Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGGCTCAGTGGCTCAAGAAAACACTTGTGCCGCCGAGCTAGGTGGGTTGAACCAATGTGCACCTTTTGTGGTCCCCGGTGCCGCCAACACAATGCCGAACTCTGATTGTTGTGCCGCCCTCGGGGCCGTGACACACGACTGCCTTTGCAACACCCTTAGGGTTGCTAGTCGTCTCCCCGCCTCTTGCAACCTTCCCGTCCTCAATTGTAGTACGTACTTTAATTTACCCTTATACCCTTTCCTCAATTTTTCATACTTTATATATTAACATGGTACGATATATGTGAACCTACGTGGCTACGTGATCACCACGTACGTAGGGTCGCATATGGTCAAGACATATTAACTTTTTTTTTTTTTTTACTAATTTCATGGTTAAAATTTAATTGCAGGTAACTGAGCTGGAGAAGTGCTGATCAAGAAATAAAGTTTGAAGCTTTTGCAATTTTCCCTTTATTTTTTCTTTCCACTGTTTTAAAATGAGCCCATACCAAAACTATTGGGCCATTTGGTATGCAAGTATGTACGAAAAGAGTGAGAGATAAAGGCACAAATTATAAAGTGTGCAATTATTACTGAATAAATAAAAATCATACTACTACTCCGTTTATGAGAATTCGTCACTTTATACTTCCTCCGTTTTTTTGCATTTGATTTTTGATGCATTTTTTTGGTCACTGGCTCGTATTAGATCCCCGAGATAACGCGTTAATGAAAATTCATTTCGTATTATTATCGATTAAAGATCATAATTTGTACTATACAAAAAGTTAAATTTTATGTGGTTCAAAAAAAAAAAAAATATACTTATGAGTTATGAGTTATGAATAACTGATCATTTTCCTCAAAAATGAAAAAAAATACTGATTAACATTTAGCAGTAAACAAAGCCCATGAACACCTTTTTGTTCATTATCATATATTGGGCCTCAAAAGTCCAAGTGAATGCAAATCTAAGTTAGCCTCCTTAAGTCCTTAGCCCTTACATTAAAATAACACTATGATTTATGCACCAAAAAATAGCATTATGATTTATCAAGGTTTAATTTTTGACAATAAACATTCAACTTATTGTTTGGTTGATAAAAACGAGGGAGGTCACACTTTTCAGTTGCTTACCTAGAGTTTCCTAGGTAAGTGAAATTTTCTACCGAAATTTCACTTCCTATGTTTAACCAAACAATATCACCCACTTCCTAAGAAATGATTACATGGGGAAAAACTTCTTCATAGAAAGTTCTACTTCTTAGGGTCAACCAAACGACCCATAAGAACACACGTGTAACCAATATTCTATACAGATGTTCAATAGCCGGCTTAAAAAAGGTTTCTAAAACACGTTATGTGAGAATGTGAGGTAGTAAAATCATAATATTTTAGTGCGTTTTAACATTTTAACCTACCGTTCTAAATAATCTAAGTAACCATCTCATGCATGATATAATCGGTTGTAATTTACAAGGTACAATCACGGCTATTTTCTTCTTCTTTTTATTTGCCTAAGAAACAATAATAACCTAATAATTATATTTATTGGGCAAAAACCATCAATTAATCTTTATGTAATTATGTAGAAGAATTCTGTAGTAACTATTAAGAGGTTTAGTTGGGCCAATCGTTAATGGTTGATATTTGGGCCGAAGCCCAAAATAAACCATTACCCAATTACCCTTTTCTTCATTTTCGGTCTTTAATGGTAGCAAAGCTCCAAATTAGAAAGAGAGGGAGAAACTGAAGCAGAAGTTCATCGAAATTCCAAAATTGCGCCATTTTCAATCTAAATTTCACTAACGGTAAGCATTTTCTCTTTCAAATTTCCTCATTTCGTTTTCTCTTTCAATTTAATACTCCTTATTCAAGTATTTGATTGTGAAATTATTGGGGGAAAAAGCTCAATCGTAATAAACTTTGTTTGTTTTCCTTTCAATTATGCAATTAGTCTCCTGGGTTACCTATGTTATAAATTTATAATTGGTCTTCTGGGGTGTTTATATTATGATTTATAGCAATTTTGATGGTCAGATAATGTTGATTTTCTTTTATTTTTGCAATTTTGTATGCTGGGCATAGGAAATTATTCAATGTAGGTTCAGAATTCAGAATTTTGGGAAACTTATGATGAATTGGTTTATTTATTTATATGATGAATTATTTGAGCAATAAGTTTGTGGATGTAACAGGAATATGA ATGAACGGCTCAGTGGCTCAAGAAAACACTTGTGCCGCCGAGCTAGGTGGGTTGAACCAATGTGCACCTTTTGTGGTCCCCGGTGCCGCCAACACAATGCCGAACTCTGATTGTTGTGCCGCCCTCGGGGCCGTGACACACGACTGCCTTTGCAACACCCTTAGGGTTGCTAGTCGTCTCCCCGCCTCTTGCAACCTTCCCGTCCTCAATTGTAGTACAAGTTCATCGAAATTCCAAAATTGCGCCATTTTCAATCTAAATTTCACTAACGGAATATGA ATGAACGGCTCAGTGGCTCAAGAAAACACTTGTGCCGCCGAGCTAGGTGGGTTGAACCAATGTGCACCTTTTGTGGTCCCCGGTGCCGCCAACACAATGCCGAACTCTGATTGTTGTGCCGCCCTCGGGGCCGTGACACACGACTGCCTTTGCAACACCCTTAGGGTTGCTAGTCGTCTCCCCGCCTCTTGCAACCTTCCCGTCCTCAATTGTAGTACAAGTTCATCGAAATTCCAAAATTGCGCCATTTTCAATCTAAATTTCACTAACGGAATATGA MNGSVAQENTCAAELGGLNQCAPFVVPGAANTMPNSDCCAALGAVTHDCLCNTLRVASRLPASCNLPVLNCSTSSSKFQNCAIFNLNFTNGI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo12867.1 vs. NCBI nr
Match: gi|902212795|gb|KNA17093.1| (hypothetical protein SOVF_083320 [Spinacia oleracea]) HSP 1 Score: 151.4 bits (381), Expect = 7.900e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1
BLAST of Spo12867.1 vs. NCBI nr
Match: gi|731363529|ref|XP_010693481.1| (PREDICTED: protein MEN-8-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 111.3 bits (277), Expect = 9.000e-22 Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 1
BLAST of Spo12867.1 vs. NCBI nr
Match: gi|6016542|sp|O24356.1|MEN8_SILLA (RecName: Full=Protein MEN-8; Flags: Precursor) HSP 1 Score: 105.1 bits (261), Expect = 6.500e-20 Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1
BLAST of Spo12867.1 vs. NCBI nr
Match: gi|223549943|gb|EEF51430.1| (MEN-8 protein precursor, putative [Ricinus communis]) HSP 1 Score: 99.4 bits (246), Expect = 3.500e-18 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1
BLAST of Spo12867.1 vs. NCBI nr
Match: gi|1000984736|ref|XP_002510828.2| (PREDICTED: protein MEN-8 [Ricinus communis]) HSP 1 Score: 99.4 bits (246), Expect = 3.500e-18 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC60_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083320 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 5.500e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG90_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066380 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.300e-22 Identity = 53/69 (76.81%), Postives = 59/69 (85.51%), Query Frame = 1
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Match: B9R9F3_RICCO (MEN-8 protein, putative OS=Ricinus communis GN=RCOM_1496770 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.500e-18 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Match: B9ID39_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13570g PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-17 Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Match: B9I4C6_POPTR (Tapetum-specific protein A9 OS=Populus trichocarpa GN=POPTR_0012s13560g PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.700e-17 Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Match: MEN8_SILLA (Protein MEN-8 OS=Silene latifolia GN=MEN-8 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.000e-22 Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 1
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Match: FIL1_ANTMA (Stamen-specific protein FIL1 OS=Antirrhinum majus GN=FIL1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.500e-18 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 1
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Match: 108_SOLLC (Protein 108 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.400e-14 Identity = 33/67 (49.25%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Match: A9_ARATH (Tapetum-specific protein A9 OS=Arabidopsis thaliana GN=A9 PE=2 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 3.800e-12 Identity = 34/73 (46.58%), Postives = 42/73 (57.53%), Query Frame = 1
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Match: A9_BRANA (Tapetum-specific protein A9 OS=Brassica napus GN=A9 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.500e-12 Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 1
BLAST of Spo12867.1 vs. TAIR (Arabidopsis)
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 84.3 bits (207), Expect = 4.200e-17 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
BLAST of Spo12867.1 vs. TAIR (Arabidopsis)
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 72.0 bits (175), Expect = 2.100e-13 Identity = 34/73 (46.58%), Postives = 42/73 (57.53%), Query Frame = 1
BLAST of Spo12867.1 vs. TAIR (Arabidopsis)
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-12 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo12867.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo12867.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo12867.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo12867.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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