Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAATAGATATTCCACAAAAATAAGCAAAAATAGAGAAAAGAGGTCTGAAATAGAAACGACACATTTCGGACCGAAATTGAAGCAATGTAATAAAGAAAGCCCATTTTCACTTTTCATCCCACATCTAAATTTGACATCATCCACCTCAACAAACGCCAGGCCACCCACCACCTACCGCTCAAATAGCAACCGCCAGCCACCGGAGCTGCCGTTGTATTAAACCAGGAAGACGGAAATTTATAGTGTTAGTTTCGTCGGAAAGCCACCCGTAATTTCAGGGATCTGAGTTTGATTCATAAATCATAATCACCGTCTTCACTCAATCCACCGCTGTTAAAGGTGATTTAGGGGGTTTGAATTATGTTGAATGACTTATTTGCGTGAATTTATAGAAAATTAATGGGGTTTCTCTCTTAGATTTGTTGATGATGGCAACGCCACCTGCCATTGCTCACTTACCACTCGCAATTTCCCCCGTCGGAAGTAGAGGTATGTTCGTATGCTTCATTTTCCTAGATAATTTTCGCGAAATGTAACTAGCTTAATCCACAATTAGCCTATGGTTAGTGCATGTGTTATGTTTGTCATACCCAATTTACTTTTATGTGATTTTCTGCTCCAAGTTATTGAATTATGTCAATGTCAGTGGAGAATTGGAGATAGCAACTGTAGCTTTGTTGTTTTGGTTTGAATTTCAATTTTGTTAATTGTGTGTATGGTTCTCATTTCTCCTAGAACAGGTTTATTTGGATCATGCAATTTTAAGGGGAGTTTCTTACTTCCTGAGCGCAGGACATCTAAGATTTCCTTATCGGGAACCCCTCAATTTCTCGGACTTGAAAATGTCAACACTTTACGTTCACATACTTTTAATGAGGTTTGTGGAATATGTCATTACACATTGTACATTGTACCATTTGTGATGTTCAGCAGCTGAATGAAGTGATAAGAACAGTTGACATTTTATGTATTTCAATTTTGCAGTTTGGGGCTTGTGATAAACATTTTTTGCGATTGAAGAGGTCAATGAAGTGTAAGAAGTTATTCCTTTAACCTTTTTGAACCTAAGCTTTGAGATGTACTTGAATGTTTATGTGCTATATCTCTGGAGCAACGACTGAAGTTGCATGTGTTTCACTGTTTCTTCATTGGTTGTTTGAAGTGGCCCTTTCATTTTTGGTGAATATTACCGTGTTTTTTATGTGATGGGGATGAACGGTATGCAGACATCACCTCATCATTGCTTGCTTTGTTTCTTATTTGCAGGCAGGACCTTGTGCTTCCAGAGTGTAGGTGCCTTTTGCCACTATATTGACCCTGCTAACAGAAGTGAGAAGTTCCAATTCGGCAGGGAACTGCACTTACTCGATCGGTCACTGAGACATATCGCAGCAAGATCAAATGTTGCTACAAGTGGCACTCCCGATTTCAGCTCCCCTTTTCCAGGTTCAGAGCCTATTTGTCTACTTCTTGCATGTTTTCATGTTGAGCATTGGTTTCTAATCGTTTTTTTGGTATTGCAGAAGCTTCTTTTGGACCCAAGGCTAGAGGCGCTTGCTTTTATGCTGTCACTTCCGTAGTCGCCCTCCTTCTCTTTGGGCTGATGGTTGTTTCTCACCCTTTTGTTCTTTTATTTGATCGATATAGAAGAAGAGCTCAGTATTTTGTTGCTAAAACGTGGGCTACTTTGACTGTCATCCCCTTCTTTAACGTGGAATTTGAGGGATTGGAGAATCTTCCTCGGCCAGATGCACCTGCTGTTTATGTTTCCAACCACCAGAGCTTCCTTGACATCTATGCTTTGCTTACTGTTGGACGGAACTTTAAGTTTATAAGCAAAACTTCCATTTTCTTATTCCCTATCATTGGATGGGCTATGTATTTTTTGGGAGTTATACCACTAAAGCGCATGGATAGTCGAAGCCAACTGGTACGCATACTTTCTTTAGTTCACAGTCCCTATTATACTGGAGGGAGTATATGTTTTATATAAAATTTGAAATTCATTCTATTTATGCCTTTGGCTCTAGGGCCCTGTCCTCTTCACCTTATTTTATCTGGAGATAAATTGTTTTTTATGGATTTAAACTTATTTGTACTAGTTCGCTGTCGTATTTTACTCCTGGAGTTTTCTTGTTGTCAACCATAAAGTGGGAATCGTACATTATTGTAAAGATGAAGTGTTGTGATTAATTGACTAGCATGTTGATTTTATCGTTCTCAGGTTTGCTGATTTTCAGCCTTTTCATCCTCGTCCTACTTGATTTTACTTGTGTATTGAAGAAGAGGAAAACCATTGGATAGATGTGACATGTGTTAGTCTAAGTTGTAATGAGAGGGAAGAACGATAGTTTTCTCTGGTTTGCATGTTATTTTGGTAGCGTACACTTGCCGATCAATTATAGAATGTTCGCCACACACTGGAAACAAATTGCATAGTTTTATTTTATGGAAGAAAATTGTCAATCATTAGTTCCAGACTTGCAGTTAATAACTGTTGACTGTGTTATATGAATGTAGGAATGTCTTAAGCGGTGTATGGATCTTATCAGGGGAGGTGCATCTGTGTTTTTTTTTCCGGAAGGAACAAGAAGTAAAGATGGGAAGTTAGGTTCTTTCAAGGTGAGATCTTTTTGCGAATTCTCTCCTGCTCTGGTGACTGTATACAATGCCTAAATGACTGTCTACCAATAACCACCAGTCTACCAGTAAAAAAATAGCCACATGTTCAGATGCTATACATTGTTGCTGATCTAATAGGGAAGCATGGGTTGATTCATCAGCCAACTTAAGAATCTTAAATTGCAGTTATTATGTGTCGTTCAGGATTTTGCGGAGGCACTTATTGATTATAACTCCGTATTATGTGTATGCTTCTGTGTTTGCAATGAAAGAATGAACCACTAGCCACGTGCTGGCTTCCTTTTTGGTACTAAACACCGTTTCATTCTTGTCTTTATAGAAAGGTGCATTCAGTGTTGCAGCAAAAACTCAAGTACCAGTTGTGCCCATGACAATAATTGGAACTGGCAGTATCATGCCTGCTGGCAAGGAGGGTTTGCTGAACCCAGGGTCTATTAAAGTTGTAATACACCCGTGTCTGGTCGGAAATGATGCGCAAGTATTGTGTAATCAAGCTCGGAGTGTTATTTCGGGTACACTTGAGCAGCAAAGCTAAGAGAATCAAGTCATAATGTACAGATTTACCTGAATCTAAACTCGCTGGACGGATAGATGTGTGACGGGAAGGTATGTGCCATGGTGCCTTGTGTGCTTGATTCCTTGGGAGTTGGGTCATCTTTTTGGCTGCAGTTGTTATGTTTGAGAAACAGTTAATTTTTTGTATTATAATAGTGTCTCACTCATATTATCTGCAGCCTTGCTGCTCAACTGTACCTTGAAAAAAAATAAGTTTCAGTCGAAATAGGTTTAGGCAAGTTCAAAATAAGTTCATATACATTCCAATGAGGCTCTAAATTAAGATATGTTCCCCCTGATGATGTTTCATTTTCGTGACTTGGAGTTATGCTCATGTCTCCAAAACTATACTTTATAAGTTTATATGTTACCTTAATAAATTCTGTTAACGCGTTTCAGAAAAATTTCATCTGGGTTGATTTGCAGAAAGGTTTTACTGGTTTATGAATTAGGTGACATGGACATTATGCAGAAGAACTTTGTAGCTTTGTTGAATATTTTAGGTGGTTTGTTGATGAGAGGGGTCTTCTTCTTACATGTAAATACCACCGATGCTGGTTTAGAACTTTAGATGTATTCTTGCTTGCTCCCTCGAAAGAGCTTTGTGCCACTTGAATAAATGTTTCTGTTTTTCTAGTTTCATGTATATGATTTAGTTTTCATATACACTTTTTGGTGCCTGATTCCATACCTGTGATTGTTTCAGGGGTGAAGAGTTAAAGACATCTTCAGAAAATAAAATACGTATGGAATGGCGTGCTGGAAATGATAGCACTTTGAGGCAAGAAATGGATTAGCAGGATAGTGATTTGGAGAAGGAAAATGTCTTTTACATGGGAGTTTTTCATCCTGTGAATAGGATTTTCTACTCAGAAATTGGCTAATTAGGCTACAAATGTATTGTAGTTACGATCGAGGGTATAACCATATAAGTATGTACAAGAGATATCTGTGTTGGTATTCTAGGAGTGTGATGTAATTGCGATTTAGGTGCAGTTTTGTGCAGAAATTGTTGGATGTTACATTTTTGTAGAAGGCATAG ATAAATAGATATTCCACAAAAATAAGCAAAAATAGAGAAAAGAGGTCTGAAATAGAAACGACACATTTCGGACCGAAATTGAAGCAATGTAATAAAGAAAGCCCATTTTCACTTTTCATCCCACATCTAAATTTGACATCATCCACCTCAACAAACGCCAGGCCACCCACCACCTACCGCTCAAATAGCAACCGCCAGCCACCGGAGCTGCCGTTGTATTAAACCAGGAAGACGGAAATTTATAGTGTTAGTTTCGTCGGAAAGCCACCCGTAATTTCAGGGATCTGAGTTTGATTCATAAATCATAATCACCGTCTTCACTCAATCCACCGCTGTTAAAGATTTGTTGATGATGGCAACGCCACCTGCCATTGCTCACTTACCACTCGCAATTTCCCCCGTCGGAAGTAGAGGCAGGACCTTGTGCTTCCAGAGTGTAGGTGCCTTTTGCCACTATATTGACCCTGCTAACAGAAGTGAGAAGTTCCAATTCGGCAGGGAACTGCACTTACTCGATCGGTCACTGAGACATATCGCAGCAAGATCAAATGTTGCTACAAGTGGCACTCCCGATTTCAGCTCCCCTTTTCCAGAAGCTTCTTTTGGACCCAAGGCTAGAGGCGCTTGCTTTTATGCTGTCACTTCCGTAGTCGCCCTCCTTCTCTTTGGGCTGATGGTTGTTTCTCACCCTTTTGTTCTTTTATTTGATCGATATAGAAGAAGAGCTCAGTATTTTGTTGCTAAAACGTGGGCTACTTTGACTGTCATCCCCTTCTTTAACGTGGAATTTGAGGGATTGGAGAATCTTCCTCGGCCAGATGCACCTGCTGTTTATGTTTCCAACCACCAGAGCTTCCTTGACATCTATGCTTTGCTTACTGTTGGACGGAACTTTAAGTTTATAAGCAAAACTTCCATTTTCTTATTCCCTATCATTGGATGGGCTATGTATTTTTTGGGAGTTATACCACTAAAGCGCATGGATAGTCGAAGCCAACTGGAATGTCTTAAGCGGTGTATGGATCTTATCAGGGGAGGTGCATCTGTGTTTTTTTTTCCGGAAGGAACAAGAAGTAAAGATGGGAAGTTAGGTTCTTTCAAGAAAGGTGCATTCAGTGTTGCAGCAAAAACTCAAGTACCAGTTGTGCCCATGACAATAATTGGAACTGGCAGTATCATGCCTGCTGGCAAGGAGGGTTTGCTGAACCCAGGGTCTATTAAAGTTGTAATACACCCGTGTCTGGTCGGAAATGATGCGCAAAAGGCATAG ATGATGGCAACGCCACCTGCCATTGCTCACTTACCACTCGCAATTTCCCCCGTCGGAAGTAGAGGCAGGACCTTGTGCTTCCAGAGTGTAGGTGCCTTTTGCCACTATATTGACCCTGCTAACAGAAGTGAGAAGTTCCAATTCGGCAGGGAACTGCACTTACTCGATCGGTCACTGAGACATATCGCAGCAAGATCAAATGTTGCTACAAGTGGCACTCCCGATTTCAGCTCCCCTTTTCCAGAAGCTTCTTTTGGACCCAAGGCTAGAGGCGCTTGCTTTTATGCTGTCACTTCCGTAGTCGCCCTCCTTCTCTTTGGGCTGATGGTTGTTTCTCACCCTTTTGTTCTTTTATTTGATCGATATAGAAGAAGAGCTCAGTATTTTGTTGCTAAAACGTGGGCTACTTTGACTGTCATCCCCTTCTTTAACGTGGAATTTGAGGGATTGGAGAATCTTCCTCGGCCAGATGCACCTGCTGTTTATGTTTCCAACCACCAGAGCTTCCTTGACATCTATGCTTTGCTTACTGTTGGACGGAACTTTAAGTTTATAAGCAAAACTTCCATTTTCTTATTCCCTATCATTGGATGGGCTATGTATTTTTTGGGAGTTATACCACTAAAGCGCATGGATAGTCGAAGCCAACTGGAATGTCTTAAGCGGTGTATGGATCTTATCAGGGGAGGTGCATCTGTGTTTTTTTTTCCGGAAGGAACAAGAAGTAAAGATGGGAAGTTAGGTTCTTTCAAGAAAGGTGCATTCAGTGTTGCAGCAAAAACTCAAGTACCAGTTGTGCCCATGACAATAATTGGAACTGGCAGTATCATGCCTGCTGGCAAGGAGGGTTTGCTGAACCCAGGGTCTATTAAAGTTGTAATACACCCGTGTCTGGTCGGAAATGATGCGCAAAAGGCATAG MMATPPAIAHLPLAISPVGSRGRTLCFQSVGAFCHYIDPANRSEKFQFGRELHLLDRSLRHIAARSNVATSGTPDFSSPFPEASFGPKARGACFYAVTSVVALLLFGLMVVSHPFVLLFDRYRRRAQYFVAKTWATLTVIPFFNVEFEGLENLPRPDAPAVYVSNHQSFLDIYALLTVGRNFKFISKTSIFLFPIIGWAMYFLGVIPLKRMDSRSQLECLKRCMDLIRGGASVFFFPEGTRSKDGKLGSFKKGAFSVAAKTQVPVVPMTIIGTGSIMPAGKEGLLNPGSIKVVIHPCLVGNDAQKA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12757.1 vs. NCBI nr
Match: gi|902210815|gb|KNA16534.1| (hypothetical protein SOVF_088210 [Spinacia oleracea]) HSP 1 Score: 572.0 bits (1473), Expect = 6.200e-160 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1
BLAST of Spo12757.1 vs. NCBI nr
Match: gi|731322823|ref|XP_010672106.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 462.6 bits (1189), Expect = 5.300e-127 Identity = 227/282 (80.50%), Postives = 249/282 (88.30%), Query Frame = 1
BLAST of Spo12757.1 vs. NCBI nr
Match: gi|731322833|ref|XP_010672112.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 462.6 bits (1189), Expect = 5.300e-127 Identity = 227/282 (80.50%), Postives = 249/282 (88.30%), Query Frame = 1
BLAST of Spo12757.1 vs. NCBI nr
Match: gi|763787978|gb|KJB54974.1| (hypothetical protein B456_009G056600 [Gossypium raimondii]) HSP 1 Score: 373.2 bits (957), Expect = 4.200e-100 Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 1
BLAST of Spo12757.1 vs. NCBI nr
Match: gi|823219921|ref|XP_012442677.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X2 [Gossypium raimondii]) HSP 1 Score: 373.2 bits (957), Expect = 4.200e-100 Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 1
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBY9_SPIOL (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Spinacia oleracea GN=SOVF_088210 PE=3 SV=1) HSP 1 Score: 572.0 bits (1473), Expect = 4.300e-160 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUE6_BETVU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056610 PE=3 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 3.700e-127 Identity = 227/282 (80.50%), Postives = 249/282 (88.30%), Query Frame = 1
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TE91_GOSRA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Gossypium raimondii GN=B456_009G056600 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.900e-100 Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 1
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TK87_GOSRA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Gossypium raimondii GN=B456_009G056600 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.900e-100 Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 1
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Match: F6HYJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00250 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.500e-99 Identity = 178/274 (64.96%), Postives = 213/274 (77.74%), Query Frame = 1
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Match: LPAT1_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Brassica napus GN=LPAT1 PE=2 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 4.100e-87 Identity = 144/248 (58.06%), Postives = 195/248 (78.63%), Query Frame = 1
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Match: LPAT1_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=LPAT1 PE=2 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.300e-85 Identity = 148/244 (60.66%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Match: PLCB_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.500e-14 Identity = 64/210 (30.48%), Postives = 100/210 (47.62%), Query Frame = 1
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Match: PLCB_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Mus musculus GN=Agpat2 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.600e-14 Identity = 62/210 (29.52%), Postives = 97/210 (46.19%), Query Frame = 1
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Match: PLSC_BORBU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=plsC PE=3 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 3.000e-13 Identity = 53/206 (25.73%), Postives = 102/206 (49.51%), Query Frame = 1
BLAST of Spo12757.1 vs. TAIR (Arabidopsis)
Match: AT4G30580.1 (Phospholipid/glycerol acyltransferase family protein) HSP 1 Score: 317.8 bits (813), Expect = 7.400e-87 Identity = 148/244 (60.66%), Postives = 190/244 (77.87%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12757.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12757.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12757.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12757.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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