Spo12383 (gene)

Overview
NameSpo12383
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionEarly light-induced protein, putative
Locationchr6 : 37204996 .. 37205595 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

mRNA sequence

ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

Coding sequence (CDS)

ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

Protein sequence

MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12383.1Spo12383.1mRNA


Homology
[Close]
BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902194451|gb|KNA12559.1| (hypothetical protein SOVF_124910 [Spinacia oleracea])

HSP 1 Score: 371.3 bits (952), Expect = 1.000e-99
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNPTSSSPTPTP P PTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 343.6 bits (880), Expect = 2.300e-91
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS    PTPIPTPRPQPK VSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS----PTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 342.8 bits (878), Expect = 4.000e-91
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMA EGAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMA-EGAGGEPKLDSGVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SS    PTPIPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KSNPTVSS----PTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 333.2 bits (853), Expect = 3.200e-88
Identity = 179/199 (89.95%), Postives = 185/199 (92.96%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVG F NGS AYPLGFNPRM KRV+FGVKCMAEE AGGEPKL+S +P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNP+ SS T     IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVE
Sbjct: 61  KPNPSVSSSTS----IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 328.2 bits (840), Expect = 1.000e-86
Identity = 178/200 (89.00%), Postives = 181/200 (90.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE  GGEPKLDS +
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS   +PT IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS---SPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALA TE V G ALV
Sbjct: 181 AMLGLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124910 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.300e-100
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNPTSSSPTPTP P PTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199
[Close]
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.600e-91
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS    PTPIPTPRPQPK VSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS----PTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196
[Close]
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.800e-91
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMA EGAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMA-EGAGGEPKLDSGVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SS    PTPIPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KSNPTVSS----PTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 194
[Close]
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.200e-88
Identity = 179/199 (89.95%), Postives = 185/199 (92.96%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVG F NGS AYPLGFNPRM KRV+FGVKCMAEE AGGEPKL+S +P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNP+ SS T     IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVE
Sbjct: 61  KPNPSVSSSTS----IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 195
[Close]
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.100e-87
Identity = 178/200 (89.00%), Postives = 181/200 (90.50%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE  GGEPKLDS +
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS   +PT IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS---SPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALA TE V G ALV
Sbjct: 181 AMLGLVALAFTEFVTGSALV 197
[Close]
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.600e-44
Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGTFA-NGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKP 63
           S  +Q++ +  + T   N +K +  G  P + +    GV+CMAE G    P  + S P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + +++ P P  +P P P  +PK VST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQPLPK-SPSPPPPMKPK-VSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QIS+GG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 200
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.400e-42
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 1 

		  

Query: 40  GVKCMAEEGAGGEP-KLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSG 99
           GV+CMA+    G+P K D SVP  + TS++P   P   P P  +PK VST F DL AFSG
Sbjct: 39  GVRCMAQ----GDPIKEDPSVPSTS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSG 98

Query: 100 PAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGS 159
           PAPERINGRLAM+GFVAAIA+ELS G ++F QIS+GG  WFLGT+ LL++AS+VPL +G 
Sbjct: 99  PAPERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGI 158

Query: 160 RAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 200
           RAEAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 RAEAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
[Close]
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.400e-42
Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 1 

		  

Query: 1   MAMSMQVQALLSNSVGTFANGSKA-----YPLGFNPRMAKRVNFGVKCMAEEGAGGEPKL 60
           MA+S   Q+++SNS+   ++ S+       P  + P + + V+  V+ MAE    GEPK 
Sbjct: 1   MAVS-SCQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAE----GEPKE 60

Query: 61  DSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVA 120
            S V     T ++ TPTP P  T   +P  +ST F+DL AFSGPAPERINGRLAMIGFVA
Sbjct: 61  QSKVAVDPTTPTASTPTPQPAYT---RPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVA 120

Query: 121 AIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELW 180
           A+ VE++ G  L  Q+S GG  WFLGTS+LLS+ASL+P  QG   E+K++ +M+++AE W
Sbjct: 121 AMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFW 180

Query: 181 NGRIAMLGLVALAVTEIVKGGALV 200
           NGRIAMLGLVALA TE VKG +LV
Sbjct: 181 NGRIAMLGLVALAFTEFVKGTSLV 196
[Close]
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.600e-31
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 1 

		  

Query: 79  PRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNG-GSQ 138
           P P     ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+ +G G  
Sbjct: 44  PPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 103

Query: 139 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKG 196
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AM+GLVALA TEI+ G
Sbjct: 104 WFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161
[Close]
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.700e-31
Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 1 

		  

Query: 79  PRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNG-GSQ 138
           P P     ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+ +G G  
Sbjct: 49  PPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 108

Query: 139 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGA 198
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AMLGLVALA TEI+ G  
Sbjct: 109 WFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAP 168

Query: 199 LV 200
            +
Sbjct: 169 FI 170
[Close]
BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 180.6 bits (457), Expect = 9.200e-46
Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 1 

		  

Query: 4   SMQVQALLSNSVGTFA-NGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKP 63
           S  +Q++ +  + T   N +K +  G  P + +    GV+CMAE G    P  + S P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + +++ P P  +P P P  +PK VST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQPLPK-SPSPPPPMKPK-VSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QIS+GG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 200
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195
[Close]
BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.900e-43
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 1 

		  

Query: 40  GVKCMAEEGAGGEP-KLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSG 99
           GV+CMA+    G+P K D SVP  + TS++P   P   P P  +PK VST F DL AFSG
Sbjct: 39  GVRCMAQ----GDPIKEDPSVPSTS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSG 98

Query: 100 PAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGS 159
           PAPERINGRLAM+GFVAAIA+ELS G ++F QIS+GG  WFLGT+ LL++AS+VPL +G 
Sbjct: 99  PAPERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGI 158

Query: 160 RAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 200
           RAEAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 RAEAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193
The following BLAST results are available for this feature:
BLAST of Spo12383.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902194451|gb|KNA12559.1|1.0e-9998.4hypothetical protein SOVF_1249... [more]
gi|902150947|gb|KNA05469.1|2.3e-9193.5hypothetical protein SOVF_1900... [more]
gi|902202340|gb|KNA14240.1|4.0e-9193.4hypothetical protein SOVF_1093... [more]
gi|902164229|gb|KNA06948.1|3.2e-8889.9hypothetical protein SOVF_1763... [more]
gi|902208596|gb|KNA15989.1|1.0e-8689.0hypothetical protein SOVF_0932... [more]
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BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZ64_SPIOL7.3e-10098.4Uncharacterized protein OS=Spi... [more]
A0A0K9QDX3_SPIOL1.6e-9193.5Uncharacterized protein OS=Spi... [more]
A0A0K9R401_SPIOL2.8e-9193.4Uncharacterized protein OS=Spi... [more]
A0A0K9QJR9_SPIOL2.2e-8889.9Uncharacterized protein OS=Spi... [more]
A0A0K9RAF4_SPIOL7.1e-8789.0Uncharacterized protein OS=Spi... [more]
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BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELIP1_ARATH1.6e-4452.7Early light-induced protein 1,... [more]
ELIP2_ARATH3.4e-4263.3Early light-induced protein 2,... [more]
ELI_PEA3.4e-4251.4Early light-induced protein, c... [more]
ELI6_HORVU1.6e-3161.0Low molecular mass early light... [more]
ELI9_HORVU2.7e-3159.8Low molecular mass early light... [more]
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BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G22840.19.2e-4652.7Chlorophyll A-B binding family... [more]
AT4G14690.11.9e-4363.3Chlorophyll A-B binding family... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 100..151
score: 3.
IPR023329Chlorophyll a/b binding protein domainunknownSSF103511Chlorophyll a-b binding proteincoord: 79..195
score: 3.4
NoneNo IPR availableGENE3D1.20.1620.10coord: 170..197
score: 1.3E-4coord: 101..162
score: 3.
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 36..199
score: 1.6
NoneNo IPR availablePANTHERPTHR14154:SF5EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 36..199
score: 1.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009812 flavonoid metabolic process
biological_process GO:0009308 amine metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006984 ER-nucleus signaling pathway
biological_process GO:0006457 protein folding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0031347 regulation of defense response
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0071555 cell wall organization
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0042128 nitrate assimilation
biological_process GO:0006857 oligopeptide transport
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009611 response to wounding
biological_process GO:0006810 transport
biological_process GO:0009688 abscisic acid biosynthetic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009987 cellular process
biological_process GO:0007275 multicellular organism development
biological_process GO:0050789 regulation of biological process
biological_process GO:0005982 starch metabolic process
biological_process GO:0009639 response to red or far red light
biological_process GO:0048513 animal organ development
biological_process GO:0007389 pattern specification process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0032957 inositol trisphosphate metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0050896 response to stimulus
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006855 drug transmembrane transport
cellular_component GO:0005622 intracellular
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0048046 apoplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005739 mitochondrion
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0035251 UDP-glucosyltransferase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0047911 galacturan 1,4-alpha-galacturonidase activity
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0051766 inositol trisphosphate kinase activity
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function GO:0047325 inositol tetrakisphosphate 1-kinase activity
molecular_function GO:0080048 GDP-D-glucose phosphorylase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0016711 flavonoid 3'-monooxygenase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0015293 symporter activity
molecular_function GO:0003824 catalytic activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo269810.78Barchart | Table
Spo280820.78Barchart | Table
Spo123820.78Barchart | Table
Spo244900.78Barchart | Table
Spo016930.78Barchart | Table
Spo128690.77Barchart | Table
Spo044240.75Barchart | Table
Spo143460.75Barchart | Table
Spo123850.75Barchart | Table
Spo106770.75Barchart | Table
Spo056350.75Barchart | Table
Spo280910.75Barchart | Table
Spo075790.75Barchart | Table
Spo280010.75Barchart | Table
Spo098460.74Barchart | Table
Spo113970.74Barchart | Table
Spo184840.74Barchart | Table
Spo117210.74Barchart | Table
Spo084670.74Barchart | Table
Spo055480.74Barchart | Table
Spo243810.73Barchart | Table
Spo052580.73Barchart | Table
Spo283230.73Barchart | Table
Spo130190.73Barchart | Table
Spo230780.73Barchart | Table
Spo172380.72Barchart | Table
Spo113680.72Barchart | Table
Spo121470.72Barchart | Table
Spo112700.72Barchart | Table
Spo027750.72Barchart | Table
Spo058980.72Barchart | Table
Spo182170.72Barchart | Table
Spo113920.72Barchart | Table
Spo122680.71Barchart | Table
Spo258640.71Barchart | Table
Spo224340.71Barchart | Table
Spo219770.71Barchart | Table
Spo103520.71Barchart | Table
Spo141330.71Barchart | Table
Spo223320.70Barchart | Table
Spo154550.70Barchart | Table
Spo045920.70Barchart | Table
Spo263350.70Barchart | Table
Spo265570.70Barchart | Table
Spo136470.70Barchart | Table
Spo217110.70Barchart | Table
Spo005610.69Barchart | Table
Spo020440.69Barchart | Table
Spo056840.69Barchart | Table
Spo081680.69Barchart | Table
Spo100540.69Barchart | Table
Spo130300.69Barchart | Table
Spo137930.69Barchart | Table
Spo150310.69Barchart | Table
Spo194870.69Barchart | Table
Spo222770.69Barchart | Table
Spo259190.69Barchart | Table
Spo086350.68Barchart | Table
Spo017210.68Barchart | Table
Spo011170.68Barchart | Table
Spo013620.68Barchart | Table
Spo021910.68Barchart | Table
Spo256560.68Barchart | Table
Spo118400.68Barchart | Table
Spo252620.68Barchart | Table
Spo156910.68Barchart | Table
Spo157070.68Barchart | Table
Spo252520.68Barchart | Table
Spo163160.68Barchart | Table
Spo010870.68Barchart | Table
Spo225450.67Barchart | Table
Spo152560.67Barchart | Table
Spo182900.67Barchart | Table
Spo202230.67Barchart | Table
Spo216170.67Barchart | Table
Spo069750.67Barchart | Table
Spo040940.67Barchart | Table
Spo040150.67Barchart | Table
Spo254440.67Barchart | Table
Spo030150.67Barchart | Table
Spo024330.67Barchart | Table
Spo128890.67Barchart | Table
Spo109580.66Barchart | Table
Spo112060.66Barchart | Table
Spo197290.66Barchart | Table
Spo006600.66Barchart | Table
Spo209990.66Barchart | Table
Spo215440.66Barchart | Table
Spo123860.66Barchart | Table
Spo097160.66Barchart | Table
Spo222930.66Barchart | Table
Spo264390.66Barchart | Table
Spo149480.66Barchart | Table
Spo126870.66Barchart | Table
Spo038990.66Barchart | Table
Spo030720.66Barchart | Table
Spo246090.66Barchart | Table
Spo162050.66Barchart | Table
Spo150320.66Barchart | Table
Spo187830.66Barchart | Table
Spo194560.66Barchart | Table
Spo102190.66Barchart | Table
Spo222920.65Barchart | Table
Spo233370.65Barchart | Table
Spo151690.65Barchart | Table
Spo115110.65Barchart | Table
Spo122520.65Barchart | Table
Spo132700.65Barchart | Table