATGTATGAGGATCCGAGTATGGGTGCTGGGGCACCGCAGCAGATGGGGGGTTATGGGTTTGGATTTCCGGGTCAGGCGGCGAACGTTGGTGGTGGTGGGTCTGAGGAGGTGAATCAAGGTGGTAGTGGTGGTGGTGGGTTTTTTGGTGGGTGGTTTGGTGGTGATGGGAAGAAGGAAGGGAGTAGTTCAAGTAGCAGTGGGAGCGAAGCCACAGTTTTGGAGAGCTTTGATACGCCTACTCCTATGCCTAATTTTGATTACAAATGA

Coding sequence (CDS)

ATGGGAACACCAGAAACATCTCGAGAACCGTGTCCTGACCGTATCCTCGACGACTTAGGCGGTGCCTTTGCCATGGGAGCTGTCGGAGGTTCTGTCTTCCACTACGTCAGGGGTTCAATCAACGCCCCTAAAGGTGAACGCATCCTCCGAGCACTCGAAACTGTACGAATGAGTGCACCGCGTACTGGTGGTGGGTTCGCCGTGTGGGGTGGTTTGTTCTCCACTTTTGATTGTACTCTGGTCTACATCCGCCAAAAGGAGGATCCTTGGAATTCTATTTTCGCCGGCGCGGCTACCGGTGGGTTCCTTCAGGTGCGTCAGGGTCTACGCGCCTCCGGTCGTTCTGCCGCATTTGGTGGGATCCTTCTTGCTTTGATTGAAGGTGCTGGGATCATGCTTAATCGGGTTATGTCGCCGCCTGCACAGATTATGTATGAGGATCCGAGTATGGGTGCTGGGGCACCGCAGCAGATGGGGGGTTATGGGTTTGGATTTCCGGGTCAGGCGGCGAACGTTGGTGGTGGTGGGTCTGAGGAGGTGAATCAAGGTGGTAGTGGTGGTGGTGGGTTTTTTGGTGGGTGGTTTGGTGGTGATGGGAAGAAGGAAGGGAGTAGTTCAAGTAGCAGTGGGAGCGAAGCCACAGTTTTGGAGAGCTTTGATACGCCTACTCCTATGCCTAATTTTGATTACAAATGA

Protein sequence

MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAPRTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGGILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGGGGSEEVNQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12265.1Spo12265.1mRNA


Homology
[Close]
BLAST of Spo12265.1 vs. NCBI nr
Match: gi|731355407|ref|XP_010689124.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 355.9 bits (912), Expect = 5.300e-95
Identity = 189/243 (77.78%), Postives = 206/243 (84.77%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGAVGGS+FH+++GS N+PKGER+L   +T+RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSIFHFIKGSANSPKGERLLGGAQTMRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDC +VY RQKEDPWNSIFAGAATGGFLQ+RQGL+AS RSAAFGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCAMVYARQKEDPWNSIFAGAATGGFLQMRQGLKASSRSAAFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMG----AGAPQQMGGYGFGFPGQ--AANVGG 180
           ILLALIEGAGIMLNRVMSPP QIMYEDP+M      G    MG  GFG PGQ  A +  G
Sbjct: 121 ILLALIEGAGIMLNRVMSPPPQIMYEDPNMAGVGMGGQHAPMGNAGFGIPGQMKAPSNIG 180

Query: 181 GGSEEVNQGGSGGG---GFFGGWF--GGDGKKEG-SSSSSSGSEATVLESFDTPTPMPNF 232
           GGSEEVN GGS GG   GFFGGWF  GGDGKKEG +SSS  GSEA VLESFD+PTPMPNF
Sbjct: 181 GGSEEVNHGGSAGGAGSGFFGGWFGGGGDGKKEGKTSSSGGGSEAKVLESFDSPTPMPNF 240
[Close]
BLAST of Spo12265.1 vs. NCBI nr
Match: gi|902185286|gb|KNA10470.1| (hypothetical protein SOVF_144160 [Spinacia oleracea])

HSP 1 Score: 353.6 bits (906), Expect = 2.600e-94
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG 175
           ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG
Sbjct: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG 174
[Close]
BLAST of Spo12265.1 vs. NCBI nr
Match: gi|902184119|gb|KNA10244.1| (hypothetical protein SOVF_146150 [Spinacia oleracea])

HSP 1 Score: 337.4 bits (864), Expect = 1.900e-89
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGA+GGSVFHYVRGSINAPKGERILRALETVRMSAP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAIGGSVFHYVRGSINAPKGERILRALETVRMSAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDCT+VYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSA FGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCTMVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAVFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQA---ANVGG 175
           ILLALIEGAGIMLNRV+SPPAQIMYEDPSMGAGAPQ MGGYGFGFPGQA   ANVGG
Sbjct: 121 ILLALIEGAGIMLNRVVSPPAQIMYEDPSMGAGAPQ-MGGYGFGFPGQARAPANVGG 176
[Close]
BLAST of Spo12265.1 vs. NCBI nr
Match: gi|802627893|ref|XP_012076870.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas])

HSP 1 Score: 274.6 bits (701), Expect = 1.500e-70
Identity = 152/235 (64.68%), Postives = 178/235 (75.74%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G  N+P G R++   + VRM+AP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYNSPSGARLIGGTQAVRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R GG FAVWGGLFS FDCT+VY+RQKEDPWNSIFAGAATGGFL +RQGL AS RSA FGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQ--IMYED--PSMGAGAPQQMGGYGFGFPGQAANVGGGG 180
           ILLALIEGAGIMLN+VMS      I+ ED  P+M AG P    G+  G PGQ        
Sbjct: 121 ILLALIEGAGIMLNKVMSAQQNMPIIIEDSVPAM-AGGP----GFPMGIPGQ-PQPHPQT 180

Query: 181 SEEVNQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
            +E +  GS  G +FGGWFG  GKKE +++SSSGS+  +LESFD P P+PNF+YK
Sbjct: 181 VQEASTSGSESGSWFGGWFG--GKKEPAAASSSGSKTEILESFDAP-PVPNFEYK 226
[Close]
BLAST of Spo12265.1 vs. NCBI nr
Match: gi|225445086|ref|XP_002283637.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Vitis vinifera])

HSP 1 Score: 271.9 bits (694), Expect = 1.000e-69
Identity = 144/234 (61.54%), Postives = 173/234 (73.93%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G  N+PKGER++   + VRM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPKGERVIGGSQAVRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R GG FAVWGGLFS FDCT+VY+RQKEDPWNSI AGAATGGFLQ+RQGL AS RSA FGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIIAGAATGGFLQMRQGLAASTRSAIFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQI--MYEDPSMGAGAPQQMGGYGFG-FPGQAANVGGGGS 180
           +LL LIEGAGIMLN+V+S P  +    E+P  G   P  + GY  G  PG         +
Sbjct: 121 VLLGLIEGAGIMLNKVLSAPQNLPMTMEEPVPGM-TPGPVSGYPMGQLPGMTPP-----A 180

Query: 181 EEVNQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
               +  SG   +FGG FGG  K+E   +++SGS+  +LESFDTPTPMP+F+YK
Sbjct: 181 PPAPEPSSGSSSWFGGLFGGGKKQE--PAANSGSKTEILESFDTPTPMPSFEYK 226
[Close]
BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLQ9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205600 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.700e-95
Identity = 189/243 (77.78%), Postives = 206/243 (84.77%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGAVGGS+FH+++GS N+PKGER+L   +T+RM+AP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSIFHFIKGSANSPKGERLLGGAQTMRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDC +VY RQKEDPWNSIFAGAATGGFLQ+RQGL+AS RSAAFGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCAMVYARQKEDPWNSIFAGAATGGFLQMRQGLKASSRSAAFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMG----AGAPQQMGGYGFGFPGQ--AANVGG 180
           ILLALIEGAGIMLNRVMSPP QIMYEDP+M      G    MG  GFG PGQ  A +  G
Sbjct: 121 ILLALIEGAGIMLNRVMSPPPQIMYEDPNMAGVGMGGQHAPMGNAGFGIPGQMKAPSNIG 180

Query: 181 GGSEEVNQGGSGGG---GFFGGWF--GGDGKKEG-SSSSSSGSEATVLESFDTPTPMPNF 232
           GGSEEVN GGS GG   GFFGGWF  GGDGKKEG +SSS  GSEA VLESFD+PTPMPNF
Sbjct: 181 GGSEEVNHGGSAGGAGSGFFGGWFGGGGDGKKEGKTSSSGGGSEAKVLESFDSPTPMPNF 240
[Close]
BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QT95_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_144160 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.800e-94
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG 175
           ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG
Sbjct: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGG 174
[Close]
BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSK3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146150 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.400e-89
Identity = 169/177 (95.48%), Postives = 172/177 (97.18%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDDLGGAFAMGA+GGSVFHYVRGSINAPKGERILRALETVRMSAP
Sbjct: 1   MGTPETSREPCPDRILDDLGGAFAMGAIGGSVFHYVRGSINAPKGERILRALETVRMSAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGGGFAVWGGLFSTFDCT+VYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSA FGG
Sbjct: 61  RTGGGFAVWGGLFSTFDCTMVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAVFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQA---ANVGG 175
           ILLALIEGAGIMLNRV+SPPAQIMYEDPSMGAGAPQ MGGYGFGFPGQA   ANVGG
Sbjct: 121 ILLALIEGAGIMLNRVVSPPAQIMYEDPSMGAGAPQ-MGGYGFGFPGQARAPANVGG 176
[Close]
BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Match: A0A067KNE2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07366 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.100e-70
Identity = 152/235 (64.68%), Postives = 178/235 (75.74%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G  N+P G R++   + VRM+AP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGIYNSPSGARLIGGTQAVRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R GG FAVWGGLFS FDCT+VY+RQKEDPWNSIFAGAATGGFL +RQGL AS RSA FGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYVRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQ--IMYED--PSMGAGAPQQMGGYGFGFPGQAANVGGGG 180
           ILLALIEGAGIMLN+VMS      I+ ED  P+M AG P    G+  G PGQ        
Sbjct: 121 ILLALIEGAGIMLNKVMSAQQNMPIIIEDSVPAM-AGGP----GFPMGIPGQ-PQPHPQT 180

Query: 181 SEEVNQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
            +E +  GS  G +FGGWFG  GKKE +++SSSGS+  +LESFD P P+PNF+YK
Sbjct: 181 VQEASTSGSESGSWFGGWFG--GKKEPAAASSSGSKTEILESFDAP-PVPNFEYK 226
[Close]
BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Match: A0A067FGU6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0273162mg PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 7.000e-70
Identity = 145/238 (60.92%), Postives = 173/238 (72.69%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G  N+P G R+L   + VRM+AP
Sbjct: 1   MGTPETSREPCPDRILDDVGGAFGMGAVGGSAFHFLKGIYNSPSGTRLLGGTQAVRMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R GG FAVWGGLFSTFDC++VY+RQKEDPWNSIFAGAATGGFL +RQGL AS RSA FGG
Sbjct: 61  RVGGSFAVWGGLFSTFDCSMVYLRQKEDPWNSIFAGAATGGFLSMRQGLGASARSAVFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQ--IMYEDPS-----MGAGAPQQMGGYGFGFPGQAANVG 180
           +LLALIEGAGIMLN+V+S P    IM ++P      +G G P    G   G PG    V 
Sbjct: 121 VLLALIEGAGIMLNKVLSGPQNMPIMIDEPEPVPGMVGGGPP----GIPAGLPGNPVQVA 180

Query: 181 GGGSEEVNQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
             GS + +        +FGGWFGG  KKE   ++S GS+  +LESFD P P+P+F+YK
Sbjct: 181 ESGSSDSDSS------WFGGWFGGGQKKE--PATSGGSKTEILESFDAP-PVPSFEYK 225
[Close]
BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Match: TI172_ARATH (Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 1.400e-66
Identity = 144/247 (58.30%), Postives = 169/247 (68.42%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G+ N+PKG R +   ++V M+AP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGG FAVWGGLFSTFDCT+VY+RQKEDPWNSI AGAATGGFL +RQG  A+ RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGF-GFPGQAANVGGGG--- 180
           +LLALIEGAGIMLN+V++ P  +M EDP M  G P   G  G  G PG     G  G   
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNMMMEDPGM-QGMPGMQGMQGMPGMPGMQGMPGMQGMQM 180

Query: 181 ----------SEEVNQGGSGGGGFFGGWFGG--DGKKEGSSSSSSGSEATVLESFDTPTP 232
                     SE  NQ  +        WFGG  D KKE      S S+  VLESFD P P
Sbjct: 181 GQMQSQAQIRSESQNQ-NTASSSSSSSWFGGLFDKKKE-EVQPGSESKTEVLESFDAP-P 240
[Close]
BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Match: TI171_ARATH (Mitochondrial import inner membrane translocase subunit TIM17-1 OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.400e-58
Identity = 124/231 (53.68%), Postives = 153/231 (66.23%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPE+SREPCPDRILDD+GGAFAMGAVGGS +H +RG  N+P G R+   ++ +RMS P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R+GG F+VWGGL+STFDC LVY RQKEDPWNSI +GAATGGFL +RQGL AS RSA  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGGGGSEEV 180
           +LLA+IEG GIMLN+V S      + +       P  MG       GQ+  V      E 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAATSLPYGMG----QISGQSVPV-----PET 180

Query: 181 NQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
           +   SG   +FG  F    KK+ +    S S   +LESFD P P+P +++K
Sbjct: 181 SSSSSGSVSWFGSLF---KKKKETEDHHSESRTHILESFDAP-PVPTYEFK 218
[Close]
BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Match: TI17A_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens GN=TIMM17A PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.900e-38
Identity = 82/150 (54.67%), Postives = 99/150 (66.00%), Query Frame = 1 

		  

Query: 5   ETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKG--ERILRALETVRMSAPRT 64
           E +REPCP RI+DD GGAF MG +GG +F  ++G  N+P G   R+  +L  ++  AP+ 
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQL 62

Query: 65  GGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGGIL 124
           GG FAVWGGLFS  DC++V +R KEDPWNSI +GA TG  L  R G  A   SAA GGIL
Sbjct: 63  GGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122

Query: 125 LALIEGAGIMLNRVMS---PPAQIMYEDPS 150
           LALIEGAGI+L R  S   P      EDPS
Sbjct: 123 LALIEGAGILLTRFASAQFPNGPQFAEDPS 152
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BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Match: TI17A_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus GN=Timm17a PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.700e-37
Identity = 79/136 (58.09%), Postives = 94/136 (69.12%), Query Frame = 1 

		  

Query: 5   ETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKG--ERILRALETVRMSAPRT 64
           E +REPCP RI+DD GGAF MG +GG +F   +G  N+P G   R+  +L  ++  AP+ 
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQL 62

Query: 65  GGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGGIL 124
           GG FAVWGGLFST DC++V IR KEDPWNSI +GA TG  L  R G  A   SAA GGIL
Sbjct: 63  GGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGIL 122

Query: 125 LALIEGAGIMLNRVMS 139
           LALIEGAGI+L R  S
Sbjct: 123 LALIEGAGILLTRFAS 138
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BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Match: TI17B_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus GN=Timm17b PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.300e-37
Identity = 84/150 (56.00%), Postives = 97/150 (64.67%), Query Frame = 1 

		  

Query: 5   ETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKG--ERILRALETVRMSAPRT 64
           E +REPCP RI+DD GGAF MG +GG VF  ++G  NAP G   R   ++  VR+ AP+ 
Sbjct: 3   EYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQI 62

Query: 65  GGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGGIL 124
           GG FAVWGGLFST DC LV +R KEDPWNSI +GA TG  L  R G  A   SA  GGIL
Sbjct: 63  GGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGIL 122

Query: 125 LALIEGAGIMLNRVMSPP---AQIMYEDPS 150
           LALIEG GI+L R  +     A    EDPS
Sbjct: 123 LALIEGVGILLTRYTAQQFRNAPPFLEDPS 152
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BLAST of Spo12265.1 vs. TAIR (Arabidopsis)
Match: AT2G37410.1 (translocase inner membrane subunit 17-2)

HSP 1 Score: 254.2 bits (648), Expect = 7.600e-68
Identity = 144/247 (58.30%), Postives = 169/247 (68.42%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPETSREPCPDRILDD+GGAF MGAVGGS FH+++G+ N+PKG R +   ++V M+AP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           RTGG FAVWGGLFSTFDCT+VY+RQKEDPWNSI AGAATGGFL +RQG  A+ RSA FGG
Sbjct: 61  RTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGF-GFPGQAANVGGGG--- 180
           +LLALIEGAGIMLN+V++ P  +M EDP M  G P   G  G  G PG     G  G   
Sbjct: 121 VLLALIEGAGIMLNKVLAQPQNMMMEDPGM-QGMPGMQGMQGMPGMPGMQGMPGMQGMQM 180

Query: 181 ----------SEEVNQGGSGGGGFFGGWFGG--DGKKEGSSSSSSGSEATVLESFDTPTP 232
                     SE  NQ  +        WFGG  D KKE      S S+  VLESFD P P
Sbjct: 181 GQMQSQAQIRSESQNQ-NTASSSSSSSWFGGLFDKKKE-EVQPGSESKTEVLESFDAP-P 240
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BLAST of Spo12265.1 vs. TAIR (Arabidopsis)
Match: AT1G20350.1 (translocase inner membrane subunit 17-1)

HSP 1 Score: 227.6 bits (579), Expect = 7.600e-60
Identity = 124/231 (53.68%), Postives = 153/231 (66.23%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           MGTPE+SREPCPDRILDD+GGAFAMGAVGGS +H +RG  N+P G R+   ++ +RMS P
Sbjct: 1   MGTPESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGARLSGGVQALRMSGP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R+GG F+VWGGL+STFDC LVY RQKEDPWNSI +GAATGGFL +RQGL AS RSA  GG
Sbjct: 61  RSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGG 120

Query: 121 ILLALIEGAGIMLNRVMSPPAQIMYEDPSMGAGAPQQMGGYGFGFPGQAANVGGGGSEEV 180
           +LLA+IEG GIMLN+V S      + +       P  MG       GQ+  V      E 
Sbjct: 121 VLLAMIEGVGIMLNKVQSTAHNEQFMEDHAATSLPYGMG----QISGQSVPV-----PET 180

Query: 181 NQGGSGGGGFFGGWFGGDGKKEGSSSSSSGSEATVLESFDTPTPMPNFDYK 232
           +   SG   +FG  F    KK+ +    S S   +LESFD P P+P +++K
Sbjct: 181 SSSSSGSVSWFGSLF---KKKKETEDHHSESRTHILESFDAP-PVPTYEFK 218
[Close]
BLAST of Spo12265.1 vs. TAIR (Arabidopsis)
Match: AT5G11690.1 (translocase inner membrane subunit 17-3)

HSP 1 Score: 135.2 bits (339), Expect = 5.200e-32
Identity = 68/126 (53.97%), Postives = 88/126 (69.84%), Query Frame = 1 

		  

Query: 1   MGTPETSREPCPDRILDDLGGAFAMGAVGGSVFHYVRGSINAPKGERILRALETVRMSAP 60
           M T + S+E    RI++ +G AF  GAVGGSV+H+VRG+ N+P G R +   +   M+AP
Sbjct: 1   MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGARYVGGTQAASMNAP 60

Query: 61  RTGGGFAVWGGLFSTFDCTLVYIRQKEDPWNSIFAGAATGGFLQVRQGLRASGRSAAFGG 120
           R GG FAV+GGL STFD  LV IR+KEDPWNSI AGAATGG L +R+G+ A+  SA   G
Sbjct: 61  RLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFG 120

Query: 121 ILLALI 127
             LA++
Sbjct: 121 FFLAVL 126
The following BLAST results are available for this feature:
BLAST of Spo12265.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731355407|ref|XP_010689124.1|5.3e-9577.7PREDICTED: mitochondrial impor... [more]
gi|902185286|gb|KNA10470.1|2.6e-94100.hypothetical protein SOVF_1441... [more]
gi|902184119|gb|KNA10244.1|1.9e-8995.4hypothetical protein SOVF_1461... [more]
gi|802627893|ref|XP_012076870.1|1.5e-7064.6PREDICTED: mitochondrial impor... [more]
gi|225445086|ref|XP_002283637.1|1.0e-6961.5PREDICTED: mitochondrial impor... [more]
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BLAST of Spo12265.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8BLQ9_BETVU3.7e-9577.7Uncharacterized protein OS=Bet... [more]
A0A0K9QT95_SPIOL1.8e-94100.Uncharacterized protein OS=Spi... [more]
A0A0K9QSK3_SPIOL1.4e-8995.4Uncharacterized protein OS=Spi... [more]
A0A067KNE2_JATCU1.1e-7064.6Uncharacterized protein OS=Jat... [more]
A0A067FGU6_CITSI7.0e-7060.9Uncharacterized protein OS=Cit... [more]
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BLAST of Spo12265.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TI172_ARATH1.4e-6658.3Mitochondrial import inner mem... [more]
TI171_ARATH1.4e-5853.6Mitochondrial import inner mem... [more]
TI17A_HUMAN5.9e-3854.6Mitochondrial import inner mem... [more]
TI17A_MOUSE1.7e-3758.0Mitochondrial import inner mem... [more]
TI17B_MOUSE2.3e-3756.0Mitochondrial import inner mem... [more]
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BLAST of Spo12265.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G37410.17.6e-6858.3translocase inner membrane sub... [more]
AT1G20350.17.6e-6053.6translocase inner membrane sub... [more]
AT5G11690.15.2e-3253.9translocase inner membrane sub... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003397Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24PFAMPF02466Tim17coord: 16..122
score: 1.8
IPR005678Mitochondrial inner membrane translocase complex, subunit Tim17PANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 1..231
score: 2.0E
NoneNo IPR availablePANTHERPTHR10485:SF0AT05822P-RELATEDcoord: 1..231
score: 2.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042545 cell wall modification
biological_process GO:0009987 cellular process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0001510 RNA methylation
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0009507 chloroplast
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0044425 membrane part
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression