Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATACAACTAGACAGTAAGGGACGAGAGGAGTAGAAATTGACAATGATGAATGGATGATAATGTCTTTGGTTTTGCTGGTCGATGCCTCTTACAAGTAGACTATCAGAGTATCAATGCTTCATAGCTGCTCCAGATAAATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGGTTCTTTCACTCTTCCAATTTCTCTCTCGAGATTTTAATTGCTTGCGTTTTTCATGAGTTTGTTTGTTTTCTTGCAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGGTTTGTAGCAGAATATTTGCGGTACTTTTATTTTTTGATGTGATATAATTATAGGCATGGGTTTGTTTATTGAATTGCAGTCATGGTGCATATTAATCTGTTTCCTGAAATTATGTTGTTTTATATTTTTGTTTGGGTTAGAACTTAGAAACTGATTTAATATATTGGGTAGTATTGACATTGAGAGTTGAATTGTGACTGCATTGTTTCGGAACTGTCATAGATTGGCATCCAGCAAATGCTTTTTCTTTCGAAGTCAATCAATATGTTTGCTTTTAAAGTCAATCATATAGGGAGAGGTTGCGCGTCCTTTTCACTTCAAGAACCTATGTTTGATTATGGAACTCTGATTTTGGGTATAGACATTTTGGGTATATTTATCCCAAATTAGCCGAGTCTCACACCTGAACATGTATCCGTGAGCATGAGTAACTTGCTTCTCATTTTCTTAGTATGATATTTCTAAATATGATATTAAAGAGAGATAGTGCATTCTACCTAATAGTAATAGAGGGAAAGTTAACCCTGAAGTCTTTGTGAATATCTCTAACGCATCCCTTCTTAACCTCTTACCCGCGTTCCCCTATGACTTGAGTAGCCAATTTCAGAGGCTGAAAGTTAATTCTGGCAGCGGAGTTTTGCCAGTTTATGGATTGTTGAAGTCTTATTTAAATGTGTTCGTTATAGAAAAATGAACCACCTGATGAACATAATGATGCAATCCATGATATAGGATTTGTCTAACAAGTGGAAATCACAATCATTGAACTGAGGTCTGAAAGACTGCAACTAAATGGTCTGGACCTTCCAGAATTTTCTCTTGCTACCTGGTGTTTCTGATGATGGTCCTGCTTTTATCAATTTTGTAAATCAGCAGTCTCCAGAGCCTTCAAATTTTGTTGCTTAACTGTTGGGTCAAGGATCCAAATTTCTTCACATAGTGCCTGGTGGTTACAATGGATGGAACACTGCAAATTGCAAAATGTATAGAGTGGTCCAGGATCCGGAATGGCTATTTGAATATTTGCATACAGTGGGACTGAAGATTCAGAACAAAATCATGCAAATGCAAGCTGAACTCCTTTCTGAAGTTACATGAAGCCTGGTCTTATATTGAGGAGAAGGAGAATTTTTTAGAAGCAACGTCCAAGCAGATGAAAAATTGCAGCGAGATAAATCTTGATCACTTGATGTGAGGACCCATTATTTTCATGTCAAAGAGTAGCAAAATATTGAACAGAAGGGCCATTAATACGTTACTGAGAGATGTTAGGGTTAACTCTTCAGCAGCTCATTAAATCTTAAAAGATGTTATTTGATTCCATTGTTAAGGCTATAGGTGAGGGTACGGTATCAAGTAAAATAGTCTTAGATATGTTTGCAGTTACTTATTGTTCTCACCTGAATCCTCCTTATACACAAGTACGCAATGCGCACACACACAGGCACACAGATTTTCATATATCTCTGTAATGCTTGAATATTTCATTTGTTGCAACTTTTGGGAGCTGTCTTCCACAGGAATCTTATTAAAGCTTCTATCTTCCTTGACTGCATATGGTTTTACAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGTTAGCTTTCAGGACATCATTACTACAGTTTGTCTAGTTTGAATATGGTTCTAAGTGGTGACTTCTACACTTGATTTGCTGTATGTTCATGGCAGGTGAATTGATATCTATGTACTTGACAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTAATTACTTTTCACAAAGAATGATATTTCTCATGGCCTTGTGATGATTGATTAGTTCCATCATTACGGAGTCGTTGCTGTTTTTCGAAGATTGAGATGTAGTTTGATCAACTTTCTGCTTTGCCAACTTTGACAATGCTTTGAGTCATGGCTCTCTGACACAGTTGTAACATCGTTATAACAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGGTAAGATTTGGAAATTTGTCAAATGAAATACAGGCATGAAAATCTGAGAAAGTTAAAAATCTTGGCGATGTTATGCATCATATATTTTAAATCTCGCTTTCTCTTTCCTATAAGGGGATGAGGAAATGAAGTATTTTATGTGAATGTGATGAGGACTATTGGGATTAAGGCTTCGTCAACTATATCTTTGTTGTTGTTTTGTGGTAGTGTGTGTAGGAATCGTCTTCTTGTCAAAGCACATAACTTCTTATTACTTGTAAATCAAAAGGAAAAATTCAATCAACATTATACGAGTAAACATAAGCACTTCTTTACATTATACTTGGACATTAGTGCCCCTTTAAGTTATTGCTGTCATGTTCAACAACCCAAAATATAATAACAAAGGAGAAAAGAAACGAAACAAAAAAGATAGGGAAGTTCCTTTACATGGGCTTTCTGCATGTTGTTGATGTTCTTCTGTGTCATCCCTCAACCCCAACTGTATCAAAAAGGAAAAAAATGTCATCAAAGCAATTAGAAAGAAGATAAAAAAAGGAAAAGATAGAAGGAAGAAAAATAACGCTGCTTACTTTTGTGGTGCTGTCCAGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGTAAAACTACTATTCCTTCTTTTACCATAAATACCTATACATTTTTTGTATTCTGTTTTTCACTTTAAGTGTAATGGCATTGAAATATTTAATCGTCTAACTTTGATTCTTATTGTGGAGGGATTTCTTTCAGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTATCTTTTGATACCTACCTTTCTTTTAATCTATTATTTTATCAAACACCATGCGCTACTAATATGACTTTGTACCAACCGTAATTTGTGATTGCACTATATTTCGTTTTCTTGAATGGTAATCTTACATATGTAGAATATGTTGATTTCTTTTGCGTAAAGCTATTAAAAGATGTTCCTTATTCCTTGGAGCTGGGTTAGAAAGCTTGGTTGCTTTTAGATAAAGTCGCTTCAATTAGCACCTGCCAGTAAGACGGTCTTCCTTGTTAGGGAACTAAGAACAATGGCAACGTTGTTATAACGTATGCAAAGAAAGATTAAATAACGTAATAAAGAACTCATAGATTTAACGTGGTTCACTAACAATGTGTTACCACAGGCAGAGGGGAGGAAAGGTTTATTGATCTTGGAATACAGATTACAGAATGCAACTAGGTTATGATCTAGGGAGTTTATATAACACTCTCTAGATACATGCGGAAAAGCCCAGAAAATAGGTCCAAAACAGATAACCCTAGTCCAGAATAACAGATACCAGATCCCGTGCTGGGGCGTTGCAGTAAGGGGCTTGACCAATTCAAGGCATTATTCTAACAAACGTAATTCACTTCATTTAAACATTAATGAAAGTTTAGGAAAATGAAGTCAATGAACATATTGAAATTTTATCTCTAGGTGGCATATCTAATTACAAAATAGAAACATCTTTTATGCTTTGGTGAGTTTTAATATAAAAAAATACCCCTTTTAAATTTTTAACTATTTCAACATATTGCTTTTTTTAATGGGAATATTTTTTGTATAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA ATACAACTAGACAGTAAGGGACGAGAGGAGTAGAAATTGACAATGATGAATGGATGATAATGTCTTTGGTTTTGCTGGTCGATGCCTCTTACAAGTAGACTATCAGAGTATCAATGCTTCATAGCTGCTCCAGATAAATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA ATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNLVDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQDSNATQYTLM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12632.1 vs. NCBI nr
Match: gi|902238728|gb|KNA25289.1| (hypothetical protein SOVF_007920 [Spinacia oleracea]) HSP 1 Score: 444.5 bits (1142), Expect = 1.200e-121 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1
BLAST of Spo12632.1 vs. NCBI nr
Match: gi|731363075|ref|XP_010693232.1| (PREDICTED: protease Do-like 8, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 329.7 bits (844), Expect = 4.200e-87 Identity = 167/229 (72.93%), Postives = 194/229 (84.72%), Query Frame = 1
BLAST of Spo12632.1 vs. NCBI nr
Match: gi|731363077|ref|XP_010693233.1| (PREDICTED: protease Do-like 8, chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 327.4 bits (838), Expect = 2.100e-86 Identity = 168/229 (73.36%), Postives = 195/229 (85.15%), Query Frame = 1
BLAST of Spo12632.1 vs. NCBI nr
Match: gi|698588884|ref|XP_009779589.1| (PREDICTED: protease Do-like 8, chloroplastic [Nicotiana sylvestris]) HSP 1 Score: 274.2 bits (700), Expect = 2.100e-70 Identity = 147/222 (66.22%), Postives = 167/222 (75.23%), Query Frame = 1
BLAST of Spo12632.1 vs. NCBI nr
Match: gi|697178869|ref|XP_009598417.1| (PREDICTED: protease Do-like 8, chloroplastic [Nicotiana tomentosiformis]) HSP 1 Score: 271.2 bits (692), Expect = 1.800e-69 Identity = 145/223 (65.02%), Postives = 167/223 (74.89%), Query Frame = 1
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S271_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007920 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 8.200e-122 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E7Y1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046640 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.500e-86 Identity = 168/229 (73.36%), Postives = 195/229 (85.15%), Query Frame = 1
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: K4B768_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 3.000e-68 Identity = 143/216 (66.20%), Postives = 164/216 (75.93%), Query Frame = 1
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: M1A9K8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006931 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 8.900e-68 Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 1
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: M1A9K6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006931 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 8.900e-68 Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 1
BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 9.400e-63 Identity = 131/219 (59.82%), Postives = 161/219 (73.52%), Query Frame = 1
BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 2.100e-14 Identity = 67/225 (29.78%), Postives = 117/225 (52.00%), Query Frame = 1
BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3) HSP 1 Score: 67.0 bits (162), Expect = 3.200e-10 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1
BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT5G39830.1 (Trypsin family protein with PDZ domain) HSP 1 Score: 241.5 bits (615), Expect = 5.300e-64 Identity = 131/219 (59.82%), Postives = 161/219 (73.52%), Query Frame = 1
BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT3G27925.1 (DegP protease 1) HSP 1 Score: 80.9 bits (198), Expect = 1.200e-15 Identity = 67/225 (29.78%), Postives = 117/225 (52.00%), Query Frame = 1
BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT4G18370.1 (DEGP protease 5) HSP 1 Score: 67.0 bits (162), Expect = 1.800e-11 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12632.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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