Spo13171 (gene) | SpinachBase

Overview


Name	Spo13171
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Methyltransferase-related protein, putative
Location	chr3 : 10283158 .. 10284208 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAATATTCTTTCTGCAACAAAGGTATTTCAATTATTTTTCTCTCTCTAATAATCTTGCCGGAATTACTTAGGCAGAAGGGTGGGAAATTTGAAAATAACCCAGAAATTGTTTGTATATTTCTAAAAAATGTGCCCTTTAAGATTCATTTTAGTGTTTTTCTCTGCAATTTTGGCTGGATTTTTGGCATGGAAATCATTTCGTTCTGCACCCGAGCTCGATACCGCCTTTTCTGAAGATTTGGTGGCAGATAAACCAGCGTCGTCAATGGATGATCACCAAGAAAAGAACCTTAAAATGGTAAATATCCTATTCCTTTTTATTTTCTTTTTTTGGGATTTTTTTTCTGTAATTTGTTTTCTAAAGTACATTTTATTTACGTTTTTGGAAATTTCCAGATAATTCAAGACGGTTTCTGGGTATTTGTTGACATGGCTAGTGGGAGATACTTGTGGAGAAATTTAAAGGGGATGAAGACAGTGGAGAAAGTAAAGAACTGCTAAAATCTCAATTTCAGAATCCTTGCATTTTTCACTTTGTTGAATATGAGTTACAGATTACATCTTTCTCTTCTTTTTCTTTTTTGTGTAAAAGGAACCGCGATTACATAGACAGGATTCGATCAAACGTCATTGATATGAGTACGAGTTACTTTGTAAGTTGCCAAAGTGTGTAAATTTGTTATTCTGACTTTAAGAATCTGGGAAAATTTTCTATGTCGAATAACTTTGTACTACTTGCAATTGTGCATGATTTCTGCTAAAGAAATTTATACCCAGTTTAACTTTTAATTGCAAAATGTGACTATATATCTTGGGCTGAATTTTTGGCTATTTTGTTATCCGTTAATGGTTCAACTTAAAGTCAACCGACACTTTGGAAAGATTGTTTAATCATCCTCTTGCAGCTTTACAGCAGAGAAGCAGAATATTACTCAATCCTGTAATGTATAAGTTCTGATTTGCTCAAAACGTGACTGCAATGAATATACTTTTTTTTTCCAATTAAGGTAAGGAAAAGATAAAACAAGCAATGCCTAGATACACACACA

mRNA sequence

TCCAATATTCTTTCTGCAACAAAGGTATTTCAATTATTTTTCTCTCTCTAATAATCTTGCCGGAATTACTTAGGCAGAAGGGTGGGAAATTTGAAAATAACCCAGAAATTGTTTGTATATTTCTAAAAAATGTGCCCTTTAAGATTCATTTTAGTGTTTTTCTCTGCAATTTTGGCTGGATTTTTGGCATGGAAATCATTTCGTTCTGCACCCGAGCTCGATACCGCCTTTTCTGAAGATTTGGTGGCAGATAAACCAGCGTCGTCAATGGATGATCACCAAGAAAAGAACCTTAAAATGATAATTCAAGACGGTTTCTGGGTATTTGTTGACATGGCTAGTGGGAGATACTTGTGGAGAAATTTAAAGGGGATGAAGACAGTGGAGAAAGTAAAGAACTGCTAAAATCTCAATTTCAGAATCCTTGCATTTTTCACTTTGTTGAATATGAGTTACAGATTACATCTTTCTCTTCTTTTTCTTTTTTGTGTAAAAGGAACCGCGATTACATAGACAGGATTCGATCAAACGTCATTGATATGAGTACGAGTTACTTTGTAAGTTGCCAAAGTGTGTAAATTTGTTATTCTGACTTTAAGAATCTGGGAAAATTTTCTATGTCGAATAACTTTGTACTACTTGCAATTGTGCATGATTTCTGCTAAAGAAATTTATACCCAGTTTAACTTTTAATTGCAAAATGTGACTATATATCTTGGGCTGAATTTTTGGCTATTTTGTTATCCGTTAATGGTTCAACTTAAAGTCAACCGACACTTTGGAAAGATTGTTTAATCATCCTCTTGCAGCTTTACAGCAGAGAAGCAGAATATTACTCAATCCTGTAATGTATAAGTTCTGATTTGCTCAAAACGTGACTGCAATGAATATACTTTTTTTTTCCAATTAAGGTAAGGAAAAGATAAAACAAGCAATGCCTAGATACACACACA

Coding sequence (CDS)

ATGTGCCCTTTAAGATTCATTTTAGTGTTTTTCTCTGCAATTTTGGCTGGATTTTTGGCATGGAAATCATTTCGTTCTGCACCCGAGCTCGATACCGCCTTTTCTGAAGATTTGGTGGCAGATAAACCAGCGTCGTCAATGGATGATCACCAAGAAAAGAACCTTAAAATGATAATTCAAGACGGTTTCTGGGTATTTGTTGACATGGCTAGTGGGAGATACTTGTGGAGAAATTTAAAGGGGATGAAGACAGTGGAGAAAGTAAAGAACTGCTAA

Protein sequence

MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQDGFWVFVDMASGRYLWRNLKGMKTVEKVKNC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13171.1	Spo13171.1	mRNA

Homology

[Close]

BLAST of Spo13171.1 vs. NCBI nr
Match: gi|902217337|gb|KNA17665.1| (hypothetical protein SOVF_077870 [Spinacia oleracea])

HSP 1 Score: 187.6 bits (475), Expect = 9.800e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ
Sbjct: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 92
          DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC
Sbjct: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 91

[Close]

BLAST of Spo13171.1 vs. NCBI nr
Match: gi|731322708|ref|XP_010672044.1| (PREDICTED: uncharacterized protein LOC104888707 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 5.400e-35
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSAILAGFLAW+SFRS+PELD A SED  ADK  SS DD QE+NLKMIIQ
Sbjct: 1  MCPLRFILVFFSAILAGFLAWRSFRSSPELDFAISEDSTADKTTSSKDDKQERNLKMIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 92
          DGFWVFVDMASG+YLWRN K M TVEKVK+C
Sbjct: 61 DGFWVFVDMASGKYLWRNFKEMNTVEKVKSC 91

[Close]

BLAST of Spo13171.1 vs. NCBI nr
Match: gi|743821683|ref|XP_011021479.1| (PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica])

HSP 1 Score: 117.1 bits (292), Expect = 1.600e-23
Identity = 57/90 (63.33%), Postives = 72/90 (80.00%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSA+LAG+ AW++ RS+PE+D   S+D  A+K  +S++D QE NLK +IQ
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDMVSDDSTAEK--TSLEDKQEFNLKRMIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          +GFWVFVDMASG YLWRNLK MK    +K+
Sbjct: 61 NGFWVFVDMASGSYLWRNLKEMKKDATLKS 88

[Close]

BLAST of Spo13171.1 vs. NCBI nr
Match: gi|224125870|ref|XP_002319695.1| (hypothetical protein POPTR_0013s05470g [Populus trichocarpa])

HSP 1 Score: 116.3 bits (290), Expect = 2.800e-23
Identity = 57/90 (63.33%), Postives = 71/90 (78.89%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSA+LAG+ AW++ RS+PE+D   S+D  A+K  +S+ + QE N K IIQ
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDFVSDDSTAEK--TSLREKQEFNFKRIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          +GFWVFVDMASGRYLWRN K MK  E +K+
Sbjct: 61 NGFWVFVDMASGRYLWRNFKEMKKDETLKS 88

[Close]

BLAST of Spo13171.1 vs. NCBI nr
Match: gi|743873352|ref|XP_011034377.1| (PREDICTED: uncharacterized protein LOC105132516 [Populus euphratica])

HSP 1 Score: 115.5 bits (288), Expect = 4.700e-23
Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSA+LAG+ AW++ RS+PE+D   S+D  A+K  + + D QE N K IIQ
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDFVSDDSTAEK--TYLRDKQEFNFKRIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          +GFWVFVDMASGRYLWRN K MK  E +K+
Sbjct: 61 NGFWVFVDMASGRYLWRNFKEMKKDETLKS 88

[Close]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDV6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_077870 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 6.800e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ
Sbjct: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 92
          DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC
Sbjct: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 91

[Close]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUK9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056150 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.800e-35
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSAILAGFLAW+SFRS+PELD A SED  ADK  SS DD QE+NLKMIIQ
Sbjct: 1  MCPLRFILVFFSAILAGFLAWRSFRSSPELDFAISEDSTADKTTSSKDDKQERNLKMIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKNC 92
          DGFWVFVDMASG+YLWRN K M TVEKVK+C
Sbjct: 61 DGFWVFVDMASGKYLWRNFKEMNTVEKVKSC 91

[Close]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Match: B9I5Y1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s05470g PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.900e-23
Identity = 57/90 (63.33%), Postives = 71/90 (78.89%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRFILVFFSA+LAG+ AW++ RS+PE+D   S+D  A+K  +S+ + QE N K IIQ
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDFVSDDSTAEK--TSLREKQEFNFKRIIQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          +GFWVFVDMASGRYLWRN K MK  E +K+
Sbjct: 61 NGFWVFVDMASGRYLWRNFKEMKKDETLKS 88

[Close]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Match: B9SHF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1121640 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.300e-23
Identity = 55/92 (59.78%), Postives = 71/92 (77.17%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEK--NLKMI 60
          MCPLRFILVFFSA+LAG+ AW++ RS+PE++T  S+D   +K     D++  K  + K I
Sbjct: 1  MCPLRFILVFFSAVLAGYFAWRTVRSSPEIETTVSDDSTVEKKPLQDDNNNNKVCSAKRI 60

Query: 61 IQDGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          IQ+GFWVFVDMASG+YLWRNLK M+  EKVK+
Sbjct: 61 IQNGFWVFVDMASGKYLWRNLKEMREDEKVKS 92

[Close]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Match: A0A061F3J3_THECC (Methyltransferase-related protein, putative OS=Theobroma cacao GN=TCM_026468 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.600e-22
Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCP+RF+LVFFSA+LAG++AW++ RS+ ++D   SED  +DK  +   D QE + + ++Q
Sbjct: 1  MCPMRFLLVFFSAVLAGYVAWRTVRSSSDIDDVVSED--SDKMVAK--DKQEFSFRRMVQ 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMKTVEKVKN 91
          +GFWVFVDMASGRYLWRNLK MKT EKVKN
Sbjct: 61 NGFWVFVDMASGRYLWRNLKEMKTDEKVKN 86

[Close]

BLAST of Spo13171.1 vs. TAIR (Arabidopsis)
Match: AT5G18150.1 (Methyltransferase-related protein)

HSP 1 Score: 97.1 bits (240), Expect = 6.100e-21
Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCP+RF+LVFFSA+LAG+ AWK+  S+PE D+              +++ QE NLK  ++
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPEFDSP-----------DELNEKQELNLKKKME 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMK 84
          +GFWVFVDMASGRYLWRNLK M+
Sbjct: 61 NGFWVFVDMASGRYLWRNLKEMR 72

[Close]

BLAST of Spo13171.1 vs. TAIR (Arabidopsis)
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 89.0 bits (219), Expect = 1.700e-18
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPELDTAFSEDLVADKPASSMDDHQEKNLKMIIQ 60
          MCPLRF+LVFFSA+LAG++AW++  S PEL   FS++L+     +   + Q  + K  + 
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPEL---FSDELL----QAEAKEKQGLDFKRKMD 60

Query: 61 DGFWVFVDMASGRYLWRNLKGMK 84
          +G W FVDMASGRYLWRNLK M+
Sbjct: 61 NGLWTFVDMASGRYLWRNLKEMR 76

[Close]

BLAST of Spo13171.1 vs. TAIR (Arabidopsis)
Match: AT5G58375.1 (Methyltransferase-related protein)

HSP 1 Score: 63.9 bits (154), Expect = 5.800e-11
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1

		  
Query: 1  MCPLRFILVFFSAILAGFLAWKSFRSAPE--LDTAFSEDLVADKPASSMDDHQEKNLKMI 60
          MCPLR IL+F SA LAGF   +   S  +  LD +F++   AD  + S        + M 
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPLDDSFTDAEHADDDSVS----GFSKVGMA 60

Query: 61 IQDGFWVFVDMASGRYLWRNL 80
          ++ GFW  VDMASGRYLW NL
Sbjct: 61 MKSGFWTCVDMASGRYLWNNL 77

The following BLAST results are available for this feature:

BLAST of Spo13171.1 vs. NCBI nr
BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
BLAST of Spo13171.1 vs. ExPASy Swiss-Prot
BLAST of Spo13171.1 vs. TAIR (Arabidopsis)

BLAST of Spo13171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902217337\|gb\|KNA17665.1\|	9.8e-45	100.	hypothetical protein SOVF_0778...	[more]
gi\|731322708\|ref\|XP_010672044.1\|	5.4e-35	82.4	PREDICTED: uncharacterized pro...	[more]
gi\|743821683\|ref\|XP_011021479.1\|	1.6e-23	63.3	PREDICTED: uncharacterized pro...	[more]
gi\|224125870\|ref\|XP_002319695.1\|	2.8e-23	63.3	hypothetical protein POPTR_001...	[more]
gi\|743873352\|ref\|XP_011034377.1\|	4.7e-23	63.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RDV6_SPIOL	6.8e-45	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CUK9_BETVU	3.8e-35	82.4	Uncharacterized protein OS=Bet...	[more]
B9I5Y1_POPTR	1.9e-23	63.3	Uncharacterized protein OS=Pop...	[more]
B9SHF7_RICCO	7.3e-23	59.7	Putative uncharacterized prote...	[more]
A0A061F3J3_THECC	1.6e-22	61.1	Methyltransferase-related prot...	[more]

BLAST of Spo13171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo13171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G18150.1	6.1e-21	55.4	Methyltransferase-related prot...	[more]
AT5G14602.1	1.7e-18	53.0	FUNCTIONS IN: molecular_functi...	[more]
AT5G58375.1	5.8e-11	45.6	Methyltransferase-related prot...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34132	FAMILY NOT NAMED	coord: 2..90 score: 7.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010200	response to chitin
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0010286	heat acclimation
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0007033	vacuole organization
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0007030	Golgi organization
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006508	proteolysis
biological_process	GO:0048767	root hair elongation
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006810	transport
biological_process	GO:0000041	transition metal ion transport
biological_process	GO:0006950	response to stress
biological_process	GO:0048831	regulation of shoot system development
biological_process	GO:0010029	regulation of seed germination
biological_process	GO:0080036	regulation of cytokinin-activated signaling pathway
biological_process	GO:0031537	regulation of anthocyanin metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0015698	inorganic anion transport
biological_process	GO:0009553	embryo sac development
biological_process	GO:0016049	cell growth
biological_process	GO:0051301	cell division
biological_process	GO:0009555	pollen development
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0045900	negative regulation of translational elongation
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0052542	defense response by callose deposition
biological_process	GO:0009987	cellular process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0010107	potassium ion import
biological_process	GO:0006768	biotin metabolic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006432	phenylalanyl-tRNA aminoacylation
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0030091	protein repair
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006457	protein folding
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0010118	stomatal movement
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007584	response to nutrient
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009817	defense response to fungus, incompatible interaction
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009723	response to ethylene
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0042908	xenobiotic transport
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0043407	negative regulation of MAP kinase activity
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048519	negative regulation of biological process
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009850	auxin metabolic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0048439	flower morphogenesis
biological_process	GO:0048438	floral whorl development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0031515	tRNA (m1A) methyltransferase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009328	phenylalanine-tRNA ligase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009349	riboflavin synthase complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005795	Golgi stack
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0005047	signal recognition particle binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0043424	protein histidine kinase binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0009927	histidine phosphotransfer kinase activity
molecular_function	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0008559	xenobiotic transmembrane transporting ATPase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0004746	riboflavin synthase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003935	GTP cyclohydrolase II activity
molecular_function	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004826	phenylalanine-tRNA ligase activity
molecular_function	GO:0000049	tRNA binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0004077	biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0008375	acetylglucosaminyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23332	0.76	Barchart \| Table
Spo13583	0.76	Barchart \| Table
Spo11524	0.76	Barchart \| Table
Spo15499	0.76	Barchart \| Table
Spo16640	0.76	Barchart \| Table
Spo24331	0.75	Barchart \| Table
Spo19018	0.75	Barchart \| Table
Spo01925	0.74	Barchart \| Table
Spo22811	0.74	Barchart \| Table
Spo01686	0.74	Barchart \| Table
Spo00526	0.74	Barchart \| Table
Spo14537	0.74	Barchart \| Table
Spo00748	0.74	Barchart \| Table
Spo19938	0.74	Barchart \| Table
Spo04941	0.74	Barchart \| Table
Spo22451	0.74	Barchart \| Table
Spo23382	0.74	Barchart \| Table
Spo17333	0.74	Barchart \| Table
Spo18605	0.73	Barchart \| Table
Spo27165	0.73	Barchart \| Table
Spo28265	0.73	Barchart \| Table
Spo20174	0.73	Barchart \| Table
Spo14630	0.73	Barchart \| Table
Spo03610	0.73	Barchart \| Table
Spo21155	0.72	Barchart \| Table
Spo09344	0.72	Barchart \| Table
Spo09381	0.72	Barchart \| Table
Spo10864	0.72	Barchart \| Table
Spo15390	0.72	Barchart \| Table
Spo05307	0.72	Barchart \| Table
Spo05781	0.72	Barchart \| Table
Spo05915	0.72	Barchart \| Table
Spo26899	0.72	Barchart \| Table
Spo06335	0.72	Barchart \| Table
Spo13507	0.72	Barchart \| Table
Spo25985	0.71	Barchart \| Table
Spo11960	0.71	Barchart \| Table
Spo13499	0.71	Barchart \| Table
Spo24133	0.71	Barchart \| Table
Spo10835	0.71	Barchart \| Table
Spo16936	0.71	Barchart \| Table
Spo22436	0.71	Barchart \| Table
Spo08935	0.71	Barchart \| Table
Spo00247	0.71	Barchart \| Table
Spo05402	0.71	Barchart \| Table
Spo13614	0.70	Barchart \| Table
Spo02890	0.70	Barchart \| Table
Spo08645	0.70	Barchart \| Table
Spo16801	0.70	Barchart \| Table
Spo22998	0.70	Barchart \| Table
Spo17612	0.70	Barchart \| Table
Spo14914	0.70	Barchart \| Table
Spo15317	0.70	Barchart \| Table
Spo27364	0.70	Barchart \| Table
Spo01261	0.70	Barchart \| Table
Spo09769	0.70	Barchart \| Table
Spo10907	0.70	Barchart \| Table
Spo25633	0.70	Barchart \| Table
Spo17610	0.70	Barchart \| Table
Spo26678	0.70	Barchart \| Table
Spo01876	0.70	Barchart \| Table
Spo13783	0.70	Barchart \| Table
Spo01514	0.69	Barchart \| Table
Spo19217	0.69	Barchart \| Table
Spo19457	0.69	Barchart \| Table
Spo19836	0.69	Barchart \| Table
Spo20106	0.69	Barchart \| Table
Spo24808	0.69	Barchart \| Table
Spo00677	0.69	Barchart \| Table
Spo27352	0.69	Barchart \| Table
Spo04741	0.69	Barchart \| Table
Spo05125	0.69	Barchart \| Table
Spo06164	0.69	Barchart \| Table
Spo01054	0.69	Barchart \| Table
Spo07557	0.69	Barchart \| Table
Spo08114	0.69	Barchart \| Table
Spo08494	0.69	Barchart \| Table
Spo08997	0.69	Barchart \| Table
Spo11834	0.69	Barchart \| Table
Spo11860	0.69	Barchart \| Table
Spo16648	0.69	Barchart \| Table
Spo17337	0.69	Barchart \| Table
Spo13210	0.68	Barchart \| Table
Spo06022	0.68	Barchart \| Table
Spo16186	0.68	Barchart \| Table
Spo25307	0.68	Barchart \| Table
Spo25107	0.68	Barchart \| Table
Spo09427	0.68	Barchart \| Table
Spo07892	0.68	Barchart \| Table
Spo05779	0.68	Barchart \| Table
Spo11509	0.68	Barchart \| Table
Spo25659	0.68	Barchart \| Table
Spo21525	0.68	Barchart \| Table
Spo14667	0.68	Barchart \| Table
Spo21362	0.68	Barchart \| Table
Spo25573	0.68	Barchart \| Table
Spo12363	0.68	Barchart \| Table
Spo09798	0.68	Barchart \| Table
Spo09499	0.68	Barchart \| Table
Spo04201	0.68	Barchart \| Table
Spo13161	0.68	Barchart \| Table
Spo04142	0.67	Barchart \| Table
Spo00667	0.67	Barchart \| Table
Spo00943	0.67	Barchart \| Table
Spo23853	0.67	Barchart \| Table
Spo18778	0.67	Barchart \| Table
Spo23257	0.67	Barchart \| Table
Spo22403	0.67	Barchart \| Table
Spo17320	0.67	Barchart \| Table
Spo00205	0.67	Barchart \| Table
Spo24675	0.67	Barchart \| Table
Spo18080	0.67	Barchart \| Table
Spo11364	0.67	Barchart \| Table
Spo09434	0.67	Barchart \| Table
Spo11431	0.67	Barchart \| Table
Spo26013	0.67	Barchart \| Table
Spo00283	0.67	Barchart \| Table
Spo20050	0.67	Barchart \| Table
Spo19123	0.67	Barchart \| Table
Spo09387	0.67	Barchart \| Table
Spo00369	0.67	Barchart \| Table
Spo08478	0.67	Barchart \| Table
Spo26430	0.67	Barchart \| Table
Spo07236	0.67	Barchart \| Table
Spo07181	0.67	Barchart \| Table
Spo26697	0.67	Barchart \| Table
Spo06953	0.67	Barchart \| Table
Spo06655	0.67	Barchart \| Table
Spo13905	0.67	Barchart \| Table
Spo02480	0.67	Barchart \| Table
Spo05728	0.67	Barchart \| Table
Spo04554	0.67	Barchart \| Table
Spo04433	0.67	Barchart \| Table
Spo02918	0.66	Barchart \| Table
Spo00966	0.66	Barchart \| Table
Spo01217	0.66	Barchart \| Table
Spo01291	0.66	Barchart \| Table
Spo01628	0.66	Barchart \| Table
Spo02486	0.66	Barchart \| Table
Spo02696	0.66	Barchart \| Table
Spo02932	0.66	Barchart \| Table
Spo03362	0.66	Barchart \| Table
Spo03572	0.66	Barchart \| Table
Spo04200	0.66	Barchart \| Table
Spo07515	0.66	Barchart \| Table
Spo09399	0.66	Barchart \| Table
Spo10316	0.66	Barchart \| Table
Spo10898	0.66	Barchart \| Table
Spo11482	0.66	Barchart \| Table
Spo12089	0.66	Barchart \| Table
Spo12145	0.66	Barchart \| Table
Spo13393	0.66	Barchart \| Table
Spo13788	0.66	Barchart \| Table
Spo14087	0.66	Barchart \| Table
Spo14294	0.66	Barchart \| Table
Spo15461	0.66	Barchart \| Table
Spo18589	0.66	Barchart \| Table
Spo18997	0.66	Barchart \| Table
Spo21635	0.66	Barchart \| Table
Spo22396	0.66	Barchart \| Table
Spo23278	0.66	Barchart \| Table
Spo23712	0.66	Barchart \| Table
Spo23818	0.66	Barchart \| Table
Spo25725	0.66	Barchart \| Table
Spo25988	0.66	Barchart \| Table
Spo26355	0.66	Barchart \| Table
Spo26511	0.66	Barchart \| Table
Spo26610	0.66	Barchart \| Table
Spo27081	0.66	Barchart \| Table
Spo25008	0.65	Barchart \| Table
Spo16361	0.65	Barchart \| Table
Spo16188	0.65	Barchart \| Table
Spo25483	0.65	Barchart \| Table
Spo14881	0.65	Barchart \| Table
Spo13450	0.65	Barchart \| Table
Spo12332	0.65	Barchart \| Table
Spo26975	0.65	Barchart \| Table
Spo11688	0.65	Barchart \| Table
Spo25987	0.65	Barchart \| Table
Spo00362	0.65	Barchart \| Table
Spo11657	0.65	Barchart \| Table
Spo03184	0.65	Barchart \| Table
Spo08407	0.65	Barchart \| Table
Spo03107	0.65	Barchart \| Table
Spo02979	0.65	Barchart \| Table
Spo08245	0.65	Barchart \| Table
Spo07149	0.65	Barchart \| Table
Spo06170	0.65	Barchart \| Table
Spo23549	0.65	Barchart \| Table
Spo21323	0.65	Barchart \| Table
Spo24425	0.65	Barchart \| Table
Spo21254	0.65	Barchart \| Table
Spo21144	0.65	Barchart \| Table
Spo24818	0.65	Barchart \| Table