Spo12947 (gene)

Overview
NameSpo12947
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaA03g12790D protein
Locationchr3 : 1862211 .. 1866168 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACAAAAATGGGTATTCTAACTGGAAATCAGTTGGTACCGTTGAGCTTAGCATTCCCAATTCGCGCCAACCCTAACTATCATCTTCACGATATAGTTAGGTTAGTTACCCCTCTCAAAACCAGAAGAAATTCCAGAAAATCTTTGAAATTATCAGCGAAACTTGACGATTCTTCATCTCCCACAAATTCCCAGCAACAATTAAACCTCTCTGTCCTCCGATTTACTTTCGGTTAGTTCATCTTCTCTGGCGCATAAACACAAACACCTTGCGTGCATTCTTCTTTGAGGTGAATTGTTCATAATTTCAATTGTTTGGTTAGTTAACTGAATTGGATTTTGTGTAGGAATATCTTGGTTGGATGAATCTTACTTGCCCAGATGGATTGGTTATGGTTTTGGATCTCTTGTTATTCTCAACCATTTTGTTGGTTCGAGTTCCCCTGTAACCTCAGCTCAGCTTGTAAGTTGACATCTTACTTTGTTCGATTGTTGTTGTGAATTTTGGTTTGATTTGATCAAGTAATTTACTTAATTGTGTGTGTAGATTTCAGAGGCGTTGGGTCTTTCGCTGGCGGCTTTCTCTGTAACACTTCCTTATATGGGGAGATTTCTCAAGGTAAATTCTTGTGTTAAAGCATTCCATGATTTTCTGGTGTTACGAATGGCTTATCGTGTTTAGAGAAGTGCTCATAAAGAATAGGGTTTCACTGTCTTGAAACAATTATGTGGGAGTTGATGTGAAATTCAGTTAATTTATCATCACCCAAAAAGATGAAGGAAAATGCTGCAATGTTGTGGAAATTGTTATCAAAATGACAATCACAGATTGTAGGTCTTTTGCCCAGAAATTGCTGAAAAACCCAAGAATGCCCCATTCCCATGTTCTGAATTGTGAACCAAATCAGAAAGAAACTAGAACTAGGTGTCTACATGGTTCAAACTTCAAAGGGTATTTAGGCTCTGTCTTTTCCACTTATTTTGACTTATTTCACACAAGATAAGTTCAAAAAAATTAAGATTTTTTCAAATATTTTCCTACACAAACAAGTTTATTTCAGATAAAATATGTTTATTTCAAATAAAATAAGTTCAGTTAATTGCAGATAAGTTTAGTTAAGTCCAGGTAAGTTCAAATAATATTAATTCATAGAATGCCATTCTCGTTCATCCTTCTGCTACAATATCTCAAGCTCTATCAAGTACGGAATATCAAATATTATGTAGCGATACTCCAAGTATCACCTTAGGATCTTGCTCGTCTTCCATGTAGACTCTTGACATTTAACATGACCTGCTGAATAAGTGGATTTGTTTTGTATGATATTTGGGTGTTGCTGGTTGTTTGCACAACTTGTCACGAAATGTACAAACGGTGTAATCTATACTAAGGGATAAAACTAGGGAAGAGGATTCCTTCTACTATAGGTATGTCAAATGAAAGTTTCTCCTACTCCACTGCTACATATATCCAAAGTCTCATTAATATTTAGAGCGGCTTCCTATTTTCCTGATTTGCTGGATATTTATAAGCAGCAATGGCTAGTTTGTGTGAATCATGATAGCTCCATAGACTGATATTTTAGTACGTTTTCACAGGGAGCAGCACCTGAGGAACTAGCAAGTCTTCCTCAACGTGCTGAACAAGTTTTTGTGATGTCACACAATGTTTCAGATACCCTAAAGGAGGATCTTGCTTGGACAACATATATTCTACTACGCAATACAAAATCTGTCTCAGTGGTAAGTTCATATATTTTTGATTAGGGATATATTATACGAGGCTTAACATTGGCGTTTACCCTACTAATTCCCCAAACTTTGTTAGCATGTTAAGCTTTTAAAATATCTTAGTGTCTAAATTTCAGCTTATATCTTTGCAAGATGTGATCTGTGTCCGCGGATATTGGAACTTACCAGAAAATTTATCAAAGGATGAGATTCTCAACTGGTTCATGGGTAAAATAAGGAAAAATGGGCTGTCTGATGTGAAGGAGACACTCTATTTTCCTCAAAGCACAGGTGAATTGCAAATGTGGGATTCAAAATTATTATTAATCTTTTTACCTACTGAATGCTTCTTTTGGGGATATGTTCCGGTTCTTAAAAAACCAGAGAAATTTGATTCAATTAACTTTTAAGCTTTCTTAGTTTACTAAAAATATTTTACTATGATGTCTGAAGCAAGTTGAAAACATATAGCTGTTGAATTTCAAAACTCTATTGCAACATGTTATGGATATTGTTGACTTGTTGTAATTATGAAGCATGGATGCGGCATCCCGCATCTGCAATGAAGGTTGAAAGATAAGGGTAGTTGCTGGTATGCTTGTTTCCAATGGTCAATATGACATCTAGGGCCGGGTTTGTTGAGGCCATCTTGCGTCTGGTAGTCTAGGTGAGAAGTATGGGGATTCATAGGTTCATGGAGTCCAAAAGACCTGCTATACATTATTATTAAAGATGGTTGTGGTCTGGGCGGGCGTCAGGCCGAACCCACGGGCCTGAACAGGCCCAGCCCACTCTACAGCGTGCCGTGCCGGGCCAAAAGTTGCAAAACAAGGCCCACGGGCCATCGTGCCTAGCCTAATTTTACTAAATTTAGCGTGCTTTGTCGTGGCAGGTCGAGTCGTGCTTTTTCCAAGAACACGACTACGTGCTCGTGCCGACCGTGCTTTTTTCATGCTCGTGCCGGGCCGGGATTTTTTCGTGCAAGATCGGGTTGGGCCTCGGGCCTCCCTGGCCCACAGCCCTCTTTATATATACTTCTTAGATTTTCCACCACTTCACAAGGTGAGTCTATTAGGCATGACAAGGTAACATAATCTTAGGGTCTGACGACAGACGGTCTGGTGTTATACAAGGATCAAGTGACCTTGCATTGGGACTTCTTAGAAGATTTGTTTAAGTTTCCTTAAAATTCTAATCGAGTTTGGGTTCTATGAGGATCTCTTCATGTAATAGCATGTTTGACTGGGGTTCATGACTCAGGACTCAGGACTCAGGAGGCCATGTTGGAACTGTGTCATATGTAGTCAAGACCCAATACTGCCAAAATGGAACATAGGGCATATTGGAGTTGCAATTGGTGGTTACAAACTTACATTAGAACTAAGGTCTAATGTGATTAAGGACTCAACACAACTAAGGGTCTCAGTGTGCTTCTCCAAGTTTTCCACCAAGTAGGCTTTCTTTTTTTGTTGGGTAAGAATGGGGGTCTGTCGAGGCCATTTTAGGTGTGTTATCATATTTGGTTCATGTGGGTAATAGTGTAATACTGTTACAAGATCACTTGCTTCAAAGTCAAGACTTCCTTAATTGAAATACTGCTGTCAATAGAGAAATTCTAAGGCTTGGCATATGACATTTGCAAGGACATGGGCTCACACTTATGACTTATCAGCAAACTTCTGTAGCCTTATTGGTCATTACTGGTCTTTATAAGTAGTTAGTTCTAAGTCGAATCTCTACTTAGAAGTTACTAGGTTTCTTCATTAGCAGAATTCGACATTGTCCTCTATTGAAAGCAAGATGTTTACATGAAAGAACACAGAGATACAAATGTTACATTAGTAATAAGATCTCACTGATGCAGTTTCAGGCTTTCAGCTACCCTACGATCCAAGGAATTAATCTTTTCTGTAGACATTACTGCTGAATTCATCTGTAGTTTTTCTTTTATGGATTTATGAGCAATTCCTATTGCAACATAGCTCATTTATTTGTTTTTCTGGAAATAATGGTACATAGTTCATATATTGCAGGTTCAGTACTGAAGGAGGCTATTCCTGAAGAGACTGGTTCTATTTTAGTACAGCCACTTTGCAGTTCAGAGGCACAGGGAAAGGGAAATGAGAATGATGTGGGATTTGTGCTTGTAGCTTCAGGTGTAAGCTATGCCTATGATGAGAAAGACAAGTTGTGGATAAAAGCCATAGCCAACAAATTCAAAGGTTAG

mRNA sequence

AAAACAAAAATGGGTATTCTAACTGGAAATCAGTTGGTACCGTTGAGCTTAGCATTCCCAATTCGCGCCAACCCTAACTATCATCTTCACGATATAGTTAGGTTAGTTACCCCTCTCAAAACCAGAAGAAATTCCAGAAAATCTTTGAAATTATCAGCGAAACTTGACGATTCTTCATCTCCCACAAATTCCCAGCAACAATTAAACCTCTCTGTCCTCCGATTTACTTTCGGAATATCTTGGTTGGATGAATCTTACTTGCCCAGATGGATTGGTTATGGTTTTGGATCTCTTGTTATTCTCAACCATTTTGTTGGTTCGAGTTCCCCTGTAACCTCAGCTCAGCTTATTTCAGAGGCGTTGGGTCTTTCGCTGGCGGCTTTCTCTGTAACACTTCCTTATATGGGGAGATTTCTCAAGGGAGCAGCACCTGAGGAACTAGCAAGTCTTCCTCAACGTGCTGAACAAGTTTTTGTGATGTCACACAATGTTTCAGATACCCTAAAGGAGGATCTTGCTTGGACAACATATATTCTACTACGCAATACAAAATCTGTCTCAGTGCTTATATCTTTGCAAGATGTGATCTGTGTCCGCGGATATTGGAACTTACCAGAAAATTTATCAAAGGATGAGATTCTCAACTGGTTCATGGGTAAAATAAGGAAAAATGGGCTGTCTGATGTGAAGGAGACACTCTATTTTCCTCAAAGCACAGGTTCAGTACTGAAGGAGGCTATTCCTGAAGAGACTGGTTCTATTTTAGTACAGCCACTTTGCAGTTCAGAGGCACAGGGAAAGGGAAATGAGAATGATGTGGGATTTGTGCTTGTAGCTTCAGGTGTAAGCTATGCCTATGATGAGAAAGACAAGTTGTGGATAAAAGCCATAGCCAACAAATTCAAAGGTTAG

Coding sequence (CDS)

ATGGGTATTCTAACTGGAAATCAGTTGGTACCGTTGAGCTTAGCATTCCCAATTCGCGCCAACCCTAACTATCATCTTCACGATATAGTTAGGTTAGTTACCCCTCTCAAAACCAGAAGAAATTCCAGAAAATCTTTGAAATTATCAGCGAAACTTGACGATTCTTCATCTCCCACAAATTCCCAGCAACAATTAAACCTCTCTGTCCTCCGATTTACTTTCGGAATATCTTGGTTGGATGAATCTTACTTGCCCAGATGGATTGGTTATGGTTTTGGATCTCTTGTTATTCTCAACCATTTTGTTGGTTCGAGTTCCCCTGTAACCTCAGCTCAGCTTATTTCAGAGGCGTTGGGTCTTTCGCTGGCGGCTTTCTCTGTAACACTTCCTTATATGGGGAGATTTCTCAAGGGAGCAGCACCTGAGGAACTAGCAAGTCTTCCTCAACGTGCTGAACAAGTTTTTGTGATGTCACACAATGTTTCAGATACCCTAAAGGAGGATCTTGCTTGGACAACATATATTCTACTACGCAATACAAAATCTGTCTCAGTGCTTATATCTTTGCAAGATGTGATCTGTGTCCGCGGATATTGGAACTTACCAGAAAATTTATCAAAGGATGAGATTCTCAACTGGTTCATGGGTAAAATAAGGAAAAATGGGCTGTCTGATGTGAAGGAGACACTCTATTTTCCTCAAAGCACAGGTTCAGTACTGAAGGAGGCTATTCCTGAAGAGACTGGTTCTATTTTAGTACAGCCACTTTGCAGTTCAGAGGCACAGGGAAAGGGAAATGAGAATGATGTGGGATTTGTGCTTGTAGCTTCAGGTGTAAGCTATGCCTATGATGAGAAAGACAAGTTGTGGATAAAAGCCATAGCCAACAAATTCAAAGGTTAG

Protein sequence

MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTNSQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVLKEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFKG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo12947.1Spo12947.1mRNA


Homology
[Close]
BLAST of Spo12947.1 vs. NCBI nr
Match: gi|902228196|gb|KNA21015.1| (hypothetical protein SOVF_047100 isoform B [Spinacia oleracea])

HSP 1 Score: 589.7 bits (1519), Expect = 2.800e-165
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN
Sbjct: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL
Sbjct: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT
Sbjct: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL
Sbjct: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
           KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK
Sbjct: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 299
[Close]
BLAST of Spo12947.1 vs. NCBI nr
Match: gi|902228195|gb|KNA21014.1| (hypothetical protein SOVF_047100 isoform A [Spinacia oleracea])

HSP 1 Score: 589.7 bits (1519), Expect = 2.800e-165
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN
Sbjct: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL
Sbjct: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT
Sbjct: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL
Sbjct: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
           KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK
Sbjct: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 299
[Close]
BLAST of Spo12947.1 vs. NCBI nr
Match: gi|870846486|gb|KMS99047.1| (hypothetical protein BVRB_3g066490 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 478.4 bits (1230), Expect = 9.100e-132
Identity = 239/300 (79.67%), Postives = 270/300 (90.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQL+PL+L    RAN  YHLH++V   +PLKTRR SRK+LKL AKLDDSSSPTN
Sbjct: 4   MGILTGNQLLPLTLPLTFRAN--YHLHNVV---SPLKTRRKSRKALKLLAKLDDSSSPTN 63

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQ+NLSVLRFTFGISWLDESYLPRW+GYGFGSL+ILNHFVGS+SPVTSAQ ISEALGL
Sbjct: 64  SQQQVNLSVLRFTFGISWLDESYLPRWLGYGFGSLIILNHFVGSNSPVTSAQFISEALGL 123

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFS+TLPY+G+FLKGA PEEL ++PQRA+Q+FVMS NVSD LKEDLAWTTYILLRNT
Sbjct: 124 SLAAFSITLPYVGKFLKGAEPEELTTIPQRAQQIFVMSPNVSDVLKEDLAWTTYILLRNT 183

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVIC+RGYWNLPENLSKDEILNW M KI+K+GLSDV+ETLYF QSTGSVL
Sbjct: 184 KSVSVLISLQDVICIRGYWNLPENLSKDEILNWVMAKIKKSGLSDVEETLYFAQSTGSVL 243

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFKG 300
           ++ IPEETGSIL+QP   ++ Q +G +N++GFVLVAS +SYAYD KD LWIKAIANK KG
Sbjct: 244 EKVIPEETGSILIQPFYITKPQDEGKKNNLGFVLVASSISYAYDGKDMLWIKAIANKLKG 298
[Close]
BLAST of Spo12947.1 vs. NCBI nr
Match: gi|731363565|ref|XP_010693500.1| (PREDICTED: uncharacterized protein LOC104906447 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 476.1 bits (1224), Expect = 4.500e-131
Identity = 238/299 (79.60%), Postives = 269/299 (89.97%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQL+PL+L    RAN  YHLH++V   +PLKTRR SRK+LKL AKLDDSSSPTN
Sbjct: 4   MGILTGNQLLPLTLPLTFRAN--YHLHNVV---SPLKTRRKSRKALKLLAKLDDSSSPTN 63

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQ+NLSVLRFTFGISWLDESYLPRW+GYGFGSL+ILNHFVGS+SPVTSAQ ISEALGL
Sbjct: 64  SQQQVNLSVLRFTFGISWLDESYLPRWLGYGFGSLIILNHFVGSNSPVTSAQFISEALGL 123

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFS+TLPY+G+FLKGA PEEL ++PQRA+Q+FVMS NVSD LKEDLAWTTYILLRNT
Sbjct: 124 SLAAFSITLPYVGKFLKGAEPEELTTIPQRAQQIFVMSPNVSDVLKEDLAWTTYILLRNT 183

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVIC+RGYWNLPENLSKDEILNW M KI+K+GLSDV+ETLYF QSTGSVL
Sbjct: 184 KSVSVLISLQDVICIRGYWNLPENLSKDEILNWVMAKIKKSGLSDVEETLYFAQSTGSVL 243

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
           ++ IPEETGSIL+QP   ++ Q +G +N++GFVLVAS +SYAYD KD LWIKAIANK K
Sbjct: 244 EKVIPEETGSILIQPFYITKPQDEGKKNNLGFVLVASSISYAYDGKDMLWIKAIANKLK 297
[Close]
BLAST of Spo12947.1 vs. NCBI nr
Match: gi|743896691|ref|XP_011041615.1| (PREDICTED: uncharacterized protein LOC105137534 [Populus euphratica])

HSP 1 Score: 326.2 bits (835), Expect = 5.800e-86
Identity = 164/276 (59.42%), Postives = 207/276 (75.00%), Query Frame = 1 

		  

Query: 26  LHDIVRLVTPLKTR-RNSRKSLKLSAKLDDSSSPTNSQQQLNLSVLRFTFGISWLDESYL 85
           +H +++L T  + R +  RKS+ + A  D+  S    QQQLNLSVLRFTFGI  LDESYL
Sbjct: 6   IHPLIQLKTRHQFRAKKPRKSIAIYASSDNPQS--QRQQQLNLSVLRFTFGIPGLDESYL 65

Query: 86  PRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEEL 145
           PRWIGYGFGSL+ILNHF+GS+S  T AQL +E LGLSLAAFS  LPY GRFLKGA P + 
Sbjct: 66  PRWIGYGFGSLLILNHFLGSNSDTTQAQLRTEVLGLSLAAFSAALPYFGRFLKGATPVDQ 125

Query: 146 ASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPEN 205
            +LPQ AEQ+F MS N+SD  KEDLAW TYILLRNT +++VLIS+Q  +CVRGYW  P+N
Sbjct: 126 GTLPQDAEQIFAMSQNISDAQKEDLAWATYILLRNTNTIAVLISIQGELCVRGYWKTPDN 185

Query: 206 LSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVLKEAIPEETGSILVQPLCSSEAQ-G 265
           +SKDE+L+WF  +I   GLSDVK+TLYFPQ+T S + E +PE T S+LV+P+  +  Q G
Sbjct: 186 MSKDEVLDWFKEQIENIGLSDVKDTLYFPQTTESEIWEMLPEGTRSLLVEPVLQATVQSG 245

Query: 266 KGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
              EN+ GF+L+AS + YAY +KD+ WI+A  NKF+
Sbjct: 246 NKTENNEGFILLASSIGYAYSDKDRAWIRATGNKFR 279
[Close]
BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047100 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.000e-165
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN
Sbjct: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL
Sbjct: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT
Sbjct: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL
Sbjct: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
           KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK
Sbjct: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 299
[Close]
BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ26_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047100 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.000e-165
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN
Sbjct: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL
Sbjct: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT
Sbjct: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL
Sbjct: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 300
           KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK
Sbjct: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFK 299
[Close]
BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG97_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066490 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 6.400e-132
Identity = 239/300 (79.67%), Postives = 270/300 (90.00%), Query Frame = 1 

		  

Query: 1   MGILTGNQLVPLSLAFPIRANPNYHLHDIVRLVTPLKTRRNSRKSLKLSAKLDDSSSPTN 60
           MGILTGNQL+PL+L    RAN  YHLH++V   +PLKTRR SRK+LKL AKLDDSSSPTN
Sbjct: 4   MGILTGNQLLPLTLPLTFRAN--YHLHNVV---SPLKTRRKSRKALKLLAKLDDSSSPTN 63

Query: 61  SQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGL 120
           SQQQ+NLSVLRFTFGISWLDESYLPRW+GYGFGSL+ILNHFVGS+SPVTSAQ ISEALGL
Sbjct: 64  SQQQVNLSVLRFTFGISWLDESYLPRWLGYGFGSLIILNHFVGSNSPVTSAQFISEALGL 123

Query: 121 SLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNT 180
           SLAAFS+TLPY+G+FLKGA PEEL ++PQRA+Q+FVMS NVSD LKEDLAWTTYILLRNT
Sbjct: 124 SLAAFSITLPYVGKFLKGAEPEELTTIPQRAQQIFVMSPNVSDVLKEDLAWTTYILLRNT 183

Query: 181 KSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVL 240
           KSVSVLISLQDVIC+RGYWNLPENLSKDEILNW M KI+K+GLSDV+ETLYF QSTGSVL
Sbjct: 184 KSVSVLISLQDVICIRGYWNLPENLSKDEILNWVMAKIKKSGLSDVEETLYFAQSTGSVL 243

Query: 241 KEAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFKG 300
           ++ IPEETGSIL+QP   ++ Q +G +N++GFVLVAS +SYAYD KD LWIKAIANK KG
Sbjct: 244 EKVIPEETGSILIQPFYITKPQDEGKKNNLGFVLVASSISYAYDGKDMLWIKAIANKLKG 298
[Close]
BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Match: B9ID30_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13640g PE=4 SV=2)

HSP 1 Score: 322.8 bits (826), Expect = 4.500e-85
Identity = 162/277 (58.48%), Postives = 206/277 (74.37%), Query Frame = 1 

		  

Query: 26  LHDIVRLVTPLKTR-RNSRKSLKLSAKLDDSSSPTNSQQQLNLSVLRFTFGISWLDESYL 85
           +H +++L T  + R + +RKS+ + A  D+  S    QQQLNLSVLRFTFGI  LDESYL
Sbjct: 6   IHPLIQLKTHHQFRAKKTRKSIAIHASSDNPQSQ-RQQQQLNLSVLRFTFGIPGLDESYL 65

Query: 86  PRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEEL 145
           PRWIGYGFGSL+ILNHF+GS+   T AQL +E LGLSLAAFS  LPY GRFLKGA P + 
Sbjct: 66  PRWIGYGFGSLLILNHFLGSNPDTTQAQLRTEVLGLSLAAFSAALPYFGRFLKGATPVDQ 125

Query: 146 ASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPEN 205
            +LPQ AEQ+F MS N+SD  KEDLAW TYILLRNT +++VLIS+Q  +CVRGYW   + 
Sbjct: 126 GTLPQDAEQIFAMSQNISDAQKEDLAWATYILLRNTNTIAVLISIQGELCVRGYWKTSDK 185

Query: 206 LSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVLKEAIPEETGSILVQPLCSSEAQ-G 265
           +SKDE+L+WF  +I   GLSDVK+TLYFPQ+T S + E +PE T S+LV+P+  +  Q G
Sbjct: 186 MSKDEVLDWFKEQIENIGLSDVKDTLYFPQTTESEIWEMLPEGTRSLLVEPVLQATVQSG 245

Query: 266 KGNENDVGFVLVASGVSYAYDEKDKLWIKAIANKFKG 301
              EN+ GF+L+AS + YAY +KD+ WI+A  NKF+G
Sbjct: 246 NKTENNEGFILLASSIGYAYSDKDRAWIRATGNKFRG 281
[Close]
BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Match: A0A067JER9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26153 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.300e-81
Identity = 151/277 (54.51%), Postives = 210/277 (75.81%), Query Frame = 1 

		  

Query: 26  LHDIVRL-VTPLKTRRNSRKSLKLSAKLDDSSSPTNSQQQLNLSVLRFTFGISWLDESYL 85
           +H +++L + P    + +RKSL +++++D+S +  N QQ+LNLS+LRFTFGI  LDESYL
Sbjct: 6   IHPLIQLNIRPKFRAKVTRKSLVIASRIDNSQTRENQQQELNLSILRFTFGIPGLDESYL 65

Query: 86  PRWIGYGFGSLVILNHFVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEEL 145
           PRWIGYGFGSL++LNHF+GS+S  +  QL +EALG+SLAAFS+ LP+ GRFLKG  P + 
Sbjct: 66  PRWIGYGFGSLLLLNHFLGSNSAASPPQLRTEALGISLAAFSIALPFFGRFLKGVRPMDQ 125

Query: 146 ASLPQRAEQVFVMSHNVSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPEN 205
           A+LP  AEQ+F+MS N+ DT KEDLAW TY+LLRNT +++VLIS+Q  +CVRGYW  P+N
Sbjct: 126 AALPGGAEQIFLMSENIFDTQKEDLAWATYVLLRNTNTIAVLISIQGGLCVRGYWKTPDN 185

Query: 206 LSKDEILNWFMGKIRKNGLSDVKETLYFPQSTGSVLKEAIPEETGSILVQPLCSSEAQGK 265
           LSK ++L+WF+ +I   GL D+++TLYFPQ+  S L E +P+ T S+LV+P+  + A+  
Sbjct: 186 LSKAQLLDWFLKQIDSIGLFDLRDTLYFPQTAESGLWEMLPKGTRSLLVEPVHQARAKSA 245

Query: 266 GN-ENDVGFVLVASGVSYAYDEKDKLWIKAIANKFKG 301
              E   GFVL+AS + YAY +KD+ WI+A+ NKF G
Sbjct: 246 NEMEKIEGFVLLASSMEYAYGDKDRAWIRAVTNKFGG 282
[Close]
BLAST of Spo12947.1 vs. ExPASy Swiss-Prot
Match: CCB2_ARATH (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana GN=CCB2 PE=1 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.400e-76
Identity = 146/261 (55.94%), Postives = 196/261 (75.10%), Query Frame = 1 

		  

Query: 42  SRKSLKLSAKLD-DSSSPTNSQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNH 101
           +++S ++ A+ + DS     S QQLNLSVLRFTFGI   DESYLPRWIGYGFGSL++LNH
Sbjct: 20  AQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLNH 79

Query: 102 FVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHN 161
           F  +S+P++ +Q+ SEALGLSLAAFS+ LPY+G+FLKG+  E+  SLP+  EQVFV+S N
Sbjct: 80  F-SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVEQ-RSLPEEGEQVFVISSN 139

Query: 162 VSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRK 221
           + D+LKEDLAW TY+LLRNT +++VLIS+Q  +CVRGYWN P+ +SK ++ +WF  K+ +
Sbjct: 140 IGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKKVDE 199

Query: 222 NGLSDVKETLYFPQSTGSVLK-EAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGV 281
            GL+DVKETLYFPQ  GS L  + +P+ T S+ VQPL  +  +    +   GF+LVAS  
Sbjct: 200 IGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNTNE---PQKVNGFLLVASTA 259

Query: 282 SYAYDEKDKLWIKAIANKFKG 301
            YAY +KD+ WI A+A KF+G
Sbjct: 260 GYAYSDKDRAWIGAMAEKFRG 275
[Close]
BLAST of Spo12947.1 vs. TAIR (Arabidopsis)
Match: AT5G52110.1 (Protein of unknown function (DUF2930))

HSP 1 Score: 287.7 bits (735), Expect = 8.100e-78
Identity = 146/261 (55.94%), Postives = 196/261 (75.10%), Query Frame = 1 

		  

Query: 42  SRKSLKLSAKLD-DSSSPTNSQQQLNLSVLRFTFGISWLDESYLPRWIGYGFGSLVILNH 101
           +++S ++ A+ + DS     S QQLNLSVLRFTFGI   DESYLPRWIGYGFGSL++LNH
Sbjct: 20  AQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLNH 79

Query: 102 FVGSSSPVTSAQLISEALGLSLAAFSVTLPYMGRFLKGAAPEELASLPQRAEQVFVMSHN 161
           F  +S+P++ +Q+ SEALGLSLAAFS+ LPY+G+FLKG+  E+  SLP+  EQVFV+S N
Sbjct: 80  F-SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVEQ-RSLPEEGEQVFVISSN 139

Query: 162 VSDTLKEDLAWTTYILLRNTKSVSVLISLQDVICVRGYWNLPENLSKDEILNWFMGKIRK 221
           + D+LKEDLAW TY+LLRNT +++VLIS+Q  +CVRGYWN P+ +SK ++ +WF  K+ +
Sbjct: 140 IGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKKVDE 199

Query: 222 NGLSDVKETLYFPQSTGSVLK-EAIPEETGSILVQPLCSSEAQGKGNENDVGFVLVASGV 281
            GL+DVKETLYFPQ  GS L  + +P+ T S+ VQPL  +  +    +   GF+LVAS  
Sbjct: 200 IGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNTNE---PQKVNGFLLVASTA 259

Query: 282 SYAYDEKDKLWIKAIANKFKG 301
            YAY +KD+ WI A+A KF+G
Sbjct: 260 GYAYSDKDRAWIGAMAEKFRG 275
The following BLAST results are available for this feature:
BLAST of Spo12947.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228196|gb|KNA21015.1|2.8e-165100.hypothetical protein SOVF_0471... [more]
gi|902228195|gb|KNA21014.1|2.8e-165100.hypothetical protein SOVF_0471... [more]
gi|870846486|gb|KMS99047.1|9.1e-13279.6hypothetical protein BVRB_3g06... [more]
gi|731363565|ref|XP_010693500.1|4.5e-13179.6PREDICTED: uncharacterized pro... [more]
gi|743896691|ref|XP_011041615.1|5.8e-8659.4PREDICTED: uncharacterized pro... [more]
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BLAST of Spo12947.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RNC1_SPIOL2.0e-165100.Uncharacterized protein OS=Spi... [more]
A0A0K9RQ26_SPIOL2.0e-165100.Uncharacterized protein OS=Spi... [more]
A0A0J8BG97_BETVU6.4e-13279.6Uncharacterized protein OS=Bet... [more]
B9ID30_POPTR4.5e-8558.4Uncharacterized protein OS=Pop... [more]
A0A067JER9_JATCU2.3e-8154.5Uncharacterized protein OS=Jat... [more]
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BLAST of Spo12947.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CCB2_ARATH1.4e-7655.9Protein COFACTOR ASSEMBLY OF C... [more]
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BLAST of Spo12947.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G52110.18.1e-7855.9Protein of unknown function (D... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021325Cofactor assembly of complex C subunit B, CCB2/CCB4PFAMPF11152DUF2930coord: 84..298
score: 9.7
NoneNo IPR availablePANTHERPTHR36403FAMILY NOT NAMEDcoord: 1..300
score: 8.9E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034622 cellular protein-containing complex assembly
biological_process GO:0033617 mitochondrial respiratory chain complex IV assembly
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0006812 cation transport
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009409 response to cold
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009790 embryo development
biological_process GO:0006825 copper ion transport
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0044237 cellular metabolic process
biological_process GO:0015931 nucleobase-containing compound transport
biological_process GO:0009814 defense response, incompatible interaction
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0010319 stromule
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:1990904 ribonucleoprotein complex
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0015391 nucleobase:cation symporter activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression