Spo12343 (gene) | SpinachBase

Overview


Name	Spo12343
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Resistance to phytophthora 1 protein
Location	chr5 : 26091579 .. 26099647 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTAAGATATTTTTTTTTTTTAAGAAATTAGCCATTTGTAAAGATTTTCTTTGCCTTATCCATTTTCTTTGCATATTTTCCATTGCCGTGCTCTCCAGATAAATTAAAAAAAAATCAAAAAATACAAATTCAAAGAAAGATGACAGTATTGTTACCAGCTTCACCCTTCAGCCGCCATTTCTGCAACCCTCCTTCCATTCGATATTCATTTTCACATAAAACTTCAATTTGTTTAAGTTTTCCGCCATTAAAGGGTAGCTTCAGAATCCATGGAAGCTCTGATAAACTCGACACACCAATAACTATGGACGAACAAGACCAACAACAGCAAAATTTGGAAATTAACAAATTAGAGGAGAGAGAAAATAATACTTCTTCCACTTCTACTTCTGCTCCAGCAATTGAGAAAGACCTCAAAAAGGTAAGTTCCTTGTAAATTTCCTATGTTATTTGTTTGTAAATTTCCTATGTTATGTCTTGCTAATTGTAGAAAATTTTGTTTAATTGGGTTAATCCAGTATTTGTTTTGAAATAAGCAAATGTTGTAAGTTATAGCTTACTATTATTGTGATTGCGACTGGTAAATCAGGCGGGAGAAATTAGGGTTTGATGTGAATTATTTGGGGATTGAATGAATTGGGTTTAATCAAATCCTTAGAGTTTTCTGTGACGGAGTGAATTTTGGAAATTTGCAATGGAGACACATGTTATTGCTCTTCCTAAATGGTTGAATGTATAAAGATTGTATTGATCGATTAATCGAATTAGTGTTCCTGCTCATGGTTGGAGTCTGGATAACTTCGGGCTGATTACACCGAAATTGACGCCGAAGGTACGAGCATTGGTTGTCAAAAGGGTAGAGATAACATGCAGCTAGAAATTATTTTATCAAAGAAGAATAAAAATCCAAAAATTTATCAGGAATAGGCTGAGTGGGTGAGTGTTTATTGCTATAGTGAGGGTAATCAAATGAAATTTGGGAATTTTGAAGCGAGTACTCTCGACAGTTTCCTCTGCTTGATTTAATTATAAAACCTACATTTCAGGAACGACCAGGACTCGGGAAGGGGGGTGTCTTTAGTGTGTGGAATTTAAGTGATAGTTCAGTAGGAACACTTGACAAGAAGGGGGTGAATTGTTTCTTGGTAACTTGGGTAAGTTTCTTGTGAAATTTTCACAATAAAGAGAATGAGAACAATAAGCGAAGAGAGATATAAAACGGAGGAACCTTCTTGATCCTAATCAAGAAGAAACTTATTACTCTTTTGTATTAATGCAATAACTCTATTACAAATACACTCTTTAACTCGAGTTCCTCTCGAACACGAGTTCCCCACAGCAATCCCCTTTGATTACTGTGCTCCTCTATCTCTCTCTGACTTAACTCTAAGTCGCTTCTTTTCTCTTTGACTTAACTCTAAGTCGCTTTTTTTTCTCTTTGCCTTAACTCTAAGTCAATTAAGGATCACTCAACCCTTAAACCCAAAATACAATTTGATACTTCCTCCATTTTTTTTAATTGCACCATCTTGGATTTCTCGCTTGCCATGCACTATTTTAACTACTAATATCTCTCATTATACATTTTAAAAAATTATAAAAATTTGATAATTTGAAAGTATATTTCGAGACGAATCTAACAAGATCCCACATGAGTATATTTTTCCTTACATATAAATCACAAAAAATAACTATATAAGAATAAGCGAATAGTGCTAAAACCAAGATGGTGCAATTATAAAAAAATGGAGGAAGTATAAAACTCTAGTACGTAATAAAGCTTAAAGTAATAAGGAACTCAAGGGACACTCTTTTGAAAACTGATTCTCTTTAAAACGTTTAAGCTCTTAAGATATATTTTGCAAAGATCTGTTGTGTATTTTGAAAAGCAAAAACTCTTCTCNCACTCTTTTGAAAACTGATTCTCTTTAAAACGTTTAAGCTCTTAAGATATATTTTGCAAAGATCTGTTGTGTATTTTGAAAAGCAAAAACTCTTCTCCTTTTATAGGAGAGTTTTACCTAGGGTTGGGTGCCATGTTCTCCTCAACTACCCACTAACCGTTACTGCTCAGTAACATGAGCATAGTTGGAGAGAAACAGGGGAGACCAAATCAAAACATTAAATGCACGTTTAAACAGAAATACGTGGGAGCGTTTTAAGGAACATGGAAAATCTTTTGCTTGAGAAACAAGGAGAATAAAATCAGAATCCTATGTTTACATTTATTAATTATATTCATTTTATTTATTAAAAAGATTTTCCAAGTTAAAACTCTTTTATAATTACAGTTAATATATTTCATTTAAAACGTACCAAAATACTATGTCTCTTTCATTCCAAATTACGTTTAAACTTTATNTATTTCATTTAAAACGTACCAAAATACTATGTCTCTTTCATTCCAAATTACGTTTAAACTTTATTAAATACTTACCTAAATCCTAAAACATAAACTCATATGTTGTAGTCTTCATGTTGCACCTTTAGAAGCTTCACTCAAAGTCTTCCCAATTTGTTCATTCTCTGGAACGTCGAGGATCCACATAATATATGAGGATCTCGCCTTAGGAACTCGCCTAAGGATCTCGCCTTTGTAAACTTGCTTAATGATTATTTCTTCAATGTAGTGTCTGACATGAATCAATTACTTGCTTATATTTCACGTTGCTTAGTTTATCCAACTCAGGATCTCCTTAACTTAGCATTATCCCTCTAAGGATCTCGGAACCTATTATGCAACTTAACTTAACCAATTGTCAGGAGTTTGCTTTGTCATCATCAAAACTTTAGGATCAACATTAAGTTTGTACGGTTGGAATTTCTTGCCTTCTTGGGATGAAGGGGAGTGACCTTATATTGAATGGTCTTGTTGTACGGTTTTGAAGATGAATGTGAATTTCTCTTTGGTGTGTGTAAGAAACAAAAATGGAAAATTTCGACAGGTTTGTTGCTTCGAAAAAATGGAGTATACTAGTTGTAGAAGGGTATTTGTGAAAGTCTTGGACTAGTGGTAAGTGCAAAGTTACATTCCCCACTGCGTGGTTGAACTTTCTGGGTTATGGGGTCCTTTGGTGAAATGCAAATGCAGTTGTAAGGTCGGGTTTGTTGTTTTTAGTGTTGTCGCATGGTCTCCTTGGTTAGCTAGAAACAAGCTTTGGTTCAGGGGGAGAGACTTGCAGGAGAATTTTATCAGCTTCAGATAAGATGCTTTTGGTGGCTTAGAGGAGCTTGTAACCTATTTGTTGTCAGTATTTATGTCTAACAAAGCTCTCTTCTGCTATTTCTCCGTCTCTGAGTAGTCAGCAAGGGTTGTTAATATAAACAGGGCTAAGGAATGGGGATAATGATCATATTGGTAGTCTAACTTTTGCCTTATTGGCTGCAAGAAAACTATCTATAGTGTGCAAGATCTTTGTAAGAAAATGGATTTGAACTTTGTGCAGCCAAAAAAAGAAACTTTAAAGCCCTGCCCCAGGTTTAACTCTCAGAAATAATTTGTTTGTTTTTTCCAAATGGGGGGGGNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTGATGATCATGATTGCTCTATATCCCTTTTTAACATTCATAGCAGCAGGGATCTGATTTGGTCAGTTCTCCACTTTAACAACAATTGATCAAATTCTATTTAGTCTAATGCATAGTGATAATTTATCCGACAATGACTTAGGTAGTCAAACACTCACACTTGCTAATGATTTGGGCCTTTGGCTTTAGGATAAGGATTGACCAAATAGGATTCTTGTTATCTGACATTCTTTTTTATCCCTCCTCATAAAGACATTGCATAATTTTGATCTTGTCTATCCCGCCTTATGAAAAAATCTTGTTGAAGGTGTTAAGGCATATTGGCAACGGAAATGCTAAATGTCATTTACAGCTCAATTCCTGATGACTGATTTGAACTGCTTTTCCCCTTTCCATCTTTGTCTGGGAGACAAACAATTTTCCATGATGCATGATATCCTATTCATTGTGCAAAAAAAGTTCTTGTCATGATGATTTATTTCGTGTTCAATCAGGTAGTTAACAAGGCAGCTGCAACCTTTGCTCCTAGGGCTTCTACAGCTTCCAAAAACCCTGCTGTGCCAGGAAGTACATTATACCAAGTTTTTGAGATCCAGGCATATGCGTCTATGTTTCTGGGCGGAGTTCTGTCCTTTAATCTAGTATTCCCATCAAATGAGCCAGATATATGGCGATTAATGGGCATGTGGTCTATTTGGATGTTCAGTAAGTCCTCGTCTCACTATGATAGTAGAAGTAAACTTCTTTTATTATATTTCTTGGTTGTCCTAAAGACTATACAAGGATCATGAGGGAAGAACCAAAAGTTGTGGAAGAAAGAGATATTAGGAGGGAACGATGAACAAACTTTTTAGGCCCATGAACGTTGGTGCTCTTAAGAACAATTCACATCACTTTGTAGCTTTCACACATGTTGGCATTTATTTCGTGTCACACTAATCTAGTTCAAATAGCTATAGTTAGGTACTTGGGTTAATGTGTCCTTGAGATTTGTGGATATGTGGCTAATTGCTCTTTGCAATTAGGATGTTAAAGAACACTGCATGAGCTTAACAAGTCATTTGAGCACAAAAACAATAATATGCCACTAAGCCTGTCGATTTGCACTATGCTATTTCCACCAATTATGCATATCTTGGTATGAAGCTTTGATTAAAATCATTTGCGTGTTCAATTGACTTCATGGAGTTGTTTAGAACTTAGCAGATTCAAGTATGTGTATGTGTGTGTATGCGCGTGTGTGTATGCGCGTGTGTGTTGGACACAAGTATTGGATCCGACCATCCAAGTCCTTGATACACCGGTATCTAGGACACAAGTATTGGATCCGACCATCTGAGTCCTCGATACTCCGGTATCTCGGACACAAGTATTGGGTCCGAGTAACTTAGGATCTTTGTATCCTTCGATTCCTTAGTCAGGAATGCTAGTGTAACTCTAATTTCTTGTTGTTAACATACGCACCATTTTTATTCTTATATTGTTATGTTCATCTCACTGAATAATAAACCTTAAATATATTTTCCCTGGTGCAGCAATTCCTTCACTTCGTGCCCGAGACTGTTCAAAGAACGAAAAAGAAGCACTCAACTATCTGTTTCTCCTTGTTCCATTGCTCAATGTCATAATCCCATTCTTCTGGAAGTCCTTTGCTGTTGTTTGGTCCGCAGACACAGTTGCCTTCTTTTTGATGTACGCTTGGAAGGTATGTCTCATTTCTGTAGATTTCAATAATTAGCAATCTGAGGCAATTTATTGATACACTATTTCTGCTTCATACAGTTGGGGTGGCTGCAGAAAACAGAGTCGTAAGGTTGCCATCATGGGTTCTCTTGGTGAAAGTCTTTCCTGTAGAAATATTATTTTTTATCTGAATAATTGATATTATTACACACAATATGTACAAAACTTCCAATGATGCTGGAAACTCTAGGGGAGGATCAGGAAAGACCGAAATGCTTAGAAGGCGAAGTTAACAAACAGACAGTCTTTGATTGGTTATAGCAAATTAAAATGTAAATTCCTGTATTTGGTTCGAGTAGTGCGCCACAGACAGCACTTGCAGCTTGCATATCAAAAATTCATAGGCATCGAACCCGTGTACATTCTGGTAACCTTAAAGTCAGAAGCTTGAATCCTACCAACTGCAACTGTTGTGGTTATCTCAAGAGTCTGCCTTGCAAATCCAGGTTTCACATTTTTCCTTCTATCTTACTGCGTATATTCATTTTTTGTCTCGCTGCATGTTCAAAAGCTTGAATGTAACCGTTATGAATAAATTCGTAATCTGTAATAGGTACTGTTATAGGAAGTATATTTTATGAATTCCTTCACTTAGATCGATATACATAACACATTACAAACCTAAATTAATGAACAGGAGGGTAGATTGCCTGAACATGAAATACATGTGTCGGAATTTATTTTTGAAATGTATGAATGAATAGAGAGAAGCAAACAAGTGTAGATTGCCTGAAGTTATAGTACATGAGCAGTTTGTTTGCTTCAGTCATGCCATAGTTATTCTTGGTGCATATTCTATACAACACATACGCATAGGCATTTAGGTTCTGTTTGGTTTGCCGTAAAACTTTACAGTGTAATTTTTTCATGGAATTTTTTTTTCCAGGTAAAAGCACAATTCAAAATTACTTTTCCTTTGTTTGGTTCCTTAACAGAACATTAATGGGAAAATAAAAATGTGAGAATATTGATGGAAAGAAGTAAGATAGAAAAGGAGGAAAAATGAAAAAGGTGGTTTTCATTCTTTTCAAATGGAAACTATTTTTCACACTTGAGACACTTATTGAAAATTGTTTTTCATCACTTGCCAGACCAAACATATGATTAAAAAGGGAAAAAATATTTTACACTCTATTAAACGGGGCCTTACGTTGATTCGGAATCTTGATACGTAGTGAAAATCCTTGATAAACGGCCCTATGACTTAGTTCCAGGTTTTGTGACATAAAAGAAAATACTTTCCTTTAGAAAAACAATTGTATTAGATCGTAAAACCACAATTATATGTAAAAAAATAAAATATTACATCGACTACAATGGAAATAATGAAAACATCCCTCAAAACAAAGAAAGTGGAAATATGAAAACATCATGCAAAGAAATATTTCCGACTAGAGTGTTGTCGTCGTTAGTGCTCTTTCCTTGCTCGAACGTATGTCCCTATGTACCGAAAACTGACCAGGCTGACTTGAATGCAATAAGGAAACCCGGCCCGTTGATTTAACTAATAAGCTTGTAGTTATTAATATTTAGAGGTTCTCTTATGAAGCTTTGAAGCAGTTAGAATAATGAGCAAGAGAAATGCAATAGCCCCCATTAAAGAAAGGGCAACAGAAGCCGTAACTTGGTGGCAAAATTTAGCATACATATTACAAATCTTTTTCCATTGTAAATGTGAGTTTCCTTTTATACCTATTAGCCCGATTGCACCCGTTCCTCCGATGCTGGAAAACAACAACGCAACCATCATTAAATCTGCAACCAATATCATCAAACGCGAAACACCCACTTTTCCACCTCCTTTACTTGCAAATATCATAACTAGCATTGTTGCTGCTGCGGATACACTTGCGATGGAGTTCGACACCACAGAGTACCTATTTTAATTATAATAATAAAAAAAATCAATACAAACAGCCGGTCAAATAAACCAAGTGAATTGATTCATTGATTTGAAGGTAAATGAAATACTTACACAAAAGCAGAGACATGATGGAATTTAGCAGTGACGGGGACATGGAAAGTAGGAAGAGTAGGAAGTAGTACAACAGGAATAATCTCGGTCTCTTTGTCCAACCCTATCAAAATAGCAGCTGTTAGAGTCACTAACAAGGCAAAACCCCTTAACATAATCTCGGGCTGGCTGAACGCAGTGCCATGATCTGTTTCCCATTCTTTCTCTTTGTTTTTCTGCACCTCTCCTATCTCCATATTATTCTGCTTTTAGGCGCTTTGTTATTGACGTAATAGACTGTAGAGTGTCCTTAAAATACTTGAACATTTTGTTGCAAGTAGCTACCGGAAAGCACTAGAGAATAATAGCTTAGTTGGCGCTGTTAATATGGCAGTTGAAATTCTACAATAAACTAAATAATACAGTTGGATGATTAAAGTGGGAAAACGGCACAACGGTGGTTTGTATTGAATACAGAAGACAAGAGGTGAAGGGAGTTCAACAAAATGGGTCTACTTGTAGTAAATACAAATTGGTTGAGGAAATGGTGTAGCTAGTTTTAGTTGTGTGTGTGGGTGGATTTATGAATTTTTTTATTATTGGAATGATTTTAGAACACTACTTATGGTACAGGATCGACCACGAATACATAGCTAGTTATGGTATAGACTCTATCGTGTTTTTTATCAACGTGTTACGTACGTTATCAAAATATAGTATGTAGGTCAAATAAATTAAAAACAAACATCAATGAGGTGTTCAAGTAATGGACTAATGGTTGAATAATAACTTGTGCG

mRNA sequence

TTGTAAGATATTTTTTTTTTTTAAGAAATTAGCCATTTGTAAAGATTTTCTTTGCCTTATCCATTTTCTTTGCATATTTTCCATTGCCGTGCTCTCCAGATAAATTAAAAAAAAATCAAAAAATACAAATTCAAAGAAAGATGACAGTATTGTTACCAGCTTCACCCTTCAGCCGCCATTTCTGCAACCCTCCTTCCATTCGATATTCATTTTCACATAAAACTTCAATTTGTTTAAGTTTTCCGCCATTAAAGGGTAGCTTCAGAATCCATGGAAGCTCTGATAAACTCGACACACCAATAACTATGGACGAACAAGACCAACAACAGCAAAATTTGGAAATTAACAAATTAGAGGAGAGAGAAAATAATACTTCTTCCACTTCTACTTCTGCTCCAGCAATTGAGAAAGACCTCAAAAAGGTAGTTAACAAGGCAGCTGCAACCTTTGCTCCTAGGGCTTCTACAGCTTCCAAAAACCCTGCTGTGCCAGGAAGTACATTATACCAAGTTTTTGAGATCCAGGCATATGCGTCTATGTTTCTGGGCGGAGTTCTGTCCTTTAATCTAGTATTCCCATCAAATGAGCCAGATATATGGCGATTAATGGGCATGTGGTCTATTTGGATGTTCACAATTCCTTCACTTCGTGCCCGAGACTGTTCAAAGAACGAAAAAGAAGCACTCAACTATCTGTTTCTCCTTGTTCCATTGCTCAATGTCATAATCCCATTCTTCTGGAAGTCCTTTGCTGTTGTTTGGTCCGCAGACACAGTTGCCTTCTTTTTGATGTACGCTTGGAAGTTGGGGTGGCTGCAGAAAACAGAGTCGTAAGGTTGCCATCATGGGTTCTCTTGGTGAAAGTCTTTCCTGTAGAAATATTATTTTTTATCTGAATAATTGATATTATTACACACAATATGTACAAAACTTCCAATGATGCTGGAAACTCTAGGGGAGGATCAGGAAAGACCGAAATGCTTAGAAGGCGAAGTTAACAAACAGACAGTCTTTGATTGGTTATAGCAAATTAAAATGTAAATTCCTGTATTTGGTTCGAGTAGTGCGCCACAGACAGCACTTGCAGCTTGCATATCAAAAATTCATAGGCATCGAACCCGTGTACATTCTGGTAACCTTAAAGTCAGAAGCTTGAATCCTACCAACTGCAACTGTTGTGGTTATCTCAAGAGTCTGCCTTGCAAATCCAGGTTTCACATTTTTCCTTCTATCTTACTGCGTATATTCATTTTTTGTCTCGCTGCATGTTCAAAAGCTTGAATGTAACCGTTATGAATAAATTCGTAATCTGTAATAGGTACTGTTATAGGAAGTATATTTTATGAATTCCTTCACTTAGATCGATATACATAACACATTACAAACCTAAATTAATGAACAGGAGGGTAGATTGCCTGAACATGAAATACATGTGTCGGAATTTATTTTTGAAATGTATGAATGAATAGAGAGAAGCAAACAAGTGTAGATTGCCTGAAGTTATAGTACATGAGCAGTTTGTTTGCTTCAGTCATGCCATAGTTATTCTTGGTGCATATTCTATACAACACATACGCATAGGCATTTAGGTTCTGTTTGGTTTGCCGTAAAACTTTACAGTGTAATTTTTTCATGGAATTTTTTTTTCCAGGTAAAAGCACAATTCAAAATTACTTTTCCTTTGTTTGGTTCCTTAACAGAACATTAATGGGAAAATAAAAATGTGAGAATATTGATGGAAAGAAGTAAGATAGAAAAGGAGGAAAAATGAAAAAGGTGGTTTTCATTCTTTTCAAATGGAAACTATTTTTCACACTTGAGACACTTATTGAAAATTGTTTTTCATCACTTGCCAGACCAAACATATGATTAAAAAGGGAAAAAATATTTTACACTCTATTAAACGGGGCCTTACGTTGATTCGGAATCTTGATACGTAGTGAAAATCCTTGATAAACGGCCCTATGACTTAGTTCCAGGTTTTGTGACATAAAAGAAAATACTTTCCTTTAGAAAAACAATTGTATTAGATCGTAAAACCACAATTATATGTAAAAAAATAAAATATTACATCGACTACAATGGAAATAATGAAAACATCCCTCAAAACAAAGAAAGTGGAAATATGAAAACATCATGCAAAGAAATATTTCCGACTAGAGTGTTGTCGTCGTTAGTGCTCTTTCCTTGCTCGAACGTATGTCCCTATGTACCGAAAACTGACCAGGCTGACTTGAATGCAATAAGGAAACCCGGCCCGTTGATTTAACTAATAAGCTTGTAGTTATTAATATTTAGAGGTTCTCTTATGAAGCTTTGAAGCAGTTAGAATAATGAGCAAGAGAAATGCAATAGCCCCCATTAAAGAAAGGGCAACAGAAGCCGTAACTTGGTGGCAAAATTTAGCATACATATTACAAATCTTTTTCCATTGTAAATGTGAGTTTCCTTTTATACCTATTAGCCCGATTGCACCCGTTCCTCCGATGCTGGAAAACAACAACGCAACCATCATTAAATCTGCAACCAATATCATCAAACGCGAAACACCCACTTTTCCACCTCCTTTACTTGCAAATATCATAACTAGCATTGTTGCTGCTGCGGATACACTTGCGATGGAGTTCGACACCACAGAGTACCTATTTTAATTATAATAATAAAAAAAATCAATACAAACAGCCGGTCAAATAAACCAAGTGAATTGATTCATTGATTTGAAGGTAAATGAAATACTTACACAAAAGCAGAGACATGATGGAATTTAGCAGTGACGGGGACATGGAAAGTAGGAAGAGTAGGAAGTAGTACAACAGGAATAATCTCGGTCTCTTTGTCCAACCCTATCAAAATAGCAGCTGTTAGAGTCACTAACAAGGCAAAACCCCTTAACATAATCTCGGGCTGGCTGAACGCAGTGCCATGATCTGTTTCCCATTCTTTCTCTTTGTTTTTCTGCACCTCTCCTATCTCCATATTATTCTGCTTTTAGGCGCTTTGTTATTGACGTAATAGACTGTAGAGTGTCCTTAAAATACTTGAACATTTTGTTGCAAGTAGCTACCGGAAAGCACTAGAGAATAATAGCTTAGTTGGCGCTGTTAATATGGCAGTTGAAATTCTACAATAAACTAAATAATACAGTTGGATGATTAAAGTGGGAAAACGGCACAACGGTGGTTTGTATTGAATACAGAAGACAAGAGGTGAAGGGAGTTCAACAAAATGGGTCTACTTGTAGTAAATACAAATTGGTTGAGGAAATGGTGTAGCTAGTTTTAGTTGTGTGTGTGGGTGGATTTATGAATTTTTTTATTATTGGAATGATTTTAGAACACTACTTATGGTACAGGATCGACCACGAATACATAGCTAGTTATGGTATAGACTCTATCGTGTTTTTTATCAACGTGTTACGTACGTTATCAAAATATAGTATGTAGGTCAAATAAATTAAAAACAAACATCAATGAGGTGTTCAAGTAATGGACTAATGGTTGAATAATAACTTGTGCG

Coding sequence (CDS)

ATGACAGTATTGTTACCAGCTTCACCCTTCAGCCGCCATTTCTGCAACCCTCCTTCCATTCGATATTCATTTTCACATAAAACTTCAATTTGTTTAAGTTTTCCGCCATTAAAGGGTAGCTTCAGAATCCATGGAAGCTCTGATAAACTCGACACACCAATAACTATGGACGAACAAGACCAACAACAGCAAAATTTGGAAATTAACAAATTAGAGGAGAGAGAAAATAATACTTCTTCCACTTCTACTTCTGCTCCAGCAATTGAGAAAGACCTCAAAAAGGTAGTTAACAAGGCAGCTGCAACCTTTGCTCCTAGGGCTTCTACAGCTTCCAAAAACCCTGCTGTGCCAGGAAGTACATTATACCAAGTTTTTGAGATCCAGGCATATGCGTCTATGTTTCTGGGCGGAGTTCTGTCCTTTAATCTAGTATTCCCATCAAATGAGCCAGATATATGGCGATTAATGGGCATGTGGTCTATTTGGATGTTCACAATTCCTTCACTTCGTGCCCGAGACTGTTCAAAGAACGAAAAAGAAGCACTCAACTATCTGTTTCTCCTTGTTCCATTGCTCAATGTCATAATCCCATTCTTCTGGAAGTCCTTTGCTGTTGTTTGGTCCGCAGACACAGTTGCCTTCTTTTTGATGTACGCTTGGAAGTTGGGGTGGCTGCAGAAAACAGAGTCGTAA

Protein sequence

MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQDQQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGSTLYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12343.1	Spo12343.1	mRNA

Homology

[Close]

BLAST of Spo12343.1 vs. NCBI nr
Match: gi|902232324|gb|KNA22557.1| (hypothetical protein SOVF_032860 [Spinacia oleracea])

HSP 1 Score: 458.4 bits (1178), Expect = 7.500e-126
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD
Sbjct: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60

Query: 61  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120
           QQQQNLEINKLEERENNT STSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST
Sbjct: 61  QQQQNLEINKLEERENNTPSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120

Query: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180
           LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE
Sbjct: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180

Query: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES 231
           ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES
Sbjct: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES 230

[Close]

BLAST of Spo12343.1 vs. NCBI nr
Match: gi|731344722|ref|XP_010683572.1| (PREDICTED: uncharacterized protein LOC104898223 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 369.8 bits (948), Expect = 3.500e-99
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           MTVLLPAS FS HFCN PS++YSFS KTS   S  PLKG FRIHGSSDKLDTPITM+   
Sbjct: 1   MTVLLPASLFSCHFCNLPSVKYSFSQKTSF--SSLPLKGCFRIHGSSDKLDTPITMEVN- 60

Query: 61  QQQQNLEINKLEERENNTS-STSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGS 120
             ++++++  LEEREN    S+ST+APA+EKDLKKVVNKAAATFAPRASTASKNPAVPGS
Sbjct: 61  -VEEDMQVTNLEERENEIRVSSSTAAPAMEKDLKKVVNKAAATFAPRASTASKNPAVPGS 120

Query: 121 TLYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEK 180
           TLY VFE+QAYASM LGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCS  EK
Sbjct: 121 TLYTVFEVQAYASMLLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSSKEK 180

Query: 181 EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE
Sbjct: 181 EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 226

[Close]

BLAST of Spo12343.1 vs. NCBI nr
Match: gi|449462284|ref|XP_004148871.1| (PREDICTED: uncharacterized protein LOC101218251 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 3.900e-74
Identity = 152/229 (66.38%), Postives = 176/229 (76.86%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           M  L+P SP +  FC  PS    F H+T+  L    +K S R+  +S+ L T   ++E  
Sbjct: 1   MNTLIPTSPCN--FCYIPSF---FPHRTAFSLELSAIKFSHRLRANSNDLQTQ-AVEEPK 60

Query: 61  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120
           +++  +        E    + ++SAPA++KDLKKVV K AATFAPRASTASKNPAVPG+T
Sbjct: 61  EEENGIAA------EPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTASKNPAVPGTT 120

Query: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180
           LY VFE+Q YASM LGGVLSFNL+FPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE
Sbjct: 121 LYTVFEVQGYASMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180

Query: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLLVPLLNVIIPFF KSFAVVWSADTVAFF MYAWKLGW Q+T+
Sbjct: 181 ALNYLFLLVPLLNVIIPFFLKSFAVVWSADTVAFFGMYAWKLGWFQRTD 217

[Close]

BLAST of Spo12343.1 vs. NCBI nr
Match: gi|659101063|ref|XP_008451405.1| (PREDICTED: uncharacterized protein LOC103492708 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 3.300e-73
Identity = 150/229 (65.50%), Postives = 175/229 (76.42%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           M  L+P SP +  FC  PS    FSH T+  L    +K S R+  +S+ L T   ++E  
Sbjct: 1   MNTLIPTSPCN--FCYIPSF---FSHTTAFSLKLSAIKFSHRLRANSNHLQTQ-AIEEPK 60

Query: 61  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120
           +++  +        E    + ++SAPA++KDLKKVV K AATFAPRASTASKNPAVPG+T
Sbjct: 61  EEENGIAA------EPQQLTKASSAPALDKDLKKVVQKTAATFAPRASTASKNPAVPGTT 120

Query: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180
           LY VFE+Q YASM LGGVLSFNL+FPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE
Sbjct: 121 LYTVFEVQGYASMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180

Query: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLL+PLLNVIIPFF KSFAVVWSADT+AFF MYAWKLGW Q+ +
Sbjct: 181 ALNYLFLLIPLLNVIIPFFLKSFAVVWSADTIAFFGMYAWKLGWFQRRD 217

[Close]

BLAST of Spo12343.1 vs. NCBI nr
Match: gi|567903340|ref|XP_006444158.1| (hypothetical protein CICLE_v10022169mg [Citrus clementina])

HSP 1 Score: 283.1 bits (723), Expect = 4.300e-73
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 1

		  
Query: 2   TVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKG-SFRIHGSSDKLDTPITMDEQD 61
           T+++  SP+S H    P +R          L +P  +G S +I  S++++D   T++E  
Sbjct: 3   TLIISTSPYSCHVSKFPLLRNR--------LCWPKFRGTSLKIQASANEVDAQATVEESS 62

Query: 62  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 121
           Q ++ L     E +E N  S ST+ PA++KDLKKVV K AATFAPRASTA+KNPAVPG+ 
Sbjct: 63  QNEEPLP----EPKETNKLS-STAPPALDKDLKKVVQKTAATFAPRASTATKNPAVPGTI 122

Query: 122 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 181
           LY VFE+Q YASM LGG LSFNL+FPSNEPDIWRLMGMWSIWMF IPSLRARDCSKNEKE
Sbjct: 123 LYTVFEVQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFAIPSLRARDCSKNEKE 182

Query: 182 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLL+PLLNVIIPFFWKSF+VVWSADTVAFF MYAWK GWL+ TE
Sbjct: 183 ALNYLFLLIPLLNVIIPFFWKSFSVVWSADTVAFFAMYAWKFGWLRTTE 218

[Close]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUP6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_032860 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 5.200e-126
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD
Sbjct: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60

Query: 61  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120
           QQQQNLEINKLEERENNT STSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST
Sbjct: 61  QQQQNLEINKLEERENNTPSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120

Query: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180
           LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE
Sbjct: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180

Query: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES 231
           ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES
Sbjct: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTES 230

[Close]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ETU8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g157790 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 2.400e-99
Identity = 192/230 (83.48%), Postives = 205/230 (89.13%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           MTVLLPAS FS HFCN PS++YSFS KTS   S  PLKG FRIHGSSDKLDTPITM+   
Sbjct: 1   MTVLLPASLFSCHFCNLPSVKYSFSQKTSF--SSLPLKGCFRIHGSSDKLDTPITMEVN- 60

Query: 61  QQQQNLEINKLEERENNTS-STSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGS 120
             ++++++  LEEREN    S+ST+APA+EKDLKKVVNKAAATFAPRASTASKNPAVPGS
Sbjct: 61  -VEEDMQVTNLEERENEIRVSSSTAAPAMEKDLKKVVNKAAATFAPRASTASKNPAVPGS 120

Query: 121 TLYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEK 180
           TLY VFE+QAYASM LGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCS  EK
Sbjct: 121 TLYTVFEVQAYASMLLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSSKEK 180

Query: 181 EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE
Sbjct: 181 EALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 226

[Close]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G392290 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.700e-74
Identity = 152/229 (66.38%), Postives = 176/229 (76.86%), Query Frame = 1

		  
Query: 1   MTVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKGSFRIHGSSDKLDTPITMDEQD 60
           M  L+P SP +  FC  PS    F H+T+  L    +K S R+  +S+ L T   ++E  
Sbjct: 1   MNTLIPTSPCN--FCYIPSF---FPHRTAFSLELSAIKFSHRLRANSNDLQTQ-AVEEPK 60

Query: 61  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 120
           +++  +        E    + ++SAPA++KDLKKVV K AATFAPRASTASKNPAVPG+T
Sbjct: 61  EEENGIAA------EPQQQTKASSAPALDKDLKKVVQKTAATFAPRASTASKNPAVPGTT 120

Query: 121 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180
           LY VFE+Q YASM LGGVLSFNL+FPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE
Sbjct: 121 LYTVFEVQGYASMLLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 180

Query: 181 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLLVPLLNVIIPFF KSFAVVWSADTVAFF MYAWKLGW Q+T+
Sbjct: 181 ALNYLFLLVPLLNVIIPFFLKSFAVVWSADTVAFFGMYAWKLGWFQRTD 217

[Close]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Match: A0A067H653_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027319mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.000e-73
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 1

		  
Query: 2   TVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKG-SFRIHGSSDKLDTPITMDEQD 61
           T+++  SP+S H    P +R          L +P  +G S +I  S++++D   T++E  
Sbjct: 3   TLIISTSPYSCHVSKFPLLRNR--------LCWPKFRGTSLKIQASANEVDAQATVEESS 62

Query: 62  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 121
           Q ++ L     E +E N  S ST+ PA++KDLKKVV K AATFAPRASTA+KNPAVPG+ 
Sbjct: 63  QNEEPLP----EPKETNKLS-STAPPALDKDLKKVVQKTAATFAPRASTATKNPAVPGTI 122

Query: 122 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 181
           LY VFE+Q YASM LGG LSFNL+FPSNEPDIWRLMGMWSIWMF IPSLRARDCSKNEKE
Sbjct: 123 LYTVFEVQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFAIPSLRARDCSKNEKE 182

Query: 182 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLL+PLLNVIIPFFWKSF+VVWSADTVAFF MYAWK GWL+ TE
Sbjct: 183 ALNYLFLLIPLLNVIIPFFWKSFSVVWSADTVAFFAMYAWKFGWLRTTE 218

[Close]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Match: V4TAQ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022169mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.000e-73
Identity = 148/229 (64.63%), Postives = 175/229 (76.42%), Query Frame = 1

		  
Query: 2   TVLLPASPFSRHFCNPPSIRYSFSHKTSICLSFPPLKG-SFRIHGSSDKLDTPITMDEQD 61
           T+++  SP+S H    P +R          L +P  +G S +I  S++++D   T++E  
Sbjct: 3   TLIISTSPYSCHVSKFPLLRNR--------LCWPKFRGTSLKIQASANEVDAQATVEESS 62

Query: 62  QQQQNLEINKLEERENNTSSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGST 121
           Q ++ L     E +E N  S ST+ PA++KDLKKVV K AATFAPRASTA+KNPAVPG+ 
Sbjct: 63  QNEEPLP----EPKETNKLS-STAPPALDKDLKKVVQKTAATFAPRASTATKNPAVPGTI 122

Query: 122 LYQVFEIQAYASMFLGGVLSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKE 181
           LY VFE+Q YASM LGG LSFNL+FPSNEPDIWRLMGMWSIWMF IPSLRARDCSKNEKE
Sbjct: 123 LYTVFEVQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFAIPSLRARDCSKNEKE 182

Query: 182 ALNYLFLLVPLLNVIIPFFWKSFAVVWSADTVAFFLMYAWKLGWLQKTE 230
           ALNYLFLL+PLLNVIIPFFWKSF+VVWSADTVAFF MYAWK GWL+ TE
Sbjct: 183 ALNYLFLLIPLLNVIIPFFWKSFSVVWSADTVAFFAMYAWKFGWLRTTE 218

[Close]

BLAST of Spo12343.1 vs. TAIR (Arabidopsis)
Match: AT2G48070.3 (resistance to phytophthora 1)

HSP 1 Score: 256.9 bits (655), Expect = 1.200e-68
Identity = 125/155 (80.65%), Postives = 139/155 (89.68%), Query Frame = 1

		  
Query: 79  SSTSTSAPAIEKDLKKVVNKAAATFAPRASTASKNPAVPGSTLYQVFEIQAYASMFLGGV 138
           S   +S+ A+ KDLKKVVNK AATFAPRASTASKNPA+PG+TLY+VFE+Q YASMFLGGV
Sbjct: 47  SPLPSSSSALGKDLKKVVNKTAATFAPRASTASKNPALPGTTLYKVFEVQGYASMFLGGV 106

Query: 139 LSFNLVFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSKNEKEALNYLFLLVPLLNVIIPF 198
           LSFNL+FPS+EPD+WRLMGMWSIWMFTIPSLRARDC   EKEALNYLFL+VPLLNV IPF
Sbjct: 107 LSFNLLFPSSEPDLWRLMGMWSIWMFTIPSLRARDCPSKEKEALNYLFLIVPLLNVAIPF 166

Query: 199 FWKSFAVVWSADTVAFFLMYAWK----LGWLQKTE 230
           FWKSFA+VWSADTVAFF MYAWK    LGWL++TE
Sbjct: 167 FWKSFALVWSADTVAFFAMYAWKVCRMLGWLERTE 201

The following BLAST results are available for this feature:

BLAST of Spo12343.1 vs. NCBI nr
BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
BLAST of Spo12343.1 vs. ExPASy Swiss-Prot
BLAST of Spo12343.1 vs. TAIR (Arabidopsis)

BLAST of Spo12343.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902232324\|gb\|KNA22557.1\|	7.5e-126	99.5	hypothetical protein SOVF_0328...	[more]
gi\|731344722\|ref\|XP_010683572.1\|	3.5e-99	83.4	PREDICTED: uncharacterized pro...	[more]
gi\|449462284\|ref\|XP_004148871.1\|	3.9e-74	66.3	PREDICTED: uncharacterized pro...	[more]
gi\|659101063\|ref\|XP_008451405.1\|	3.3e-73	65.5	PREDICTED: uncharacterized pro...	[more]
gi\|567903340\|ref\|XP_006444158.1\|	4.3e-73	64.6	hypothetical protein CICLE_v10...	[more]

BLAST of Spo12343.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RUP6_SPIOL	5.2e-126	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8ETU8_BETVU	2.4e-99	83.4	Uncharacterized protein OS=Bet...	[more]
A0A0A0KAL9_CUCSA	2.7e-74	66.3	Uncharacterized protein OS=Cuc...	[more]
A0A067H653_CITSI	3.0e-73	64.6	Uncharacterized protein OS=Cit...	[more]
V4TAQ0_9ROSI	3.0e-73	64.6	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo12343.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo12343.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G48070.3	1.2e-68	80.6	resistance to phytophthora 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 54..76 scor
None	No IPR available	PANTHER	PTHR36359	FAMILY NOT NAMED	coord: 54..229 score: 5.3
None	No IPR available	PANTHER	PTHR36359:SF1	RESISTANCE TO PHYTOPHTHORA 1 PROTEIN	coord: 54..229 score: 5.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0030091	protein repair
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006508	proteolysis
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006412	translation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0006396	RNA processing
biological_process	GO:0070475	rRNA base methylation
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0042793	plastid transcription
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004046	aminoacylase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10106	0.72	Barchart \| Table
Spo24081	0.71	Barchart \| Table
Spo00214	0.71	Barchart \| Table
Spo16643	0.70	Barchart \| Table
Spo07229	0.70	Barchart \| Table
Spo24016	0.69	Barchart \| Table
Spo02964	0.69	Barchart \| Table
Spo04433	0.69	Barchart \| Table
Spo10916	0.68	Barchart \| Table
Spo24325	0.68	Barchart \| Table
Spo12228	0.67	Barchart \| Table
Spo21074	0.67	Barchart \| Table
Spo15390	0.67	Barchart \| Table
Spo10744	0.66	Barchart \| Table
Spo15531	0.66	Barchart \| Table
Spo05841	0.66	Barchart \| Table
Spo26355	0.65	Barchart \| Table
Spo09769	0.65	Barchart \| Table
Spo11417	0.65	Barchart \| Table