Spo12570 (gene)

Overview
NameSpo12570
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRotundifolia-like protein
LocationSpoScf_02686 : 22634 .. 23077 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTATGATGATCAAGACTTCTACTCGTCATCATCTTCAGATAAGAAATGGAAAAAATTCAAGAAGGAATCCTCATCAAGATCATCATCGTCGTCAATGCCGATAGACTCCTCACTAATGCGAAGCTATTCAGCTAAAAACACCGCACCAAAGTCACCTCCATTCCTTAGAAGTTACTCCCAAAAACCATCCTCCAATAATCATCATAATAATAATAATAATAATAATAAGCTATCTAGAAGTTCCTCAATGAAGAGCTCATGCCCGTCTTCACCGTCGTCATCCAAGAACAAATCCAACCTTATGAGAAGCTTCTCCAAGAAAAGCTCCGCGTTTGGTAAGAAATGTACGCATTTAGCTAAGGAGCAAAAAGCCCGATTCTACATCATGAAGAGGTGTGTTTCCATGCTTGTTAGCTGGCCTAAAAAGGGTGATTCTTAA

mRNA sequence

ATGGGGTATGATGATCAAGACTTCTACTCGTCATCATCTTCAGATAAGAAATGGAAAAAATTCAAGAAGGAATCCTCATCAAGATCATCATCGTCGTCAATGCCGATAGACTCCTCACTAATGCGAAGCTATTCAGCTAAAAACACCGCACCAAAGTCACCTCCATTCCTTAGAAGTTACTCCCAAAAACCATCCTCCAATAATCATCATAATAATAATAATAATAATAATAAGCTATCTAGAAGTTCCTCAATGAAGAGCTCATGCCCGTCTTCACCGTCGTCATCCAAGAACAAATCCAACCTTATGAGAAGCTTCTCCAAGAAAAGCTCCGCGTTTGGTAAGAAATGTACGCATTTAGCTAAGGAGCAAAAAGCCCGATTCTACATCATGAAGAGGTGTGTTTCCATGCTTGTTAGCTGGCCTAAAAAGGGTGATTCTTAA

Coding sequence (CDS)

ATGGGGTATGATGATCAAGACTTCTACTCGTCATCATCTTCAGATAAGAAATGGAAAAAATTCAAGAAGGAATCCTCATCAAGATCATCATCGTCGTCAATGCCGATAGACTCCTCACTAATGCGAAGCTATTCAGCTAAAAACACCGCACCAAAGTCACCTCCATTCCTTAGAAGTTACTCCCAAAAACCATCCTCCAATAATCATCATAATAATAATAATAATAATAATAAGCTATCTAGAAGTTCCTCAATGAAGAGCTCATGCCCGTCTTCACCGTCGTCATCCAAGAACAAATCCAACCTTATGAGAAGCTTCTCCAAGAAAAGCTCCGCGTTTGGTAAGAAATGTACGCATTTAGCTAAGGAGCAAAAAGCCCGATTCTACATCATGAAGAGGTGTGTTTCCATGCTTGTTAGCTGGCCTAAAAAGGGTGATTCTTAA

Protein sequence

MGYDDQDFYSSSSSDKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNNNNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRCVSMLVSWPKKGDS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12570.1Spo12570.1mRNA


Homology
[Close]
BLAST of Spo12570.1 vs. NCBI nr
Match: gi|870853328|gb|KMT05209.1| (hypothetical protein BVRB_7g173540 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 179.1 bits (453), Expect = 5.600e-42
Identity = 110/147 (74.83%), Postives = 121/147 (82.31%), Query Frame = 1 

		  

Query: 1   MGYDDQDFYSSSSSDKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSY 60
           M Y+DQDFYSSSS DKK K FKKE S     SS+ +DSSLMRS+S KN+A KSPPFLRS+
Sbjct: 1   MAYEDQDFYSSSS-DKKRKLFKKEVSR----SSLTVDSSLMRSFSQKNSASKSPPFLRSF 60

Query: 61  SQKPSSNNHHNNNNNNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHL 120
           SQKPSS           KLSRSSS+KSSCPSSP+SSKNKSNLMR+FSKKSS+FGKKCT+L
Sbjct: 61  SQKPSS-----------KLSRSSSLKSSCPSSPTSSKNKSNLMRNFSKKSSSFGKKCTNL 120

Query: 121 AKEQKARFYIMKRCVSMLVSWPKKGDS 148
           AKEQKARFYIMKRCVSMLVSW K GDS
Sbjct: 121 AKEQKARFYIMKRCVSMLVSWRKNGDS 131
[Close]
BLAST of Spo12570.1 vs. NCBI nr
Match: gi|590589141|ref|XP_007016365.1| (ROTUNDIFOLIA like 4, partial [Theobroma cacao])

HSP 1 Score: 91.7 bits (226), Expect = 1.200e-15
Identity = 69/133 (51.88%), Postives = 80/133 (60.15%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE+S    SSS    SSL RS+S K+ + KSP                    
Sbjct: 50  DEKWKISKKEASGIHCSSSSSKFSSLTRSFSTKSISSKSP-------------------- 109

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS KSSC SS SSSK    L RSFS+KSS+  +KC+ LAKEQKARFYIM+RC
Sbjct: 110 ----LLRSSSQKSSCSSSSSSSKYP--LPRSFSQKSSSISRKCSSLAKEQKARFYIMRRC 156

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 170 VAMLVCWHKHGDS 156
[Close]
BLAST of Spo12570.1 vs. NCBI nr
Match: gi|802563617|ref|XP_012066989.1| (PREDICTED: putative protein TPRXL [Jatropha curcas])

HSP 1 Score: 88.6 bits (218), Expect = 1.000e-14
Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE SS SSSS        +RS+S K+++    P L S S             
Sbjct: 2   DEKWKPSKKEGSSSSSSS-------FVRSFSTKSSSSSKSPLLSSSS------------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS+KSS PS+     NK  L RS+S+K+S+  +KC+ LAKEQKARFYIM+RC
Sbjct: 62  ----LKRSSSLKSSSPSN-----NKCPLPRSYSQKNSSISRKCSSLAKEQKARFYIMRRC 105

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 122 VAMLVCWHKHGDS 105
[Close]
BLAST of Spo12570.1 vs. NCBI nr
Match: gi|357472831|ref|XP_003606700.1| (rotundifolia-like protein [Medicago truncatula])

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-13
Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE SS +SS+   + S   RS S + ++  SP  L+S+SQK SS        
Sbjct: 2   DEKWKLSKKEKSSNTSSTKSSLFS---RSCSTRGSSSNSPLLLKSFSQKSSS-------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
                               +S N  NL RS+S+K+ + GKKCT++AKEQKARFYIM+RC
Sbjct: 62  --------------------TSNNSGNLSRSYSQKNPSIGKKCTNIAKEQKARFYIMRRC 102

Query: 135 VSMLVSWPKKGD 147
           V+MLV W K GD
Sbjct: 122 VAMLVCWHKHGD 102
[Close]
BLAST of Spo12570.1 vs. NCBI nr
Match: gi|823230685|ref|XP_012448065.1| (PREDICTED: uncharacterized protein LOC105771200 [Gossypium raimondii])

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-13
Identity = 65/133 (48.87%), Postives = 79/133 (59.40%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE+S    SSS     SL RS+S K+ + KSP                    
Sbjct: 2   DEKWKLSKKEASGTHCSSSSKF--SLPRSFSTKSISSKSP-------------------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS K+SC SS SSS +K  L RS+S+K+S   +KC+ LAKEQKARFYIM+RC
Sbjct: 62  ----LLRSSSQKNSCSSSSSSSSSKCALPRSYSQKTS-ISRKCSSLAKEQKARFYIMRRC 107

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 122 VAMLVCWHKHGDS 107
[Close]
BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYY8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g173540 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.900e-42
Identity = 110/147 (74.83%), Postives = 121/147 (82.31%), Query Frame = 1 

		  

Query: 1   MGYDDQDFYSSSSSDKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSY 60
           M Y+DQDFYSSSS DKK K FKKE S     SS+ +DSSLMRS+S KN+A KSPPFLRS+
Sbjct: 1   MAYEDQDFYSSSS-DKKRKLFKKEVSR----SSLTVDSSLMRSFSQKNSASKSPPFLRSF 60

Query: 61  SQKPSSNNHHNNNNNNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHL 120
           SQKPSS           KLSRSSS+KSSCPSSP+SSKNKSNLMR+FSKKSS+FGKKCT+L
Sbjct: 61  SQKPSS-----------KLSRSSSLKSSCPSSPTSSKNKSNLMRNFSKKSSSFGKKCTNL 120

Query: 121 AKEQKARFYIMKRCVSMLVSWPKKGDS 148
           AKEQKARFYIMKRCVSMLVSW K GDS
Sbjct: 121 AKEQKARFYIMKRCVSMLVSWRKNGDS 131
[Close]
BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Match: A0A061H013_THECC (ROTUNDIFOLIA like 4 (Fragment) OS=Theobroma cacao GN=TCM_041800 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.200e-16
Identity = 69/133 (51.88%), Postives = 80/133 (60.15%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE+S    SSS    SSL RS+S K+ + KSP                    
Sbjct: 50  DEKWKISKKEASGIHCSSSSSKFSSLTRSFSTKSISSKSP-------------------- 109

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS KSSC SS SSSK    L RSFS+KSS+  +KC+ LAKEQKARFYIM+RC
Sbjct: 110 ----LLRSSSQKSSCSSSSSSSKYP--LPRSFSQKSSSISRKCSSLAKEQKARFYIMRRC 156

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 170 VAMLVCWHKHGDS 156
[Close]
BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Match: A0A067L1G2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02962 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.000e-15
Identity = 64/133 (48.12%), Postives = 80/133 (60.15%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE SS SSSS        +RS+S K+++    P L S S             
Sbjct: 2   DEKWKPSKKEGSSSSSSS-------FVRSFSTKSSSSSKSPLLSSSS------------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS+KSS PS+     NK  L RS+S+K+S+  +KC+ LAKEQKARFYIM+RC
Sbjct: 62  ----LKRSSSLKSSSPSN-----NKCPLPRSYSQKNSSISRKCSSLAKEQKARFYIMRRC 105

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 122 VAMLVCWHKHGDS 105
[Close]
BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Match: G7JUW7_MEDTR (Rotundifolia-like protein OS=Medicago truncatula GN=MTR_4g064520 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-13
Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE SS +SS+   + S   RS S + ++  SP  L+S+SQK SS        
Sbjct: 2   DEKWKLSKKEKSSNTSSTKSSLFS---RSCSTRGSSSNSPLLLKSFSQKSSS-------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
                               +S N  NL RS+S+K+ + GKKCT++AKEQKARFYIM+RC
Sbjct: 62  --------------------TSNNSGNLSRSYSQKNPSIGKKCTNIAKEQKARFYIMRRC 102

Query: 135 VSMLVSWPKKGD 147
           V+MLV W K GD
Sbjct: 122 VAMLVCWHKHGD 102
[Close]
BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QCJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G097500 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-13
Identity = 65/133 (48.87%), Postives = 79/133 (59.40%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           D+KWK  KKE+S    SSS     SL RS+S K+ + KSP                    
Sbjct: 2   DEKWKLSKKEASGTHCSSSSKF--SLPRSFSTKSISSKSP-------------------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRC 134
               L RSSS K+SC SS SSS +K  L RS+S+K+S   +KC+ LAKEQKARFYIM+RC
Sbjct: 62  ----LLRSSSQKNSCSSSSSSSSSKCALPRSYSQKTS-ISRKCSSLAKEQKARFYIMRRC 107

Query: 135 VSMLVSWPKKGDS 148
           V+MLV W K GDS
Sbjct: 122 VAMLVCWHKHGDS 107
[Close]
BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Match: AT2G29125.1 (ROTUNDIFOLIA like 2)

HSP 1 Score: 75.5 bits (184), Expect = 3.100e-14
Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNNN 74
           ++KWK  KK++++ SSSS     S   RS+S   ++ KSP F+RS               
Sbjct: 2   EEKWKLSKKDTTASSSSSK----SKFSRSFSTSASSTKSPIFVRS--------------- 61

Query: 75  NNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKK--------SSAFGKKCTHLAKEQKA 134
                   SS K S PSS SSS + S++ RSFS+K        SS+  +K + LAKEQKA
Sbjct: 62  --------SSTKCSVPSSSSSSSSSSSISRSFSRKERRSSSSSSSSITQKYSSLAKEQKA 115

Query: 135 RFYIMKRCVSMLVSWPKKGDS 148
           RFYIM+RCV+MLV W K GDS
Sbjct: 122 RFYIMRRCVAMLVCWHKHGDS 115
[Close]
BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Match: AT5G59510.1 (ROTUNDIFOLIA like 5)

HSP 1 Score: 64.3 bits (155), Expect = 7.100e-11
Identity = 56/121 (46.28%), Postives = 75/121 (61.98%), Query Frame = 1 

		  

Query: 25  SSSRSSSSSMPIDSSLMRSYSAKNTAPKS--PPFLRSYSQKPSSNNHHNNNNNNNKLSRS 84
           S+  SSSSS P+     RS+S K T+  S  P F RS+S KP+S+        +  LSRS
Sbjct: 32  STKTSSSSSKPV---FTRSFSTKPTSYSSSEPIFRRSFSAKPTSSK-------SPFLSRS 91

Query: 85  SSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKRCVSMLVSWP 144
            S K  CP   SS+ +K ++ RS S+K ++  +KC ++AKE K+RFYIMKRCV MLV W 
Sbjct: 92  GSTK--CPVDTSST-SKCSISRSLSQKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWH 139
[Close]
BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Match: AT1G07490.1 (ROTUNDIFOLIA like 3)

HSP 1 Score: 57.8 bits (138), Expect = 6.700e-9
Identity = 52/130 (40.00%), Postives = 70/130 (53.85%), Query Frame = 1 

		  

Query: 15  DKKWKKFKKESSSRS-SSSSMPIDSSLMRSYSAKNTAPKSPPFLRSYSQKPSSNNHHNNN 74
           D+KW+  KK++ + S SSSS    S   RS+S   ++ K+P F+RS              
Sbjct: 2   DEKWRLSKKDALAASCSSSSTSSKSKFSRSFSTSASSSKAPAFVRS-------------- 61

Query: 75  NNNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQKARFYIMKR 134
                    SS K S PSS SSS ++S    S  K+  +  +K + LAKEQK RFYIM+R
Sbjct: 62  ---------SSTKCSVPSSSSSSISRS----SSKKEKGSITQKYSSLAKEQKGRFYIMRR 104

Query: 135 CVSMLVSWPK 144
           CV+MLV W K
Sbjct: 122 CVAMLVCWHK 104
[Close]
BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Match: AT3G46613.1 (ROTUNDIFOLIA like 4)

HSP 1 Score: 51.6 bits (122), Expect = 4.800e-7
Identity = 58/138 (42.03%), Postives = 73/138 (52.90%), Query Frame = 1 

		  

Query: 9   YSSSSSDKKWKKFKKESSSRSSSSSMPIDSSLMRSYSAKNTAPKSPP---FLRSYSQKPS 68
           +SSSS     K F   S S  +SSS    S   RS+S K ++  S     F RS+S KP 
Sbjct: 21  FSSSS-----KPFFTRSFSTKTSSSPSSKSHFTRSFSTKPSSSSSSSDLIFRRSFSAKPK 80

Query: 69  SNNHHNNNNNNNKLSRSSSMKSSCPSSPSSSKNKSNLMRSFSKKSSAFGKKCTHLAKEQK 128
           ++        +  LSRS S KSS   S  SS    +L R  SKK ++   KC  +AKE K
Sbjct: 81  TSK-------SLLLSRSCSTKSSADLSSKSS----SLSRILSKKGASVTGKCFKVAKEHK 140

Query: 129 ARFYIMKRCVSMLVSWPK 144
           +RFYI+KRCV MLV W K
Sbjct: 141 SRFYIIKRCVLMLVCWHK 142
[Close]
BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Match: AT2G36985.1 (DVL family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.800e-6
Identity = 17/29 (58.62%), Postives = 27/29 (93.10%), Query Frame = 1 

		  

Query: 113 FGKKCTHLAKEQKARFYIMKRCVSMLVSW 142
           FG+KC+H+ K+Q+A+FYI++RC++MLV W
Sbjct: 15  FGQKCSHVVKKQRAKFYILRRCIAMLVCW 43
The following BLAST results are available for this feature:
BLAST of Spo12570.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|870853328|gb|KMT05209.1|5.6e-4274.8hypothetical protein BVRB_7g17... [more]
gi|590589141|ref|XP_007016365.1|1.2e-1551.8ROTUNDIFOLIA like 4, partial [... [more]
gi|802563617|ref|XP_012066989.1|1.0e-1448.1PREDICTED: putative protein TP... [more]
gi|357472831|ref|XP_003606700.1|1.4e-1343.9rotundifolia-like protein [Med... [more]
gi|823230685|ref|XP_012448065.1|1.4e-1348.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo12570.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8BYY8_BETVU3.9e-4274.8Uncharacterized protein OS=Bet... [more]
A0A061H013_THECC8.2e-1651.8ROTUNDIFOLIA like 4 (Fragment)... [more]
A0A067L1G2_JATCU7.0e-1548.1Uncharacterized protein OS=Jat... [more]
G7JUW7_MEDTR1.0e-1343.9Rotundifolia-like protein OS=M... [more]
A0A0D2QCJ8_GOSRA1.0e-1348.8Uncharacterized protein OS=Gos... [more]
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BLAST of Spo12570.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12570.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G29125.13.1e-1443.2ROTUNDIFOLIA like 2[more]
AT5G59510.17.1e-1146.2ROTUNDIFOLIA like 5[more]
AT1G07490.16.7e-940.0ROTUNDIFOLIA like 3[more]
AT3G46613.14.8e-742.0ROTUNDIFOLIA like 4[more]
AT2G36985.11.8e-658.6DVL family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 122..140
score: 2.9
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 72..147
score: 1.5
NoneNo IPR availablePANTHERPTHR33102:SF3DVL13-RELATEDcoord: 72..147
score: 1.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0051082 unfolded protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo060220.68Barchart | Table
Spo254530.68Barchart | Table
Spo256330.68Barchart | Table
Spo224360.67Barchart | Table
Spo123630.66Barchart | Table
Spo218330.66Barchart | Table