Spo12911 (gene)

Overview
NameSpo12911
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP-dependent clp protease ATP binding subunit
Locationchr3 : 1073650 .. 1077986 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTTACTCTTTCCCATCCTTCCTCCAAAACACTTCAACACCAGTGCCAGAAACGTCACAGAGGAAGCAATTTCTTCCCAAAACACGCCGCTGAAACAAAAATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGGCTAGTTTCTTTAATTCAATTGTATTTTGTCAATTTTATGAATTGATTTTTGTTTTCTGAATTTGGAATTGTGAATTTTTTTTTTGTTATTGCAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAGTAAGGTTCCTTAAAATAAAAATTTGTTTAATTGGTTTGATTTTGTGTCGACACGTGATTTTGTTTTTAATTAAATGTGTACATTATGCTGAAAATGTTCAAATTATGCTAAATGTGTGCTGAGTTATGAGTAGCTAGAACTTCAGTCATGGCGGATATGTTTTGGAATTGCGCTTGTTTTCTTCGGTGGTTGTGGACTAAAACTACTAGCATTGGTTGTGATATACCCTTATCAATAGTGATTAATAACAGTATGAGTATAATGTGCTTAGTTATGAGCTAGCAAGAACTTCAGTCATGGCGGATTGATTTTGGGATTGTGCTTGTTTTCTTCGGTTGTTGTGGACTAAAACTACTAGTATTGCTTATGCTATGCCCTTATCAATACGGAGTAGTTATTAATAGTATGAGCATAATGTGCTTAGTTATGAGCTAGCTAGAACTTCAGCCATGGCGGATTGATTTTGGGATTGCGCTTGTTTTCTTCTGTTGTTGTGGACTAAGACTACTAGTATTGCTTGTGACATGCCCTTACTAATAGCTATTAGTAATAGTATGAGCATCATCAAATTTTGCTTGACCTATTTTAAGTTAATAGGTTGAAGAACTCTTAGGTCTTCGGTTTCGCAAGAAATTAGAAATTTGTCACTCACTAGTAATATATGGATTTGTGTTTGTTGATTGATATGCCCCTTCTGCTTAATGTATATGGACGGCATCCTGGCTTAGAGTATATGGATGGCAGCCTGACTTAGTGTATATGGGTGGTATCCTGAATCAGTTTCTTTTCCTTCGTGACATTTGGAAAGGGGTGTTTTCTTGCCTGTTATTATGTCATTAAAAATTTTCCTTTCTCGACAGTATCTGAATGATTGTTTTGTTTCCAAGCTTGAAACAGATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGTTTGTAACTCAGTCGTGGTTGAAAAATTCTCTTCGGTGTTTTGCAGTTCAGTTTTTAAGACTGCTTATCCTTCACATAATTTTTAATACGTATTAAAAATTTGAACATAATATTTTATTGAACTGCTGGATTGTATATAGAATGGTCAATCCTTTATAAGAATGCTTATGATTTGGACAATACTAAGGTGATTCGGTTGTCCTTAGCTAACCAATCAACTCTATTTGCATAACAGAAATGACTACATCCATGTTCAATAATACTTCTGATCATATTGGTAGCTTNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAATTAGGTATTTAGGTGGAACCACTAGCCCAGGAGGCCATTTAGTGTACACGGACACCAGCATAGATACATTAAGCTAAAGCAACCATTTTGGTCTTTGTTGAGAGGAATTAGCAACTTCAGTGAATAATTTGGTAATTCAAAGTGACGAAGTGTACGTGTGGCTGTTTATTGAGTCAACTTGGAGAAGAACTCTTTAACTTAATCATTCATCTTGGACCTTATTGAGTTGAGGCTGCGTTCTTAAAGAAGAAGGATGAGAAAGTTTTGCATGATTCTTGTCATTGTGGAGATACTAGGAACGTTTTCATTTTGTTATGAGATGCGTGGTTGTTCTTGTTGATAAGCTAAAGCTATATAGAAGTACTTTTTAGTCAGGAATCTGATTTATACAAAAAAGAGGTAGAACAGAAGTATACGATGGATATGGTCTGGTGGTTGGCCGATAGTTGTATCTTGTATGGGAAAGTAACCAGTAGAAGAGAATAAAGAACAACAAGTGCCCTGCTGGAGATTTTTAAAACAGGGAGGGTGATGTGAGAGTTGTATGAAAGTTTGTATCCCATGTTGAAAATTATTAAGGAAGTGTAATGCTTATATTACATCACACAGCCACACAGGGGTTGGAATAATAAGGTCCATTCCCGAGCATATCCCATGTTGATAAATATTAAGGAAGTGAGCTAGATGGATTGGGCTATGTGTGACATAAGTCGTGATTGGATATTCTCGTATGCCCCCATCCGCAGCATAGATATAGTTTCTCCTGGAATATTGATGAAACTTTGCCTTGAACATAGTTTTAATCCTGCAAAATCTCTAGTATTTCCACTATGTTCACTTAAGACTTTAAGGCTCTTGCTCTCTGTTACTTGGAAACCCCTGTCCCTCTTTTTCTTTTCTCCTCAAAGCTGATCTGTTGGATAACTACTACTTGTATTATTTCACCAGCTGAAGTAGTATCTTGCTTTCTATGTATAGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTAGTTTCTTCTCTTTCATTTATCAGGAGGATTCAATATTACTCCGTATATGCCTATTGAATGTGTTTTAGGCCGTAATTCACTAGATCTTTACTGCTTCAAAGCTCAGGTTTTAGACCATAATTCACTGAATCAGAAATGTGTACATCTAACTTTAATCCCATGAACAAAAACTAGTCATAGCTTCCCAAATCTATTTATTTGCTGCTTGATGTTGTACTGTTTATGCAAAAGCCTGCATTCCTTTTAGCGATTCTAGATTTGTAGTTATTATTTGTGTTAATGAAAATGTGTGCCGACAATTTCTTCTGTAATTATATCTAACAGGGCCAATCGGCCAAATTAGCATTAGCAATCTGAGCAAAAGTTTCTAAACTCTTCATTGGCAATGCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTGTGAGTTTCTTGCAGAGTTTTACTCAAAGATCATTCTTTTTTTCATTTACCTCTCATTGCAATAGCAATAGTGCAAACCTTCATAAGGTTTATTTCTATGCCACATCATCATTTTATAAACCTCATTCCCAAAAAAACCTTATGCTTACAAGTTACAATAGACAAACCTATTAAAAAGGTTTATGTAGGGACCCACGAACATATCACCCAACTCACATACGGAGTAAGGGCAATAGCAGTAAGAGGTTTGTCAAGAGGTTTGTATTGCATTTGTTATGTAGACAAACCTCACTATTGTTAGGAAAAGTTACAAAACCCAAGGTTACTAAAGAGCAAGTGGTTTGTATTTGCCATGTAAGCAAAACATATTAATTTTTACTTTCCTTTTGGTGGTTTGTTTTAAATGAGATGAATGATAATAGGTCGCACATATAAACCTTTGTATAGGGTATAGGTTTATCTATTGTTGGTGGAAGGTTCATTATAATCAAGATTTGTAAAATGATGATGTGGCATGGGAACAAACCTTATTAAAGTTTCTTCTATTGCTATTGCTCTTATTTTACTTTCTTTACTTTATGAGATGCAATTGTTTTTAGTAACTTCTCTTAAAATTATTTGGACTAGTAATAGTAACGTTTGTATACAAACCTCAAAATCATGAAACAAACCTCGTGAAAAACCTCTCATTTCCATTGCCCTCCGTTCCCACATTTATGTTCTTTTCTTATAATTTTTTGTTCTACACAGATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

mRNA sequence

CTTTTTTACTCTTTCCCATCCTTCCTCCAAAACACTTCAACACCAGTGCCAGAAACGTCACAGAGGAAGCAATTTCTTCCCAAAACACGCCGCTGAAACAAAAATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

Coding sequence (CDS)

ATGGCTGCTCATTCTCTCACCTCACATTCTCTCTCTTCAATCGCTTCTTCATCGGAGCTTCGCAAATTCAATTGCTCTAATTCGTTTCTTCCATCTGCTAAATCAAGGAGTTTAGTCAGCTCGTTTGTCGGAAATCAGCTCGCAATTCGGCAACCTAACCCTAATTTTGTCGTCTTGAGGCGGCAATCGACGATTATGACCGTTACTTTCAGCTTACCAGCGAGTAAGCCGGAGGGAGTTTCTGCTGATAAAATGCCAAAATGGTCTGCAAGGGCTATAAAATCGTTCGCCATGGGTGAGCTCGAAGCAAGAAAACTAAAGTATCCGAACACAGGGACCGAGGCGCTTCTGATGGGGATCTTGGTTGAGGGAACAAGCCAGGCTGCAAAAGTTTTAAGGGCTAGTGGCGTCACCCTTTTTAAGGTGCGAGATGAAACCATCAACTTGCTTGGAAAATCTGACATGTACTTCTTCAGTCCCGAGCATCCTCCATTGACCGAACCAGCTCAGAAGGCTCTCGATTGGGCTATTGATCAGAAACTGAAGTCAGGTGAAGATGGAGAAGTAACTGTAACTTATTTGCTTCTCGGAATCTGGGAACAAAAGGAGTCTGCTGCTCACCAGATAATGACAGCTCTTGGTTTCAGTGACGAGAAAGCAAAAGAGCTTTCGAAATTTATGGATAAAGACATTGTTCTAGCACATCACAAGTAG

Protein sequence

MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12911.1Spo12911.1mRNA


Homology
[Close]
BLAST of Spo12911.1 vs. NCBI nr
Match: gi|902217451|gb|KNA17713.1| (hypothetical protein SOVF_077300 [Spinacia oleracea])

HSP 1 Score: 449.1 bits (1154), Expect = 4.700e-123
Identity = 234/237 (98.73%), Postives = 236/237 (99.58%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAHSLTSHSLSSIASSSELRKF+ SNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR
Sbjct: 1   MAAHSLTSHSLSSIASSSELRKFDSSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELS+FMDKDIVLAHHK
Sbjct: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSEFMDKDIVLAHHK 237
[Close]
BLAST of Spo12911.1 vs. NCBI nr
Match: gi|731322571|ref|XP_010671969.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 385.2 bits (988), Expect = 8.300e-104
Identity = 198/235 (84.26%), Postives = 217/235 (92.34%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAH+LTS SLSSI+SSSELRKFN   +FL S KS +L+SSF+GNQL IRQPNPNFVVL+
Sbjct: 1   MAAHTLTSSSLSSISSSSELRKFNSYATFLQSFKSSNLLSSFIGNQLTIRQPNPNFVVLK 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQST MTV+FSLP SK EGVSA+K+PKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTNMTVSFSLPTSKREGVSAEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAK+LRA+G+TLFKVRDE ++LLGKSDMY+FSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKILRANGITLFKVRDEIVDLLGKSDMYYFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           LKSGEDGEVTV+YLLLGIWEQKESAAHQIM ALGF+D K KEL K MDKDIV +H
Sbjct: 181 LKSGEDGEVTVSYLLLGIWEQKESAAHQIMVALGFNDVKVKELWKSMDKDIVCSH 235
[Close]
BLAST of Spo12911.1 vs. NCBI nr
Match: gi|596004279|ref|XP_007218298.1| (hypothetical protein PRUPE_ppa010759mg [Prunus persica])

HSP 1 Score: 297.0 bits (759), Expect = 3.000e-77
Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSEL-RKFNCSNSFLPS-AKSRSLVSSFVGNQLAIRQPNPNFVV 60
           MA+ S+T  +LS   S+S+L R  + S+  LP      +L ++F+G +L+IR PN N + 
Sbjct: 1   MASTSITLSALSISPSTSQLHRNPSASSPSLPCHLPPYNLSTTFMGKKLSIRVPNLNHLA 60

Query: 61  LRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120
            + ++ + TV FSLP +KP+  S  K PKWSARAIKSFAMGELEARKLKYPNTGTEALLM
Sbjct: 61  SKHRTAVATVLFSLPTAKPDRNSTGKSPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120

Query: 121 GILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAID 180
           GILVEGTS AAK LRA+G+TLFKVRDET+NLLGKSD+YFFSPEHPPLTEPAQ+ALDWA+D
Sbjct: 121 GILVEGTSLAAKFLRANGITLFKVRDETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVD 180

Query: 181 QKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIV 233
           QKLKSGE+GE+TVT+LLLGIW +KESA H+I+ +LGF +EKAKELSK MD D V
Sbjct: 181 QKLKSGENGEITVTHLLLGIWSEKESAGHKILASLGFDEEKAKELSKSMDSDYV 234
[Close]
BLAST of Spo12911.1 vs. NCBI nr
Match: gi|565362648|ref|XP_006348058.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Solanum tuberosum])

HSP 1 Score: 292.4 bits (747), Expect = 7.300e-76
Identity = 149/236 (63.14%), Postives = 188/236 (79.66%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPN-PNFVVL 60
           MA HS +  S+ S+ S+S  ++   +N+FL     ++L ++F G +L IR  N  NF + 
Sbjct: 1   MATHSFSLLSIQSLTSNSSNKQSENTNTFLTHKYCKALATTFTGGKLLIRPQNLNNFTLK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV FSLP ++PE  S++K PKWS+RAI++F M ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVAFSLPITRPE--SSEKQPKWSSRAIQAFVMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVT FKV +ET+ LLG+SDMY+FSPEHPPLT+PAQKALDWA+++
Sbjct: 121 ILVEGTSLAAKFLRANGVTFFKVSEETLKLLGRSDMYYFSPEHPPLTKPAQKALDWAVNE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGEDGE+TVT++ LGIW  KESA H+IM+  GF DEKAKEL+KFMDKDI L +
Sbjct: 181 KLKSGEDGEITVTHIALGIWSVKESAGHKIMSTFGFDDEKAKELAKFMDKDIELTY 234
[Close]
BLAST of Spo12911.1 vs. NCBI nr
Match: gi|698524270|ref|XP_009758941.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 291.6 bits (745), Expect = 1.300e-75
Identity = 152/236 (64.41%), Postives = 184/236 (77.97%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPN-FVVL 60
           MA HS +  S+ S  S+S  R+ +  N+ L     + L SSF G  ++IR  N N F + 
Sbjct: 1   MATHSFSLLSIPSSTSTSYNRQND--NNTLTQKYCKILASSFTGGMVSIRPQNLNVFALK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV+FSLP +KPE   +D  P+WSARAIK+FAM ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVSFSLPTAKPERAPSDIQPRWSARAIKAFAMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVTL K R+ET+ LLGKSDMYFFSPEHPPLTEPAQ+ALDWA+D+
Sbjct: 121 ILVEGTSLAAKFLRANGVTLLKAREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVDE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGE GE+T+ YL LGIW +KESA H+IM  LGF DEKAKEL++ MDKDI +++
Sbjct: 181 KLKSGESGEITIAYLALGIWSEKESAGHKIMATLGFDDEKAKELARSMDKDIEMSY 234
[Close]
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077300 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.300e-123
Identity = 234/237 (98.73%), Postives = 236/237 (99.58%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAHSLTSHSLSSIASSSELRKF+ SNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR
Sbjct: 1   MAAHSLTSHSLSSIASSSELRKFDSSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELS+FMDKDIVLAHHK
Sbjct: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSEFMDKDIVLAHHK 237
[Close]
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQK4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g055550 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 5.800e-104
Identity = 198/235 (84.26%), Postives = 217/235 (92.34%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPNPNFVVLR 60
           MAAH+LTS SLSSI+SSSELRKFN   +FL S KS +L+SSF+GNQL IRQPNPNFVVL+
Sbjct: 1   MAAHTLTSSSLSSISSSSELRKFNSYATFLQSFKSSNLLSSFIGNQLTIRQPNPNFVVLK 60

Query: 61  RQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120
           RQST MTV+FSLP SK EGVSA+K+PKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI
Sbjct: 61  RQSTNMTVSFSLPTSKREGVSAEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGI 120

Query: 121 LVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQK 180
           LVEGTSQAAK+LRA+G+TLFKVRDE ++LLGKSDMY+FSPEHPPLTEPAQKALDWAIDQK
Sbjct: 121 LVEGTSQAAKILRANGITLFKVRDEIVDLLGKSDMYYFSPEHPPLTEPAQKALDWAIDQK 180

Query: 181 LKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           LKSGEDGEVTV+YLLLGIWEQKESAAHQIM ALGF+D K KEL K MDKDIV +H
Sbjct: 181 LKSGEDGEVTVSYLLLGIWEQKESAAHQIMVALGFNDVKVKELWKSMDKDIVCSH 235
[Close]
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: M5X0A6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010759mg PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.100e-77
Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSEL-RKFNCSNSFLPS-AKSRSLVSSFVGNQLAIRQPNPNFVV 60
           MA+ S+T  +LS   S+S+L R  + S+  LP      +L ++F+G +L+IR PN N + 
Sbjct: 1   MASTSITLSALSISPSTSQLHRNPSASSPSLPCHLPPYNLSTTFMGKKLSIRVPNLNHLA 60

Query: 61  LRRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120
            + ++ + TV FSLP +KP+  S  K PKWSARAIKSFAMGELEARKLKYPNTGTEALLM
Sbjct: 61  SKHRTAVATVLFSLPTAKPDRNSTGKSPKWSARAIKSFAMGELEARKLKYPNTGTEALLM 120

Query: 121 GILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAID 180
           GILVEGTS AAK LRA+G+TLFKVRDET+NLLGKSD+YFFSPEHPPLTEPAQ+ALDWA+D
Sbjct: 121 GILVEGTSLAAKFLRANGITLFKVRDETVNLLGKSDLYFFSPEHPPLTEPAQRALDWAVD 180

Query: 181 QKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIV 233
           QKLKSGE+GE+TVT+LLLGIW +KESA H+I+ +LGF +EKAKELSK MD D V
Sbjct: 181 QKLKSGENGEITVTHLLLGIWSEKESAGHKILASLGFDEEKAKELSKSMDSDYV 234
[Close]
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HL17_SOLCH (Putative clp protease-related protein, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.500e-75
Identity = 149/236 (63.14%), Postives = 187/236 (79.24%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVGNQLAIRQPN-PNFVVL 60
           MA HS +  S+ S+ S+S  ++   + +FL     ++L ++F G +L IR  N  NF + 
Sbjct: 1   MATHSFSLLSIQSLTSNSSNKQSENTTTFLTHKYCKALATTFTGGKLLIRPQNLNNFTLK 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           RR+ST+ TV FSLP ++PE  S++K PKWS+RAI++F M ELEARKLKYPNTGTEALLMG
Sbjct: 61  RRRSTVATVAFSLPITRPE--SSEKQPKWSSRAIQAFVMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+GVT FKV +ET+ LLG+SDMY+FSPEHPPLT+PAQKALDWA+++
Sbjct: 121 ILVEGTSLAAKFLRANGVTFFKVSEETLKLLGRSDMYYFSPEHPPLTKPAQKALDWAVNE 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGEDGE+TVT + LGIW  KESA H+IM+ LGF DEKAKEL+KFMDKDI L +
Sbjct: 181 KLKSGEDGEITVTNIALGIWSVKESAGHKIMSTLGFDDEKAKELAKFMDKDIELTY 234
[Close]
BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Match: A0A059DK71_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02874 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.700e-72
Identity = 147/236 (62.29%), Postives = 181/236 (76.69%), Query Frame = 1 

		  

Query: 1   MAAHSLTSHSLSSIASSSELRKFNCSNSFLPSAKSRS-LVSSFVGNQLAIRQPNPNFVVL 60
           MAA SL++  +S     S  +    S   L   +  S L SSF G++L++  P    +V 
Sbjct: 1   MAARSLSAFPISPSNPQSIPKGARDSPVSLAWNRGPSCLASSFNGSKLSVAPPRSRRLVR 60

Query: 61  RRQSTIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMG 120
           R  S + TV  SLP  KP+  S DK+PKWSARAIKSFAM ELEARKLKYPNTGTEALLMG
Sbjct: 61  RFNSAVATVLLSLPTGKPDRASTDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMG 120

Query: 121 ILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQ 180
           ILVEGTS AAK LRA+G+TLFKVR+ET+NLLGKSD+YFFSPEHPPLTE AQ+ALDWA+D 
Sbjct: 121 ILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYFFSPEHPPLTEQAQRALDWAVDA 180

Query: 181 KLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAH 236
           KLKSGE GE+T T+LLLGIW +KESA H I+++LGF++EKA E++K MDKD++L++
Sbjct: 181 KLKSGESGEITTTHLLLGIWFEKESAGHMILSSLGFTEEKADEVAKSMDKDVILSY 236
[Close]
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPT1_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.400e-66
Identity = 139/235 (59.15%), Postives = 175/235 (74.47%), Query Frame = 1 

		  

Query: 6   LTSHSLSSIASS-SELRKFNCSNSFLPSAKSR-SLVSSFVGNQLAIRQPNPN-FVVLRRQ 65
           + S+++S I  + S  R F    +  PS+ SR  L SS +G +L   QP+   FV   R 
Sbjct: 1   MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRC 60

Query: 66  STIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILV 125
            T  +   ++P ++PE  S+DK+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGILV
Sbjct: 61  LTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILV 120

Query: 126 EGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLK 185
           EGTS  AK LR +GVTLFKVRDET++LLGKSDMYFFSPEHPPLTEPAQKA+ WAID+K K
Sbjct: 121 EGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNK 180

Query: 186 SGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           S  DGE+T  YLLLG+W QK+SA  QI+  LGF+++KAKE+ K M++D+ L+  K
Sbjct: 181 SDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFKK 235
[Close]
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPT2_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.600e-54
Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1 

		  

Query: 1   MAAHS-----LTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVG---NQLAIRQP 60
           MAAHS     LT+  +S I S S+ +K +    F  + K+  L + ++G   + L++  P
Sbjct: 1   MAAHSSCNFALTNPIISQIDSFSK-KKLSVPLYFFSTRKA--LTNPWLGVVDSSLSLTSP 60

Query: 61  NPNFVVLRRQSTIMTVTFSLPASKPEGVSAD-KMPKWSARAIKSFAMGELEARKLKYPNT 120
                  R +    +   SLP + P+ V +D K PKWS RAIKSFAMGELEARKLKYPNT
Sbjct: 61  VSALQTNRPRRIHKSAISSLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNT 120

Query: 121 GTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQK 180
           GTEALLMGIL+EGTS  +K LRA+ + L+KVR+ET+ LLGK+DMYFFSPEHPPLTE AQ+
Sbjct: 121 GTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQR 180

Query: 181 ALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKF 227
           ALD A+DQ LK+G  GEV   ++LLGIW + ES  H+I+  LGF+DEK+KEL  F
Sbjct: 181 ALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESF 232
[Close]
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC1_ORYSJ (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 8.300e-11
Identity = 50/176 (28.41%), Postives = 90/176 (51.14%), Query Frame = 1 

		  

Query: 43  VGNQLAIRQPN---PNFVVLRRQSTIMTVTFSLPASK-PEGVSADKMPKWSARAIKSFAM 102
           +G    +RQ N      V+ R   +I+    S P      GV      +++ +AIK   +
Sbjct: 42  LGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPRGLGSRGVVRAMFERFTEKAIKVIML 101

Query: 103 GELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFF 162
            + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L   R E   ++G+     F
Sbjct: 102 AQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGS--GF 161

Query: 163 SPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALG 215
                P T  A++ L+ ++++  + G +  +   +LLLG+  + E  A +++ +LG
Sbjct: 162 VAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLESLG 214
[Close]
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit ClpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-10
Identity = 43/128 (33.59%), Postives = 72/128 (56.25%), Query Frame = 1 

		  

Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +A+K   + + EAR+L +   GTE +L+GIL EGT  AAK L++ G+TL   R E 
Sbjct: 35  RFTEKAVKVIMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDARIEV 94

Query: 147 INLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAA 206
             ++G+     F     P T  A+K L+ AI++  +      V   +LLLG+ ++ E  A
Sbjct: 95  EKIIGRGS--GFVAIEIPFTPRAKKILELAIEES-RILTHNYVGTEHLLLGLIKEGEGVA 154

Query: 207 HQIMTALG 215
            +++  LG
Sbjct: 155 ARVLENLG 159
[Close]
BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Match: CLPC2_ORYSJ (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-10
Identity = 40/135 (29.63%), Postives = 77/135 (57.04%), Query Frame = 1 

		  

Query: 80  VSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTL 139
           V+     +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L
Sbjct: 84  VTRSMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 143

Query: 140 FKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIW 199
              R E   ++G+ +   F     P T  A++ L+ ++++  + G +  +   +LLLG+ 
Sbjct: 144 KDARVEVEKIIGRGN--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLL 203

Query: 200 EQKESAAHQIMTALG 215
            + E  A +++ +LG
Sbjct: 204 REGEGVAARVLESLG 215
[Close]
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT4G25370.1 (Double Clp-N motif protein)

HSP 1 Score: 254.2 bits (648), Expect = 7.800e-68
Identity = 139/235 (59.15%), Postives = 175/235 (74.47%), Query Frame = 1 

		  

Query: 6   LTSHSLSSIASS-SELRKFNCSNSFLPSAKSR-SLVSSFVGNQLAIRQPNPN-FVVLRRQ 65
           + S+++S I  + S  R F    +  PS+ SR  L SS +G +L   QP+   FV   R 
Sbjct: 1   MASYTVSFIPLTLSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRC 60

Query: 66  STIMTVTFSLPASKPEGVSADKMPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILV 125
            T  +   ++P ++PE  S+DK+PKWSARAIKS AMGELEARKLKYP+TGTEA+LMGILV
Sbjct: 61  LTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILV 120

Query: 126 EGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLK 185
           EGTS  AK LR +GVTLFKVRDET++LLGKSDMYFFSPEHPPLTEPAQKA+ WAID+K K
Sbjct: 121 EGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNK 180

Query: 186 SGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKFMDKDIVLAHHK 238
           S  DGE+T  YLLLG+W QK+SA  QI+  LGF+++KAKE+ K M++D+ L+  K
Sbjct: 181 SDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFKK 235
[Close]
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT4G12060.1 (Double Clp-N motif protein)

HSP 1 Score: 214.2 bits (544), Expect = 9.000e-56
Identity = 126/235 (53.62%), Postives = 162/235 (68.94%), Query Frame = 1 

		  

Query: 1   MAAHS-----LTSHSLSSIASSSELRKFNCSNSFLPSAKSRSLVSSFVG---NQLAIRQP 60
           MAAHS     LT+  +S I S S+ +K +    F  + K+  L + ++G   + L++  P
Sbjct: 1   MAAHSSCNFALTNPIISQIDSFSK-KKLSVPLYFFSTRKA--LTNPWLGVVDSSLSLTSP 60

Query: 61  NPNFVVLRRQSTIMTVTFSLPASKPEGVSAD-KMPKWSARAIKSFAMGELEARKLKYPNT 120
                  R +    +   SLP + P+ V +D K PKWS RAIKSFAMGELEARKLKYPNT
Sbjct: 61  VSALQTNRPRRIHKSAISSLPTANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNT 120

Query: 121 GTEALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQK 180
           GTEALLMGIL+EGTS  +K LRA+ + L+KVR+ET+ LLGK+DMYFFSPEHPPLTE AQ+
Sbjct: 121 GTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQR 180

Query: 181 ALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALGFSDEKAKELSKF 227
           ALD A+DQ LK+G  GEV   ++LLGIW + ES  H+I+  LGF+DEK+KEL  F
Sbjct: 181 ALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTDEKSKELESF 232
[Close]
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT5G50920.1 (CLPC homologue 1)

HSP 1 Score: 65.9 bits (159), Expect = 3.900e-11
Identity = 39/128 (30.47%), Postives = 73/128 (57.03%), Query Frame = 1 

		  

Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +AIK   + + EAR+L +   GTE +L+G++ EGT  AAKVL++ G+ L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 147 INLLGKSDMYFFSPEHPPLTEPAQKALDWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAA 206
             ++G+     F     P T  A++ L+ ++++  + G +  +   +LLLG+  + E  A
Sbjct: 157 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 216

Query: 207 HQIMTALG 215
            +++  LG
Sbjct: 217 ARVLENLG 221
[Close]
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT3G48870.1 (Clp ATPase)

HSP 1 Score: 65.5 bits (158), Expect = 5.200e-11
Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = 1 

		  

Query: 59  LRRQSTIMTVTFSLPASKPEGVSADKMPK-----WSARAIKSFAMGELEARKLKYPNTGT 118
           L R S    V + L  S     ++  +PK     ++ +AIK   + + EAR+L +   GT
Sbjct: 84  LGRPSPGFLVKYKLAKSSGREKASRCVPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGT 143

Query: 119 EALLMGILVEGTSQAAKVLRASGVTLFKVRDETINLLGKSDMYFFSPEHPPLTEPAQKAL 178
           E +L+G++ EGT  AAKVL++ G+ L   R E   ++G+     F     P T  A++ L
Sbjct: 144 EQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGS--GFVAVEIPFTPRAKRVL 203

Query: 179 DWAIDQKLKSGEDGEVTVTYLLLGIWEQKESAAHQIMTALG 215
           + ++++  + G +  +   +LLLG+  + E  A +++  LG
Sbjct: 204 ELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLG 241
[Close]
BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.700e-6
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 1 

		  

Query: 87  KWSARAIKSFAMGELEARKLKYPNTGTEALLMGILVEGTSQAAKVLRASGVTLFKVRDET 146
           +++ +AIK   + + EAR+L Y   GTE +L+ ++ EGT  AAKVL++ G+ L   R E 
Sbjct: 4   RFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEV 63

Query: 147 INLLGK 153
             ++G+
Sbjct: 64  EKIIGR 69
The following BLAST results are available for this feature:
BLAST of Spo12911.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902217451|gb|KNA17713.1|4.7e-12398.7hypothetical protein SOVF_0773... [more]
gi|731322571|ref|XP_010671969.1|8.3e-10484.2PREDICTED: clp protease-relate... [more]
gi|596004279|ref|XP_007218298.1|3.0e-7766.6hypothetical protein PRUPE_ppa... [more]
gi|565362648|ref|XP_006348058.1|7.3e-7663.1PREDICTED: ATP-dependent Clp p... [more]
gi|698524270|ref|XP_009758941.1|1.3e-7564.4PREDICTED: clp protease-relate... [more]
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BLAST of Spo12911.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RE38_SPIOL3.3e-12398.7Uncharacterized protein OS=Spi... [more]
A0A0J8CQK4_BETVU5.8e-10484.2Uncharacterized protein OS=Bet... [more]
M5X0A6_PRUPE2.1e-7766.6Uncharacterized protein OS=Pru... [more]
A0A0V0HL17_SOLCH2.5e-7563.1Putative clp protease-related ... [more]
A0A059DK71_EUCGR7.7e-7262.2Uncharacterized protein OS=Euc... [more]
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BLAST of Spo12911.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CLPT1_ARATH1.4e-6659.1ATP-dependent Clp protease ATP... [more]
CLPT2_ARATH1.6e-5453.6ATP-dependent Clp protease ATP... [more]
CLPC1_ORYSJ8.3e-1128.4Chaperone protein ClpC1, chlor... [more]
CLPC_CYACA1.8e-1033.5ATP-dependent Clp protease ATP... [more]
CLPC2_ORYSJ1.8e-1029.6Chaperone protein ClpC2, chlor... [more]
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BLAST of Spo12911.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G25370.17.8e-6859.1Double Clp-N motif protein[more]
AT4G12060.19.0e-5653.6Double Clp-N motif protein[more]
AT5G50920.13.9e-1130.4CLPC homologue 1[more]
AT3G48870.15.2e-1129.1Clp ATPase[more]
AT3G45450.11.7e-637.8Double Clp-N motif-containing ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004176Clp, N-terminalGENE3D1.10.1780.10coord: 86..222
score: 1.9
IPR004176Clp, N-terminalPFAMPF02861Clp_Ncoord: 102..151
score: 1.9E-9coord: 186..226
score: 9.
IPR004176Clp, N-terminalunknownSSF81923Double Clp-N motifcoord: 87..219
score: 8.37
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 55..210
score: 4.2
NoneNo IPR availablePANTHERPTHR11638:SF105SUBFAMILY NOT NAMEDcoord: 55..210
score: 4.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019538 protein metabolic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0010162 seed dormancy process
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0009845 seed germination
biological_process GO:0006364 rRNA processing
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0051301 cell division
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0034968 histone lysine methylation
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0015976 carbon utilization
biological_process GO:0048825 cotyledon development
biological_process GO:0050826 response to freezing
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0019915 lipid storage
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0006606 protein import into nucleus
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0006177 GMP biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0046907 intracellular transport
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0035999 tetrahydrofolate interconversion
biological_process GO:0009902 chloroplast relocation
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042793 plastid transcription
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006417 regulation of translation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0031425 chloroplast RNA processing
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009416 response to light stimulus
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0006508 proteolysis
biological_process GO:0009658 chloroplast organization
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006342 chromatin silencing
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010206 photosystem II repair
biological_process GO:0030163 protein catabolic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0009987 cellular process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006869 lipid transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0016482 cytosolic transport
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0000373 Group II intron splicing
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006885 regulation of pH
biological_process GO:0016567 protein ubiquitination
biological_process GO:0001510 RNA methylation
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0006813 potassium ion transport
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0006334 nucleosome assembly
biological_process GO:0016571 histone methylation
biological_process GO:0009821 alkaloid biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0009640 photomorphogenesis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0000338 protein deneddylation
biological_process GO:0055085 transmembrane transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0032259 methylation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0009528 plastid inner membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0005634 nucleus
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005730 nucleolus
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0009579 thylakoid
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0009343 biotin carboxylase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009533 chloroplast stromal thylakoid
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0000786 nucleosome
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0005773 vacuole
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0016020 membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005739 mitochondrion
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0048046 apoplast
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016592 mediator complex
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0016459 myosin complex
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0010319 stromule
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016607 nuclear speck
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0030750 putrescine N-methyltransferase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004372 glycine hydroxymethyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0042393 histone binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016462 pyrophosphatase activity
molecular_function GO:0003922 GMP synthase (glutamine-hydrolyzing) activity
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005488 binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0004853 uroporphyrinogen decarboxylase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0015299 solute:proton antiporter activity
molecular_function GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0016905 myosin heavy chain kinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004177 aminopeptidase activity
molecular_function GO:0008235 metalloexopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity
molecular_function GO:0008483 transaminase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008026 ATP-dependent helicase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo137310.81Barchart | Table
Spo181030.79Barchart | Table
Spo007800.79Barchart | Table
Spo232140.79Barchart | Table
Spo171240.78Barchart | Table
Spo156040.78Barchart | Table
Spo125980.78Barchart | Table
Spo064870.78Barchart | Table
Spo001700.77Barchart | Table
Spo266360.77Barchart | Table
Spo194010.76Barchart | Table
Spo166270.76Barchart | Table
Spo037080.76Barchart | Table
Spo171100.75Barchart | Table
Spo055470.75Barchart | Table
Spo259540.75Barchart | Table
Spo179290.75Barchart | Table
Spo138560.75Barchart | Table
Spo016950.75Barchart | Table
Spo201410.74Barchart | Table
Spo157510.74Barchart | Table
Spo155170.74Barchart | Table
Spo153630.74Barchart | Table
Spo223260.74Barchart | Table
Spo193250.74Barchart | Table
Spo208030.74Barchart | Table
Spo119430.73Barchart | Table
Spo123110.73Barchart | Table
Spo110260.73Barchart | Table
Spo065010.73Barchart | Table
Spo042820.73Barchart | Table
Spo201610.73Barchart | Table
Spo162240.72Barchart | Table
Spo160970.72Barchart | Table
Spo055890.72Barchart | Table
Spo181590.72Barchart | Table
Spo061680.72Barchart | Table
Spo064440.72Barchart | Table
Spo097140.72Barchart | Table
Spo137640.72Barchart | Table
Spo021890.72Barchart | Table
Spo056380.71Barchart | Table
Spo223100.71Barchart | Table
Spo219800.71Barchart | Table
Spo172190.71Barchart | Table
Spo084510.71Barchart | Table
Spo235130.71Barchart | Table
Spo219950.71Barchart | Table
Spo029120.71Barchart | Table
Spo168710.71Barchart | Table
Spo107360.71Barchart | Table
Spo123910.70Barchart | Table
Spo246000.70Barchart | Table
Spo168420.70Barchart | Table
Spo194390.70Barchart | Table
Spo061960.70Barchart | Table
Spo020320.70Barchart | Table
Spo186200.70Barchart | Table
Spo186470.70Barchart | Table
Spo089610.69Barchart | Table
Spo222000.69Barchart | Table
Spo228090.69Barchart | Table
Spo036750.69Barchart | Table
Spo052100.69Barchart | Table
Spo054170.69Barchart | Table
Spo057480.69Barchart | Table
Spo261940.69Barchart | Table
Spo085890.69Barchart | Table
Spo089050.69Barchart | Table
Spo098190.69Barchart | Table
Spo120480.69Barchart | Table
Spo123940.69Barchart | Table
Spo256690.69Barchart | Table
Spo192070.69Barchart | Table
Spo256150.69Barchart | Table
Spo124580.68Barchart | Table
Spo058490.68Barchart | Table
Spo155830.68Barchart | Table
Spo016390.68Barchart | Table
Spo118870.68Barchart | Table
Spo057830.68Barchart | Table
Spo057020.68Barchart | Table
Spo118700.68Barchart | Table
Spo095630.68Barchart | Table
Spo140130.68Barchart | Table
Spo093530.68Barchart | Table
Spo263180.68Barchart | Table
Spo032410.68Barchart | Table
Spo025340.68Barchart | Table
Spo087680.68Barchart | Table
Spo156660.68Barchart | Table
Spo010960.68Barchart | Table
Spo259150.68Barchart | Table
Spo015420.68Barchart | Table
Spo141920.68Barchart | Table
Spo145140.68Barchart | Table
Spo176380.68Barchart | Table
Spo158100.68Barchart | Table
Spo207890.67Barchart | Table
Spo154220.67Barchart | Table
Spo259380.67Barchart | Table
Spo128090.67Barchart | Table
Spo120730.67Barchart | Table
Spo170170.67Barchart | Table
Spo077940.67Barchart | Table
Spo071140.67Barchart | Table
Spo064960.67Barchart | Table
Spo232410.67Barchart | Table
Spo058040.67Barchart | Table
Spo183040.67Barchart | Table
Spo184340.67Barchart | Table
Spo021810.67Barchart | Table
Spo223890.67Barchart | Table
Spo051260.67Barchart | Table
Spo050770.67Barchart | Table
Spo203760.67Barchart | Table
Spo152940.67Barchart | Table
Spo231930.67Barchart | Table
Spo211980.67Barchart | Table
Spo272100.66Barchart | Table
Spo013810.66Barchart | Table
Spo061360.66Barchart | Table
Spo110150.66Barchart | Table
Spo129260.66Barchart | Table
Spo137230.66Barchart | Table
Spo141650.66Barchart | Table
Spo163530.66Barchart | Table
Spo175750.66Barchart | Table
Spo218120.66Barchart | Table
Spo223940.66Barchart | Table
Spo225920.66Barchart | Table
Spo251810.66Barchart | Table
Spo254450.66Barchart | Table
Spo260740.66Barchart | Table
Spo000710.66Barchart | Table
Spo044540.65Barchart | Table
Spo192680.65Barchart | Table
Spo180700.65Barchart | Table
Spo176220.65Barchart | Table
Spo128740.65Barchart | Table
Spo123040.65Barchart | Table
Spo004410.65Barchart | Table
Spo231650.65Barchart | Table
Spo229610.65Barchart | Table
Spo215310.65Barchart | Table
Spo064550.65Barchart | Table