Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCAACTGGAAATGAAGGGGGTTCTGGGTCTAATTTGAGTCACTCAGTTGACTGTGAGACCTTAAATGGGAGTAATTTGAACAACCATATATCTTTGCAAGTTTCTACATCTAGAAAGGGACTATTGAGTGATGAAAAATCGCCAAGGGGCTTCACCGACAATCCCATTAGTCTGTCTAGCAGATTGAAGTTGCTAAAGATCAGTCCGAAAGGCAAACGGACTTCTCCCTCTATTGGGTTTTATAGAATTTCCAAGGATAAGGATGAGCTCTCGAGTAGTGCTCTGCCTCCTGCCATACAAGGTGTCCGAAAACGTTTCAAAGATGTGATGTCTAACAAAGTTGATTGGCCTTTTGTGATGCAAATGTGCAAAGATTGGGTTAAGAAACCATTGAATATGGTCCTTTTCCTGTGGATTATTTGTGTTGCTGTGTCAGGTGGCATTCTGTTTCTTGTGATGACAGGAATGCTAAACCATCTTCTTCCAAAGAAATCACAGAGGGATGAGTGGTTTGAGGTTAATAACCAGATCATCAATGCCCTCTTCACTCTAATGTGTCTTTACCAACACCCAAAACGGTTCTACCATTTGGTGCTTTTGTGTAGGTGGAAGTCGGATGATATATCAGTATTAAGGAAGATTTATTGCAAGAACGGAACTGCTAAACCCAATGAACGGGCACACCTGATGTTTGTGGTTATTTTGCTTCATATAAATTGTTTTGCTCAATATGCTTTATGCTGCCTTAATCTGGGTTATAGAAGATCTGAGCGGCCACTTATTGGTGTTGGTGTTTGCATAACATTTGCCATTGCAGCTCCTGCAGTTGCAGGATTGTACTGTGTTCTTAGCCCCCTCGGGAAGGATTATGAATGTGATGCTGATGAGGAAGCACCTAAACAGTCGAGGAGGCAATCATTTGAAAAAAAATATGCATTTGCGATCCGAGATGAAAGAGGGATTGTTGAGAAAAAACCTGAGTGGAAAGGAGGGCTGTTTAGCTTATGGGAAGATTTTGTTGTGGCATACCTCTCAATTTTCTGCTGCTTTTGTGTCTTTGGTTGGAATTTGGAAAGGCTTGGTTTTGGGAATATGTATGTTCACATAGCAACATTTCTCCTTTTCTGCATGGCCCCCTTTTGGATCTTCAACTTGGCTGCTGTCAACATTGATAATGACGCAATAAGAGAGATTTTGGGCATTACTGGTATTGCACTCTGTGTGTTTGGCTTGCTATATGGAGGGTTTTGGCGAATTCAAATGAGAAAACGATTCAACCTGCCACCAAATAACATGTGTTTTGGAAAACCTAATGTTGCAGATTGTGTTCAGTGGCTGTTTTGCTGCTGGTGTTCTCTGGCACAGGAAGTTCGAACAGGAGATTTCTATGAGACTGTGGAAGATAGATTTTACGTTAAGAATGAAAATGACGTTCATACTCCTCTTACCCCATTACCTCGTGAAGGTAGTACTGGTACTCAATCCATGTCTGATTTGAGCACCCCATTTTGGTTGAATTCTGGTTCATCTAAGAATAAACCTTCAGTATTGAAAAATGAAACTATGATGCCACCTGACCCGACAACAATGAGAATGGAAGTAGAGGATCTTCGGGAAGTATGA ATGGTTTCAACTGGAAATGAAGGGGGTTCTGGGTCTAATTTGAGTCACTCAGTTGACTGTGAGACCTTAAATGGGAGTAATTTGAACAACCATATATCTTTGCAAGTTTCTACATCTAGAAAGGGACTATTGAGTGATGAAAAATCGCCAAGGGGCTTCACCGACAATCCCATTAGTCTGTCTAGCAGATTGAAGTTGCTAAAGATCAGTCCGAAAGGCAAACGGACTTCTCCCTCTATTGGGTTTTATAGAATTTCCAAGGATAAGGATGAGCTCTCGAGTAGTGCTCTGCCTCCTGCCATACAAGGTGTCCGAAAACGTTTCAAAGATGTGATGTCTAACAAAGTTGATTGGCCTTTTGTGATGCAAATGTGCAAAGATTGGGTTAAGAAACCATTGAATATGGTCCTTTTCCTGTGGATTATTTGTGTTGCTGTGTCAGGTGGCATTCTGTTTCTTGTGATGACAGGAATGCTAAACCATCTTCTTCCAAAGAAATCACAGAGGGATGAGTGGTTTGAGGTTAATAACCAGATCATCAATGCCCTCTTCACTCTAATGTGTCTTTACCAACACCCAAAACGGTTCTACCATTTGGTGCTTTTGTGTAGGTGGAAGTCGGATGATATATCAGTATTAAGGAAGATTTATTGCAAGAACGGAACTGCTAAACCCAATGAACGGGCACACCTGATGTTTGTGGTTATTTTGCTTCATATAAATTGTTTTGCTCAATATGCTTTATGCTGCCTTAATCTGGGTTATAGAAGATCTGAGCGGCCACTTATTGGTGTTGGTGTTTGCATAACATTTGCCATTGCAGCTCCTGCAGTTGCAGGATTGTACTGTGTTCTTAGCCCCCTCGGGAAGGATTATGAATGTGATGCTGATGAGGAAGCACCTAAACAGTCGAGGAGGCAATCATTTGAAAAAAAATATGCATTTGCGATCCGAGATGAAAGAGGGATTGTTGAGAAAAAACCTGAGTGGAAAGGAGGGCTGTTTAGCTTATGGGAAGATTTTGTTGTGGCATACCTCTCAATTTTCTGCTGCTTTTGTGTCTTTGGTTGGAATTTGGAAAGGCTTGGTTTTGGGAATATGTATGTTCACATAGCAACATTTCTCCTTTTCTGCATGGCCCCCTTTTGGATCTTCAACTTGGCTGCTGTCAACATTGATAATGACGCAATAAGAGAGATTTTGGGCATTACTGGTATTGCACTCTGTGTGTTTGGCTTGCTATATGGAGGGTTTTGGCGAATTCAAATGAGAAAACGATTCAACCTGCCACCAAATAACATGTGTTTTGGAAAACCTAATGTTGCAGATTGTGTTCAGTGGCTGTTTTGCTGCTGGTGTTCTCTGGCACAGGAAGTTCGAACAGGAGATTTCTATGAGACTGTGGAAGATAGATTTTACGTTAAGAATGAAAATGACGTTCATACTCCTCTTACCCCATTACCTCGTGAAGGTAGTACTGGTACTCAATCCATGTCTGATTTGAGCACCCCATTTTGGTTGAATTCTGGTTCATCTAAGAATAAACCTTCAGTATTGAAAAATGAAACTATGATGCCACCTGACCCGACAACAATGAGAATGGAAGTAGAGGATCTTCGGGAAGTATGA ATGGTTTCAACTGGAAATGAAGGGGGTTCTGGGTCTAATTTGAGTCACTCAGTTGACTGTGAGACCTTAAATGGGAGTAATTTGAACAACCATATATCTTTGCAAGTTTCTACATCTAGAAAGGGACTATTGAGTGATGAAAAATCGCCAAGGGGCTTCACCGACAATCCCATTAGTCTGTCTAGCAGATTGAAGTTGCTAAAGATCAGTCCGAAAGGCAAACGGACTTCTCCCTCTATTGGGTTTTATAGAATTTCCAAGGATAAGGATGAGCTCTCGAGTAGTGCTCTGCCTCCTGCCATACAAGGTGTCCGAAAACGTTTCAAAGATGTGATGTCTAACAAAGTTGATTGGCCTTTTGTGATGCAAATGTGCAAAGATTGGGTTAAGAAACCATTGAATATGGTCCTTTTCCTGTGGATTATTTGTGTTGCTGTGTCAGGTGGCATTCTGTTTCTTGTGATGACAGGAATGCTAAACCATCTTCTTCCAAAGAAATCACAGAGGGATGAGTGGTTTGAGGTTAATAACCAGATCATCAATGCCCTCTTCACTCTAATGTGTCTTTACCAACACCCAAAACGGTTCTACCATTTGGTGCTTTTGTGTAGGTGGAAGTCGGATGATATATCAGTATTAAGGAAGATTTATTGCAAGAACGGAACTGCTAAACCCAATGAACGGGCACACCTGATGTTTGTGGTTATTTTGCTTCATATAAATTGTTTTGCTCAATATGCTTTATGCTGCCTTAATCTGGGTTATAGAAGATCTGAGCGGCCACTTATTGGTGTTGGTGTTTGCATAACATTTGCCATTGCAGCTCCTGCAGTTGCAGGATTGTACTGTGTTCTTAGCCCCCTCGGGAAGGATTATGAATGTGATGCTGATGAGGAAGCACCTAAACAGTCGAGGAGGCAATCATTTGAAAAAAAATATGCATTTGCGATCCGAGATGAAAGAGGGATTGTTGAGAAAAAACCTGAGTGGAAAGGAGGGCTGTTTAGCTTATGGGAAGATTTTGTTGTGGCATACCTCTCAATTTTCTGCTGCTTTTGTGTCTTTGGTTGGAATTTGGAAAGGCTTGGTTTTGGGAATATGTATGTTCACATAGCAACATTTCTCCTTTTCTGCATGGCCCCCTTTTGGATCTTCAACTTGGCTGCTGTCAACATTGATAATGACGCAATAAGAGAGATTTTGGGCATTACTGGTATTGCACTCTGTGTGTTTGGCTTGCTATATGGAGGGTTTTGGCGAATTCAAATGAGAAAACGATTCAACCTGCCACCAAATAACATGTGTTTTGGAAAACCTAATGTTGCAGATTGTGTTCAGTGGCTGTTTTGCTGCTGGTGTTCTCTGGCACAGGAAGTTCGAACAGGAGATTTCTATGAGACTGTGGAAGATAGATTTTACGTTAAGAATGAAAATGACGTTCATACTCCTCTTACCCCATTACCTCGTGAAGGTAGTACTGGTACTCAATCCATGTCTGATTTGAGCACCCCATTTTGGTTGAATTCTGGTTCATCTAAGAATAAACCTTCAGTATTGAAAAATGAAACTATGATGCCACCTGACCCGACAACAATGAGAATGGAAGTAGAGGATCTTCGGGAAGTATGA MVSTGNEGGSGSNLSHSVDCETLNGSNLNNHISLQVSTSRKGLLSDEKSPRGFTDNPISLSSRLKLLKISPKGKRTSPSIGFYRISKDKDELSSSALPPAIQGVRKRFKDVMSNKVDWPFVMQMCKDWVKKPLNMVLFLWIICVAVSGGILFLVMTGMLNHLLPKKSQRDEWFEVNNQIINALFTLMCLYQHPKRFYHLVLLCRWKSDDISVLRKIYCKNGTAKPNERAHLMFVVILLHINCFAQYALCCLNLGYRRSERPLIGVGVCITFAIAAPAVAGLYCVLSPLGKDYECDADEEAPKQSRRQSFEKKYAFAIRDERGIVEKKPEWKGGLFSLWEDFVVAYLSIFCCFCVFGWNLERLGFGNMYVHIATFLLFCMAPFWIFNLAAVNIDNDAIREILGITGIALCVFGLLYGGFWRIQMRKRFNLPPNNMCFGKPNVADCVQWLFCCWCSLAQEVRTGDFYETVEDRFYVKNENDVHTPLTPLPREGSTGTQSMSDLSTPFWLNSGSSKNKPSVLKNETMMPPDPTTMRMEVEDLREV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12351.1 vs. NCBI nr
Match: gi|902177209|gb|KNA08916.1| (hypothetical protein SOVF_158340 [Spinacia oleracea]) HSP 1 Score: 1115.5 bits (2884), Expect = 0.000e+0 Identity = 541/542 (99.82%), Postives = 541/542 (99.82%), Query Frame = 1
BLAST of Spo12351.1 vs. NCBI nr
Match: gi|731344737|ref|XP_010683576.1| (PREDICTED: uncharacterized protein LOC104898227 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 864.0 bits (2231), Expect = 1.400e-247 Identity = 414/535 (77.38%), Postives = 460/535 (85.98%), Query Frame = 1
BLAST of Spo12351.1 vs. NCBI nr
Match: gi|643706996|gb|KDP22806.1| (hypothetical protein JCGZ_00393 [Jatropha curcas]) HSP 1 Score: 642.9 bits (1657), Expect = 5.100e-181 Identity = 296/475 (62.32%), Postives = 369/475 (77.68%), Query Frame = 1
BLAST of Spo12351.1 vs. NCBI nr
Match: gi|802761285|ref|XP_012089737.1| (PREDICTED: uncharacterized protein LOC105648071 [Jatropha curcas]) HSP 1 Score: 642.9 bits (1657), Expect = 5.100e-181 Identity = 296/475 (62.32%), Postives = 369/475 (77.68%), Query Frame = 1
BLAST of Spo12351.1 vs. NCBI nr
Match: gi|566210158|ref|XP_002323648.2| (hypothetical protein POPTR_0016s13740g [Populus trichocarpa]) HSP 1 Score: 636.7 bits (1641), Expect = 3.600e-179 Identity = 310/502 (61.75%), Postives = 376/502 (74.90%), Query Frame = 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQT7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158340 PE=4 SV=1) HSP 1 Score: 1115.5 bits (2884), Expect = 0.000e+0 Identity = 541/542 (99.82%), Postives = 541/542 (99.82%), Query Frame = 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3G6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g157860 PE=4 SV=1) HSP 1 Score: 864.0 bits (2231), Expect = 9.700e-248 Identity = 414/535 (77.38%), Postives = 460/535 (85.98%), Query Frame = 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Match: A0A067JFX5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00393 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 3.500e-181 Identity = 296/475 (62.32%), Postives = 369/475 (77.68%), Query Frame = 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Match: B9IGM1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s13740g PE=4 SV=2) HSP 1 Score: 636.7 bits (1641), Expect = 2.500e-179 Identity = 310/502 (61.75%), Postives = 376/502 (74.90%), Query Frame = 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Match: A0A067JNX4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03366 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 5.600e-179 Identity = 318/555 (57.30%), Postives = 398/555 (71.71%), Query Frame = 1
BLAST of Spo12351.1 vs. TAIR (Arabidopsis)
Match: AT5G05350.1 (PLAC8 family protein) HSP 1 Score: 583.6 bits (1503), Expect = 1.300e-166 Identity = 297/522 (56.90%), Postives = 365/522 (69.92%), Query Frame = 1
BLAST of Spo12351.1 vs. TAIR (Arabidopsis)
Match: AT3G10980.1 (PLAC8 family protein) HSP 1 Score: 581.6 bits (1498), Expect = 4.900e-166 Identity = 306/568 (53.87%), Postives = 384/568 (67.61%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12351.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo12351.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo12351.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo12351.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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