Spo12877 (gene)

Overview
NameSpo12877
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCleavage and polyadenylation specificity factor subunit 5
Locationchr3 : 2195329 .. 2200635 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCCTGCCCTGGCCACAACCATATTTTAGTTGCAGCCCCCTTTGAAAAAACGTTACATTTATTATGGGCATTTATTTATTTTATTTTGTCTCTTTTTAATTAATAACCCTTGTTAAATCTTGCAATATTCAGTACTTCCCCAGTTGATTTCCCCCCACATTCTTCCCCAAAATCCTTCCCCCCAGAAAAACCCTGATTTCTCTCTGCAAATCACAGAAGAAAGAAGGGCAACTGGGCGAAGAAGGTAAAGAAGCTCGAAGAAAGAAAGAAAGAAAGAAAGAAGCAATAGAAATGGTGAATCCAGCGCCAGTGGTGAACACTTACCCATTATCAAGCTACACTTTCGGCACCAAAGAGCCCAAGATGGAGAAAGATACTTCCGTTGCTGATCGCCTTGCTCGCATGAAACTCAAGTTTGTTTTTCTCTCTCCTCCTCAATTTTCGAGTTTAAATTGTTAAAACCCTCTATAAACCTTGACCCATTTGTATTTTTTGCTGTAATTTTGTTGGGGTTTCTTTAATTTCTTGTTTCTCGTTACTTATGTTGTGAATTTAACAATTTAGGGTTTTAGTTGTGTATTTTTTCGTACATTTCAAAAGAGTTGAATTGGGGATACATTGTGCAAATGATGAAACTAGTTAGGGGTTGGAATTCTGAATTTACTGGTAGAAATTAAGATTTCAGGTTTTGGCAATTGAGATGGATATGTTGGTAGTCTGAAAATTTTGCTGGTTTTCACTTTTCCTGTAGTTACATGAAAGAGGGCATGAGAACAAGTGTGGAGGCAATTCTACTGGTATGGTTCTGAACTCCTATTCGTTTCGAGTTCCTCTAATGACTGTTGTTTTTGAACTATTGAACTTGTCATAATGAAAGCTAGTTATGTTAGAAAACCGAAGGTTTGAGCCGTTTAACTAGTGCACTAGGCCAGAATTCCCCCCGTACGGTGCAAACATAAGACTAACCTCATGGTTGATGAATGATGATAATGATGAATGCATTTTTTTTTTTTGATTAAATGCTGGATGAGTTATCATTTTGGTGTTACACTAATTAACTATGAGGGTTTTGATTAGTTGTGTTCATTGTCTGAGAATTGGGTGATCTTGGTGGAAGCAATATTTTTGTGGTTATGAAGCTGCTAGAAATGTGAGATTAGCTATTGCAATATTGGTGAAAGATCCATTACATATTGCACACTGTGTATGTTTGCATTTTTCTTTGTTGTGGGGGGTGGGGGGGTATCTTCCAATCTTTACTCTATGTATTATTTTCTAATGGATTAGGTGGTGCTCTTTTTTTGTTGGCATGTTTATAAACTTCCCTAATATTGAAGATGCAGACCAATACATCGGATTCCAATTCTTTGAGGAAACTGATCAATTGGAAAAAAAAATTATGTTTGAATCATTTGCATATTCTTCTGAATTATACGTTCCTGCTGGATTAATTTGGAAAACCTGTAGGGAGACGCAAGAACAAACTATATTTTTTCGTTTCTTCTCGTTTCTACTAGGATTAATTTGCTTCATACTGTAGGTGCAAGAGCACAATCATCCACACATACTGCTTCTCCAAATTGGAAACACGTTCTGCAAACTTCCCGGAGGTCGGTTGAAGCCAGGCGAGAATGGTATCTTTCGATTCTTTCCCCTTCCTTAAAAAAGAAAGCATGTCAATTTGCATTGGTTTTACTTTCTTTCGGAAATTTGAGGTATGGTAATTTGACTTTTATCACAGAGATCGAGGGTTTGAAAAGGAAATTATCAAGCAAGCTTGCTGCTACCACACCTTCTCTACATCCAGAGTGGCAGGTAGTATTTTCATATTCTTATATGTCATAGATATCTTTTAATCAGTATATACATCAGAATAACTGATAAAAATGTTCTCATAAAGTTTTTTTTCCGTCTTAACTGCTCAATTTTCTCTTTTTGTTTCAGATAGGGGAGTGTGTAGGTCTTTGGTGGCGGCCAAACTTCGAAACTATTATGTATCCCTACTGTCCCCCTCATATAACCAAACCAAAGGTATTCTAGGGTTATTTTATTATGCTGATAACTGAGAGAGAATTACTTTCAGGCTAATATTTTTGTATCCATATTTGTGAAAATGCAGGAGTGCAAAAAACTTTATATTGTGCATCTATCTGAGAGAGAGTACTTTGCTGTGCCAAAAAACTTTAAACTGCTTGCTGTGCCTTTGTTTGAACTCTATGACAATGTCCAGGTATATGTCCAGAAATATTTCCTGTTTTGTTTTCTTAGATATATGCCTCTCTGCGATTTTGTTTTCTGCTGAAGCTTTAGTAACTATTGACCTTATTTAGAGATGAATGTACCTCATGAAAGTATTTCGAACTGTATTTATCAATTCTGATATTGTACTTTTTAAGTCAAATTATGCATGAAAGATTGTTTGGCCAAGAAGCTTACGGCTGAAACTTTTAGTAGCTACGAACCTTGTTTAGAGAGGATTGTAATTGTTTCAACATGTTTTCGTGGCTTCTTCTTTTATCTTAAAAGTCAAGTTATACCTGACAGACTGGCCTGATTGAGCCTGGTTCAAGTCATTTAAATGGTAAAAGAACCGGACATTCTGTTGACGAGTGCTAGAAGTTCATGCTACACTTCATCATTTCGTGTATTTTCTTTCTGTTGTGCTGGTGTAGCCATTTTATTATCAGTTTTCATCACAGCTTGTAAGTGTCTTTCTTTTTGTTTGCTAAACTTTTTTTGCGAGGATGTCTTGTCCTCCTTTCTCTACTTGTCCCCTCAAAAATATTGTTACGTGATACCAATCAAACAACCAAAATTTATCAAACCTAGGTCGGGGGGATCAGTGATGTTCGACTTGAACTTTAAAAGACTGGATTCCACAACAGTTGAACAATGACCAGGTCTCTGAGTTCGCAAATGCACATGCGTCATCCTATACTGAGGCCCATTCTTAAAAGCATAAGGCTAAGGCATTACCCGATGCCTTAGCAAGGCCTATGCCTCATCTGCAACAAGGCTGTGCCGCACAAATGTTTAGCCTATATTATATCTCACGTTGGTTCAGTGTTACCTAATTCTCTAATCACCTCCATGAACCGCGAACCCAAAAAGCGAATTATAACGTGAAAATGGTACAATTTTGGTCTAATTTAGCAAATCAGGTAGTGAATTGCGTACCCGTACTCAATCTCATACTAGCAAATCAGGTAACTGTGGTTTGGTTGATTCTTTCGTTATACACCGTACCAGAATTTGGAGATAAGTCTTTCCTAGTCTCAAGGAGGCTCCAGGTATCTCCCATAGCTCTTAGAAGCCTTCCCTATTTCTCTTGGACCATAGATAATAGAAAACTCTATGCATTGAAATCCATTTAGATGATGATGCATGTCCGTATGACCTTAAGTTTAATAGGAACTCACGAAAGAGTTGGTGAAATCACAGTTCTTTAAGGCTATAGCATTTGGTTGTGAGACACATCTAATTAGGGGAGATTTGGGAGAATCTCAGTGGAAATTGAAGGGAATTACATGTAAATTCGTCAATTCCTCAAGGGTTGCTTTATTTCCTTATCAAACCTCCTCACTCTTTCGTGCTTAAGTTTATTAAATATATGTCTTCTTGAGTTCTTGCTATGCAAAATCCCCATATCAAATACAAAAGCCACCTATATATATTGAAAGGGTTGTCTGACCTGTCTCACTTGGCAATCTTCCCACGTGGCGCATTTAAGTCTTTAATCTGTTAACAGTGATACTTCATAATGTATTTTCTTGTGAAGTTGATCACGACAAAAGTAAAGAAATCATGTGTATTCAATCTTCTGAGAAGATGTCACAGAAGTCACTCTGTCAAAATTTTATAGTGTATTTTTAGTTAAGCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCATTAAAAAAAAAAATTGTGTATAATTGTATAATTACATAGTATATTGATATTGCTAAAAAAAAGTTCTATCGTTATAAGTTGCCCTCAATATGATCATAATTTAGGTGTACGTCTTTGACTCTTTGCTGCTAGCCTTCTTACTCCTTTATGAAAAGAACTATGTAGTTCTTAAGAGTTGATCACTTAGCAAAATTGCTCCTGTTCATTGGTGTTGCGCCACCGAGTTTGCTATGCAGTGCCTATGTCTTCTATTTGTTGGCAGAGATATCGCTGTTGTACTACCTCCATATTTTTCAGTTTAGTTAGTTTCAGTAGTTTCAATCTATTAAAAGTCAGGTAAAAAGAACAGGACTGCAGTCTGAATGTTTATTATCATGAATTACATGCATCAAACCTGTATAAGTGTATAACAGAAATTGAAAAATGTTCTGATATGAGTTCTTTGCTTGATGACAGAGATATGGACCCGTCTTATCCTCCATTCCACAGCAGCTGTCCAGATTCCAGTTTAAAATGATCACTCCTTGAGATTAACCAGGTTGCAACGTTGCATGGAGTACGTAGTTGCTTCCTACCGTTGTTCGTGGAAGAAAATACAAGTTTACTGGGAAAGACTAAAAGGCCCTTTATTCACATTGAAATACTGGAAGTTACTCTCATAACCTTCACTTAGTCCTACTAATTGGGTATTAATTAGATTTTTCGGATGATTTTTTATGAGATCATTCTCTGGTGTCAGGTATTGGTTTTTAATTCCCTGACAAATTCTTGAACTGTTGTTAGACTAGTATACAACAAAGGCAGGGTAGTAAACTAGTAATAGTATGTTTTGTAGAAATTGTGGTGACTTTTATGGTAGCTGTTTTTGGCAGATTGAATTGTTCTGCTTTTGTAACGAAGGAAAGGGGAAGTTTGTGTTGACAGATCAAATGATTCTGTTGTTTTTCTATTACTGGGAGAGTTGTTTGGTTGCAAAAGATTGTGAAAATGTAGGGATTTCAAATTCCATGAAATTGGAACTTCCCTCATAACATGGGAATTTATTTACCTAGTTCCTCTAGGTAACTCAAAATTCCCATGATTTGCAAAAAAAAATCACCATGTCAAACAAACAAACAAGTTTAAGGCAATTTCTAGGAACTTGATTTGGGATTTTGATTCCCATGAAAGACAAATTCTTATTGGAATTTTGCTTGTAAAATCGCCAACTCAATTGAATGTTTTGCTAGTAAAATTGCTGAATCAGTTGGCGTTTTGTTGATGAACCAGG

mRNA sequence

ACCCTGCCCTGGCCACAACCATATTTTAGTTGCAGCCCCCTTTGAAAAAACGTTACATTTATTATGGGCATTTATTTATTTTATTTTGTCTCTTTTTAATTAATAACCCTTGTTAAATCTTGCAATATTCAGTACTTCCCCAGTTGATTTCCCCCCACATTCTTCCCCAAAATCCTTCCCCCCAGAAAAACCCTGATTTCTCTCTGCAAATCACAGAAGAAAGAAGGGCAACTGGGCGAAGAAGGTAAAGAAGCTCGAAGAAAGAAAGAAAGAAAGAAAGAAGCAATAGAAATGGTGAATCCAGCGCCAGTGGTGAACACTTACCCATTATCAAGCTACACTTTCGGCACCAAAGAGCCCAAGATGGAGAAAGATACTTCCGTTGCTGATCGCCTTGCTCGCATGAAACTCAATTACATGAAAGAGGGCATGAGAACAAGTGTGGAGGCAATTCTACTGGTGCAAGAGCACAATCATCCACACATACTGCTTCTCCAAATTGGAAACACGTTCTGCAAACTTCCCGGAGGTCGGTTGAAGCCAGGCGAGAATGAGATCGAGGGTTTGAAAAGGAAATTATCAAGCAAGCTTGCTGCTACCACACCTTCTCTACATCCAGAGTGGCAGATAGGGGAGTGTGTAGGTCTTTGGTGGCGGCCAAACTTCGAAACTATTATGTATCCCTACTGTCCCCCTCATATAACCAAACCAAAGGAGTGCAAAAAACTTTATATTGTGCATCTATCTGAGAGAGAGTACTTTGCTGTGCCAAAAAACTTTAAACTGCTTGCTGTGCCTTTGTTTGAACTCTATGACAATGTCCAGAGATATGGACCCGTCTTATCCTCCATTCCACAGCAGCTGTCCAGATTCCAGTTTAAAATGATCACTCCTTGAGATTAACCAGGTTGCAACGTTGCATGGAGTACGTAGTTGCTTCCTACCGTTGTTCGTGGAAGAAAATACAAGTTTACTGGGAAAGACTAAAAGGCCCTTTATTCACATTGAAATACTGGAAGTTACTCTCATAACCTTCACTTAGTCCTACTAATTGGGTATTAATTAGATTTTTCGGATGATTTTTTATGAGATCATTCTCTGGTGTCAGGTATTGGTTTTTAATTCCCTGACAAATTCTTGAACTGTTGTTAGACTAGTATACAACAAAGGCAGGGTAGTAAACTAGTAATAGTATGTTTTGTAGAAATTGTGGTGACTTTTATGGTAGCTGTTTTTGGCAGATTGAATTGTTCTGCTTTTGTAACGAAGGAAAGGGGAAGTTTGTGTTGACAGATCAAATGATTCTGTTGTTTTTCTATTACTGGGAGAGTTGTTTGGTTGCAAAAGATTGTGAAAATGTAGGGATTTCAAATTCCATGAAATTGGAACTTCCCTCATAACATGGGAATTTATTTACCTAGTTCCTCTAGGTAACTCAAAATTCCCATGATTTGCAAAAAAAAATCACCATGTCAAACAAACAAACAAGTTTAAGGCAATTTCTAGGAACTTGATTTGGGATTTTGATTCCCATGAAAGACAAATTCTTATTGGAATTTTGCTTGTAAAATCGCCAACTCAATTGAATGTTTTGCTAGTAAAATTGCTGAATCAGTTGGCGTTTTGTTGATGAACCAGG

Coding sequence (CDS)

ATGGTGAATCCAGCGCCAGTGGTGAACACTTACCCATTATCAAGCTACACTTTCGGCACCAAAGAGCCCAAGATGGAGAAAGATACTTCCGTTGCTGATCGCCTTGCTCGCATGAAACTCAATTACATGAAAGAGGGCATGAGAACAAGTGTGGAGGCAATTCTACTGGTGCAAGAGCACAATCATCCACACATACTGCTTCTCCAAATTGGAAACACGTTCTGCAAACTTCCCGGAGGTCGGTTGAAGCCAGGCGAGAATGAGATCGAGGGTTTGAAAAGGAAATTATCAAGCAAGCTTGCTGCTACCACACCTTCTCTACATCCAGAGTGGCAGATAGGGGAGTGTGTAGGTCTTTGGTGGCGGCCAAACTTCGAAACTATTATGTATCCCTACTGTCCCCCTCATATAACCAAACCAAAGGAGTGCAAAAAACTTTATATTGTGCATCTATCTGAGAGAGAGTACTTTGCTGTGCCAAAAAACTTTAAACTGCTTGCTGTGCCTTTGTTTGAACTCTATGACAATGTCCAGAGATATGGACCCGTCTTATCCTCCATTCCACAGCAGCTGTCCAGATTCCAGTTTAAAATGATCACTCCTTGA

Protein sequence

MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSSIPQQLSRFQFKMITP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12877.1Spo12877.1mRNA


Homology
[Close]
BLAST of Spo12877.1 vs. NCBI nr
Match: gi|902235444|gb|KNA23914.1| (hypothetical protein SOVF_019580 [Spinacia oleracea])

HSP 1 Score: 422.2 bits (1084), Expect = 5.200e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH 60
           MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH
Sbjct: 1   MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH 60

Query: 61  NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW 120
           NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW
Sbjct: 61  NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW 120

Query: 121 WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY 180
           WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY
Sbjct: 121 WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY 180

Query: 181 GPVLSSIPQQLSRFQFKMITP 202
           GPVLSSIPQQLSRFQFKMITP
Sbjct: 181 GPVLSSIPQQLSRFQFKMITP 201
[Close]
BLAST of Spo12877.1 vs. NCBI nr
Match: gi|747074807|ref|XP_011084411.1| (PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2-like [Sesamum indicum])

HSP 1 Score: 387.9 bits (995), Expect = 1.100e-104
Identity = 181/197 (91.88%), Postives = 190/197 (96.45%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHNHPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAA +PSL P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPSLQPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMITP 202
           S+IPQQLSRFQF MI P
Sbjct: 184 STIPQQLSRFQFNMIHP 200
[Close]
BLAST of Spo12877.1 vs. NCBI nr
Match: gi|567858442|ref|XP_006421904.1| (hypothetical protein CICLE_v10005929mg [Citrus clementina])

HSP 1 Score: 384.8 bits (987), Expect = 9.200e-104
Identity = 179/196 (91.33%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A +P+L P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF MIT
Sbjct: 184 STIPQQLSRFQFNMIT 199
[Close]
BLAST of Spo12877.1 vs. NCBI nr
Match: gi|225454123|ref|XP_002269748.1| (PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Vitis vinifera])

HSP 1 Score: 384.4 bits (986), Expect = 1.200e-103
Identity = 180/196 (91.84%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAA + +L P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FETIMYPYCPPHITKPKECKKL+IVHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF M+T
Sbjct: 184 STIPQQLSRFQFNMMT 199
[Close]
BLAST of Spo12877.1 vs. NCBI nr
Match: gi|449432171|ref|XP_004133873.1| (PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Cucumis sativus])

HSP 1 Score: 384.0 bits (985), Expect = 1.600e-103
Identity = 178/196 (90.82%), Postives = 189/196 (96.43%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEH HPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A +PSL P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FET+MYPYCPPHITKPKECKKL+IVHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF MIT
Sbjct: 184 STIPQQLSRFQFNMIT 199
[Close]
BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYC5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_019580 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 3.600e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH 60
           MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH
Sbjct: 1   MVNPAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEH 60

Query: 61  NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW 120
           NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW
Sbjct: 61  NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLW 120

Query: 121 WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY 180
           WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY
Sbjct: 121 WRPNFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRY 180

Query: 181 GPVLSSIPQQLSRFQFKMITP 202
           GPVLSSIPQQLSRFQFKMITP
Sbjct: 181 GPVLSSIPQQLSRFQFKMITP 201
[Close]
BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Match: V4U7E9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005929mg PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 6.400e-104
Identity = 179/196 (91.33%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A +P+L P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF MIT
Sbjct: 184 STIPQQLSRFQFNMIT 199
[Close]
BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Match: F6I6I8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03350 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 8.400e-104
Identity = 180/196 (91.84%), Postives = 190/196 (96.94%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 39  SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 98

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAA + +L P+WQIGECV +WWRPN
Sbjct: 99  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRPN 158

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FETIMYPYCPPHITKPKECKKL+IVHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 159 FETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 218

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF M+T
Sbjct: 219 STIPQQLSRFQFNMMT 234
[Close]
BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Match: I3SXB4_MEDTR (Cleavage and polyadenylation specificity factor 5 OS=Medicago truncatula GN=MTR_1g100673 PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.100e-103
Identity = 179/197 (90.86%), Postives = 189/197 (95.94%), Query Frame = 1 

		  

Query: 4   PAPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHP 63
           P+ VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHNHP
Sbjct: 3   PSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 62

Query: 64  HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRP 123
           HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A +P L P+WQIGECV +WWRP
Sbjct: 63  HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWWRP 122

Query: 124 NFETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPV 183
           NFETIMYPYCPPHITKPKECKKL++VHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182

Query: 184 LSSIPQQLSRFQFKMIT 201
           +S+IPQQLSRFQFKMIT
Sbjct: 183 ISTIPQQLSRFQFKMIT 199
[Close]
BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L8Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122550 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.100e-103
Identity = 178/196 (90.82%), Postives = 189/196 (96.43%), Query Frame = 1 

		  

Query: 5   APVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPH 64
           +PVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVEAILLVQEH HPH
Sbjct: 4   SPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHPH 63

Query: 65  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPN 124
           ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A +PSL P+WQIGECV +WWRPN
Sbjct: 64  ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRPN 123

Query: 125 FETIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVL 184
           FET+MYPYCPPHITKPKECKKL+IVHLSEREYFAVPKN KLLAVPLFELYDNVQRYGPV+
Sbjct: 124 FETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183

Query: 185 SSIPQQLSRFQFKMIT 201
           S+IPQQLSRFQF MIT
Sbjct: 184 STIPQQLSRFQFNMIT 199
[Close]
BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Match: CFIS2_ARATH (Pre-mRNA cleavage factor Im 25 kDa subunit 2 OS=Arabidopsis thaliana GN=CFIS2 PE=1 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.200e-98
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 1 

		  

Query: 7   VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHIL 66
           VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHNHPHIL
Sbjct: 6   VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65

Query: 67  LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFE 126
           LLQIGNTFCKLPGGRLKPGENE +GLKRKL+SKL   + +L P+W +GECV  WWRPNFE
Sbjct: 66  LLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPNFE 125

Query: 127 TIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSS 186
           T+MYPYCPPHITKPKECK+LYIVHLSE+EYFAVPKN KLLAVPLFELYDNVQRYGPV+S+
Sbjct: 126 TMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185

Query: 187 IPQQLSRFQFKMIT 201
           IPQQLSRF F MI+
Sbjct: 186 IPQQLSRFHFNMIS 199
[Close]
BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Match: CPSF5_DANRE (Cleavage and polyadenylation specificity factor subunit 5 OS=Danio rerio GN=cpsf5 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.200e-64
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 1 

		  

Query: 8   VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHILL 67
           +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LL
Sbjct: 38  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLL 97

Query: 68  LQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFET 127
           LQ+G TF KLPGG L PGE+E+EGLKR L +++      +  +W I +C+G WWRPNFE 
Sbjct: 98  LQLGTTFFKLPGGELNPGEDEVEGLKR-LMTEILGRQDGVKQDWVIDDCIGNWWRPNFEP 157

Query: 128 IMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSSI 187
             YPY P HITKPKE KKL++V L E+  FAVPKN+KL+A PLFELYDN   YGP++SS+
Sbjct: 158 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 217

Query: 188 PQQLSRFQF 197
           PQ LSRF F
Sbjct: 218 PQLLSRFNF 225
[Close]
BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Match: CPSF5_XENLA (Cleavage and polyadenylation specificity factor subunit 5 OS=Xenopus laevis GN=cpsf5 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.200e-64
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 1 

		  

Query: 8   VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHILL 67
           +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 68  LQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFET 127
           LQ+G TF KLPGG L PGE+E+EGLKR L +++      +  +W I +C+G WWRPNFE 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKR-LMTEILGRQDGVQQDWVIDDCIGNWWRPNFEP 156

Query: 128 IMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSSI 187
             YPY P HITKPKE KKL++V L E+  FAVPKN+KL+A PLFELYDN   YGP++SS+
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216

Query: 188 PQQLSRFQF 197
           PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
[Close]
BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Match: CPSF5_BOVIN (Cleavage and polyadenylation specificity factor subunit 5 OS=Bos taurus GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.100e-64
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 1 

		  

Query: 8   VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHILL 67
           +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 68  LQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFET 127
           LQ+G TF KLPGG L PGE+E+EGLKR L +++      +  +W I +C+G WWRPNFE 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKR-LMTEILGRQDGVLQDWVIDDCIGNWWRPNFEP 156

Query: 128 IMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSSI 187
             YPY P HITKPKE KKL++V L E+  FAVPKN+KL+A PLFELYDN   YGP++SS+
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216

Query: 188 PQQLSRFQF 197
           PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
[Close]
BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Match: CPSF5_HUMAN (Cleavage and polyadenylation specificity factor subunit 5 OS=Homo sapiens GN=NUDT21 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.100e-64
Identity = 113/189 (59.79%), Postives = 141/189 (74.60%), Query Frame = 1 

		  

Query: 8   VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHILL 67
           +N YPL++YTFGTKEP  EKD+SVA R  RM+  + K GMR +VE +L+V EH  PH+LL
Sbjct: 37  INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 96

Query: 68  LQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFET 127
           LQ+G TF KLPGG L PGE+E+EGLKR L +++      +  +W I +C+G WWRPNFE 
Sbjct: 97  LQLGTTFFKLPGGELNPGEDEVEGLKR-LMTEILGRQDGVLQDWVIDDCIGNWWRPNFEP 156

Query: 128 IMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSSI 187
             YPY P HITKPKE KKL++V L E+  FAVPKN+KL+A PLFELYDN   YGP++SS+
Sbjct: 157 PQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 216

Query: 188 PQQLSRFQF 197
           PQ LSRF F
Sbjct: 217 PQLLSRFNF 224
[Close]
BLAST of Spo12877.1 vs. TAIR (Arabidopsis)
Match: AT4G25550.1 (Cleavage/polyadenylation specificity factor, 25kDa subunit)

HSP 1 Score: 360.5 bits (924), Expect = 6.600e-100
Identity = 165/194 (85.05%), Postives = 181/194 (93.30%), Query Frame = 1 

		  

Query: 7   VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHIL 66
           VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHNHPHIL
Sbjct: 6   VVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPHIL 65

Query: 67  LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFE 126
           LLQIGNTFCKLPGGRLKPGENE +GLKRKL+SKL   + +L P+W +GECV  WWRPNFE
Sbjct: 66  LLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPNFE 125

Query: 127 TIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSS 186
           T+MYPYCPPHITKPKECK+LYIVHLSE+EYFAVPKN KLLAVPLFELYDNVQRYGPV+S+
Sbjct: 126 TMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVIST 185

Query: 187 IPQQLSRFQFKMIT 201
           IPQQLSRF F MI+
Sbjct: 186 IPQQLSRFHFNMIS 199
[Close]
BLAST of Spo12877.1 vs. TAIR (Arabidopsis)
Match: AT4G29820.1 (homolog of CFIM-25)

HSP 1 Score: 240.7 bits (613), Expect = 7.600e-64
Identity = 109/193 (56.48%), Postives = 146/193 (75.65%), Query Frame = 1 

		  

Query: 7   VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEAILLVQEHNHPHIL 66
           +V+ YPLSSY FG+KE    KD  ++DR+ R+K NY   G+RT VEA+LLV+   HPH+L
Sbjct: 28  MVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVL 87

Query: 67  LLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATTPSLHPEWQIGECVGLWWRPNFE 126
           LLQ  N+  KLPGGRL+PGE++IEGLKRKL+SKL+         +++GEC+G+WWRPNFE
Sbjct: 88  LLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFE 147

Query: 127 TIMYPYCPPHITKPKECKKLYIVHLSEREYFAVPKNFKLLAVPLFELYDNVQRYGPVLSS 186
           T+MYP+ PP+I  PKEC KL++V L   + F VPKNFKLLAVPL +L++N + YGP++S 
Sbjct: 148 TLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQ 207

Query: 187 IPQQLSRFQFKMI 200
           IP+ LS+F F M+
Sbjct: 208 IPKLLSKFSFNMM 220
The following BLAST results are available for this feature:
BLAST of Spo12877.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902235444|gb|KNA23914.1|5.2e-115100.hypothetical protein SOVF_0195... [more]
gi|747074807|ref|XP_011084411.1|1.1e-10491.8PREDICTED: pre-mRNA cleavage f... [more]
gi|567858442|ref|XP_006421904.1|9.2e-10491.3hypothetical protein CICLE_v10... [more]
gi|225454123|ref|XP_002269748.1|1.2e-10391.8PREDICTED: pre-mRNA cleavage f... [more]
gi|449432171|ref|XP_004133873.1|1.6e-10390.8PREDICTED: pre-mRNA cleavage f... [more]
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BLAST of Spo12877.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RYC5_SPIOL3.6e-115100.Uncharacterized protein OS=Spi... [more]
V4U7E9_9ROSI6.4e-10491.3Uncharacterized protein OS=Cit... [more]
F6I6I8_VITVI8.4e-10491.8Putative uncharacterized prote... [more]
I3SXB4_MEDTR1.1e-10390.8Cleavage and polyadenylation s... [more]
A0A0A0L8Y2_CUCSA1.1e-10390.8Uncharacterized protein OS=Cuc... [more]
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BLAST of Spo12877.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CFIS2_ARATH1.2e-9885.0Pre-mRNA cleavage factor Im 25... [more]
CPSF5_DANRE3.2e-6459.7Cleavage and polyadenylation s... [more]
CPSF5_XENLA3.2e-6459.7Cleavage and polyadenylation s... [more]
CPSF5_BOVIN7.1e-6459.7Cleavage and polyadenylation s... [more]
CPSF5_HUMAN7.1e-6459.7Cleavage and polyadenylation s... [more]
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BLAST of Spo12877.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G25550.16.6e-10085.0Cleavage/polyadenylation speci... [more]
AT4G29820.17.6e-6456.4homolog of CFIM-25[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015797NUDIX hydrolase domain-likeGENE3D3.90.79.10coord: 44..103
score: 4.
IPR015797NUDIX hydrolase domain-likeunknownSSF55811Nudixcoord: 51..120
score: 7.4
IPR016706Cleavage/polyadenylation specificity factor subunit 5PIRPIRSF017888CPSF-25coord: 1..201
score: 1.3
IPR016706Cleavage/polyadenylation specificity factor subunit 5PANTHERPTHR13047PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNITcoord: 6..200
score: 6.6E
IPR016706Cleavage/polyadenylation specificity factor subunit 5PFAMPF13869NUDIX_2coord: 7..194
score: 4.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0016024 CDP-diacylglycerol biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0030001 metal ion transport
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009060 aerobic respiration
biological_process GO:0006096 glycolytic process
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
biological_process GO:0009853 photorespiration
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0070291 N-acylethanolamine metabolic process
biological_process GO:0006333 chromatin assembly or disassembly
biological_process GO:0008643 carbohydrate transport
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0048481 plant ovule development
biological_process GO:0006338 chromatin remodeling
biological_process GO:0006412 translation
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0001510 RNA methylation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0055085 transmembrane transport
biological_process GO:0006508 proteolysis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005618 cell wall
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005849 mRNA cleavage factor complex
cellular_component GO:0070469 respiratory chain
molecular_function GO:0003729 mRNA binding
molecular_function GO:0047412 N-(long-chain-acyl)ethanolamine deacylase activity
molecular_function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo232980.79Barchart | Table
Spo244160.79Barchart | Table
Spo192310.79Barchart | Table
Spo030070.77Barchart | Table
Spo061010.76Barchart | Table
Spo170800.75Barchart | Table
Spo187840.73Barchart | Table
Spo217160.73Barchart | Table
Spo030060.73Barchart | Table
Spo184070.72Barchart | Table
Spo069060.71Barchart | Table
Spo238740.71Barchart | Table
Spo168350.71Barchart | Table
Spo233660.71Barchart | Table
Spo165590.70Barchart | Table
Spo060970.69Barchart | Table
Spo065080.69Barchart | Table
Spo108630.69Barchart | Table
Spo114550.69Barchart | Table
Spo127570.69Barchart | Table
Spo044970.69Barchart | Table
Spo150920.69Barchart | Table
Spo182200.69Barchart | Table
Spo222750.69Barchart | Table
Spo126990.68Barchart | Table
Spo249160.68Barchart | Table
Spo092990.68Barchart | Table
Spo067110.68Barchart | Table
Spo011830.68Barchart | Table
Spo218180.68Barchart | Table
Spo030620.68Barchart | Table
Spo159340.68Barchart | Table
Spo085130.68Barchart | Table
Spo174710.67Barchart | Table
Spo056180.67Barchart | Table
Spo029930.67Barchart | Table
Spo025180.67Barchart | Table
Spo253670.66Barchart | Table
Spo029310.66Barchart | Table
Spo048260.66Barchart | Table
Spo063410.66Barchart | Table
Spo095650.66Barchart | Table
Spo130610.66Barchart | Table
Spo147570.66Barchart | Table
Spo156410.66Barchart | Table
Spo201040.66Barchart | Table
Spo202350.66Barchart | Table
Spo212070.66Barchart | Table
Spo220910.66Barchart | Table
Spo237130.66Barchart | Table
Spo214060.65Barchart | Table
Spo089140.65Barchart | Table
Spo026010.65Barchart | Table