Spo12560 (gene)

Overview
NameSpo12560
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCOP9 signalosome subunit 6 family protein
Locationchr6 : 9595993 .. 9606905 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTGCTCCTTAATCAAGGTTTCGGGTTTGAGCCTTGGGAATGGAAAAAATCTCAACTGGGAGGGATGCTGCCCATCGAGGTACCCATACAAACTCCCACGGGAGATTACCTCGCCGTAGGCGGTGGGAACTCCTCGTAGTAGAACAAAAAAAAAAGTAAGTAGTACAAAAGGGTATTGCTTAGGACTGTCGATGTTACAGTACGTAAATTAAGTTTATCCCTACTAGGAAAACTATTACTCCTAGTTGCCATAAAAAAAATTACAAACTTACTCCATCCATCTCTTTTTGTTCTTTACGTTTTCCTTTTTAGATGTGCCAAAATGTTCTTTACATTTTCTTTTATATTATCTCGAATTTTGATAAAAGTGAAAATCTAATATATATATATAAAGGGGAGTTTTTTGGAGAGCATTTAGAGCGTCCACGTAGGATTTTCATGTCATCATATATAATTAAATAATATTTTAGGTTTATTTTTTTAAAAAAAATACTAGAGTCTTGCCATGATTAAATTGGTATATATGATAAAGATAGATTCCAATAAAAAAATATCATTAGAGTCTTGCCATGATTAAATTGGTATATATGATAAAGATAAATACCAATAAAAACTTATCCTATTTCTCTTCTACCTTTTTGTACATATATATGAGGGAAACGTTTTTTGATGAATCATGCTTACTTTTTTTTATTCAGTTGAATAATCGTATGTGAGAGGTATATAAATCTAAAGGATGTTTAACGATAATTGCTTATGTATGGTCTAGGAGCACTGCATTTTGTAGAGCAAAATCGAAGCATAATAAGCTATGGTGTTCAAACTAATTCCACGGCAGTAGAAAGGAGATGAAAGTATAAAGATCCTACCTTCAAATTTCAGATTCCACTTCAAATTGTTGCTGAACGAGAGATTGACAGGTTTCTTATGGTATCCTCCATTTATATATCTCATATAATTCTATGGGTACAACGAAACGTCACAACTCATGCAAGTAAAAGTTCCATATGTTTTTTTTTCAAGCATGCCCATTGTACTTATTGATAATAAGTGGTGATTGTAGTTTCAGTTACATTAATAATAAGGATTCCATTTACTTTTTTAAGATCGATTACTCAACGCAGGTTCAAGATTCATCAAGAGAGTAGAAGGAGTCCTATATAAACATGTTCGTTAGCATTCTAATCGGAAGATTAAAAAAAATCATCAATATCCTCGCCTCCTGATGAGGTCCTTTTAATGTTATACGATGTTAATCATATAAAATAAAAACAATTTGTCACAATGAATTCATACTCCCTCGATAAATAAGACCACACTAGGCACATATGCTGCAATATATATCTCCATCATAAAAACTAAGCAGGTAATATTAAAGATAGCTTATCAAACCCTAAAAGATAAGAGAAAGTTATAGCTTTTGAAAATAATACAACAGGAACTAAGAAAGTTACTCACTCAAATAACCGAGCAAAAAGAATTTAAAGATACACTTGTGAGTAATTGGGCCGGGTGGTTTTAAGGTCTGATAACTACATTATTTATGATAAATAATGATGAATGAATTAAGCAATTGTGTCCAAAGTAAATACCCGGCCGAAAAATTTAGAAATGTAAATTTAAGTTTGAATCCCTTAACATTGAGTTATCTATAAATTGGTGAATGGAAATTTAATTAAAGTTGTCGATTTTCACAATTTCTGCTAAGTTATTTTTTTTTTGGTCTAATGAATCCTCATTACTATAAATATTTAACTAATATTATTCAAAATTTTAAGATAGAAATAGATAAATAAGTACCGGATAAAATATATATAAGAGATGAATTTTACTAGGAATAAAAAATATAGATAAGTACTAATTAAGTAAAAAGATAATAAGAGAAAAAGATACAAGAAGATATGATTGAAAACAAAAAGAGTTATATGAGGGATAGATCCTTCTAAGTATTTAATTTAAAAATATGAACCAAATACTTATTCTAACATAATATTTCCTAAGATAATTCTAACGTAATATATTCCTAATATTCTACACCATTGATTTTTTTTAATACTACGTTGAGCACATTATGAAAAGAAGAGAGGAGATGATATGATAACAATATTGTTATACACAAGTTCCTAACCTACATTTATACTCCAACTGGAAAAGTGAACTATTTTAAAATTTTATATAGATATACTTTATAAAACGGCTATTTGTATACAATGATATAATATATAAGACAAAAAAATATACAAAAATTGTCAAATGCACGGGCTTCAATACTAGTATTATATAAATTAATGTAATTTGCTTTGTTTAAATAAAAAGAATCTCAATGCACATTAATTAGTCGTTAAAACGCGTGTAAAAATCAAACGTAAATAACAAAAGAAACTGACGGAGTATATATTAATTTTAGTTCTCCAAATTCTCGATAGCTGGAGTTCGAATCACAGTACAAACCTACTAGTTCCCACCACTTCCCCTCCATCTCCCCTTCTTTTGCGCTTCCGCCTTCTGCTGGATTCCTGCTTCCAGAGTTCAAGGTGATCTTCAATTTCTTCATCTTCTTCGTTTTCCTGCAAAAGTTTCGACCTTTTTTTCTTCAAAAATTCGTTTCGTTAAAAATAATTTTCTGCGCTTAATTAATTAAACCTGAATTTTTAAACCTAAAACCATCGCAAATCACTTCTATTTCCCCTTTTGATTTCCCAATATCGTAATTTTCGGCAGCATTCCTACGCCAAAACCCTAACCTCCAATTTTCTCTCTCCTCTACGGTACTGCAGATATGGCGGAATCATCAAGCAGTGGGCTAACCTTCAAGCTTCATCCTTTGGTAATTCTCAACATCTCCGATCATTTTACCCGTGTCAGGTCTCAATTACAGCATCCAACACTCTCCAATGGCGGCGAACCGTGTCCCCCGCCAAGGGTTTACGGCTGTGTGATTGGTGTTCAGAAGGGAAGAACTGTTGAGATCTTCAACAGCTTTGAACTTCTCTATGATTCTGCGACCGACTCTCTTGACCGCGCCTTTCTCGAGAAGAAGCAGGAGCTTTGTGAGCCCTTTTTTCGTCAAATTGCAGTGTTTATTTGAGTTGTTTATGTGACGTTGTGAATAATCAAATTGATTTAGGGTGCTGTTTTGTGATTAATGGACAGATAAGAAGGTTTTCCCAAACTTTTATATACTAGGGTGGTATTCAACCGGGACTGATGCTCAAGAATCTGATATGCAGATACATAAAGCTGTGAGTTATTTGATGTTTCTGTTCATGTATTCATGTTTGTATTCCCTGTCCAGAGCTTGTTGTTTGAATAAATAATTGCATAATAGGGTTTGTGTCAGCTTGCGTTTTTTGTTCATTTAATTTTTGGGTTTGGCTGCTAGATAGGTGGTTAGTGTACGCTGTATTCCGTTCAAACAAAGAAAATTTAAACTCTGAACTAAATTTTATGGTCTATGGTAATCGTAACTGAAATCACTTTTCGAATTTCATGTTCTTTGTATTTGGTTCCTGGCTAGAAAAATTAGACAGGAAGAGGAGAAGAGAATGAAGGGGAGGGGAGAAGAAGAGAAGGTTTAGGCATATAGTGAATGACATTACTTTTTAATCCGTACAAGACAAATCTTGTCCACCTAGGAAAATGTTCTATTTGGTAACCAAACATAGAATTTATTTTATTTTATGGAGGTCATTCATCTTATAAGAAACTAATGCAGAACTATTCGGATAAGAAGAAAGATTTACATATGGTTTTTATTGATTTGGAGAAGGCATTGATAAGGTACCGAGGGAAGTACTTTGATGGCTTTAACAAGGAAAATAATTTTACAAAAATATATTGACATCATTAAGGACATGTGTGAGAGAGCTAGCACGAGTGTGTGGACCAATGTTGGAAAGATAGAGGAGTTTCCTATTACGATTGGAGTACATCAAAGTTCGAACTTAGCCCTTTTCTCTTTGCCATAGTAATGGATGAATTGACGAGTTCAATTCAAGATAGTATACCATGATGCATGTTGTTAGATGAATTGTGTTGGTCGATGAAACGAAAGGTGTGGAAAGTAAGTTGGAATTATGGAGACATACGTTGGAGACATACGTTGGAGACATACGTTGGAGACATACGTTGGAATCTAATGACTTTAAGTTGAGTAGAAGTAAAATAAAATATTTTGAAGTGTAAGTTTTGCGGAGGCATGGGCAATCCATTTGGATGGGAGGACCGTAGAAAGTTCAGATTTCTTGGGGAATTGGATGGAGATGTCACCCATAGAATGTTGGTTGAAGTGGAAGAGTGTTTCAGGGTTTCTATGTATTCTATGTGATCCAGGTATGCCCCATAAATGGAAGGGGAAATTGTACCGTATGACAATTAGACTTGAACTATTATATGGTATGGAATGTTGGATGTAAAGTAATGTCACATTCATAAGTTGAATGTCGCGGAGATGCGTATGTTGCGTTGAATGTGTAGCCATACAAGGAAGGATTGGTTGAGGTAATGAGGTGATTAGCAACAAAAGTGGGGCTTACACCGAATGGCAACAAAGAGGGAAAATCGACTAAGGTGGTTTAGCCATGTAAGATGGTTGCCAAATGATGCGCCGGTTAGGAGGATTAAAGAGTGGCAAACCGATGTAATTTTGAGGGTAGGAAGACCAAAGCAAACATGGAAGAGGGTGATTGAGAGTGACATGAGTTTATTAGGGATTGAGAGTGACATGAGTTTATTAGGGATTGAGAGTGACATGAGTTTATTAGGGATTGAGGAAAATATGACGTTAGATGGAGTGGAGGAAGATAAGACATGCCGACGACTCAACATGACTTATTTTCCATTACTTTCTCTTTTTTCTATTTTCTTTGTAAACTTCTCTCGTTTTCTTTTTGTTTTCAAAACAATTTTTTCTTTTGCCTCTTTTGTAAACCGGCGGCTCATCTTGTTTTCGTATTATCTCTTTTTCGTGCCTCGTGTATACTCTCTTTAACATAACCTTTTTTTATTTCTCTTACTTCACACGGTTCCTTATGAAGGTTCATGTTAGCCTACCCCATTCATTATGGACTAAAGCTTGGTTGTTGCTGTAACCAAACAGATAAAAGTTGGAAAACTAAGTTTCTTTCTCCTAAAAGGGATTTGTGTTCCGCAAAACCGAACCTTAATCGCTTAATTCTTTCTCCTGGAAGTATTGAAGTGGTTTTCTGAATTTGTTGATGATATTGGAGTTTCTAGTACATAGGAAGAGGGAAAGAGAGGTCGTTTTGAACTCGAATATTAGCACTTATCACTCAATTGTCTGAGTTTGTTGGTGTGCTTGTATCAAACAATTTTTTGAACAGTTTGGGTAAAGCCAATATTGAAGCTGCCTTTCTGAAACATGTTGGTCATGTTCCGATGGTGTTTTACTAGCTATTCCAAGATTTAAATTATTCTGTTTGCCATTTTTTTTACGGGGATGTTTTACTCTACAGTTTGTGGTGTGTGGCTTGAGATTTCTGAGGCTATTATGTTTCTTTTCTCCCAAGTCAGTCAATTAATCTTTTGATCAGAAACATCTATCTCCATATTGTTATTGTTCAATATATTGTATCTCATTACAATATCTTTTACTAGACATCTACCGAGACCGCGGTAGAGTAGTCAAAAGTATGCAATTTGTTAATTGCAAAGAGTATCTAGTTGAAAGAGACTATCTGTTAGATCCTTGTTTTAAAAAGTCAATTCGGTGGCCTTCTTTCTCTCCCAGTGGAAACTTGAAAGAGACTGTCTGCTAATAAGACATAAAGGGTATATCTGCTTGTCTTTCTCTTGTCCTACACAGTGATACAGTAGATTCATTTTCATGTTTTTGATTTGGCAATTGGACAACGGTGCTCAAATTGCTTTCTAAGAGTTGGGTTAATCCTCTGGTAGTTTTTTAATAACCTAAAAAGCACCATTTTGGGGTTAACTGTTGTTGTTGAGTTTATAAGATGTCTGCCCTCAAAAGCATGCATGTGTCCAGTACCATCGACACTTTATTTCTCCACCTGTAAATGTTGATTGTGGTACTGTTACAGCTGATGGATATCAACGAGAGTCCTATTTATGTCCTACTCCATCCTTCCATTAATCATGCACAAAAGGATCTTCCAGTCAGCATCTTCGAAAATGGTATGTTTGATTTCTCCCAGCCATTTCCTCCACTTGTGTAGCATGCTGATGTGAACTTGAGTTTTCAGTCCCCCCTTTTCTTTAATGATTTAAAGACCATGTTGGACATCGCTTTTGTTTTATCTTTGTGAATTGTGATTTTCTTATATTTCCTTTATGTTTTAAATGATTTGGTGTAGAAATAATGCCTAAAAGTTATCTCCCTTGGTTATATTGTGCCGCCTTTTGCTATTTTTTCCAAACAGTCCAGTGTTGCATACATTGACAATGAAATATTGTTACCTTGCAGATGTTTGGTACGTTTGAATAGGAATTTGGGATTTTGGGGAATAGAGTGTGAGATTGGAATGAGAATTTGTTGGTGGGAATTCCTTGATATCTTGTTTGGGTAGTGATGAGAAATAAATTAGGAATACATTACAAACTTACCCAAACGCCCTTATAATACAATTCATCTTTCTTATTCATTAATGACATTTTGGATATTTCTCAATTCCCTTCATCAATTCCCACCCCTCCCTTGGGAATAAAATCATGGAATTGAAAATTTGAAATCAACATTTCCGATTCCCAAACCCATTTTCGTTTCCCATTCCTCCCTAGCAAACATGGGGAATGGACCAAGTTAGGAAATAAATGTTCATTCCCAAGTCCACATTTCCTACTAAACAAACACACTCTTGAGGTAGTCTGGAATACTTAAAACGACGAATTTTGTGCACTTGAAATTGGATTAGCCCTTGCACCAAGAAGTGATTACTAATGTGTGTGAAATGATTTTCCCGGATGTTTCTCATGGCATTAAAATGGATACAGGTGTTTGTGAATGATTAGATTTTCCCCTTGTTTAGGGAAACAATTTGGTATAGCTCTGCTATGAGATCTCTGTCTCATTGCTGTCCTTAACTTTTCTACATTAATTACTTGTTGTCTAGTATTGAAGAGATACCAAACCACCGGGGTTGCCATCATTATCTGCCTTTTTCTTTCATAACTTCTGAGAAGTTGTCTTATGAGAGTGTTAGAGCATCTCCATTGGTAAACTATATGGTGTTGTTGTTTGGATTGTCGCATAGTATTTTGAAGCTACAAACTCTCCAATGGTGAGCTACAACACTTTGTAGCTTGCAAAATAAAAAACAAAATAAATATTCTTTTAGTACAATTTTCATAATTTACTTGGAGCTATTTTTTTCAAGCATAACAACTTGCAAGCTAAATATCTTTTTTGTTCTCCAATGGTAAGCTTGTAGCTACATATTTTTAAAGCAACTCCAGTGGATATTGCTTGCAATAAAAATAAAACGTGTAGCTACAAGCTTACCATTCAAGAACAAAAAAGTTGTAGTTTGCATGCGATTGTAGCTTAAACAAGCTACATGCTTGATAGAAAAACTTCAGTTAAACTATGACAATTGCACTACAATTTTTTATATGTAAGTATTTTACTTTACAAACTACAAAGTGTTGAAGTCCACCATTGAAGAAGTTTCTAGCTTCAAAATGTTGTAGCTTCAACATATGATGTAGCAATCCAAACTACAACACCTTGTAGTTTACCATTGGAGGTCTGTGCTAAGAGATTCAAACTCTGAAGTTAGTGTTTGTTGGGTCAATGTACGAGACCAATGCAAAGGAATTGTAATTTGCATGATATGGAAAGCGTCTGTTTGGACATGTATGTTACGTTCTCAACTGAAGAGATAATACTATCTTATTAGTTGGTTTCAGTGATGTTCTACTTTCAAGGGAAATGGTCTATTTGCTGATTTCGTCCAGTTAGGATTGCTTTACTTCTTATCCTCCCTTGTCTGGTCTATCGGTAAGAGCTATATTGGTTGTGGTAGATTTGGTTATCGTTAATGATAATGCAGATTCTTACTTGATTGTAACCTGAGTTTATTGCTTGGTTGTCCCTTGAACTAGACATATCTCAGCTTGGACTAAGAAATCAAGATTTGTATCACTTCCAGGTTGCAGCTTGTGGCAAGGCGATGCCTTTTTTCCCCTACCTGACCTTGTTTAATTGTTGTGATTGTTAAATTTCAGAACTGCATGTTATTGATGGTCTTCCACAACTAACCTTTGTTCGTTCGAGCTACACCATTGAGGTATGATATATCCCTGCTTCACTTCTCCCTTTCCTGGTATCTCTGTAACGGTCTCGGCATATTTATGCTGCATGACTGAGTCGTTCTTTTTATTTTCTTGAAGACAGTTGAAGCGGAAAGGATCTCAGTTGACCATGTTGCACATCTTAAACCAGCTGATGGTGGTTCTGCTGCCACCCAATGTGAGCTCAGCTGCTTAATTTCCCTTCTGAAAAATAAATAAAACTGAAGTGGACAGGTGTTTTAATTTCTGCGTTTCACAAATTGTGTTTTGTATGCAGTGGCTGCTCATTTGACTGGTATTCACAGTGCAATAAAGATGTTGAATAGTCGAGTGAAAGTGCTGCTCCAATATCTTTCTTCTATGCAGAAAGGTAACTTATCTGTTCATCGGTTTATCCATTACCTTGAAACCTTATTTAAGATGGGCTGTGTGACAGTGTTTGTTATACAACTAGTTCTATTTAGTGATCTAGGATGAAGCATGTCCTTGGCTTTAGTAGAATTTGATATTCCGTGACCGATAATTTAACAGCAGAACTATATATTTGTTCTGTTCACCAATTGGCCATACAGTTCATACGTTGTTCAATACATTCCTGATAAGCTGCAAGTCTAACAATATCAAATTTTTACATCACTTTTGGGAATATGAACAGGCTTACTGTGTCATCATGTTAGCATGAAAAAGTGAGATGAGACGCATAGTATAGTTTGACTCGTGTGGCTGACTAATTAACATGGTCTGTAATTGCTTTCATTTTTCATTGCAGGTGAAATTCCTTGCGAGAATTCACTGTTGAGAGAAGTTTCAAGTCTTCTGCGGAGATTACCAGCTATTGAATCTGGGAAATTTCAAGATGATTTTCTGATGGTGAGTACTCTGTCTTTATTGGCAGCTTAAAGGATTGTGAATATACTTTTTCTCTTGGAGATATGAAATTTTTTACTTATCTTTTAGTCATCTACGGGATTCGTATTTATGCAAAAAGAGTTATCTGAGTTAGGGATCTTTCTTTTACAGGAATACAACGACACCATTCTGGTTACCTATCTTGCCATGTTGACTAACTGCTCAAGGTAATGGACATTCAGAATTAAGCCTTCTTCTGATTGAACCCCTTATTTCTCTTTTTGGGTCAGTCCAGTTATGACTAGTTTTGAAGACGTGCTTACTTTTCCATCTACAGATCTACCTACCGAACAACTGTTGCTATTATGTCTAGCAATGTTTCGAGCTTTCTATGTTTTATTTTTTGGCAATAAATATTTTTACATTACCACTATGGATTCTTTTACTTGATAGCCTTTTATGTGCTAACCATATACAAAGTAGTTGTGTACACCTTGAATTCTCTAGATCTGATATTCGATAATACGAGTAGGTGTTATTGTCTGTTTCTCCTTTACCTGATCTCTTTCGTTGCAATCTGACCATTCAGCGAGGTCTCTTGTGTACACCTTGAATTCTCTAGATCTGATATTCGATAATACGAGTAGGTGTTATTGTCTGTTTCTCCTTTACCTGATCTCTTTCGTTGCAATCTGACCATTCAGCGAGGTCTCTTTGAATTTGTCATTTTTGGGTGAGTGGACATATTCTTTACTTGGCTGTTGCTCCTAACATAGGAAGGCTGTTGCCATTTCCACGGGATTCTCATGACCTTATTTTAACGCAGGTAAGACTGTGGGAAGGCTTTTATAGTAGTCGTAAAGCGACTGTATATTTTTTTGGGATACTAATGTCGGTCAATATACAAATTGTTGATGTGTAATTTGATTAGATTAAATAGGACTGAACTTGTTTTAGATTCTTGTTCTATTTCATGTCTAAATTTTCTTATTTTGCATGAATGTTAAGCCTAATTTTTGGTTCTTCTATGCAGTACGATGAGCGAGCTTGTCGACAAAATCAACATTGCATACGACAGGCACAGTAGAAGGGGAGGACGGACTGCTTTTATATGAGCCTATCAGCACCATTAACCACAACCATCTTTCCAGTTGGAGCCGAGTTTTTGATTCTGAAGCTGATTTTCTGGATCAGGAATTTTGGTATCTTTGATTAAAGAAAAATGCGGCAAATCAAAAGTAGATTGTTAGAGAAGTTAGTAACTTATTGCCTTTTGTTACAGGGTACTTCAGCAGTACATTCTCTTGTGATTTTTCGGTCTCCATTTCAGTAAAGGTGGTTTCCTGAGTTCATCATTGTGTGACTGTGTCTATGATTTTGATTTACTGTGGTGGGGAGGGCAAGTTATTGGATATTTTGTGAATATTATGGTGGAATATTATGATGGAAACGGATCAAGGAAAATTGGTGTGACTTCTCATATTTTCGCTCCATTCGTTATTTTGTCCATTGTTTTTTATTTGGAGTTGGAAAATCGGGGAGTTAGGGAAAACGGATGATAACTTTCCGAACTTCTTATTTTTATCCTAAGCTACCTAAGACGCAAGGTTGCCTGCTTAGTTCTTTGGCTTGGTTTCCATCCGTAAGGTCTCTTGCCCGGCTGTTCTCCTGGCTCATATGTTGGCTACTTTATACTCGTCGTCATCTTATTTGTCATAGGTTTTAGTTTGTCTGTTTTTTTGGTTTTTGTTTTGTTCTTCTTTGCTTTTGTTGTTCTCTTTTCTAG

mRNA sequence

ATGGCCTCTTGCTCCTTAATCAAGGTTTCGGGTTTGAGCCTTGGGAATGGAAAAAATCTCAACTGGGAGGGATGCTGCCCATCGAGAGTTCAAGATATGGCGGAATCATCAAGCAGTGGGCTAACCTTCAAGCTTCATCCTTTGGTAATTCTCAACATCTCCGATCATTTTACCCGTGTCAGGTCTCAATTACAGCATCCAACACTCTCCAATGGCGGCGAACCGTGTCCCCCGCCAAGGGTTTACGGCTGTGTGATTGGTGTTCAGAAGGGAAGAACTGTTGAGATCTTCAACAGCTTTGAACTTCTCTATGATTCTGCGACCGACTCTCTTGACCGCGCCTTTCTCGAGAAGAAGCAGGAGCTTTATAAGAAGGTTTTCCCAAACTTTTATATACTAGGGTGGTATTCAACCGGGACTGATGCTCAAGAATCTGATATGCAGATACATAAAGCTCTGATGGATATCAACGAGAGTCCTATTTATGTCCTACTCCATCCTTCCATTAATCATGCACAAAAGGATCTTCCAGTCAGCATCTTCGAAAATGAACTGCATGTTATTGATGGTCTTCCACAACTAACCTTTGTTCGTTCGAGCTACACCATTGAGACAGTTGAAGCGGAAAGGATCTCAGTTGACCATGTTGCACATCTTAAACCAGCTGATGGTGGTTCTGCTGCCACCCAATTGGCTGCTCATTTGACTGGTATTCACAGTGCAATAAAGATGTTGAATAGTCGAGTGAAAGTGCTGCTCCAATATCTTTCTTCTATGCAGAAAGGTGAAATTCCTTGCGAGAATTCACTGTTGAGAGAAGTTTCAAGTCTTCTGCGGAGATTACCAGCTATTGAATCTGGGAAATTTCAAGATGATTTTCTGATGGAATACAACGACACCATTCTGGTTACCTATCTTGCCATGTTGACTAACTGCTCAAGTACGATGAGCGAGCTTGTCGACAAAATCAACATTGCATACGACAGGCACAGTAGAAGGGGAGGACGGACTGCTTTTATATGAGCCTATCAGCACCATTAACCACAACCATCTTTCCAGTTGGAGCCGAGTTTTTGATTCTGAAGCTGATTTTCTGGATCAGGAATTTTGGTATCTTTGATTAAAGAAAAATGCGGCAAATCAAAAGTAGATTGTTAGAGAAGTTAGTAACTTATTGCCTTTTGTTACAGGGTACTTCAGCAGTACATTCTCTTGTGATTTTTCGGTCTCCATTTCAGTAAAGGTGGTTTCCTGAGTTCATCATTGTGTGACTGTGTCTATGATTTTGATTTACTGTGGTGGGGAGGGCAAGTTATTGGATATTTTGTGAATATTATGGTGGAATATTATGATGGAAACGGATCAAGGAAAATTGGTGTGACTTCTCATATTTTCGCTCCATTCGTTATTTTGTCCATTGTTTTTTATTTGGAGTTGGAAAATCGGGGAGTTAGGGAAAACGGATGATAACTTTCCGAACTTCTTATTTTTATCCTAAGCTACCTAAGACGCAAGGTTGCCTGCTTAGTTCTTTGGCTTGGTTTCCATCCGTAAGGTCTCTTGCCCGGCTGTTCTCCTGGCTCATATGTTGGCTACTTTATACTCGTCGTCATCTTATTTGTCATAGGTTTTAGTTTGTCTGTTTTTTTGGTTTTTGTTTTGTTCTTCTTTGCTTTTGTTGTTCTCTTTTCTAG

Coding sequence (CDS)

ATGGCCTCTTGCTCCTTAATCAAGGTTTCGGGTTTGAGCCTTGGGAATGGAAAAAATCTCAACTGGGAGGGATGCTGCCCATCGAGAGTTCAAGATATGGCGGAATCATCAAGCAGTGGGCTAACCTTCAAGCTTCATCCTTTGGTAATTCTCAACATCTCCGATCATTTTACCCGTGTCAGGTCTCAATTACAGCATCCAACACTCTCCAATGGCGGCGAACCGTGTCCCCCGCCAAGGGTTTACGGCTGTGTGATTGGTGTTCAGAAGGGAAGAACTGTTGAGATCTTCAACAGCTTTGAACTTCTCTATGATTCTGCGACCGACTCTCTTGACCGCGCCTTTCTCGAGAAGAAGCAGGAGCTTTATAAGAAGGTTTTCCCAAACTTTTATATACTAGGGTGGTATTCAACCGGGACTGATGCTCAAGAATCTGATATGCAGATACATAAAGCTCTGATGGATATCAACGAGAGTCCTATTTATGTCCTACTCCATCCTTCCATTAATCATGCACAAAAGGATCTTCCAGTCAGCATCTTCGAAAATGAACTGCATGTTATTGATGGTCTTCCACAACTAACCTTTGTTCGTTCGAGCTACACCATTGAGACAGTTGAAGCGGAAAGGATCTCAGTTGACCATGTTGCACATCTTAAACCAGCTGATGGTGGTTCTGCTGCCACCCAATTGGCTGCTCATTTGACTGGTATTCACAGTGCAATAAAGATGTTGAATAGTCGAGTGAAAGTGCTGCTCCAATATCTTTCTTCTATGCAGAAAGGTGAAATTCCTTGCGAGAATTCACTGTTGAGAGAAGTTTCAAGTCTTCTGCGGAGATTACCAGCTATTGAATCTGGGAAATTTCAAGATGATTTTCTGATGGAATACAACGACACCATTCTGGTTACCTATCTTGCCATGTTGACTAACTGCTCAAGTACGATGAGCGAGCTTGTCGACAAAATCAACATTGCATACGACAGGCACAGTAGAAGGGGAGGACGGACTGCTTTTATATGA

Protein sequence

MASCSLIKVSGLSLGNGKNLNWEGCCPSRVQDMAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSRRGGRTAFI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12560.1Spo12560.1mRNA


Homology
[Close]
BLAST of Spo12560.1 vs. NCBI nr
Match: gi|902221649|gb|KNA18960.1| (hypothetical protein SOVF_065350 [Spinacia oleracea])

HSP 1 Score: 615.1 bits (1585), Expect = 7.100e-173
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 92
           MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR
Sbjct: 1   MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 60

Query: 93  TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA 152
           TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA
Sbjct: 61  TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA 120

Query: 153 LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS 212
           LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS
Sbjct: 121 LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS 180

Query: 213 VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR 272
           VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR
Sbjct: 181 VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR 240

Query: 273 EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR 332
           EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR
Sbjct: 241 EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR 300

Query: 333 RGGRTAFI 341
           RGGRTAFI
Sbjct: 301 RGGRTAFI 308
[Close]
BLAST of Spo12560.1 vs. NCBI nr
Match: gi|731349970|ref|XP_010686267.1| (PREDICTED: COP9 signalosome complex subunit 6a-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 572.0 bits (1473), Expect = 6.900e-160
Identity = 286/310 (92.26%), Postives = 298/310 (96.13%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPP--PRVYGCVIGVQK 92
           MA SSSSGLTFKLHPLVILNISDHFTRV+SQLQHP+ SNGGEP P   PRVYGCVIGVQ+
Sbjct: 1   MAASSSSGLTFKLHPLVILNISDHFTRVKSQLQHPSHSNGGEPSPAHSPRVYGCVIGVQR 60

Query: 93  GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIH 152
           GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDA+ESDM IH
Sbjct: 61  GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAEESDMHIH 120

Query: 153 KALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAER 212
           KALMDINESP+YVLLHPSINHAQKDLPVSI+E+ELHVI+GLPQL FVRSSYTIETVEAER
Sbjct: 121 KALMDINESPVYVLLHPSINHAQKDLPVSIYESELHVIEGLPQLIFVRSSYTIETVEAER 180

Query: 213 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSL 272
           ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRV+VLLQYL SMQKGEIPCENSL
Sbjct: 181 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVRVLLQYLVSMQKGEIPCENSL 240

Query: 273 LREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRH 332
           LR+VSSLLRRLPAIESGKFQDDFLMEYNDT+LVTYLAMLTNCSS M+ELVDKIN AYDRH
Sbjct: 241 LRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLVTYLAMLTNCSSAMNELVDKINTAYDRH 300

Query: 333 SRRGGRTAFI 341
            RRGGRTAFI
Sbjct: 301 GRRGGRTAFI 310
[Close]
BLAST of Spo12560.1 vs. NCBI nr
Match: gi|225463552|ref|XP_002267156.1| (PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera])

HSP 1 Score: 537.0 bits (1382), Expect = 2.500e-149
Identity = 267/317 (84.23%), Postives = 293/317 (92.43%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLS-NGGE--------PCPPPRVYG 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV+SQ Q P LS NGGE        P PPPRV+G
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIGVQ+GRTVEIFNSFELLYD +T SLDR+FLEKKQELYKKVFPNFYILGWYSTG+DAQ
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQ 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+PSINHAQKDLPV+I+E+ELHVIDG+PQL FVR++YTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVRANYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL  YL +MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
           IPCENSLLR+VSSLLRRLPAIESGKFQDDFLMEYNDT+L++YLAM TNCSSTM+ELVDK 
Sbjct: 241 IPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMNELVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYDRHSRRGGRTAFI
Sbjct: 301 NTAYDRHSRRGGRTAFI 317
[Close]
BLAST of Spo12560.1 vs. NCBI nr
Match: gi|1009107791|ref|XP_015881485.1| (PREDICTED: COP9 signalosome complex subunit 6a [Ziziphus jujuba])

HSP 1 Score: 526.6 bits (1355), Expect = 3.300e-146
Identity = 263/325 (80.92%), Postives = 289/325 (88.92%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHP-TLSNGGEPC--------------- 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV+SQ+  P T +NG +                 
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMHPPLTATNGADGVDNTSSSPSSSSSSPS 60

Query: 93  --PPPRVYGCVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILG 152
             PPPRVYGCVIG+Q+GRTVEIFNSFELLYD +T SLDRAFLEKKQELYKKVFP+FYILG
Sbjct: 61  RSPPPRVYGCVIGIQRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILG 120

Query: 153 WYSTGTDAQESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQL 212
           WYSTG+DAQESDM IHKALMDINESP+YVLL+PSINHAQKDLPV+IFE+ELHVIDG+PQL
Sbjct: 121 WYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIFESELHVIDGIPQL 180

Query: 213 TFVRSSYTIETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQ 272
            FVR+SYTIETVEAERISVDHVAHLKP+DGGSAATQLAAHLTG HSAIKMLNSR++VL  
Sbjct: 181 IFVRASYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGTHSAIKMLNSRIRVLHH 240

Query: 273 YLSSMQKGEIPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSS 332
           YL SMQKG+IPCENSLLR+VSSLLRRLPAIESGKFQDDFLMEYNDT+L+TYLAM TNCSS
Sbjct: 241 YLLSMQKGDIPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMFTNCSS 300

Query: 333 TMSELVDKINIAYDRHSRRGGRTAF 340
           +M+ELVDK N AYDRHSRRGGRTAF
Sbjct: 301 SMNELVDKFNTAYDRHSRRGGRTAF 325
[Close]
BLAST of Spo12560.1 vs. NCBI nr
Match: gi|1012179800|ref|XP_015967866.1| (PREDICTED: COP9 signalosome complex subunit 6a-like [Arachis duranensis])

HSP 1 Score: 526.2 bits (1354), Expect = 4.300e-146
Identity = 261/308 (84.74%), Postives = 286/308 (92.86%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 92
           MA SSSSGLTFK+HPLVI+NISDH+TRV+SQL  P  SN       PRVYG VIGVQKGR
Sbjct: 1   MASSSSSGLTFKVHPLVIVNISDHYTRVKSQLNPPN-SNASSNSSAPRVYGGVIGVQKGR 60

Query: 93  TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA 152
           TVEIFNSFELLYDS+T SLDRAFLEKKQELYKKVFP+FYILGWYSTGTDA ESDM IHKA
Sbjct: 61  TVEIFNSFELLYDSSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGTDAHESDMHIHKA 120

Query: 153 LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS 212
           LMDINESP+YVLL+PSINH+Q+DLPV+IFE+ELHVIDG+PQL FVRSSYTIETVEAERIS
Sbjct: 121 LMDINESPVYVLLNPSINHSQRDLPVTIFESELHVIDGIPQLIFVRSSYTIETVEAERIS 180

Query: 213 VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR 272
           VDHVAHLKP+DGGSAATQLAAHLTGIHSAIKML+SR+KVL  YL +MQKG++PCENSLLR
Sbjct: 181 VDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLLR 240

Query: 273 EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR 332
           +VSSLLRRLPAIESGKFQDDFLMEYNDT+L++YLAMLTNCSSTM+ELVDK N AYDRHSR
Sbjct: 241 QVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSTMNELVDKFNTAYDRHSR 300

Query: 333 RGGRTAFI 341
           RGGRTAF+
Sbjct: 301 RGGRTAFM 307
[Close]
BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065350 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 4.900e-173
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 92
           MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR
Sbjct: 1   MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 60

Query: 93  TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA 152
           TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA
Sbjct: 61  TVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKA 120

Query: 153 LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS 212
           LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS
Sbjct: 121 LMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERIS 180

Query: 213 VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR 272
           VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR
Sbjct: 181 VDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLR 240

Query: 273 EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR 332
           EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR
Sbjct: 241 EVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSR 300

Query: 333 RGGRTAFI 341
           RGGRTAFI
Sbjct: 301 RGGRTAFI 308
[Close]
BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g181420 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 4.800e-160
Identity = 286/310 (92.26%), Postives = 298/310 (96.13%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPP--PRVYGCVIGVQK 92
           MA SSSSGLTFKLHPLVILNISDHFTRV+SQLQHP+ SNGGEP P   PRVYGCVIGVQ+
Sbjct: 1   MAASSSSGLTFKLHPLVILNISDHFTRVKSQLQHPSHSNGGEPSPAHSPRVYGCVIGVQR 60

Query: 93  GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIH 152
           GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDA+ESDM IH
Sbjct: 61  GRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAEESDMHIH 120

Query: 153 KALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAER 212
           KALMDINESP+YVLLHPSINHAQKDLPVSI+E+ELHVI+GLPQL FVRSSYTIETVEAER
Sbjct: 121 KALMDINESPVYVLLHPSINHAQKDLPVSIYESELHVIEGLPQLIFVRSSYTIETVEAER 180

Query: 213 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSL 272
           ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRV+VLLQYL SMQKGEIPCENSL
Sbjct: 181 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVRVLLQYLVSMQKGEIPCENSL 240

Query: 273 LREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRH 332
           LR+VSSLLRRLPAIESGKFQDDFLMEYNDT+LVTYLAMLTNCSS M+ELVDKIN AYDRH
Sbjct: 241 LRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLVTYLAMLTNCSSAMNELVDKINTAYDRH 300

Query: 333 SRRGGRTAFI 341
            RRGGRTAFI
Sbjct: 301 GRRGGRTAFI 310
[Close]
BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Match: D7UAV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01950 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 1.700e-149
Identity = 267/317 (84.23%), Postives = 293/317 (92.43%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLS-NGGE--------PCPPPRVYG 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV+SQ Q P LS NGGE        P PPPRV+G
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIGVQ+GRTVEIFNSFELLYD +T SLDR+FLEKKQELYKKVFPNFYILGWYSTG+DAQ
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQ 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+PSINHAQKDLPV+I+E+ELHVIDG+PQL FVR++YTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVRANYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL  YL +MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
           IPCENSLLR+VSSLLRRLPAIESGKFQDDFLMEYNDT+L++YLAM TNCSSTM+ELVDK 
Sbjct: 241 IPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMNELVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYDRHSRRGGRTAFI
Sbjct: 301 NTAYDRHSRRGGRTAFI 317
[Close]
BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Match: A0A067K375_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19231 PE=4 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 3.900e-146
Identity = 261/316 (82.59%), Postives = 285/316 (90.19%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGE--------PCPPPRVYGC 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV+SQ+  P  SN             PPPRVYGC
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPVTSNNNSNGSGVAPAQAPPPRVYGC 60

Query: 93  VIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQE 152
           VIGVQ+GRTVEIFNSFELLYD  + SLDR FLEKKQELYKKVFP+FYILGWYSTG+DA+E
Sbjct: 61  VIGVQRGRTVEIFNSFELLYDPISHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEE 120

Query: 153 SDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIE 212
           SDM IHKALMDINESP+YVLL+PSIN AQKDLPV+I+E+ELHVIDG+PQL FVRSSYTIE
Sbjct: 121 SDMHIHKALMDINESPVYVLLNPSINPAQKDLPVTIYESELHVIDGIPQLIFVRSSYTIE 180

Query: 213 TVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEI 272
           TVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL  YL++MQKGEI
Sbjct: 181 TVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLAAMQKGEI 240

Query: 273 PCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKIN 332
           PCENSLLR+VSSLLRRLPAIES KFQDDFLMEYNDT+L+TYLAM TNCSSTM+ELVDK N
Sbjct: 241 PCENSLLRQVSSLLRRLPAIESEKFQDDFLMEYNDTLLITYLAMFTNCSSTMNELVDKFN 300

Query: 333 IAYDRHSRRGGRTAFI 341
            AYDRHSRRGGRTAFI
Sbjct: 301 TAYDRHSRRGGRTAFI 316
[Close]
BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Match: B9ST91_RICCO (Signalosome subunit, putative OS=Ricinus communis GN=RCOM_0364210 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 6.700e-146
Identity = 264/318 (83.02%), Postives = 287/318 (90.25%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHP--TLSNGGEP--------CPPPRVY 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV+SQ+  P  T +NGG            PPRVY
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPVTTTTNGGSDGGGENTVSLAPPRVY 60

Query: 93  GCVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDA 152
           GCVIGVQ+GRTVEIFNSFELLYD  T SLDRAFLEKKQELYKKVFP+FYILGWYSTG+DA
Sbjct: 61  GCVIGVQRGRTVEIFNSFELLYDPITHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDA 120

Query: 153 QESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYT 212
           +ESDM IHKALMDINESP+YVLL+PSIN AQKDLPV I+E+ELHVIDG+PQL FVRSSYT
Sbjct: 121 EESDMHIHKALMDINESPVYVLLNPSINPAQKDLPVIIYESELHVIDGIPQLIFVRSSYT 180

Query: 213 IETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKG 272
           IETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL  YL++MQKG
Sbjct: 181 IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLAAMQKG 240

Query: 273 EIPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDK 332
           EIPCENSLLR+VSSLLRRLPAIES KFQDDFLMEYNDT+L+TYLAM TNCSSTM+ELVDK
Sbjct: 241 EIPCENSLLRQVSSLLRRLPAIESEKFQDDFLMEYNDTLLITYLAMFTNCSSTMNELVDK 300

Query: 333 INIAYDRHSRRGGRTAFI 341
            N AYDRHSRRGGRTAFI
Sbjct: 301 FNTAYDRHSRRGGRTAFI 318
[Close]
BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Match: CSN6A_ARATH (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana GN=CSN6A PE=1 SV=2)

HSP 1 Score: 492.7 bits (1267), Expect = 3.300e-138
Identity = 243/317 (76.66%), Postives = 282/317 (88.96%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTL-------SNGGEPC--PPPRVYG 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV++QL  P         SN GE      PRVYG
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIGVQ+GRTVEIFNSFELLYD +T +LDR+FLEKKQELYKKVFP+FYILGWYSTG+DA+
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+P+INH QKDLPV+I+E+ELHVIDG+PQL F  +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIFAHTSYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL Q L++MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
             C+NS+LR+VSSLLRRLPA+ES +FQD+FLMEYND +L+TYLAM+TNCSS M+E+VDK 
Sbjct: 241 KSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITNCSSNMNEMVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYDR++RRGGRTAF+
Sbjct: 301 NTAYDRNTRRGGRTAFM 317
[Close]
BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Match: CSN6B_ARATH (COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana GN=CSN6B PE=1 SV=2)

HSP 1 Score: 485.3 bits (1248), Expect = 5.300e-136
Identity = 238/317 (75.08%), Postives = 278/317 (87.70%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLS----NGGEPCPP-----PRVYG 92
           MA SSSSGLTFKLHPLV+LNISDHFTRV++QL  P  S    NG           PRVYG
Sbjct: 1   MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIG+Q+GRTVEIFNSFEL++D A D+LDR+FLEKKQELYKKVFP+FY+LGWYSTG+DA 
Sbjct: 61  CVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDAT 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+P+INHAQKDLPV+I+E+E HVIDG+PQ  FV +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIFVHTSYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL Q++ +MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
            PCENS+LR+VSSLLR LPA ES KF ++FLMEYND +L++YLAM+TNC+S M+E+VDK 
Sbjct: 241 KPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYD+HSRRGGRTAF+
Sbjct: 301 NTAYDKHSRRGGRTAFM 317
[Close]
BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Match: CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum GN=csn6 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.900e-65
Identity = 131/300 (43.67%), Postives = 200/300 (66.67%), Query Frame = 1 

		  

Query: 36  SSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGRTVE 95
           ++SSGL   LHPLV++NISDHFTR + Q      SN  + C   RV G ++GVQ GR VE
Sbjct: 21  ANSSGLEVDLHPLVLINISDHFTRTKVQ------SNYQDNC---RVIGVILGVQNGRNVE 80

Query: 96  IFNSFELLYDSATDSL--DRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKAL 155
           I NSFE++Y +    L  D  +L KK   Y+++FP + +LGWYSTG+   + D+ +HK +
Sbjct: 81  ICNSFEMVYATVDKQLVLDIEYLRKK---YEQLFPLYDLLGWYSTGSQVSKDDILLHKQI 140

Query: 156 MDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAERISV 215
            + NESP+Y++L    +   KDLPV I+E+ELH+++  P   FV++ Y I+T EAERI V
Sbjct: 141 SEHNESPLYLMLDTD-SPKSKDLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEAERIGV 200

Query: 216 DHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLRE 275
           +H+A + P+  GS  + L +HL  +H+AI MLN RVK L  YL ++++  +P E ++LR+
Sbjct: 201 NHIAKVTPS--GSEGSGLTSHLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQNILRK 260

Query: 276 VSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDRHSRR 334
            SSL  +LP I++  F+  +L EYND +LVTYLA +T  S+++++ +DK  ++ ++ S+R
Sbjct: 261 ASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASITKTSASLNDTIDKYLVSNEKQSKR 305
[Close]
BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Match: CSN6_PONAB (COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.900e-61
Identity = 124/299 (41.47%), Postives = 184/299 (61.54%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 92
           MA   +  ++  LHPLVILNISDH+ R+RSQ   P            +V G +IG Q+GR
Sbjct: 32  MASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPV-----------QVIGALIGKQEGR 91

Query: 93  TVEIFNSFELLYDSATDSL--DRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIH 152
            +E+ NSFELL  +  + +  D+ +   K+E +K+VF     LGWY+TG     SD+ +H
Sbjct: 92  NIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVH 151

Query: 153 KALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAER 212
           K + +I ESP+++ L+P   H   DLPVS+FE+ + +I+G   + F   +YT+ T EAER
Sbjct: 152 KQVCEIIESPLFLKLNPMTKHT--DLPVSVFESVIDIINGEATMLFAELTYTLATEEAER 211

Query: 213 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSL 272
           I VDHVA +     G  +T +A HL   HSAIKML+SRVK++L+Y+ + + GE+P  + +
Sbjct: 212 IGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEI 271

Query: 273 LREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDR 330
           LRE  +L   LP + + KF+ DF  + ND  L+ YL  +T   +TM++ V+K N+ YDR
Sbjct: 272 LREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDR 316
[Close]
BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Match: CSN6_MOUSE (COP9 signalosome complex subunit 6 OS=Mus musculus GN=Cops6 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.500e-61
Identity = 124/299 (41.47%), Postives = 184/299 (61.54%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGR 92
           MA   +  ++  LHPLVILNISDH+ R+RSQ   P            +V G +IG Q+GR
Sbjct: 28  MASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPM-----------QVIGALIGKQEGR 87

Query: 93  TVEIFNSFELLYDSATDSL--DRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIH 152
            +E+ NSFELL  +  + +  D+ +   K+E +K+VF     LGWY+TG     SD+ +H
Sbjct: 88  NIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVH 147

Query: 153 KALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAER 212
           K + +I ESP+++ L+P   H   DLPVS+FE+ + +I+G   + F   +YT+ T EAER
Sbjct: 148 KQVCEIIESPLFLKLNPMTKHT--DLPVSVFESVIDIINGEATMLFAELTYTLATEEAER 207

Query: 213 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSL 272
           I VDHVA +     G  +T +A HL   HSAIKML+SRVK++L+Y+ + + GE+P  + +
Sbjct: 208 IGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEI 267

Query: 273 LREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIAYDR 330
           LRE  +L   LP + + KF+ DF  + ND  L+ YL  +T   +TM++ V+K N+ YDR
Sbjct: 268 LREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDR 312
[Close]
BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Match: AT5G56280.1 (COP9 signalosome subunit 6A)

HSP 1 Score: 492.7 bits (1267), Expect = 1.900e-139
Identity = 243/317 (76.66%), Postives = 282/317 (88.96%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTL-------SNGGEPC--PPPRVYG 92
           MA SSSSGLTFKLHPLVI+NISDH+TRV++QL  P         SN GE      PRVYG
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIGVQ+GRTVEIFNSFELLYD +T +LDR+FLEKKQELYKKVFP+FYILGWYSTG+DA+
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+P+INH QKDLPV+I+E+ELHVIDG+PQL F  +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIFAHTSYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL Q L++MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
             C+NS+LR+VSSLLRRLPA+ES +FQD+FLMEYND +L+TYLAM+TNCSS M+E+VDK 
Sbjct: 241 KSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMITNCSSNMNEMVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYDR++RRGGRTAF+
Sbjct: 301 NTAYDRNTRRGGRTAFM 317
[Close]
BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Match: AT4G26430.1 (COP9 signalosome subunit 6B)

HSP 1 Score: 485.3 bits (1248), Expect = 3.000e-137
Identity = 238/317 (75.08%), Postives = 278/317 (87.70%), Query Frame = 1 

		  

Query: 33  MAESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLS----NGGEPCPP-----PRVYG 92
           MA SSSSGLTFKLHPLV+LNISDHFTRV++QL  P  S    NG           PRVYG
Sbjct: 1   MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYG 60

Query: 93  CVIGVQKGRTVEIFNSFELLYDSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQ 152
           CVIG+Q+GRTVEIFNSFEL++D A D+LDR+FLEKKQELYKKVFP+FY+LGWYSTG+DA 
Sbjct: 61  CVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDAT 120

Query: 153 ESDMQIHKALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTI 212
           ESDM IHKALMDINESP+YVLL+P+INHAQKDLPV+I+E+E HVIDG+PQ  FV +SYTI
Sbjct: 121 ESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIFVHTSYTI 180

Query: 213 ETVEAERISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGE 272
           ETVEAERISVDHVAHLKP+DGGSAATQLAAHLTGIHSAIKMLNSR++VL Q++ +MQKG+
Sbjct: 181 ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGD 240

Query: 273 IPCENSLLREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKI 332
            PCENS+LR+VSSLLR LPA ES KF ++FLMEYND +L++YLAM+TNC+S M+E+VDK 
Sbjct: 241 KPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVDKF 300

Query: 333 NIAYDRHSRRGGRTAFI 341
           N AYD+HSRRGGRTAF+
Sbjct: 301 NTAYDKHSRRGGRTAFM 317
[Close]
BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein)

HSP 1 Score: 102.4 bits (254), Expect = 5.500e-22
Identity = 71/286 (24.83%), Postives = 135/286 (47.20%), Query Frame = 1 

		  

Query: 45  LHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGRTVEIFNSFELLY 104
           +HPLV+L+I DH+ RV                   RV G ++G     TV++ NS+ + +
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSK-------------RVVGVLLGSSSRGTVDVTNSYAVPF 78

Query: 105 -----DSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKALMDINES 164
                D++   LD  + E    ++K++    +I+GWYSTG   +E+D+ +H        +
Sbjct: 79  EEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPN 138

Query: 165 PIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLT---FVRSSYTIETVEAERISVDHV 224
           P+ V++   +   +  +P   +     V +   Q +   FV     I   E E I V+H+
Sbjct: 139 PVLVII--DVQPKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHL 198

Query: 225 AH-LKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLREVS 284
              +K     + AT++ A L    +A+K L++R++ +  YL  + +G++P  + +L  + 
Sbjct: 199 LRDVKDTTISTLATEVTAKL----TALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQ 258

Query: 285 SLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVD 322
            +   LP +   +    F ++ ND +LV YL+ L      +  L++
Sbjct: 259 DVFNLLPNLNVNELVKAFAVKTNDMMLVIYLSSLIRSVIALHSLIN 285
[Close]
BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Match: AT5G05780.1 (RP non-ATPase subunit 8A)

HSP 1 Score: 100.9 bits (250), Expect = 1.600e-21
Identity = 70/286 (24.48%), Postives = 134/286 (46.85%), Query Frame = 1 

		  

Query: 45  LHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIGVQKGRTVEIFNSFELLY 104
           +HPLV+L+I DH+ RV                   RV G ++G      V++ NS+ + +
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSK-------------RVVGVLLGSSSRGVVDVTNSYAVPF 78

Query: 105 -----DSATDSLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIHKALMDINES 164
                D +   LD  + E    ++K++    +++GWYSTG   +E+D+ +H        +
Sbjct: 79  EEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPN 138

Query: 165 PIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLT---FVRSSYTIETVEAERISVDHV 224
           P+ V++   +   +  +P   +     V +   Q +   FV  S  I   E E I V+H+
Sbjct: 139 PVLVII--DVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHL 198

Query: 225 AH-LKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSLLREVS 284
              +K     + AT++ A L    +A+K L++R++ +  YL  + +G++P  + +L  + 
Sbjct: 199 LRDVKDTTISTLATEVTAKL----TALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQ 258

Query: 285 SLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVD 322
            +   LP +   +    F ++ ND +LV YL+ L      +  L++
Sbjct: 259 DVFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 285
[Close]
BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Match: AT2G39990.1 (eukaryotic translation initiation factor 2)

HSP 1 Score: 80.1 bits (196), Expect = 2.900e-15
Identity = 70/296 (23.65%), Postives = 131/296 (44.26%), Query Frame = 1 

		  

Query: 34  AESSSSGLTFKLHPLVILNISDHFTRVRSQLQHPTLSNGGEPCPPPRVYGCVIG-VQKGR 93
           A +++S LT ++HPLVI N+ D F R               P    RV G ++G +    
Sbjct: 19  ASATTSVLTARIHPLVIFNVCDCFVR--------------RPDSAERVIGTLLGSILPDG 78

Query: 94  TVEIFNSFELLYDSATD--SLDRAFLEKKQELYKKVFPNFYILGWYSTGTDAQESDMQIH 153
           TV+I NS+ + ++ ++D  ++D  +       + KV     I+GWYSTG         IH
Sbjct: 79  TVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIH 138

Query: 154 KALMDINESPIYVLLHPSINHAQKDLPVSIFENELHVIDGLPQLTFVRSSYTIETVEAER 213
                   +PI++ +     + +  +   +  N L + D      F      +  V+AER
Sbjct: 139 DFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSN-LSLGDRQLVAHFQEIPVDLRMVDAER 198

Query: 214 ISVDHVAHLKPADGGSAATQLAAHLTGIHSAIKMLNSRVKVLLQYLSSMQKGEIPCENSL 273
           +  D +         ++  +L   L G+   ++ L + +  + +Y+ S+  G+I  +N++
Sbjct: 199 VGFDVLK-------ATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNI 258

Query: 274 LREVSSLLRRLPAIESGKFQDDFLMEYNDTILVTYLAMLTNCSSTMSELVDKINIA 327
            R ++  +  LP +    F +       D +L+ YL+ +T    T   L +K+N A
Sbjct: 259 GRFIADAVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITR---TQLSLAEKLNTA 289
The following BLAST results are available for this feature:
BLAST of Spo12560.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902221649|gb|KNA18960.1|7.1e-173100.hypothetical protein SOVF_0653... [more]
gi|731349970|ref|XP_010686267.1|6.9e-16092.2PREDICTED: COP9 signalosome co... [more]
gi|225463552|ref|XP_002267156.1|2.5e-14984.2PREDICTED: COP9 signalosome co... [more]
gi|1009107791|ref|XP_015881485.1|3.3e-14680.9PREDICTED: COP9 signalosome co... [more]
gi|1012179800|ref|XP_015967866.1|4.3e-14684.7PREDICTED: COP9 signalosome co... [more]
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BLAST of Spo12560.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RHK5_SPIOL4.9e-173100.Uncharacterized protein OS=Spi... [more]
A0A0J8ENA5_BETVU4.8e-16092.2Uncharacterized protein OS=Bet... [more]
D7UAV8_VITVI1.7e-14984.2Putative uncharacterized prote... [more]
A0A067K375_JATCU3.9e-14682.5Uncharacterized protein OS=Jat... [more]
B9ST91_RICCO6.7e-14683.0Signalosome subunit, putative ... [more]
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BLAST of Spo12560.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CSN6A_ARATH3.3e-13876.6COP9 signalosome complex subun... [more]
CSN6B_ARATH5.3e-13675.0COP9 signalosome complex subun... [more]
CSN6_DICDI2.9e-6543.6COP9 signalosome complex subun... [more]
CSN6_PONAB1.9e-6141.4COP9 signalosome complex subun... [more]
CSN6_MOUSE2.5e-6141.4COP9 signalosome complex subun... [more]
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BLAST of Spo12560.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G56280.11.9e-13976.6COP9 signalosome subunit 6A[more]
AT4G26430.13.0e-13775.0COP9 signalosome subunit 6B[more]
AT3G11270.15.5e-2224.8Mov34/MPN/PAD-1 family protein[more]
AT5G05780.11.6e-2124.4RP non-ATPase subunit 8A[more]
AT2G39990.12.9e-1523.6eukaryotic translation initiat... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 39..159
score: 3.0
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 42..186
score: 1.
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 207..321
score: 2.3
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 19..336
score: 2.0E
NoneNo IPR availablePANTHERPTHR10540:SF8COP9 SIGNALOSOME COMPLEX SUBUNIT 6coord: 19..336
score: 2.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0018279 protein N-linked glycosylation via asparagine
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0048367 shoot system development
biological_process GO:0045489 pectin biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0047484 regulation of response to osmotic stress
biological_process GO:0009909 regulation of flower development
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0009651 response to salt stress
biological_process GO:0006364 rRNA processing
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0016458 gene silencing
biological_process GO:0008283 cell proliferation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006306 DNA methylation
biological_process GO:0001510 RNA methylation
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006897 endocytosis
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006457 protein folding
biological_process GO:0000338 protein deneddylation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0034968 histone lysine methylation
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009640 photomorphogenesis
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005886 plasma membrane
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0030132 clathrin coat of coated pit
cellular_component GO:0030130 clathrin coat of trans-Golgi network vesicle
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005657 replication fork
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005768 endosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0042555 MCM complex
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005488 binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003678 DNA helicase activity
RNA-Seq Expression