Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTGTGCAGCTTCATCCTCCGCAATTCTCTCTCCAAACCCTAGGGTTTTCGCCGCTAAATCTCATGCTCCCATGGCAGCAGCTTCCGTTTCTTCTCTCCCCAAACCCTTCTCTCAAACCCTAACTCTTTCTTCCAACTTCAATGGCGTCCGCAAATCCTTTCAATCTCCTCGCCGCGCTCAATCCTCCAGGAGCAGCTTCGTCGTTCGCGCTTCTGTATGTCGTTTTCTTCTCTTAATTTTATTATTTTCAATTGGTTGAATTTTTAGCAATGCGATTGAATTTGCTTGTACTTTTCTGTCGATTATTTCTTTTGAAATGCAGTTGATTTTGAACGTCGCTCCTAATTTCTCGAATTCTTAATTTTGAAGGCAATTGTTGTAGCTTTTGTTAACTCTCTTTGACTAATTCGAATGTATTTGGGATAACAGGTGAATTTGCATTGGTATTGGTATAGTGTTGAATTATCTGTATGCTAGCAGTTTTAATTGATTCAAGCTAGTGTCTTTACTATTTTGTATCTTAAGGAAATTCAATCAGTTGTCTTGCTTATGTAGTGGCTTATTGATGTGCTACACGAAGTGATCTAAATTGATGTAATTTGTTTTCGAATTGTGGATGTGCAGTCTGAAGATTTTGAACTTTTTATTAACTTGTGTGCTACATTTTGATGTTTGTGTTCAAATCATGTCGATTTGTTTTTACCGTTATTTTGAGACTCTAATTGTTTCCTGTACAGAATGATAAATTTGCAAAATTGTTTATTAAAATTAGTCTAGAAGTGTTACATTTTCCATTATAACTCTATACATTTAGGCAATTTCCATCATAACTCCTATACATTGTGGGAAATTTATGGTTTACGATAGGTAATTTTTACAATTAAATTTCTTTTCACTTTATTTTTATTGGGGTATTGGATGACGTGGCAGTTTTTACATGATTTAATTACAATGTTATCCACAACTTGGTTATAGTGGGACTAATCCTGTCATCATTTTTTGGTCCTACTTTTGCAGGCTGAGCTTCCCTTAGTTGGAAATGTTGCACCAGACTTTGAGGCAGAGGCTGTTTTCGACCAAGAGTTCATTAATGTACTAATATAATTCTCTTCCATATCTATTCTTAGCTTAGACTATAATTCCTTTTGCTTTGATATCTCAGTTTCAAACAGGGCTTGATTCTATATTTTTTTTCCCTCCTTTGCAGGTAAAACTTTCCGATTACAGGGGAAAGAAATATGTAATTTTGTTTTTTTACCCGTTGGATTTCACATTTGTTTGCCCTACTGGTTAGTATACTGAATCTTAGAGGCCAAATTCAGGTTTGCAATCACCAAAAAAGAAGTTCTTACTTTTATGCTTCTTTTCTTGTAGAGATCACTGCTTTCAGTGACCGCCACGGGGAGTTTGAGAAGTTGAACACTGAAATACTAGGTGTTTCCGTCGACAGTGTTGTAAGTATCTCTTGTCATTCATATCTTAGGTTGCTTTCACAGTACTATTTGTTAAGTATCAGTTATGGCATTGGTCAATACTTGCTCGAAATGTTCCATCCCTAGTATGTGTGCGCTCAGCTTGAAAACTTCCTGTAAGTAGTTAAGTAGGCAACTAGGTTTTTCCCATCGTTATGAGACTTCAATGTTGTTTGTTGTTGTAAGTAGCCAACTAGGTTGGCTCTTCTCTGATTCTCCTTATTGTCTCTCATGCAGTCCTTCCCCTTTTATATGTTAATTGTTACTTGCATCTTATACTTTTTTTATCTGTTGCCTAAGCTGACAATTTTGAGTCGCCAATATGTCTTGGACTCTTGGTTAATGAGGCCATGAGGGATGACCAGAAAAGGCTGAAAGGGGAATGGGGACGGGGGAGAGGGGTGTTGCATTCCTTCTTTACAGAAAATAAAATTAAATGCATCAGTGTAATAGCTGTAGAGTATCAGTAAACAACTGTTACTTCAATGTGGATATTGTTGCTATAAATTACCCTGTTACCAGTTATTTAACTTATGATTTTAAAGAAGTTTTTCTGCTGAATAATACTTTGTACATCAGAAAAATAGTAAAAAAAAAAAAAAAGGTACATGAAGGAGGGAGAAGGAGCCCTGTCTCTGTCTCGATTCATTGAATGAGGCTGATGCAATTCCCAATCTACACCGTGGCACCAATGAGATTAGTGTTTTGAACAACATTATTGTTGCCGAATATCATGTGTGGTCAACATAAGCAAGTTTTACTTTTGGTTTTGCCAATTTATCCTCTTTACTTTGCGGATGGGATATTAAAATTTGTAGAAGAAATATCTTGAGCCCAAACTAGGAATTATCCCTTATATGGATGGCAGCAGGGCTTTGGTTAAGAAATTTCCTTTTCTTTGTATTTCAAAATTTATTTTACTAAATGTGACATTTTTATCAGACGCGCAACTGACAAGTACACATATTGGTGAAGGGAATGTGAATTGGCACTTCACATTGTCTTCTTGTACTTTATAATTCCATATGTGATGTAGGAGTGCAAAAAAGAAAGTTTGGAGTGCTTACAGCCTTTGGTATTTATGATGTCTTTATCTGAAACCACTGTAATAATTTCATGGTTTGAAAGTTCTATCTTATTTGAATATTGCCCTTTAATGTTTAATCAATTATTTGATAATTTCATGGTTTGAAAGTTATATCGTACACCCGACCCCCCCTTACCCCGCTTCTTGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGAATGATAATGAATGAATGTTTAATCAATTTGAGTTCATCATTTTAGGAAGTTCTTAATTAGTCTTGATTTTGCTTTATACGTGTTCATATAGAGTTGATGTTACTTCACCCTATTGCGGTACCATTATTTTTGGGCATTCATGTAATAATTTTCTGTAAACTCTATTTGTCTACTATTGTGGGTTGATAGGCTTGTTCTTTCTGCAGTTCTCTCATCTCGCATGGGTCCAAACAGAGAGGAAGTCTGGTGGTTTGGGTGATCTGAATTATCCCTTAGTCTCTGACGTCACCAAGTCTATCTCAAAGGCTTTCAATGTTCTGATCCCAGACCAGGTATGAATGGAATCATAGATCACTTTTCAAGTAGTTTTAACTGTGCTTATTACGTGAACTTGTATTAAGGATAGTTAGAGCATCTTTGCAGTCTTTTCTTTTGGTAGCAAATTAGATTCGATATGCAAGTGCATAATGCACATCCTGCTCCTGAAAGAACACATAGAAACAAACTGTATCCCATTGTTATTTCATATTCCTTATCACAATGCCATGTTCTTTTTTATATATACTTGCCATTAATTAAGTAGGTATTTTATAATTTGTAATCGTCTGTTCATTTTTATCAGGGAATTGCATTGAGAGGACTGTTCATCATTGACAAGGAGGGAGTCATTCAACATTCGACGATTAACAACCTTGGTATTGGTCGTAGTGTTGACGAGACTCTAAGAACTCTTCAGGTATGTAGCGGTTGAATTGGCATTCCATACTTACCTTTCTACTGAAGTGGGGAAATGTGAATCAGTTATATTCTCTTCCAAATTGGTTTTGCAGGCATTGCAATTTGTGCAGGAGAACCCCGATGAAGTGTGCCCTGCAGGGTGGAAGCCAGGGGAGAAATCAATGAAGCCAGACCCCAAGCTCAGCAAGGAGTACTTTGCTGCCATATAAGAAGTCCTGATTTTTTGTTATCTTTATCTTGATCTGTAATCTTTTGCGAATTTTGAGCTGACTCTAGGGAATAAGTGTCAACAGCTTATCTGTATACTACGTATTCCTTTATAGCAGATCCAATTTAATGGTAAAAAACTATTTTGATTGAGCTATTTGGATTTTGTTCTATTTCGGACCTAGCAGTAAAAGTGATATTTAAAAAAAAAAAAAATAGAAGCATCGTTAATTGCTCAACTTTTAGCATCTGTTTAGTACAAGCTGACCTCTGCCCCTTTTGGGTGCTGTCTGAACAAGTTTTACCACATTCAGATGAAAAGGTAGAGTTTTGTTTTAGACAAATCATTGTTGACTTGGTGAGTTTGATTACTAGAGGAAATTGATGGGGTTATTTCTATTTTGTCTTGGATTGGATGTTATTTGTGTAACCCTTCATATGACTGAATGTTGCCCTGGTGCCTTTTATATGCAGGATGATGCTACTCTAA ATGGCGTGTGCAGCTTCATCCTCCGCAATTCTCTCTCCAAACCCTAGGGTTTTCGCCGCTAAATCTCATGCTCCCATGGCAGCAGCTTCCGTTTCTTCTCTCCCCAAACCCTTCTCTCAAACCCTAACTCTTTCTTCCAACTTCAATGGCGTCCGCAAATCCTTTCAATCTCCTCGCCGCGCTCAATCCTCCAGGAGCAGCTTCGTCGTTCGCGCTTCTGCTGAGCTTCCCTTAGTTGGAAATGTTGCACCAGACTTTGAGGCAGAGGCTGTTTTCGACCAAGAGTTCATTAATGTAAAACTTTCCGATTACAGGGGAAAGAAATATGTAATTTTGTTTTTTTACCCGTTGGATTTCACATTTGTTTGCCCTACTGAGATCACTGCTTTCAGTGACCGCCACGGGGAGTTTGAGAAGTTGAACACTGAAATACTAGGTGTTTCCGTCGACAGTGTTTTCTCTCATCTCGCATGGGTCCAAACAGAGAGGAAGTCTGGTGGTTTGGGTGATCTGAATTATCCCTTAGTCTCTGACGTCACCAAGTCTATCTCAAAGGCTTTCAATGTTCTGATCCCAGACCAGGGAATTGCATTGAGAGGACTGTTCATCATTGACAAGGAGGGAGTCATTCAACATTCGACGATTAACAACCTTGGTATTGGTCGTAGTGTTGACGAGACTCTAAGAACTCTTCAGGCATTGCAATTTGTGCAGGAGAACCCCGATGAAGTGTGCCCTGCAGGGTGGAAGCCAGGGGAGAAATCAATGAAGCCAGACCCCAAGCTCAGCAAGGAGATGATGCTACTCTAA ATGGCGTGTGCAGCTTCATCCTCCGCAATTCTCTCTCCAAACCCTAGGGTTTTCGCCGCTAAATCTCATGCTCCCATGGCAGCAGCTTCCGTTTCTTCTCTCCCCAAACCCTTCTCTCAAACCCTAACTCTTTCTTCCAACTTCAATGGCGTCCGCAAATCCTTTCAATCTCCTCGCCGCGCTCAATCCTCCAGGAGCAGCTTCGTCGTTCGCGCTTCTGCTGAGCTTCCCTTAGTTGGAAATGTTGCACCAGACTTTGAGGCAGAGGCTGTTTTCGACCAAGAGTTCATTAATGTAAAACTTTCCGATTACAGGGGAAAGAAATATGTAATTTTGTTTTTTTACCCGTTGGATTTCACATTTGTTTGCCCTACTGAGATCACTGCTTTCAGTGACCGCCACGGGGAGTTTGAGAAGTTGAACACTGAAATACTAGGTGTTTCCGTCGACAGTGTTTTCTCTCATCTCGCATGGGTCCAAACAGAGAGGAAGTCTGGTGGTTTGGGTGATCTGAATTATCCCTTAGTCTCTGACGTCACCAAGTCTATCTCAAAGGCTTTCAATGTTCTGATCCCAGACCAGGGAATTGCATTGAGAGGACTGTTCATCATTGACAAGGAGGGAGTCATTCAACATTCGACGATTAACAACCTTGGTATTGGTCGTAGTGTTGACGAGACTCTAAGAACTCTTCAGGCATTGCAATTTGTGCAGGAGAACCCCGATGAAGTGTGCCCTGCAGGGTGGAAGCCAGGGGAGAAATCAATGAAGCCAGACCCCAAGCTCAGCAAGGAGATGATGCTACTCTAA MACAASSSAILSPNPRVFAAKSHAPMAAASVSSLPKPFSQTLTLSSNFNGVRKSFQSPRRAQSSRSSFVVRASAELPLVGNVAPDFEAEAVFDQEFINVKLSDYRGKKYVILFFYPLDFTFVCPTEITAFSDRHGEFEKLNTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPLVSDVTKSISKAFNVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLQALQFVQENPDEVCPAGWKPGEKSMKPDPKLSKEMMLL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13143.1 vs. NCBI nr
Match: gi|902219589|gb|KNA18359.1| (hypothetical protein SOVF_071570 [Spinacia oleracea]) HSP 1 Score: 519.2 bits (1336), Expect = 4.200e-144 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
BLAST of Spo13143.1 vs. NCBI nr
Match: gi|731344826|ref|XP_010683615.1| (PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 464.2 bits (1193), Expect = 1.600e-127 Identity = 241/271 (88.93%), Postives = 250/271 (92.25%), Query Frame = 1
BLAST of Spo13143.1 vs. NCBI nr
Match: gi|719975084|ref|XP_010246607.1| (PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Nelumbo nucifera]) HSP 1 Score: 417.9 bits (1073), Expect = 1.300e-113 Identity = 214/271 (78.97%), Postives = 237/271 (87.45%), Query Frame = 1
BLAST of Spo13143.1 vs. NCBI nr
Match: gi|697114998|ref|XP_009611421.1| (PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Nicotiana tomentosiformis]) HSP 1 Score: 409.1 bits (1050), Expect = 6.100e-111 Identity = 218/274 (79.56%), Postives = 236/274 (86.13%), Query Frame = 1
BLAST of Spo13143.1 vs. NCBI nr
Match: gi|449437450|ref|XP_004136505.1| (PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 1.800e-110 Identity = 212/274 (77.37%), Postives = 236/274 (86.13%), Query Frame = 1
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHD5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071570 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 2.900e-144 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 1
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C335_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g158280 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.100e-127 Identity = 241/271 (88.93%), Postives = 250/271 (92.25%), Query Frame = 1
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Match: Q8RVF8_TOBAC (Thioredoxin peroxidase OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 409.1 bits (1050), Expect = 4.300e-111 Identity = 218/274 (79.56%), Postives = 236/274 (86.13%), Query Frame = 1
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LB09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G778410 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 1.200e-110 Identity = 212/274 (77.37%), Postives = 236/274 (86.13%), Query Frame = 1
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Match: K0I7G7_TOBAC (Thioredoxin peroxidase (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 1.600e-110 Identity = 217/273 (79.49%), Postives = 235/273 (86.08%), Query Frame = 1
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2) HSP 1 Score: 386.3 bits (991), Expect = 2.700e-106 Identity = 206/268 (76.87%), Postives = 226/268 (84.33%), Query Frame = 1
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.500e-104 Identity = 205/268 (76.49%), Postives = 224/268 (83.58%), Query Frame = 1
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=3) HSP 1 Score: 378.3 bits (970), Expect = 7.200e-104 Identity = 200/264 (75.76%), Postives = 220/264 (83.33%), Query Frame = 1
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.800e-99 Identity = 195/266 (73.31%), Postives = 220/266 (82.71%), Query Frame = 1
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.800e-99 Identity = 184/201 (91.54%), Postives = 190/201 (94.53%), Query Frame = 1
BLAST of Spo13143.1 vs. TAIR (Arabidopsis)
Match: AT3G11630.1 (Thioredoxin superfamily protein) HSP 1 Score: 386.3 bits (991), Expect = 1.500e-107 Identity = 206/268 (76.87%), Postives = 226/268 (84.33%), Query Frame = 1
BLAST of Spo13143.1 vs. TAIR (Arabidopsis)
Match: AT5G06290.1 (2-cysteine peroxiredoxin B) HSP 1 Score: 378.3 bits (970), Expect = 4.100e-105 Identity = 200/264 (75.76%), Postives = 220/264 (83.33%), Query Frame = 1
BLAST of Spo13143.1 vs. TAIR (Arabidopsis)
Match: AT1G48130.1 (1-cysteine peroxiredoxin 1) HSP 1 Score: 104.8 bits (260), Expect = 8.700e-23 Identity = 56/176 (31.82%), Postives = 91/176 (51.70%), Query Frame = 1
BLAST of Spo13143.1 vs. TAIR (Arabidopsis)
Match: AT3G26060.2 (Thioredoxin superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 1.100e-14 Identity = 65/210 (30.95%), Postives = 101/210 (48.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13143.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13143.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13143.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13143.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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