Spo12589 (gene)

Overview
NameSpo12589
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02449 : 33259 .. 36046 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGTTAATTTCTATATTTTTGGAAGGAAAATAGAAATTAGCTTCACTATTACTATGCGTATGTTCTAATTATCTTTGTGTATGTTCTATTTATCTTTGTGTATGTTCTATATAAAACATGCATTGTTTTTCTTGAATATTTTGTTAAAAACCTATTAGCTCAAATGGTAGAGCAATGTGTCATTGCACATGGATATAGGTTCAAATCCTACATAGGTTGTTGAGAACACACAACTTAGCTCCAATGTATTTATAGGGATAGGTCCTATGTAGTGTCACAACTGAACCCACCGAGTCGTGGAGGTGATAACGCGGTAGCCATTACAGTTGGAAATACCGGTAGTTTTAGTAACATGCTAGTTTCGAACTCAACTCAACTTATAGATACTTTTTGGTTGTTTGAGCTTGTAGTTTGTTGCAAGGCCGAAGTGTTTTTTATTTGATCTTGTAGCTTAAGTTTTATATAATTTTAGTTACATTTTAAGCCTTTTTCAGTTTTTGTCCATGTTCTAAAAAGTCAAGTCTTGTGTTCTAAATTTTGTTGCATATGTTCCAAAACTTAAGAGAAATGATAATTCACATTTCAATAATAATAAAAATGCAACTATTGAAATAATTAACCTCTTTTCTTTTAAAAGTTGAAATATAATGCAATTCAAAATTTCCAATTAAGCGTTGCTTATGTTTTAAATCTTTGTGACTTCATGTTCTAAAAACTAAGTCCAATGTTCTAAAAATTTATACATATGTTCTAAAGTAAATAAAACTGATTCAAAAATAAAGAATCATCAAATAGAAGAATTAACATCATAAACGCAATACAAAGAACGAGTTGCCTATGTAGGATTCGAACCTACATCATTGTGCAATTGCACAAAGCTCTACCAATTGAGCTAATAGGCATTACTTGCATGTTTGGTACACCTCAAAAGATAGTGGTTTTTCAACGGTAGGCTAGGCGCAGGGCGTTTCAGCTTCAAGCAATCTATTGGATAATGAGGGTATGGAAGGAAAAGGGGACCTGAGGGAAGGTAAGGCGTACAACATGAAGAGGGGGAGAGAGAAGGGGAGTGCCTTCGCACCAAAAACATGGTCACGTGATATGCTAGACTATTAGACCAGAGGCGAAACTATCTTAAGTTTGGTCTAGGGGTAATTGAATAATGCATCTGCCCATCAACGCTGAAGCAAGGCTGCATCAATAAACTCTCAAAAGATACACGACCAGACTGATGGCATTGAAAAAAACTCATACAACCATGAAGGCAAAAAATACTAAACACTGAAACAAGATTTCCAAAATAAGAACAGGAAAGGGACCTCTGGTACCATAAAAAAGAACAACACTTTATAAGGAGTGTCAAATTTTACAGAATACCTCAACTATCTGATCAACAACGTCAACCAACAAAATTCACCACTTTTGGACCTTGCTTCTTCTTTACCTTCGCGTGATTCTGGTTTTTCTCAGATGCTGGATCACTTTCAGAATTCTTAGAGTCGTCCTCCATCATGAAGTCATCCTCAAGATCGTCCCCACTATATCTTAGTAACATTTGATTGCGACTGCTCTAGTGTAGATACTGAAGAAATATGAAGCAACATCAAAATTTAGAAGTTGTGGTGGGATGATGCAGATGAACATCGCAGAAAAAATGAATTTTTTTTTGAAATCTTAAATTAGCAAAACAAGGTGTAGTTCTCACCATCAATCTATCAGGAGCACAAACACTAGCAAGCACGTCGACGTGTGTGTAGAGAGATTAAGAGAGAAAGCGAGAAAGGGAAGCATTGAGAACAGTTAGGCGAGCCCATGATGACCTGCTACAAAACTGCAATCATATTATTCTGTGTTAGAATTTCATCAGGGGAACTTTATCATAACTAACCAATCTGATTTTTTTCTGTGTTATGGGTTTGACCGTCTGCTTCTTGGGCTTATGCTCTTGATGGTGGACCAGTAGGAAACTCCCTAGCACCACTTGATCATTTGAGGAGAGAGAAATATGAGTCTATTTTTGTATTCAAACACATCAAATTAAATAAATATGACCCTGAAGTATGTTCTAAATTTTAATCCTTATGTTCTAAAGAATAAACTATTATGTTCTAAAAAATAAACTATTATGGTCGAAAAAGTGCTTCTGCTAACGCTACATGTTTGAATTTTACAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGATACCAAAAAGAGAACCGGAATCATTGATCTATATACGCATTCAAATTGCACGCCTTGCTTTATTTAAAGCTAACTCAATTAAATTAGAACATCACGTTATATAATTTAGAACATCATGTTATATAATTTAGAACATACAAATATCCAGAATTTTATTTCATTTAATTACAGAAACTCTCTAAAAATTT

mRNA sequence

ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGATACCAAAAAGAGAACCGGAATCATTGATCTATATACGCATTCAAATTGCACGCCTTGCTTTATTTAAAGCTAACTCAATTAAATTAGAACATCACGTTATATAATTTAGAACATCATGTTATATAATTTAGAACATACAAATATCCAGAATTTTATTTCATTTAATTACAGAAACTCTCTAAAAATTT

Coding sequence (CDS)

ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGA

Protein sequence

MNVCISMEFCFFLIEDYSIYKLYICSRIWFISFWIRSYSHDGGLHEESTSGREEKTLKQSRDEMPPPASVQVQGKNNRMSLMQWDLYRQQHFSSELPILPQLCLLFPLKDLFPTERESCRDVFSFYHLPLHKFLFLLSLSFI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12589.1Spo12589.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo12589.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12589.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12589.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo12589.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009644 response to high light intensity
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006810 transport
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0006979 response to oxidative stress
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0030091 protein repair
biological_process GO:0006886 intracellular protein transport
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0061025 membrane fusion
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
biological_process GO:0010200 response to chitin
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process GO:0016310 phosphorylation
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0006769 nicotinamide metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0032940 secretion by cell
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0008152 metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0009630 gravitropism
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0006486 protein glycosylation
biological_process GO:0006816 calcium ion transport
biological_process GO:0009555 pollen development
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0005983 starch catabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0048767 root hair elongation
cellular_component GO:0009507 chloroplast
cellular_component GO:0048046 apoplast
cellular_component GO:0005768 endosome
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005730 nucleolus
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0008233 peptidase activity
molecular_function GO:0019003 GDP binding
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005179 hormone activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003951 NAD+ kinase activity
molecular_function GO:0004143 diacylglycerol kinase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0005525 GTP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo172090.74Barchart | Table
Spo146670.74Barchart | Table
Spo007480.74Barchart | Table
Spo115090.73Barchart | Table
Spo132100.73Barchart | Table
Spo002830.72Barchart | Table
Spo025130.72Barchart | Table
Spo192170.71Barchart | Table
Spo020650.71Barchart | Table
Spo057810.71Barchart | Table
Spo218330.70Barchart | Table
Spo018010.70Barchart | Table
Spo097690.70Barchart | Table
Spo169960.70Barchart | Table
Spo119610.70Barchart | Table
Spo060040.70Barchart | Table
Spo168040.70Barchart | Table
Spo139050.70Barchart | Table
Spo232860.69Barchart | Table
Spo115240.69Barchart | Table
Spo256530.69Barchart | Table
Spo031950.69Barchart | Table
Spo094990.69Barchart | Table
Spo207700.68Barchart | Table
Spo146300.68Barchart | Table
Spo149420.68Barchart | Table
Spo174450.68Barchart | Table
Spo152220.68Barchart | Table
Spo008720.68Barchart | Table
Spo041040.68Barchart | Table
Spo051350.68Barchart | Table
Spo059280.68Barchart | Table
Spo014370.68Barchart | Table
Spo081140.68Barchart | Table
Spo237120.68Barchart | Table
Spo209120.68Barchart | Table
Spo104440.68Barchart | Table
Spo108640.68Barchart | Table
Spo108950.68Barchart | Table
Spo119510.68Barchart | Table
Spo192450.68Barchart | Table
Spo205440.68Barchart | Table
Spo084350.67Barchart | Table
Spo013520.67Barchart | Table
Spo036300.67Barchart | Table
Spo040820.67Barchart | Table
Spo054020.67Barchart | Table
Spo063350.67Barchart | Table
Spo096360.67Barchart | Table
Spo103160.67Barchart | Table
Spo129540.67Barchart | Table
Spo135180.67Barchart | Table
Spo158730.67Barchart | Table
Spo168010.67Barchart | Table
Spo233820.67Barchart | Table
Spo237720.67Barchart | Table
Spo240680.67Barchart | Table
Spo264300.67Barchart | Table
Spo150840.66Barchart | Table
Spo147790.66Barchart | Table
Spo270810.66Barchart | Table
Spo268580.66Barchart | Table
Spo247360.66Barchart | Table
Spo252300.66Barchart | Table
Spo006670.66Barchart | Table
Spo156300.66Barchart | Table
Spo154990.66Barchart | Table
Spo154610.66Barchart | Table
Spo137830.66Barchart | Table
Spo209520.66Barchart | Table
Spo223960.66Barchart | Table
Spo224360.66Barchart | Table
Spo228110.66Barchart | Table
Spo260130.66Barchart | Table
Spo236750.66Barchart | Table
Spo085210.66Barchart | Table
Spo139120.65Barchart | Table
Spo201870.65Barchart | Table
Spo163390.65Barchart | Table
Spo123760.65Barchart | Table
Spo097520.65Barchart | Table
Spo091410.65Barchart | Table
Spo216600.65Barchart | Table
Spo093350.65Barchart | Table