Spo12555 (gene) | SpinachBase

Overview


Name	Spo12555
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Translocation protein SEC63-like protein
Location	chr6 : 9494792 .. 9498386 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATGTTGCCTCAACGGTGTCGAAGACCGCTGGGAGGAAATTTAGAATCCGTGTTTTGTCGACGCTGGTCTGCGTCTACTGTATTTCTCGTCAAAAAGAGGCGTCGAGATTTCGTCCGTGCTAGTCACGTGTGTTACTAAACCGCCAGTTCAAAGAAATACCCACTCCCGCAGAAATATAATCTCCAATACTAATCAACCCTAGCCGCTCGCCCATTCATCTTCTCTCTCCTCCCTCCCAACTTGCAAAACATCATATCGTCTCAAATCCATCAATGGGCGAATCCAAATTGGTTTCGCTCTCCTAATATTATGCTGCTGCATCTTCCCCGCCTACTATTCGCCGCCATTGAAATAGAAGCACGAAAGAGGAGTTCATGGAAGACTGCTACTCAAACCGTTGTTCCGTCGTCAATATTACTTGCATAAATCTACTATTTTTTAAACCTAAATCCAAGAAGGAGATTGTTGTATGTTGAACTTATTCACTCCAGGTAATTTTTGATTTATTTTACTGCAAATTTAAGGTTTTATCTTCAATTTTTCTAGGATCGGCACCCTTTGAGATTAATTTGATTCCCTTTTGTTTGGTTCCTGGTGAATTTTATAGCTCTGGTGTTGTGTTTTTTGAGTTTCTTCTTTTATTTTTTTCAAAAAAATTGGTTTTTTCTCTTCAATTTATCGAATATTCGGAAATTAGGGTTATTGATTTTGTTTTTTATTTTGGTTTGATTCACGATGATGAGGAGGGACCCTGGAAAATCCGTAGATTACTTATTATGAAGGCAAACCTGATATTACAGATGCTCCAAAGACCAAGTTCAGGTTTGTTGGGTTTTTAATATTTATTTTTTTGCCATTTTTTCAAGCTAATAGCTATTGACAATGCTGATTTTCCTTAAGAATTTTACTTTGTACTTACATTAAATAAATGATTTGCAATTGCAATTGTTGCATAAAATGGTGGGTGTTTGGGGGGCAATGTTGAATCTGCCTATTTCTTGCTCTATTGATGTGTAAGCTTACGAGTCGGTTTTTGGTTTTAATCTGTTCTGCTGGATCGTAATGATTGAACTAGTGGGTCCTGATGTTTCTGGACTATAGAATCGGGCAACTTTGTTAGTCGGGAGATGCATTTCAATTGAATTCATAGACAGTGAAAACATTGTAGTTTATTGTTTTAGCCGTTGCTAAGCAGGGTCAGGGGTTAGTAACTCTAGCTTGTTGAACTTTCTCTGTTGTATTCATTACTTCATAACTATCTTTAACACTTGAACATACTTGTTCAGGTGATACATTTTTCACTAGGCTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGGTATAACAATAGGTGCCTTGATTTTCTTTTTCTTATATGTTTGATTGGGTATTTTACTACAAGTATTATTTATTTCAGTATCCTAGATTTTGCTCAAAGATAAAAATATATGGCTTTAGAGAATGTTTAAAGTCCACACACTAGTACACTACTACAAAATATGTTATATCTCGACGCTGTTGAAGACCGTCAGCATGGAATATGACATTGCAGAAATGTGATCTATTGGTGCCCTGTTTGGCTGTTTGTGTTAATTTGGGTAGCTACTTGTTTTAGGCCTTGTTATCATGAACTGTCTAGGTTGAGTATTCTGACTACTTAATTGGATTTCTGTCTCTTTCTTTGCACCATTTTGGTAGTAGATTTTTCCTGTTGATATATATATTTTTTGTTAGTAGGTTGAGTAAACATGATATTGCTTGGGCTTATTGATTTGATCGTAGGAAAAATAACTATTTTATCTTTTAGTATATTTGGATGGTTGGTCACTATAGGTCGATTAAATATCGTTAATTTTTATACTCTCATTTACATTTTCTACCATGTGCCTACAAATCACATATATTTCCTGGTAGACACAATTGTTAAGGAAATAACTTACATATCAAATTTCTTTTATGGTAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTAATGGTGATCTGAAATGTGTCCTGGAACTTGCACATCATCTACTTGAGGAATTGATGAAGGTAATATAAACTTTCCAATGTTCTAGCACTTAAACAAATGAAATTATGACTGCATGCCATGAACCGTTGACATTCTGAAACCCGAGGATTTGAGTATTAACAGCCTACATTCTTCTGAACCGTTGATGATGTTGAATTATTGATGAGTGCTTTTTTTTTTATGGCCTATCATTCTTTGAAAGGATTCCAATATATGCTGATGATAACCTTTAACTTTGGAATAATTTAGCAGTTTCTCTATTTTTCTCTCTTTTTTTTTATTGAAAGTTATTTCAAGTTTCTCAGGGGTAACTATTTGACATAGCTTTATTTATCATGGAAACAAAGTGACTTGTACGACAAAACTTGGATTTGTTTTATAGCATTCCTGCCATCCTGATATTTAAACCCTTGTGGAAACTAAACTTCTTTGGAGGAATATTGATTAATGAGCCCACTTTGTTCTAAATATTTAATAGTTCAGAAAAGTCGTCTTTTTCTTTCATTATCTCTATTTTGGTTTAACATAGAATTGTCTTTCTACAAATGGTACAAAGCTACCAAATTCAATATGAAACAAACCCCTTTTAGAAAGGGGCGTTCAGCACTCCAGAAGTTGGATTTTTCTAAGTTAAAACTAAAATCAGGATTGTTAAAAGAGGATGAAAGTTGGGAATATAAGTAGCTTATTTATGCGAGTGCTCAATTAAGGTAGTGATTACAAAGTCTGTAAGTCCTTAATCTAGTGCGAACTCAATAATAATCAAATTGCGCAGGGCATGAAGTTTACAAACTTTTTTCCTTACTAATTTTGGAAGTGGACTAAGTTTTTAGGATGGAAGGAGTAGTAGATTGATCATACATGTTCTACTAAGCTGCCTCTTTACAGATTAAACTCATGTCTGTCATCAAATGCTGGTTCATATGTCAACTTTACAATCCTGGCATATTTCATGATTGCTATGCCAGTCTCATTTAGTCCTTCTTTTGGGTTAATATTGATACGATTCTGCAAATGTTTTCTCTTGTTTCATTAATATTTCATATTCTGATGCAGATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTAGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGGTACTGCAATTCTTAGATATCCTGGACTTTTTGATGTTATTTCAATGTCGTGTTATAGTAGTGTTAGTCTTCCACATCTAACTTGTCATAGTTCTAATCTTGCATGAGTGATAGTTTCTGTAAAGGTAGTGCTATACGTGGTAATTTGATTGAGCGAACAGTCCGATCTATTGATTGCTCCTAGATTTTGGTCTCTGTCATTATCATGTTTGATTCTGAGCTAGGCCTTTGTTGGTTTGAATAGCTGGTTTTAGAATACTCAGATGCAGATAGACAAAATTCAGGAGTTGATATCTGCAGGATCGACACTCCTTCATGTTACATTCTCATTATCCAATTTCAAAGAATGTGTAGAATGA

mRNA sequence

CGATGTTGCCTCAACGGTGTCGAAGACCGCTGGGAGGAAATTTAGAATCCGTGTTTTGTCGACGCTGGTCTGCGTCTACTGTATTTCTCGTCAAAAAGAGGCGTCGAGATTTCGTCCGTGCTAGTCACGTGTGTTACTAAACCGCCAGTTCAAAGAAATACCCACTCCCGCAGAAATATAATCTCCAATACTAATCAACCCTAGCCGCTCGCCCATTCATCTTCTCTCTCCTCCCTCCCAACTTGCAAAACATCATATCGTCTCAAATCCATCAATGGGCGAATCCAAATTGGTTTCGCTCTCCTAATATTATGCTGCTGCATCTTCCCCGCCTACTATTCGCCGCCATTGAAATAGAAGCACGAAAGAGGAGTTCATGGAAGACTGCTACTCAAACCGTTGTTCCGTCGTCAATATTACTTGCATAAATCTACTATTTTTTAAACCTAAATCCAAGAAGGAGATTGTTGTATGTTGAACTTATTCACTCCAGGGACCCTGGAAAATCCGTAGATTACTTATTATGAAGGCAAACCTGATATTACAGATGCTCCAAAGACCAAGTTCAGGCTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTAATGGTGATCTGAAATGTGTCCTGGAACTTGCACATCATCTACTTGAGGAATTGATGAAGATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTAGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGAATACTCAGATGCAGATAGACAAAATTCAGGAGTTGATATCTGCAGGATCGACACTCCTTCATGTTACATTCTCATTATCCAATTTCAAAGAATGTGTAGAATGA

Coding sequence (CDS)

ATGAAGGCAAACCTGATATTACAGATGCTCCAAAGACCAAGTTCAGGCTTTGAACTTCCTGGTGGCTGGCAGAAGGATAAAGATGCAATGGTTCTCAGTGTTATTCAGACACAATTGTTAATTCAAGCCCATTTAACTCGGGAAACAGCAGACCTACCTCCAACACTTAATGGTGATCTGAAATGTGTCCTGGAACTTGCACATCATCTACTTGAGGAATTGATGAAGATGGCTTTAATACCACGCACGGCTCAAGGTCATGGATGGCTTAGGCCTGCAATTAGGGTTGTCGAGCTTTCTCAGTGTGTGATTCAGAATACTCAGATGCAGATAGACAAAATTCAGGAGTTGATATCTGCAGGATCGACACTCCTTCATGTTACATTCTCATTATCCAATTTCAAAGAATGTGTAGAATGA

Protein sequence

MKANLILQMLQRPSSGFELPGGWQKDKDAMVLSVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPAIRVVELSQCVIQNTQMQIDKIQELISAGSTLLHVTFSLSNFKECVE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo12555.1	Spo12555.1	mRNA

Homology

[Close]

BLAST of Spo12555.1 vs. NCBI nr
Match: gi|902165156|gb|KNA07070.1| (hypothetical protein SOVF_175330 [Spinacia oleracea])

HSP 1 Score: 130.6 bits (327), Expect = 2.200e-27
Identity = 74/106 (69.81%), Postives = 79/106 (74.53%), Query Frame = 1


		  
Query: 34  VIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPA 93
           +++TQLLIQAHLTRETADLPPTLNGDLK VLELA  LLEELMKMALIPRTAQGHGWLRPA
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMKMALIPRTAQGHGWLRPA 359

Query: 94  IRVVELSQCVIQNTQMQIDKIQELISAGSTLLHVTF-SLSNFKECV 139
           I VVELSQCVIQ   +   K       GST     F  L +F E V
Sbjct: 360 IGVVELSQCVIQAVPLSAKK----AGGGSTEGIAPFLQLPHFSEAV 401

[Close]

BLAST of Spo12555.1 vs. NCBI nr
Match: gi|731321905|ref|XP_010671598.1| (PREDICTED: dnaJ protein ERDJ2A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 128.3 bits (321), Expect = 1.100e-26
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 1


		  
Query: 34  VIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPA 93
           +++TQLLIQAHLTRET DLPPTLNGDLK VLELA  LLEELMKMALIPRTAQGHGWLRPA
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMKMALIPRTAQGHGWLRPA 359

Query: 94  IRVVELSQCVIQNTQMQIDK 114
           I VVELSQCVIQ   +   K
Sbjct: 360 IGVVELSQCVIQAVPLSAKK 379

[Close]

BLAST of Spo12555.1 vs. NCBI nr
Match: gi|118481069|gb|ABK92488.1| (unknown [Populus trichocarpa])

HSP 1 Score: 111.7 bits (278), Expect = 1.000e-21
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+ADLPP L GD + VLELA  LLEELMKMA+IPRT+QGHGWLRP
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMKMAVIPRTSQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A  VVELSQC+IQ   +   K
Sbjct: 359 ATGVVELSQCIIQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. NCBI nr
Match: gi|743877355|ref|XP_011035368.1| (PREDICTED: dnaJ protein ERDJ2A-like [Populus euphratica])

HSP 1 Score: 111.7 bits (278), Expect = 1.000e-21
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+ADLPP L GD + VLELA  LLEELMKMA+IPRT+QGHGWLRP
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMKMAVIPRTSQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A  VVELSQC+IQ   +   K
Sbjct: 359 ATGVVELSQCIIQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. NCBI nr
Match: gi|566165358|ref|XP_002305942.2| (DNAJ heat shock N-terminal domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 111.7 bits (278), Expect = 1.000e-21
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+ADLPP L GD + VLELA  LLEELMKMA+IPRT+QGHGWLRP
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMKMAVIPRTSQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A  VVELSQC+IQ   +   K
Sbjct: 359 ATGVVELSQCIIQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175330 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.500e-27
Identity = 74/106 (69.81%), Postives = 79/106 (74.53%), Query Frame = 1


		  
Query: 34  VIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPA 93
           +++TQLLIQAHLTRETADLPPTLNGDLK VLELA  LLEELMKMALIPRTAQGHGWLRPA
Sbjct: 300 LVKTQLLIQAHLTRETADLPPTLNGDLKRVLELAPRLLEELMKMALIPRTAQGHGWLRPA 359

Query: 94  IRVVELSQCVIQNTQMQIDKIQELISAGSTLLHVTF-SLSNFKECV 139
           I VVELSQCVIQ   +   K       GST     F  L +F E V
Sbjct: 360 IGVVELSQCVIQAVPLSAKK----AGGGSTEGIAPFLQLPHFSEAV 401

[Close]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVP5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053200 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.500e-27
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 1


		  
Query: 34  VIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPA 93
           +++TQLLIQAHLTRET DLPPTLNGDLK VLELA  LLEELMKMALIPRTAQGHGWLRPA
Sbjct: 300 LVKTQLLIQAHLTRETMDLPPTLNGDLKRVLELAPRLLEELMKMALIPRTAQGHGWLRPA 359

Query: 94  IRVVELSQCVIQNTQMQIDK 114
           I VVELSQCVIQ   +   K
Sbjct: 360 IGVVELSQCVIQAVPLSAKK 379

[Close]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Match: G5DWP6_SILLA (Translocation protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.700e-26
Identity = 64/80 (80.00%), Postives = 69/80 (86.25%), Query Frame = 1


		  
Query: 34  VIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRPA 93
           +++TQLLIQAHLTRETA LPPTLNGDLK VLELA  LLEELMKMALIPRTAQGHGWLRPA
Sbjct: 300 LVKTQLLIQAHLTRETAGLPPTLNGDLKRVLELAPRLLEELMKMALIPRTAQGHGWLRPA 359

Query: 94  IRVVELSQCVIQNTQMQIDK 114
           I VVELSQC+IQ   +   K
Sbjct: 360 IGVVELSQCIIQAVPLSAKK 379

[Close]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Match: A9P7Y5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.300e-22
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+ADLPP L GD + VLELA  LLEELMKMA+IPRT+QGHGWLRP
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMKMAVIPRTSQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A  VVELSQC+IQ   +   K
Sbjct: 359 ATGVVELSQCIIQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Match: B9H3M8_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0004s07070g PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.300e-22
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+ADLPP L GD + VLELA  LLEELMKMA+IPRT+QGHGWLRP
Sbjct: 299 ALVKTELLIQAQLTRESADLPPALLGDFRRVLELAPRLLEELMKMAVIPRTSQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A  VVELSQC+IQ   +   K
Sbjct: 359 ATGVVELSQCIIQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. ExPASy Swiss-Prot
Match: DNJ21_ARATH (DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.200e-23
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+  L P L GD + VLELA  LLEEL+KMA+IPRTAQGHGWLRP
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLKMAVIPRTAQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDKIQELISAG 122
           A+ VVELSQC++Q   +   K   + S G
Sbjct: 359 AVGVVELSQCIVQAVPLSARKSSGVSSEG 387

[Close]

BLAST of Spo12555.1 vs. ExPASy Swiss-Prot
Match: DNJ29_ARATH (DnaJ protein ERDJ2B OS=Arabidopsis thaliana GN=ERDJ2B PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.000e-18
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           + I+T+LLIQ  LTRE++ L PTL  D + VLE A  LLE+L+KMA+IPR  QG GWLRP
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIKMAVIPRNEQGRGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A+ V+ELSQC++Q   +   K
Sbjct: 359 ALGVMELSQCIVQAVPLSARK 379

[Close]

BLAST of Spo12555.1 vs. TAIR (Arabidopsis)
Match: AT1G79940.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.100e-24
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           ++++T+LLIQA LTRE+  L P L GD + VLELA  LLEEL+KMA+IPRTAQGHGWLRP
Sbjct: 299 AIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLKMAVIPRTAQGHGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDKIQELISAG 122
           A+ VVELSQC++Q   +   K   + S G
Sbjct: 359 AVGVVELSQCIVQAVPLSARKSSGVSSEG 387

[Close]

BLAST of Spo12555.1 vs. TAIR (Arabidopsis)
Match: AT4G21180.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.900e-19
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 1


		  
Query: 33  SVIQTQLLIQAHLTRETADLPPTLNGDLKCVLELAHHLLEELMKMALIPRTAQGHGWLRP 92
           + I+T+LLIQ  LTRE++ L PTL  D + VLE A  LLE+L+KMA+IPR  QG GWLRP
Sbjct: 299 ATIKTELLIQKQLTRESSVLSPTLQRDFRHVLEFAPRLLEDLIKMAVIPRNEQGRGWLRP 358

Query: 93  AIRVVELSQCVIQNTQMQIDK 114
           A+ V+ELSQC++Q   +   K
Sbjct: 359 ALGVMELSQCIVQAVPLSARK 379

The following BLAST results are available for this feature:

BLAST of Spo12555.1 vs. NCBI nr
BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
BLAST of Spo12555.1 vs. ExPASy Swiss-Prot
BLAST of Spo12555.1 vs. TAIR (Arabidopsis)

BLAST of Spo12555.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902165156\|gb\|KNA07070.1\|	2.2e-27	69.8	hypothetical protein SOVF_1753...	[more]
gi\|731321905\|ref\|XP_010671598.1\|	1.1e-26	81.2	PREDICTED: dnaJ protein ERDJ2A...	[more]
gi\|118481069\|gb\|ABK92488.1\|	1.0e-21	67.9	unknown [Populus trichocarpa]	[more]
gi\|743877355\|ref\|XP_011035368.1\|	1.0e-21	67.9	PREDICTED: dnaJ protein ERDJ2A...	[more]
gi\|566165358\|ref\|XP_002305942.2\|	1.0e-21	67.9	DNAJ heat shock N-terminal dom...	[more]

BLAST of Spo12555.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QIJ4_SPIOL	1.5e-27	69.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CVP5_BETVU	7.5e-27	81.2	Uncharacterized protein OS=Bet...	[more]
G5DWP6_SILLA	1.7e-26	80.0	Translocation protein (Fragmen...	[more]
A9P7Y5_POPTR	7.3e-22	67.9	Putative uncharacterized prote...	[more]
B9H3M8_POPTR	7.3e-22	67.9	DNAJ heat shock N-terminal dom...	[more]

BLAST of Spo12555.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
DNJ21_ARATH	7.2e-23	59.5	DnaJ protein ERDJ2A OS=Arabido...	[more]
DNJ29_ARATH	7.0e-18	55.5	DnaJ protein ERDJ2B OS=Arabido...	[more]

BLAST of Spo12555.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G79940.1	4.1e-24	59.5	DnaJ / Sec63 Brl domains-conta...	[more]
AT4G21180.1	3.9e-19	55.5	DnaJ / Sec63 Brl domains-conta...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004179	Sec63 domain	PFAM	PF02889	Sec63	coord: 36..107 score: 2.
None	No IPR available	GENE3D	1.10.3380.10		coord: 25..107 score: 4.1
None	No IPR available	PANTHER	PTHR24075	FAMILY NOT NAMED	coord: 23..105 score: 1.8
None	No IPR available	PANTHER	PTHR24075:SF0	TRANSLOCATION PROTEIN SEC63 HOMOLOG	coord: 23..105 score: 1.8
None	No IPR available	unknown	SSF158702	Sec63 N-terminal domain-like	coord: 31..108 score: 4.18

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006457	protein folding
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008565	protein transporter activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18549	0.72	Barchart \| Table