Spo13270 (gene)

Overview
NameSpo13270
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
LocationSpoScf_03172 : 1214 .. 2965 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGAATGGTGGGTCGTTCCCTAGAAAACTAGCACAGTGTAGGATTTGCCATGATGAAGATGAATCTTCGAACATGGAATCGCCATGTTCTTGTTGCGGTAGCTTGAAGGTTTGTTTCTTTGGAACATATTCAAGTTGATAATGTCATGTAGTAGTTGATCATAACTCGTATATCACTGAAGTTGTTTGTGTTGGCTTGTTTACAAGATTATTCTGATATAGGAGGATGTGTTGTATTGTTTTCCGGCTATCATTCTTATTGCCTATTGAATGGGTTATGGTGATGATAATTGAATCTTAATTTTTGAATGAATGCAGTATGCTCACCATAGATGTGTACAGATGTGGTGCAACCAAAAGGGTGACACTGTCTGTGAGATCTGCCTGCAGGTTCTCTTTAACCTTCTCTGATATTTTTTTTCCTGTTTGTGGTTTAATAGTTTGGTTAACAAAGATAACTATCCACTCTATTTACTATTTAGTATCTTTGATTTTATGAGGCTGCAGCCATTCAAGGCTGGTTATACCGTGCCACCCCCTAGATTGCCCTTTGCTGTCATTCCAGTGCGTTTGAGGTACCTCTCGCCTCTGTGTACTTCCATGCCAAGATGTCTTGTGTCTGAGTAACTTGTATATCTCTACAATGATGTGCTTGTATGCCATTAAACATTTCTTCTAACTTGTACAGGGAACCTTGGGAGTTCTCAACGAGTAATCAATATGCTCATCCATCAATAGTTGCTGCTGAAAATTTCTTCGATCATAGAGTTGATGACTTTACAGCTCCGACTGCAAGCATAATCTGTTGTCGGATCATTACAATCATAGTAATCTCTCTTCCTCATTGTTTTCTGCTGATTAACACCAATCCTATCCTTATTGGGGTTTTGGAGTATCAAACATCAACATTCTACAAATTTTATTATGTTCTCAGTCGATACAGTCATGTTTAGTAGCAATTAATATATAATATGGAATCAAACTGATAATGCTGTTGTTGTTTGCAAGCAGTTTATGGTTCTGGTTGTTCTACGCCATACTCTTCCTATTGTATATAACGGGGCTGGAGAATACTCTTTTACCTTATACACGGTGAGTCGTGAGTTACCTTCAATTCATCCCTTTTATAAATGCATAATTCACTATAATGTTGAGTATATTAAGATGCCTGAAACCGCTTGCAGTTATTGATGCTGAGGACCATTGCGATTCTTCTGCCAATGTTTGTCATGCTTAAAGCATGCAGCGTTGTTCGGCATCATCGGAGACACCGACACGCACTTTATCATGCTACATCAGATGAAGAAAATGAGCTAGCGCAGACGCAGATATCAGCTCATATTATCCGTATTCAGTAATTACCATGATCATCTAAAGTGAAGACATTCACTGTGGCAATTTAAGATTCATCAGAATTGCCAACTCAACTGAATGTTCTTTTGTCAAACAACGGAATGTATATATTCTTGACAAAAGCGCTATTGTGGAAGTCAGAGGAAACAAGGATTAAATTGGCCAACATATGACTTCATCCGAGGATTCTCCAGATGTAAATAGTAATAGTAGTACTCAGAATCTGTATATAAAACTCAGCTAACAGTAGTATTGATTGATTCAAATGGCTATAAAATATCAACCATTATGTGTATACGGTTCCGTTTCCCTGGGATAATCAGGCTGGAAGTTACCAACATACAAGCACAACATGTTGCTATGGCTAATGTACCACTCCAAACAACTTCCCTCC

mRNA sequence

ATGGATGTGAATGGTGGGTCGTTCCCTAGAAAACTAGCACAGTGTAGGATTTGCCATGATGAAGATGAATCTTCGAACATGGAATCGCCATGTTCTTGTTGCGGTAGCTTGAAGTATGCTCACCATAGATGTGTACAGATGTGGTGCAACCAAAAGGGTGACACTGTCTGTGAGATCTGCCTGCAGCCATTCAAGGCTGGTTATACCGTGCCACCCCCTAGATTGCCCTTTGCTGTCATTCCAGTGCGTTTGAGGGAACCTTGGGAGTTCTCAACGAGTAATCAATATGCTCATCCATCAATAGTTGCTGCTGAAAATTTCTTCGATCATAGAGTTGATGACTTTACAGCTCCGACTGCAAGCATAATCTGTTGTCGGATCATTACAATCATATTTATGGTTCTGGTTGTTCTACGCCATACTCTTCCTATTGTATATAACGGGGCTGGAGAATACTCTTTTACCTTATACACGTTATTGATGCTGAGGACCATTGCGATTCTTCTGCCAATGTTTGTCATGCTTAAAGCATGCAGCGTTGTTCGGCATCATCGGAGACACCGACACGCACTTTATCATGCTACATCAGATGAAGAAAATGAGCTAGCGCAGACGCAGATATCAGCTCATATTATCCGTATTCAGTAATTACCATGATCATCTAAAGTGAAGACATTCACTGTGGCAATTTAAGATTCATCAGAATTGCCAACTCAACTGAATGTTCTTTTGTCAAACAACGGAATGTATATATTCTTGACAAAAGCGCTATTGTGGAAGTCAGAGGAAACAAGGATTAAATTGGCCAACATATGACTTCATCCGAGGATTCTCCAGATGTAAATAGTAATAGTAGTACTCAGAATCTGTATATAAAACTCAGCTAACAGTAGTATTGATTGATTCAAATGGCTATAAAATATCAACCATTATGTGTATACGGTTCCGTTTCCCTGGGATAATCAGGCTGGAAGTTACCAACATACAAGCACAACATGTTGCTATGGCTAATGTACCACTCCAAACAACTTCCCTCC

Coding sequence (CDS)

ATGGATGTGAATGGTGGGTCGTTCCCTAGAAAACTAGCACAGTGTAGGATTTGCCATGATGAAGATGAATCTTCGAACATGGAATCGCCATGTTCTTGTTGCGGTAGCTTGAAGTATGCTCACCATAGATGTGTACAGATGTGGTGCAACCAAAAGGGTGACACTGTCTGTGAGATCTGCCTGCAGCCATTCAAGGCTGGTTATACCGTGCCACCCCCTAGATTGCCCTTTGCTGTCATTCCAGTGCGTTTGAGGGAACCTTGGGAGTTCTCAACGAGTAATCAATATGCTCATCCATCAATAGTTGCTGCTGAAAATTTCTTCGATCATAGAGTTGATGACTTTACAGCTCCGACTGCAAGCATAATCTGTTGTCGGATCATTACAATCATATTTATGGTTCTGGTTGTTCTACGCCATACTCTTCCTATTGTATATAACGGGGCTGGAGAATACTCTTTTACCTTATACACGTTATTGATGCTGAGGACCATTGCGATTCTTCTGCCAATGTTTGTCATGCTTAAAGCATGCAGCGTTGTTCGGCATCATCGGAGACACCGACACGCACTTTATCATGCTACATCAGATGAAGAAAATGAGCTAGCGCAGACGCAGATATCAGCTCATATTATCCGTATTCAGTAA

Protein sequence

MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTASIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSVVRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13270.1Spo13270.1mRNA


Homology
[Close]
BLAST of Spo13270.1 vs. NCBI nr
Match: gi|902191112|gb|KNA11771.1| (hypothetical protein SOVF_132070 [Spinacia oleracea])

HSP 1 Score: 445.7 bits (1145), Expect = 4.700e-122
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC
Sbjct: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120
           LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA
Sbjct: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120

Query: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180
           SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV
Sbjct: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180

Query: 181 VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ 216
           VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ
Sbjct: 181 VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ 215
[Close]
BLAST of Spo13270.1 vs. NCBI nr
Match: gi|731315954|ref|XP_010693624.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 379.0 bits (972), Expect = 5.400e-102
Identity = 179/218 (82.11%), Postives = 196/218 (89.91%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MDVNGGSFPRKLAQCRICHDEDE S ME+PC+CCGSLKYAH RCVQMWCNQKG+TVCEIC
Sbjct: 10  MDVNGGSFPRKLAQCRICHDEDEPSKMEAPCACCGSLKYAHRRCVQMWCNQKGNTVCEIC 69

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120
            Q F  GYTVPPPRLPFAVIPV LREPWE++ SNQY HPSIVAA+ FFDHR+DD+TAPTA
Sbjct: 70  QQQFMPGYTVPPPRLPFAVIPVPLREPWEYARSNQYNHPSIVAAQTFFDHRLDDYTAPTA 129

Query: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180
           SIICCRIITIIF+VLVV+RHTLP+V NGAG+YSFTLY LLMLRTI +LLPMFVMLKACS+
Sbjct: 130 SIICCRIITIIFIVLVVVRHTLPVVLNGAGDYSFTLYMLLMLRTIGVLLPMFVMLKACSI 189

Query: 181 VRHHRRHRH---ALYHATSDEENELAQTQISAHIIRIQ 216
           +RHHRRHR     LYH TSDEENEL Q +I+AHIIRIQ
Sbjct: 190 IRHHRRHRQIPAVLYHGTSDEENELVQPEIAAHIIRIQ 227
[Close]
BLAST of Spo13270.1 vs. NCBI nr
Match: gi|747098290|ref|XP_011097148.1| (PREDICTED: uncharacterized protein LOC105176135 isoform X1 [Sesamum indicum])

HSP 1 Score: 238.4 bits (607), Expect = 1.100e-59
Identity = 117/222 (52.70%), Postives = 156/222 (70.27%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           +D+N GS P KLA+CRICHDEDE SNME PCSC GSLKYAHH+CVQ WCN+KGDT+CEIC
Sbjct: 33  LDLNLGSSPGKLAECRICHDEDEDSNMEIPCSCRGSLKYAHHKCVQRWCNEKGDTICEIC 92

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAA-----ENFFDHRVDDF 120
            Q FK GYT PPP   +  +P+  R  W  S S+   H S +A      ENF D   D++
Sbjct: 93  HQQFKPGYTAPPPLFHYGGVPMNFRGDWTISRSDM--HDSELAEMVSRDENFLDPYFDEY 152

Query: 121 TAPTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVM 180
             PT+ S+ICCR++ +I +VL+ LRHTLP +  GAGEYS +L+TLLMLR + ILLP+++M
Sbjct: 153 PIPTSRSLICCRVVAVILIVLLALRHTLPFIIYGAGEYSISLFTLLMLRMVGILLPIYIM 212

Query: 181 LKACSVVRHHRRHRHALYH--ATSDEENELAQTQISAHIIRI 215
           +KA + ++  R H+ +      +S++ENELAQ Q  +H+I +
Sbjct: 213 VKALTAIQRRRNHQESPIFPLPSSEKENELAQHQQHSHLIHV 252
[Close]
BLAST of Spo13270.1 vs. NCBI nr
Match: gi|1009128326|ref|XP_015881170.1| (PREDICTED: uncharacterized protein LOC107417121 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 236.9 bits (603), Expect = 3.300e-59
Identity = 121/208 (58.17%), Postives = 155/208 (74.52%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           +DVN  S P KL +CRICHDEDE+SNME+PCSCCGSLKYAH +CVQ WCN+KGDT+CEIC
Sbjct: 46  IDVNMRS-PCKLVECRICHDEDEASNMETPCSCCGSLKYAHRKCVQRWCNEKGDTICEIC 105

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIV----AAENFFDHRVDDFT 120
            Q F+ GYT PPP   +  IP+  R  WE S  + + +P  +    A  ++ D   D++ 
Sbjct: 106 RQQFRPGYTAPPPLFHYGGIPMNFRGNWEVSRRDLH-NPGFIAMVSAERDYMDTDFDEYA 165

Query: 121 APTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVML 180
           AP++ S+ICCRI+ IIFMVL+VLRHTLPI+ +GAGEYS TL+TLLMLRTI ILLP+++M+
Sbjct: 166 APSSRSLICCRIVAIIFMVLLVLRHTLPIIISGAGEYSMTLFTLLMLRTIGILLPVYIMV 225

Query: 181 KACSVV--RHHRRHRHALYHATSDEENE 202
           KA + +  R HR+  H L  ATSDEEN+
Sbjct: 226 KAFTAIQRRRHRQDSH-LPLATSDEEND 250
[Close]
BLAST of Spo13270.1 vs. NCBI nr
Match: gi|590652324|ref|XP_007033119.1| (RING/FYVE/PHD zinc finger superfamily protein [Theobroma cacao])

HSP 1 Score: 236.5 bits (602), Expect = 4.300e-59
Identity = 116/211 (54.98%), Postives = 150/211 (71.09%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MD N GS P KL +CRICHDEDE  NME PCSC GSLKYAH +CVQ WCN+KGDT+CEIC
Sbjct: 48  MDENVGSSPSKLVECRICHDEDEDLNMEIPCSCRGSLKYAHRKCVQRWCNEKGDTICEIC 107

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAH---PSIVAAENFFDHRVDDFTA 120
            Q F+ GYT PPP   +  +P+  R  WE S  +  A      +    +F +   DD++A
Sbjct: 108 HQQFRPGYTAPPPLFHYGGVPMNFRGNWEISRRDLPAPRFITMVTTDRDFLESDFDDYSA 167

Query: 121 PTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLK 180
           P++ S+ICCR+I IIFMVL+VLRHTLPI+ +GAG+YS TL+TLLMLRT+ ILLP+++M+K
Sbjct: 168 PSSRSLICCRVIAIIFMVLLVLRHTLPIIISGAGDYSLTLFTLLMLRTVGILLPIYIMVK 227

Query: 181 ACSVVRHHRRHRHALYH-ATSDEENELAQTQ 207
           A + ++  R H+   +  A SDEE+EL Q Q
Sbjct: 228 AFTAIQRRRHHQDPRFSLAASDEESELPQLQ 258
[Close]
BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_132070 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 3.300e-122
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC
Sbjct: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120
           LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA
Sbjct: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120

Query: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180
           SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV
Sbjct: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180

Query: 181 VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ 216
           VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ
Sbjct: 181 VRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ 215
[Close]
BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CY04_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g027450 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.800e-102
Identity = 179/218 (82.11%), Postives = 196/218 (89.91%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MDVNGGSFPRKLAQCRICHDEDE S ME+PC+CCGSLKYAH RCVQMWCNQKG+TVCEIC
Sbjct: 10  MDVNGGSFPRKLAQCRICHDEDEPSKMEAPCACCGSLKYAHRRCVQMWCNQKGNTVCEIC 69

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTA 120
            Q F  GYTVPPPRLPFAVIPV LREPWE++ SNQY HPSIVAA+ FFDHR+DD+TAPTA
Sbjct: 70  QQQFMPGYTVPPPRLPFAVIPVPLREPWEYARSNQYNHPSIVAAQTFFDHRLDDYTAPTA 129

Query: 121 SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSV 180
           SIICCRIITIIF+VLVV+RHTLP+V NGAG+YSFTLY LLMLRTI +LLPMFVMLKACS+
Sbjct: 130 SIICCRIITIIFIVLVVVRHTLPVVLNGAGDYSFTLYMLLMLRTIGVLLPMFVMLKACSI 189

Query: 181 VRHHRRHRH---ALYHATSDEENELAQTQISAHIIRIQ 216
           +RHHRRHR     LYH TSDEENEL Q +I+AHIIRIQ
Sbjct: 190 IRHHRRHRQIPAVLYHGTSDEENELVQPEIAAHIIRIQ 227
[Close]
BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Match: A0A061EGA0_THECC (RING/FYVE/PHD zinc finger superfamily protein OS=Theobroma cacao GN=TCM_019300 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.000e-59
Identity = 116/211 (54.98%), Postives = 150/211 (71.09%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MD N GS P KL +CRICHDEDE  NME PCSC GSLKYAH +CVQ WCN+KGDT+CEIC
Sbjct: 48  MDENVGSSPSKLVECRICHDEDEDLNMEIPCSCRGSLKYAHRKCVQRWCNEKGDTICEIC 107

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAH---PSIVAAENFFDHRVDDFTA 120
            Q F+ GYT PPP   +  +P+  R  WE S  +  A      +    +F +   DD++A
Sbjct: 108 HQQFRPGYTAPPPLFHYGGVPMNFRGNWEISRRDLPAPRFITMVTTDRDFLESDFDDYSA 167

Query: 121 PTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLK 180
           P++ S+ICCR+I IIFMVL+VLRHTLPI+ +GAG+YS TL+TLLMLRT+ ILLP+++M+K
Sbjct: 168 PSSRSLICCRVIAIIFMVLLVLRHTLPIIISGAGDYSLTLFTLLMLRTVGILLPIYIMVK 227

Query: 181 ACSVVRHHRRHRHALYH-ATSDEENELAQTQ 207
           A + ++  R H+   +  A SDEE+EL Q Q
Sbjct: 228 AFTAIQRRRHHQDPRFSLAASDEESELPQLQ 258
[Close]
BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Match: D7TSV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01980 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.200e-59
Identity = 122/220 (55.45%), Postives = 152/220 (69.09%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MDV+ G   R L QCRICHDEDE SNME PCSC GSLKYAH  CVQ WCN+KG+T CEIC
Sbjct: 48  MDVDIGPSQRILVQCRICHDEDEDSNMEVPCSCAGSLKYAHRGCVQRWCNEKGNTTCEIC 107

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAA----ENFFDHRVDDFT 120
            Q F+  YT PPP   +  IP+  R  WE S  +   HP  +A      NF D  +D++ 
Sbjct: 108 HQQFRPNYTAPPPLFHYGGIPMNFRGNWEVSRRDA-NHPRFIAMVASDRNFLDTDIDEYP 167

Query: 121 APTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVML 180
           AP + S+ICCRI+ IIFM+L+VLRHTLPI+ +GAGEYSFTL+TLLMLR I ILLP+++M+
Sbjct: 168 APNSRSVICCRIVAIIFMILLVLRHTLPIIISGAGEYSFTLFTLLMLRAIGILLPVYIMV 227

Query: 181 KACSVVRHHRRHRHALYHATSDEENELAQTQISAHIIRIQ 216
           KAC+  +  RRH+    +  SDEENE+   Q    II+I+
Sbjct: 228 KACTAFQ-RRRHQQDARNLPSDEENEM---QPQPRIIQIR 262
[Close]
BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Match: D7T8W0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04590 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.800e-56
Identity = 114/220 (51.82%), Postives = 149/220 (67.73%), Query Frame = 1 

		  

Query: 1   MDVNGGSFPRKLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEIC 60
           MD   GS PRKL +CRIC DEDE SNME+PCSCCGSLKYAH  CVQ WCN+KG+T+CEIC
Sbjct: 58  MDFKHGSSPRKLVECRICQDEDEDSNMETPCSCCGSLKYAHRSCVQRWCNEKGNTMCEIC 117

Query: 61  LQPFKAGYTVPPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAA----ENFFDHRVDDFT 120
            Q FK GYT PPP   F  IP+ LR  WE S   +  +P  +A      NF D   ++FT
Sbjct: 118 QQQFKPGYTAPPPLFQFRGIPINLRGNWEIS-RGELNNPRFIAMVSTDRNFLDPDYNEFT 177

Query: 121 APTA-SIICCRIITIIFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVML 180
             T+ S++CCR + IIFMVL++LRHTLP++ NGA EY+F L+ L++LRT  I+LP+++ML
Sbjct: 178 TSTSRSMMCCRSVAIIFMVLLILRHTLPVMINGAEEYTFPLFMLVLLRTAGIILPIYIML 237

Query: 181 KACSVV-RHHRRHRHALYHATSDEENELAQTQISAHIIRI 215
           +A + + R  R+      +A++DEE E    Q   HII +
Sbjct: 238 RAVTAIQRRPRQQDPPTPYASTDEETEQPALQPQTHIIHV 276
[Close]
BLAST of Spo13270.1 vs. ExPASy Swiss-Prot
Match: MARH2_RAT (E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.600e-6
Identity = 19/50 (38.00%), Postives = 27/50 (54.00%), Query Frame = 1 

		  

Query: 15  CRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPF 65
           CRICH+     N+ SPC C G+L   H  C++ W +    + CE+C   F
Sbjct: 64  CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
[Close]
BLAST of Spo13270.1 vs. ExPASy Swiss-Prot
Match: MARH2_MOUSE (E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.600e-6
Identity = 19/50 (38.00%), Postives = 27/50 (54.00%), Query Frame = 1 

		  

Query: 15  CRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPF 65
           CRICH+     N+ SPC C G+L   H  C++ W +    + CE+C   F
Sbjct: 64  CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
[Close]
BLAST of Spo13270.1 vs. ExPASy Swiss-Prot
Match: MARHB_HUMAN (E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2 SV=3)

HSP 1 Score: 52.0 bits (123), Expect = 9.500e-6
Identity = 20/78 (25.64%), Postives = 39/78 (50.00%), Query Frame = 1 

		  

Query: 15  CRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVPPPR 74
           C+IC    E   + +PC C GS++Y H  C+  W +++G   CE+C   +          
Sbjct: 170 CKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYH--------- 229

Query: 75  LPFAVIPVRLREPWEFST 93
               VI +++++P ++ +
Sbjct: 230 ----VIAIKMKQPCQWQS 234
[Close]
BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 182.2 bits (461), Expect = 3.400e-46
Identity = 96/199 (48.24%), Postives = 129/199 (64.82%), Query Frame = 1 

		  

Query: 12  LAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVP 71
           +A+CRICHDED  SNME+PCSC GS+KYAH RCVQ WCN+KGDT CEIC Q FK  YT P
Sbjct: 56  MAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAP 115

Query: 72  PPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTASIICCRIITII 131
           PP L    +P+  R  W  S   ++   ++V A++ F  +    ++ T S ICCR + +I
Sbjct: 116 PPLLELGHVPLHFRGNWGIS-QREHRFITVVPADSTFIDQPYPLSS-TTSFICCRSLVLI 175

Query: 132 FMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSVVRHHRRHRH-A 191
           FM L++LRHTLP+V  G+  + F L+TLL LR + I+LP++V+ KA +  R H R    +
Sbjct: 176 FMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSRTLDTS 235

Query: 192 LYHATSDEENE---LAQTQ 207
               +SDEE +   L QTQ
Sbjct: 236 PSDDSSDEETDSWRLPQTQ 252
[Close]
BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.500e-41
Identity = 84/190 (44.21%), Postives = 119/190 (62.63%), Query Frame = 1 

		  

Query: 11  KLAQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTV 70
           K  QCRICHDEDE +NM++PCSC G+LK+AHH CVQ WCN+KGDTVCEIC Q +K GYT 
Sbjct: 50  KFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTA 109

Query: 71  PPPRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAENFFDHRVDDFTAPTASIICCRIITI 130
           P     +  I +     W     +      +   +   DH +  F +PT S+ICCR+I +
Sbjct: 110 PRQLFHYTGISMNFGSDWGIEGLDLRNPYFLTWGDADDDHDLYSFHSPT-SLICCRLIAL 169

Query: 131 IFMVLVVLRHTLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSVVRHHRRHRHA 190
           +F++L+ LRH+LP++  G  ++S TL  L ++RT+ ILL  +V  K+  V++  R+ R  
Sbjct: 170 LFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCRQERDT 229

Query: 191 -LYHATSDEE 200
            L   +SDEE
Sbjct: 230 RLSGFSSDEE 238
[Close]
BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 3.100e-31
Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 1 

		  

Query: 14  QCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVPPP 73
           +CRIC +ED   N+ESPCSC GSLKYAH +CVQ WCN+KGDT CEIC + ++ GYT PPP
Sbjct: 77  ECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTAPPP 136

Query: 74  RLPFAVIPVRLREPWEFSTSNQYAHPSIV----AAENFFDHRVDDFTAPTAS-IICCRII 133
             P     + + E W          P I+    A  +FFD   D++    +S    CR  
Sbjct: 137 P-PADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFCRSA 196

Query: 134 TIIFMVLVVLRHTLPIVYNGAGEYS---FTLYTLLMLRTIAILLPMFVMLKACSVVRHHR 193
            +I M L++LRH L +  N + +        + L MLR    LLP ++M  A S+++  R
Sbjct: 197 ALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQRRR 256

Query: 194 RHRHALYHATSD 198
           + + A   A ++
Sbjct: 257 QRQEAAALAAAE 267
[Close]
BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 6.900e-31
Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 1 

		  

Query: 14  QCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVPPP 73
           +CRIC +ED + N+E+PC+C GSLKYAH +CVQ WCN+KGD  CEIC QP++ GYT PPP
Sbjct: 68  ECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHGYTAPPP 127

Query: 74  RLPFAVIPVRLREPWEFSTSNQYAHPSIV----AAENFFDHRVDDFTAPTAS-IICCRII 133
             P   I + + + WE         P I+    A  +F +   D+++   +S    CR  
Sbjct: 128 PPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAAFCRSA 187

Query: 134 TIIFMVLVVLRHTLPIVYNGAGEYSFT-LYTLLMLRTIAILLPMFVMLKACSVVRHHRRH 193
            +I M L++LR  L +  N   E   T  ++L +LR    LLP ++M  A  +++  R+ 
Sbjct: 188 ALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQRRRQR 247

Query: 194 RHALYHATSD 198
           + A   A ++
Sbjct: 248 QEAAALAAAE 256
[Close]
BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 9.100e-31
Identity = 73/189 (38.62%), Postives = 107/189 (56.61%), Query Frame = 1 

		  

Query: 13  AQCRICHDEDESSNMESPCSCCGSLKYAHHRCVQMWCNQKGDTVCEICLQPFKAGYTVPP 72
           A+CRIC DE +  N+ESPC+C GSLKYAH +CVQ WCN+KG+T+CEIC QP++AGYT PP
Sbjct: 55  AECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSPP 114

Query: 73  PRLPFAVIPVRLREPWEFSTSNQYAHPSIVAAE---NFFDHRVDDFTA-PTASIICCRII 132
           P        + +   W  S  +      +  AE      +   DD+TA  T+     R  
Sbjct: 115 PPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFRSA 174

Query: 133 TIIFMVLVVLRH--TLPIVYNGAGEYSFTLYTLLMLRTIAILLPMFVMLKACSVVRHHRR 192
            +I M L++LRH  T+P   +   +   ++ +L +LR  + LLP ++M  A S++   R+
Sbjct: 175 ALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHRRRQ 234

Query: 193 HRHALYHAT 196
            + A   AT
Sbjct: 235 RQEAADLAT 243
The following BLAST results are available for this feature:
BLAST of Spo13270.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902191112|gb|KNA11771.1|4.7e-122100.hypothetical protein SOVF_1320... [more]
gi|731315954|ref|XP_010693624.1|5.4e-10282.1PREDICTED: E3 ubiquitin-protei... [more]
gi|747098290|ref|XP_011097148.1|1.1e-5952.7PREDICTED: uncharacterized pro... [more]
gi|1009128326|ref|XP_015881170.1|3.3e-5958.1PREDICTED: uncharacterized pro... [more]
gi|590652324|ref|XP_007033119.1|4.3e-5954.9RING/FYVE/PHD zinc finger supe... [more]
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BLAST of Spo13270.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZ17_SPIOL3.3e-122100.Uncharacterized protein OS=Spi... [more]
A0A0J8CY04_BETVU3.8e-10282.1Uncharacterized protein OS=Bet... [more]
A0A061EGA0_THECC3.0e-5954.9RING/FYVE/PHD zinc finger supe... [more]
D7TSV4_VITVI5.2e-5955.4Putative uncharacterized prote... [more]
D7T8W0_VITVI1.8e-5651.8Putative uncharacterized prote... [more]
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BLAST of Spo13270.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MARH2_RAT5.6e-638.0E3 ubiquitin-protein ligase MA... [more]
MARH2_MOUSE5.6e-638.0E3 ubiquitin-protein ligase MA... [more]
MARHB_HUMAN9.5e-625.6E3 ubiquitin-protein ligase MA... [more]
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BLAST of Spo13270.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G01275.13.4e-4648.2RING/FYVE/PHD zinc finger supe... [more]
AT5G38070.12.5e-4144.2RING/FYVE/PHD zinc finger supe... [more]
AT5G62460.13.1e-3138.5RING/FYVE/PHD zinc finger supe... [more]
AT3G47550.36.9e-3137.3RING/FYVE/PHD zinc finger supe... [more]
AT1G14260.19.1e-3138.6RING/FYVE/PHD zinc finger supe... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 15..60
score: 1.6
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 14..61
score: 3.6
IPR011016Zinc finger, RING-CH-typePROFILEPS51292ZF_RING_CHcoord: 7..67
score: 20
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 12..65
score: 8.0
IPR022143Protein of unknown function DUF3675PFAMPF12428DUF3675coord: 67..178
score: 3.0
NoneNo IPR availablePANTHERPTHR23012:SF89SUBFAMILY NOT NAMEDcoord: 1..214
score: 6.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 13..64
score: 2.37

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009408 response to heat
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0019538 protein metabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:1902358 sulfate transmembrane transport
biological_process GO:0005983 starch catabolic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0009788 negative regulation of abscisic acid-activated signaling pathway
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006457 protein folding
biological_process GO:0006574 valine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0046950 cellular ketone body metabolic process
biological_process GO:0009832 plant-type cell wall biogenesis
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0015827 tryptophan transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0015804 neutral amino acid transport
biological_process GO:0015810 aspartate transmembrane transport
biological_process GO:0009688 abscisic acid biosynthetic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006547 histidine metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0006699 bile acid biosynthetic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006525 arginine metabolic process
biological_process GO:0019260 1,2-dichloroethane catabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0043132 NAD transport
biological_process GO:0009611 response to wounding
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0006857 oligopeptide transport
biological_process GO:0042128 nitrate assimilation
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0006554 lysine catabolic process
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0007018 microtubule-based movement
biological_process GO:0009904 chloroplast accumulation movement
biological_process GO:0006560 proline metabolic process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0009308 amine metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0007623 circadian rhythm
biological_process GO:0009396 folic acid-containing compound biosynthetic process
biological_process GO:0043648 dicarboxylic acid metabolic process
biological_process GO:0005977 glycogen metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0000025 maltose catabolic process
biological_process GO:0009811 stilbene biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0006826 iron ion transport
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0015793 glycerol transport
biological_process GO:0009992 cellular water homeostasis
biological_process GO:0010106 cellular response to iron ion starvation
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0009060 aerobic respiration
biological_process GO:0006816 calcium ion transport
biological_process GO:0006833 water transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0009744 response to sucrose
biological_process GO:0009749 response to glucose
biological_process GO:0009750 response to fructose
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0007275 multicellular organism development
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009639 response to red or far red light
biological_process GO:0050789 regulation of biological process
biological_process GO:0009791 post-embryonic development
biological_process GO:0009987 cellular process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009414 response to water deprivation
biological_process GO:0009651 response to salt stress
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009966 regulation of signal transduction
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005871 kinesin complex
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005874 microtubule
cellular_component GO:0005737 cytoplasm
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0000785 chromatin
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005773 vacuole
cellular_component GO:0016020 membrane
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005618 cell wall
cellular_component GO:0005730 nucleolus
cellular_component GO:0048046 apoplast
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005788 endoplasmic reticulum lumen
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0004134 4-alpha-glucanotransferase activity
molecular_function GO:0004029 aldehyde dehydrogenase (NAD) activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
molecular_function GO:2001070 starch binding
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0010297 heteropolysaccharide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0016207 4-coumarate-CoA ligase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0015250 water channel activity
molecular_function GO:0015254 glycerol channel activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0047911 galacturan 1,4-alpha-galacturonidase activity
molecular_function GO:0015172 acidic amino acid transmembrane transporter activity
molecular_function GO:0051724 NAD transmembrane transporter activity
molecular_function GO:0016833 oxo-acid-lyase activity
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0015175 neutral amino acid transmembrane transporter activity
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0008271 secondary active sulfate transmembrane transporter activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0080048 GDP-D-glucose phosphorylase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004419 hydroxymethylglutaryl-CoA lyase activity
molecular_function GO:0016161 beta-amylase activity
molecular_function GO:0015293 symporter activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo156910.79Barchart | Table
Spo264390.78Barchart | Table
Spo157070.78Barchart | Table
Spo101420.77Barchart | Table
Spo045920.77Barchart | Table
Spo063300.77Barchart | Table
Spo121080.76Barchart | Table
Spo017960.76Barchart | Table
Spo023540.76Barchart | Table
Spo136470.76Barchart | Table
Spo016970.75Barchart | Table
Spo246770.75Barchart | Table
Spo213780.75Barchart | Table
Spo263350.75Barchart | Table
Spo153070.74Barchart | Table
Spo010870.74Barchart | Table
Spo136430.74Barchart | Table
Spo055480.74Barchart | Table
Spo241560.74Barchart | Table
Spo217110.73Barchart | Table
Spo020770.73Barchart | Table
Spo038990.73Barchart | Table
Spo055110.73Barchart | Table
Spo075790.73Barchart | Table
Spo184840.73Barchart | Table
Spo209990.72Barchart | Table
Spo112010.72Barchart | Table
Spo046330.72Barchart | Table
Spo006930.72Barchart | Table
Spo167510.72Barchart | Table
Spo172030.72Barchart | Table
Spo017210.72Barchart | Table
Spo030150.71Barchart | Table
Spo152930.71Barchart | Table
Spo280820.71Barchart | Table
Spo122960.71Barchart | Table
Spo017240.71Barchart | Table
Spo250920.71Barchart | Table
Spo183810.71Barchart | Table
Spo254440.71Barchart | Table
Spo113970.71Barchart | Table
Spo268720.71Barchart | Table
Spo199740.71Barchart | Table
Spo149480.71Barchart | Table
Spo126870.70Barchart | Table
Spo217490.70Barchart | Table
Spo058980.70Barchart | Table
Spo005610.70Barchart | Table
Spo089210.70Barchart | Table
Spo098460.70Barchart | Table
Spo102800.70Barchart | Table
Spo112060.70Barchart | Table
Spo141330.70Barchart | Table
Spo172380.70Barchart | Table
Spo152560.70Barchart | Table
Spo128890.70Barchart | Table
Spo248310.70Barchart | Table
Spo114410.69Barchart | Table
Spo182170.69Barchart | Table
Spo011740.69Barchart | Table
Spo150310.69Barchart | Table
Spo078130.69Barchart | Table
Spo073010.69Barchart | Table
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