Spo13409 (gene) | SpinachBase

Overview


Name	Spo13409
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Cyclin-related family protein
Location	chr2 : 41625913 .. 41635215 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTGGATATCGCTAATTTTGCCGAACATGCCCCCATAATAATATAATATACTGCATATACCAGGTCGAAGGTCTCATGTCCGTCCATATTCTTCCCAACATCCTCCACTCTCTCGACGCCCGAGCTCAGACTCTGAAACTGACGCCTAACCAGTGACCACCTCAAGCCCTAATTTGTCGTCAAATATTTCAACAACAAATTCCGATTGCGTTTCCGATCCCGATTCCGTTTCTGATTTCAATCTTGATCATCGTTCTTCTTTAAGAATCTTCCCTCGTCCTCTTTGATCCAGGTTTCCATCGTAATCCCTGTATTATTTCATTCTATTCTTCAAAATTAATTTGCTTTAATCTACTACATTCGTTTGTACTTGAATGCCGATTGAATGTGTATATTAAGTGTTCTATGCTTGTGATTTTGACAGGGTTATAGAATGAACATTCAAAATTAGTACTAGCTGGATATAAACTACTCGAATTTAGCTTGTTACTGAGCTGCATTGCCTGAATTTTGGAAACCCCTTTTATGGGTTTCTTATGTTTTGTATTAGGGTTCAGACTTTCGATTTTGGTACCACAAATTTAGAATTGGTAAAAGTTTCAAGGGCCTAAAATATTTTCTGTGACCAATTTTTGGGATTAGTTAAGGGTCTTTTTTATTTTTTTGACAAAAGGACTACAAACAAGCAAACAAAACAAAAACTAAAACCGATGCCGAAGAAGCTGACGCCTATGAGCTGAAGCCGCCAGGTCATGAGCAGGCCGAATCATAGAATGAGAGACTTTCAGCACAGAAAACCCCACAGAAAACCCACGGAACCCAGAAAGTAGAGAACGAAGGTCTTTCACCAACCACAACACAACCATTGGAGCAATACATTTAGAAAAGACAAGGCAAACAAGAATAGCGGAATCAGAGTAGAGAAGAATCCGCATATAACCCCGCCTAGAAGCCATACGAACCACATATAAACAAGCTAACAACTCAGCCTGAAGCGCACAACCAAGCACGCAAGCCTGAGCACCTCCTCCTAAGGTAGCTAAAGACACCGGATCCCGAAGAATCCAACCCACCCCAGCCTGATTTGAAACGGGCATCCAAGCCCCATCCAAAATAATACAAATATCAATGGCAGGGCGAATATCAAACCTACCCAAGGAATGAGGATGAGAAATGGCCGAAGATGCCAAAGCTAATGTATGAACTGGGGCATGAGATTCACAATGGTGACGGAGGTCACGAACTGCAGAACAACGATCCATCCACCCCTGCGAATAACCAGAAGCGCACCTGGATCCCAAGGCGCGTAACGGAAACACATATCATTCCTAACAATCCAAATTCCCCAGAGAGAGGAAACAAAAGCGTCCAGAAGGCGGTTAGAGGAGGAAGACCTGGACAGAGTCCTCACAAAACAAGCACACCAATTGGCAAAGGAACCAGGAGAAGAGGAAGGCCACAAAGGAGCCACAACACCGTTATTCCAAAAATTGGCAAGCACGGAACAATCCCTAAATAAATGAGAAGGCACCTCCTGCTCCATATGACACAAAGAGCAAGACGGGTCCACATCCATGCCACGAAGCCTAAGTTTCCCACCCAACAGAAGACCGCCATGCAACATTTTCCATAAGAAAATTTTAAACTTTGGAAGAATAGCGAGGCCCCAGAAATGTTTCCACTAGAAGTCGGGAGGATCAGGCAAAGTAGAAGCAACACTGGGACCAGAGCGGAGAATCATAGCATACGCCGACCTAACTGAGAATAAACCTTTCCAGCACATCGTCCTCCTCAGAAGACGTGGCCGTTCAAGAGCCATAATGTTGTTGGCCGTGGTCTCCGAGAAAAGATGACGGACCACAGCTGCATCCCACGCGTAAGAACGCAGATCAATAAGAGAGGAAACATGAGTTGGACAATCCAACCCAACAAGAGAATCTTTGAAAGAAATCAGCTTATTGGAGACCTAGACATCCTGAGTAATACGAATGGTCGAGTTAGCACCCGACTTCCACGAATGGTCGAGTTAGCACCCGACTTCCAGGCAATGCCATCATTCAACACTTGGAAACACTTGGAAACCCTGAGAGATGCTCCGAACCCCAAGAAGGCCGAGTTACCCTAGGAGAAGCATTGCGAATAGATACCGTAGGATAGCGAGCCTTGAACAAGCGGGAAATTAGGAGCTGAGGATGATGAACAATACGCCAAGCAGATTTGGCTAGCAACGCCTGATTAAAAGGACCAATACTACGAATACCCAAACCTCCCATACCCTTAGGACGATGGAGGGCCGAAGAAGGAACCAAAGTCATACCCCGCGACCCAACAGAAGACCTCCACCAGAAACGAAGACACAAACTATCAATCCTATCACAAAGAAACCTCAAAGTGCAATTGATTGAAGGCTACAAAGAAACCTCAAAGTGCAAAGCTAAAGCATCAGTATGAAACCTCAAAGTGGGATTAGTTAAGGGTTGAAAACTTGCAATTGATTGAAAGAAAAGCGTTTCCTTATGGGTTAAAAAGGAATGCTCTTTGACTTATATTTTATTTTTCAAAAGTTTTTTTTTTTTGCCCGAGGAACCTTCTCTTTACTGGTCTTATTTATTCGCTGAACATTAGAGATCCTGTATGCAATTTAGACATGGGTATGGGCGTTAGAGATCCTGTCGACATGGGTATGGGCGTTAGAGATCCTGTCGACACGGGTATGGGGGGCGGCATTGGGTAGATATCATAGTGTTAGTCATGACAATATTCAAACTAAGGACAGAGAGACCTGTCCTGGAATTGGACACGGGTGCCGAACATCATTCGTGAAACATATTTTCATTTCTAAAAGACTACGTTTATCTTTTCACATTACACATACATATGCCTGGATTTTGGATTGTCTATTTTGCTAGTTTAGGTTGAAATTCTTGTATAAAGCCTAAGTAGATCATGTATAACACGAATTTCTTCTCGCTTCTCCCTCCCCCTCCATACTGTATATTGTTCTAAAATTATGTAGAATTGTAGATCGAGATACTTGAGATGTCAAGGTAGAATTGAAGGGTCGAGGTAAATGATTAATCACAAGGGCTTCTCTCGGACCTAATTAAGCGCTTTTCCCTAGAGCTTCGCACTTGAGCGCTAAAGCGCGCTTTTTTAAACACTGACTGTAAATCTAGTTTCTTGGGAGTTTAGGGTTTAGATCGAATATCTATATTCTAATGTATCTTATAAGCTGCATACAACAAAGTCGATTTTAGCCATTTTATGTATAGATACTTGGAAAAAAGATCTTCACTTATGACAAAGTAAATTTTTGTCATTTGTTTTTTGTCATTCCTTTTGTTTGATCTTATAAATTTCAGTGTGCTTGGTAAGAAACATCATGACTGGCACTTAGATATGGTACTGTCTCCTACTTGGGGAATATGTAACTTGATGACTATGAATATGTTACTCTCATAAAAGTTCCTAAAGTTAATGTATCCTGATTAGATGATTTTGGGCAACACCCTCCATGATCATTGGAAAGGTTGCTTAACTCCGCAGTTTTTATGACAGTTTCATGCTGATTCTTTATTGCACAAGTATTATGTTCTAGAATGCCTCTAGCTTATGTATATATATGCGTATTTCTTTTTTCTCCTATTCTTTTTGTTGTGAGGTTTGAGAATTCACCACTGATCAAAATAACTTGTCAATTTCTGTATATTTTGACTTTAACTTGTTTACCATCAGAATGATATTGTCTAATTCTCTAGCTGTGAAACTAATAGCTAGTTGAGTTTTATTCAGATTGGTTTTTAAGTCAAAATGTCCGATAGTAAAGGTAAAGTACCTAGGGAGAGAAGTCCCAGCAGACTAAAATCAGAAGTAGGGGATAAGGATGGAGATAAAAAGCACATGCATCAACTTCAAGATGCTTTAGCTCTTGAGAGCTTGCCAGCTTCTGACTCTAAGCAAGAGGTTAAAGGTGCAAGCTCCATGTTGGATAGCAAGAATAATGGAAAAGGTGAAAGAACCGGTCATTCAAATACAACAGCAGTCCCTCGTCGATCTTATCATCAGGTTTTTCTGAAATAAATTTCTGTTTAATTACTTCAATTTTCAGATTTTCTATTGCTATCATTTATTTCTGCAATGATTTCATATGTATAGTTCATCTCTTCAGTCCATCTTTTGTGCTCTGAATTTCCAGCGTTTGGGTTAAAGGATTTCCATTACTTCTCTGAGGCCTGTGTTCATATATCCTTGAACATTCGTGCGCTATTATGCTTCTGTTACGTTTCTGTCCTTTTTTGGGCAATTAAATGAAATGATTTTATAACCAAAAGAATATTTTTGCTACTAAGAAAGTAGCAGAGATTATACACAAAAACTAACAGATAAGTAGATACAACAACAACAACAACAACAACAACAACAACAACAACAACAAAGCCTTAGTCCCAACATGATTTGGGGTCGGCTAACATGAATCGTCGTAGGAGATCGTCAAAAAAACAAGGAAGAGAAAGTGGAATTAATGAAAGTAAGATAAGAGAAAAATGTATATATATTATAGAAGAAATATTGTAAGAGATAATAAAAATAAGTAAAGTTTAAAATAAATGAATAAGTAAAATAAGTATATTTCAAAATAGCATGTAAATTAAAAAAAAAATTAAAGAATAAAAAACCTCAACATAGGAAAGAAAACACAAGCTCAGGCCAGCTCTGTAATCAAAAATAGTCTCCACTCCTTCCTTTATTTATATGTCTTTGTATGTGTAATTTCTGTATACACCTGTTTGTACCGTAACTTATGACTTTTGTCAAAACTAAAGTGGTAATATTTTCTTTTCTTATGTTTTGTACACTAAGGGTTTGTTTGTTTCAACTTATTTTTACTTAGGTTGACTTATCTCAGCGAAAATAATTTAAAATAAATTTAGCAAAAATAATTTTTTTTAATACAATTTAACAGACATAAGTTCTTTTCTGCAAAAATAAGTTCAGTTAAGTCAAATTTAGTTGAACCAAACAGAGCCTAACTTATGTTTGTGCACCATGAGAAGGTTAAATCGCATTCTTCCAAGTTATGATATTAATAAAGGATCTGGCATCCTTTATCATTTTGTTAGACCATCAACAGAATAATTCTTATTCTTCCCCTCTCAGAATTGTTCCCTAATTCTTGCTATTCTCTTTTAACTGAATACTTCTGGATTCGTTATTATTTGTTTGTTTTAATGCTGGAAAATGGTGTAGAGTACTGCAGATTAAGGAAACTATATGCGATCTGCACTATTATCAGGAAACAGGCATTCTTTCTCTCCTATAAAGTATCTTCTATTCTTGTGAAAGACTATGCTTGCAGTCTTTAGGTTTCCAATGGATTGAACTCTTCATTTTTTTTTAAAGTTTCCATTGGGTTGAAGTGGTGAACTCTGTTGTAAATCGAGTGTTTTCAGGAAGATAGGTGTTGCTTGTGTTTTGATCACTGTATGTCCAGTCAAGGGATATCTTGGAATTTGCCGCTAAATTTCTTTCCACGTTCCAACTCATTTAGCTTGTATTGGCTAGTGTGTGTACATGTGTGTCAGTGTGTGCGCATGTGTTTTAAATGTGTGCTTGCACAAGTTACGAAGTCTAGGAATTGCTTTACTTTCCCTCTTGTATTTTATGAGTGAAAATATCAATATTTCTCAGCCATAGATATGTGCATGGATATGAAAACGACTTCCTTATTCTGAATGTGCTATTTGTTCAAATAGGCATATCTATGAGTTTGGTCACTTGGTGGTTATTCAGTGTTTGCAAATCCATTTACTGGGCTGAACTAGCAGGATACTTGTTCGTCCCATGACTTTCAGTGCTCCTGTGTAAGTGTAACTATATTAGGCTTGCCTCTTCATGTCTTGTAACAGCATGATGACCGTCGTACTGCCGCCCGAGATGGCAGCCGCTCTGGACGCAGGTCGACATCTGGTGGGTTTCTTGACTTTTGGATGCTTTTCTCATTTATCTTTTGATTGTAGTTGCAATTTTGATACCTTTCCATTTCAAAATATTCTTAGTTTTGAGGTTATATGAGTCTCTCTGACAATGTACTACTTGGTTTCTCATAGCATGGTAATTAAGCTACGATAAACTCTTTAACTTAGCACCAAGGATATTGTCATATGTCCATAGGGAAATTCATGGGCGCGACCAGGCTAGATTATAAAATGAGGAACGTGAGATTAATTGGTATAGTATTTTGTGTCCTCTCTCCAGTCTTCTGTTTTGACTGTAAGATTTACACCATTACTGCCTCGTGTTTTGGTGTAGAATTTTTGGTAGTAACTTTTGGCAATATCTTTAATATCATTAGGATCTACTGCTTATCGCTGATCCTTAGCTAATCGGACATAGTCCTACATGTCCCCTACTAATCATTATGAATTCGGTATTGAGTTATTATTTTCTCAACATTTTATCACTTTTGTTATGCATTTAAATTTGTTGGTTAACTTTCTTTATTCTATGTTTTACGTAGAACGTGGATGGTGGAAAGATTCAAGAGGCGAAGACCGAGCAGCACATAGATCAGCACCTTCTGATCCAAAAGTAAGGGAGGGAAAATCTCGAGCAGAAGATAGTAAGTTTTGACAATTTCTTTAATATCAGTAGGATCTACTGCTTATCACTGATCCTTAGTGAAACGGAAACAGTCCTATATATCCCCCCTACTAAACACTACAAATTGAATATGTAGTTATTCTTTTCTCAACTTCTGTCATTTTTGTTATACAGTTATACATTTGAATTTGTTTGTTAACTTCTTTTCTATTCTGTGTTTTACGTAGAACGTGGATGGTGGATAGATTCCAGAGGCGAAGACCGAGCATCACATAGATCAGGACCTTCTGATCCAAAGGTGAGGGAGGGAAAATCCGGAGCTGAAGGTGGTGACAGTCAGGTCTGGCGACATGATACATTCATAGAAGCGGAGGGTGATGCACAACCTAGTAAAAAAAGACGTCCATTTCGAGAAGAGAAACTTCCAGTGAAGTCTGAGGATGTGGATAATGCTGTTGTTCCTGAACGTAGTAAGGTTTCCCATCCTACTGGGGGGACTGCAAGGTGGGAACAAAAAGCTCATGATCGTCGCCCGTTGGAAAGGAATGAGCATGATCGAGCATATTTAAGGGAGAGGTCGTTTTCGAACCGAGGACGAGTAGAAAATACTGGTTTTCCTTCCAGGGACAGGTTTAATGGTGTTAGTAATAATGGGAAATTCATTGGAAGGGAGAATTTTGGTGGAAGAAAAGGTTATCATTCGAGTGGCGGTCGGGTTGAGAAGTGGAAGCATGACTTGTATGACGAGGCTAATAGAAGCCCAACCCCTAAAAAGGAGGAAGATCCTGTTGCAAAGGTGGAAGCATTACTTTCTTTGTAGATTACTACTATTTGAATCACTGTTGGTTCGAAGATTACTGTTGGTTCTTGACTGAGGGACTTGATAGTTTTTGTGGGATTTTAATGCAGTTGTGTCTGGTGATTAATGGCGTAATGCTAACAGGTTCAATGCCTTATAGGTTATGGTACGGACTTGTATCTAGTTTGAACATTCTGGAGATGTTTGCTTATTGCTGTTGTTGATGTTGATCCTGCATTTCTCCATGCTATCTAAGTTAACATTTTGAGCAGAAGTTTAATACCATTCTGCAGTGTCAACCTTGAAGGTTGGTTCGTTGGTTCGTTCTACTTTTTTAGCTGCTGCCAAATTTTATCTGATGACAAACAAGATGACTGTAAATTATACAATCAAGGTTATGTAGGTTACACTTTAGAAGAGTTGCTGGAATTACATACATTCGCATGAAATTAACAAGGTAAAGATTACTAAGCTACATTTACACTTGCCGAAAGTTACCAAAAAATGAAGGCTTGAACATTACATTTCGGGTTCAGGGTACTAGACCCACCGCCCACGGCCTCACTGCTCAATTTGCACGTTCAAGTATGTTTGATGATTTGTTTAACGATTAGTTCCTTGTTGAAGGTGCCCCAGTATGTTTTTCTCCCCAGTCAACATTTCTGCGAGTCCTAACAAGAGACCAGAATATGTTATTTCAGAAAGGTAAAGCCATTTAATTTGTTCAGATAAGATGATTTACCATTGGTATAGTGACGACAATCATGGTCGCCAATGCGTAAGTCGGTTTCCCAGGTGCTGTTGAATGTATAAGCGGCTTCTACAGCATTTGGGAACTTGGATTGGCCTATGTACCAACATCTTTTCTTGGGCAGTTTGCTAATTTTTCTTACCAGAATAGTACCTGATCACTCAGTATTCTTAAACTAAATTATGTTGACACATTGATGCGGACTGTATATGTTGATGTTGAGCAAGGGAAATGTAGGCTCACCTGGGATAGGTCTACCAGTCAAAGCAGCCAGAGCCACATATATGTTTTCAGGATCCTGAGGCTGAAAATCAAACACTATACCCTGCACAACAAAAACCCATTCCTACAGGATTAAGGATTAAGGATTAAGGATTAAGGATTAAGGACAAGTTCATCATGCATGTCTAAGATTACCATCAAATATTTATTCCAAAAATAACCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGNCCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGATGCCATAAGTTGAGAGAATAGGCAGCAGACATAAGTATCTGAGCAGGTCCCTTGCTCGCTCTCAGTGCCGTCGTTGCCACATAAATTTCATCTCTACCCCTGCCTGAGGCCGTTAATGTCGGATTGCTTGGAAGCCCGGTCGNCCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGATGCCATAAGTTGAGAGAATAGGCAGCAGACATAAGTATCTGAGCAGGTCCCTTGCTCGCCCTCAGTGCCGTCGTTGCCACATAAATTTCATCTCTACCCCTGCCTGAGGCCGTTAATGTCGGATTGCTTGGAAGCCCGGTCGCCATTTTTTTTTAGTGAATTCATAAAATACGGGGTAAGCTTCTTATTAAATACTCCACTCACTAGTGGTCAACAGTGGAGGACCTACCTTCTACAACGGGTCACTAAATTCGAATATCAACTGTCTTTGTCTCAAGTAGATTAAAATTCTGGGATGGAATTAGAGACTTGAGGTTGAATCTTGTCTACTCGTTAGTTTGTCATCATAAACTTTTTTTTAACTCTCTTTGC

mRNA sequence

TATTGGATATCGCTAATTTTGCCGAACATGCCCCCATAATAATATAATATACTGCATATACCAGGTCGAAGGTCTCATGTCCGTCCATATTCTTCCCAACATCCTCCACTCTCTCGACGCCCGAGCTCAGACTCTGAAACTGACGCCTAACCAGTGACCACCTCAAGCCCTAATTTGTCGTCAAATATTTCAACAACAAATTCCGATTGCGTTTCCGATCCCGATTCCGTTTCTGATTTCAATCTTGATCATCGTTCTTCTTTAAGAATCTTCCCTCGTCCTCTTTGATCCAGATTGGTTTTTAAGTCAAAATGTCCGATAGTAAAGGTAAAGTACCTAGGGAGAGAAGTCCCAGCAGACTAAAATCAGAAGTAGGGGATAAGGATGGAGATAAAAAGCACATGCATCAACTTCAAGATGCTTTAGCTCTTGAGAGCTTGCCAGCTTCTGACTCTAAGCAAGAGGTTAAAGGTGCAAGCTCCATGTTGGATAGCAAGAATAATGGAAAAGGTGAAAGAACCGGTCATTCAAATACAACAGCAGTCCCTCGTCGATCTTATCATCAGCATGATGACCGTCGTACTGCCGCCCGAGATGGCAGCCGCTCTGGACGCAGGTCGACATCTGAACGTGGATGGTGGAAAGATTCAAGAGGCGAAGACCGAGCAGCACATAGATCAGCACCTTCTGATCCAAAAGTAAGGGAGGGAAAATCTCGAGCAGAAGATAAACGTGGATGGTGGATAGATTCCAGAGGCGAAGACCGAGCATCACATAGATCAGGACCTTCTGATCCAAAGGTGAGGGAGGGAAAATCCGGAGCTGAAGGTGGTGACAGTCAGGTCTGGCGACATGATACATTCATAGAAGCGGAGGGTGATGCACAACCTAGTAAAAAAAGACGTCCATTTCGAGAAGAGAAACTTCCAGTGAAGTCTGAGGATGTGGATAATGCTGTTGTTCCTGAACGTAGTAAGGTTTCCCATCCTACTGGGGGGACTGCAAGGTGGGAACAAAAAGCTCATGATCGTCGCCCGTTGGAAAGGAATGAGCATGATCGAGCATATTTAAGGGAGAGGTCGTTTTCGAACCGAGGACGAGTAGAAAATACTGGTTTTCCTTCCAGGGACAGGTTTAATGGTGTTAGTAATAATGGGAAATTCATTGGAAGGGAGAATTTTGGTGGAAGAAAAGGTTATCATTCGAGTGGCGGTCGGGTTGAGAAGTGGAAGCATGACTTGTATGACGAGGCTAATAGAAGCCCAACCCCTAAAAAGGAGGAAGATCCTGTTGCAAAGGTGGAAGCATTACTTTCTTTGTAGATTACTACTATTTGAATCACTGTTGGTTCGAAGATTACTGTTGGTTCTTGACTGAGGGACTTGATAGTTTTTGTGGGATTTTAATGCAGTTGTGTCTGGTGATTAATGGCGTAATGCTAACAGGTTCAATGCCTTATAGGTTATGGTACGGACTTGTATCTAGTTTGAACATTCTGGAGATGTTTGCTTATTGCTGTTGTTGATGTTGATCCTGCATTTCTCCATGCTATCTAAGTTAACATTTTGAGCAGAAGTTTAATACCATTCTGCAGTGTCAACCTTGAAGGTTGGTTCGTTGGTTCGTTCTACTTTTTTAGCTGCTGCCAAATTTTATCTGATGACAAACAAGATGACTGTAAATTATACAATCAAGGTTATGTAGGTTACACTTTAGAAGAGTTGCTGGAATTACATACATTCGCATGAAATTAACAAGGTAAAGATTACTAAGCTACATTTACACTTGCCGAAAGTTACCAAAAAATGAAGGCTTGAACATTACATTTCGGGTTCAGGGTACTAGACCCACCGCCCACGGCCTCACTGCTCAATTTGCACGTTCAAGTATGTTTGATGATTTGTTTAACGATTAGTTCCTTGTTGAAGGTGCCCCAGTATGTTTTTCTCCCCAGTCAACATTTCTGCGAGTCCTAACAAGAGACCAGAATATGTTATTTCAGAAAGGTAAAGCCATTTAATTTGTTCAGATAAGATGATTTACCATTGGTATAGTGACGACAATCATGGTCGCCAATGCGTAAGTCGGTTTCCCAGGTGCTGTTGAATGTATAAGCGGCTTCTACAGCATTTGGGAACTTGGATTGGCCTATGTACCAACATCTTTTCTTGGGCAGTTTGCTAATTTTTCTTACCAGAATAGTACCTGATCACTCAGTATTCTTAAACTAAATTATGTTGACACATTGATGCGGACTGTATATGTTGATGTTGAGCAAGGGAAATGTAGGCTCACCTGGGATAGGTCTACCAGTCAAAGCAGCCAGAGCCACATATATGTTTTCAGGATCCTGAGGCTGAAAATCAAACACTATACCCTGCACAACAAAAACCCATTCCTACAGGATTAAGGATTAAGGATTAAGGATTAAGGATTAAGGACAAGTTCATCATGCATGTCTAAGATTACCATCAAATATTTATTCCAAAAATAACCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGNCCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGATGCCATAAGTTGAGAGAATAGGCAGCAGACATAAGTATCTGAGCAGGTCCCTTGCTCGCTCTCAGTGCCGTCGTTGCCACATAAATTTCATCTCTACCCCTGCCTGAGGCCGTTAATGTCGGATTGCTTGGAAGCCCGGTCGNCCTGGAAGGTGGAAGGAGATGTAGGAGTGATGGAAGGTTTGATGATGAGCATGAAATGCTGAAGATGCCATAAGTTGAGAGAATAGGCAGCAGACATAAGTATCTGAGCAGGTCCCTTGCTCGCCCTCAGTGCCGTCGTTGCCACATAAATTTCATCTCTACCCCTGCCTGAGGCCGTTAATGTCGGATTGCTTGGAAGCCCGGTCGCCATTTTTTTTTAGTGAATTCATAAAATACGGGGTAAGCTTCTTATTAAATACTCCACTCACTAGTGGTCAACAGTGGAGGACCTACCTTCTACAACGGGTCACTAAATTCGAATATCAACTGTCTTTGTCTCAAGTAGATTAAAATTCTGGGATGGAATTAGAGACTTGAGGTTGAATCTTGTCTACTCGTTAGTTTGTCATCATAAACTTTTTTTTAACTCTCTTTGC

Coding sequence (CDS)

ATGTCCGATAGTAAAGGTAAAGTACCTAGGGAGAGAAGTCCCAGCAGACTAAAATCAGAAGTAGGGGATAAGGATGGAGATAAAAAGCACATGCATCAACTTCAAGATGCTTTAGCTCTTGAGAGCTTGCCAGCTTCTGACTCTAAGCAAGAGGTTAAAGGTGCAAGCTCCATGTTGGATAGCAAGAATAATGGAAAAGGTGAAAGAACCGGTCATTCAAATACAACAGCAGTCCCTCGTCGATCTTATCATCAGCATGATGACCGTCGTACTGCCGCCCGAGATGGCAGCCGCTCTGGACGCAGGTCGACATCTGAACGTGGATGGTGGAAAGATTCAAGAGGCGAAGACCGAGCAGCACATAGATCAGCACCTTCTGATCCAAAAGTAAGGGAGGGAAAATCTCGAGCAGAAGATAAACGTGGATGGTGGATAGATTCCAGAGGCGAAGACCGAGCATCACATAGATCAGGACCTTCTGATCCAAAGGTGAGGGAGGGAAAATCCGGAGCTGAAGGTGGTGACAGTCAGGTCTGGCGACATGATACATTCATAGAAGCGGAGGGTGATGCACAACCTAGTAAAAAAAGACGTCCATTTCGAGAAGAGAAACTTCCAGTGAAGTCTGAGGATGTGGATAATGCTGTTGTTCCTGAACGTAGTAAGGTTTCCCATCCTACTGGGGGGACTGCAAGGTGGGAACAAAAAGCTCATGATCGTCGCCCGTTGGAAAGGAATGAGCATGATCGAGCATATTTAAGGGAGAGGTCGTTTTCGAACCGAGGACGAGTAGAAAATACTGGTTTTCCTTCCAGGGACAGGTTTAATGGTGTTAGTAATAATGGGAAATTCATTGGAAGGGAGAATTTTGGTGGAAGAAAAGGTTATCATTCGAGTGGCGGTCGGGTTGAGAAGTGGAAGCATGACTTGTATGACGAGGCTAATAGAAGCCCAACCCCTAAAAAGGAGGAAGATCCTGTTGCAAAGGTGGAAGCATTACTTTCTTTGTAG

Protein sequence

MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWRHDTFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDRRPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSGGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13409.1	Spo13409.1	mRNA

Homology

[Close]

BLAST of Spo13409.1 vs. NCBI nr
Match: gi|902230561|gb|KNA21894.1| (hypothetical protein SOVF_039080 [Spinacia oleracea])

HSP 1 Score: 652.1 bits (1681), Expect = 5.200e-184
Identity = 334/336 (99.40%), Postives = 334/336 (99.40%), Query Frame = 1


		  
Query: 1   MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD 60
           MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD
Sbjct: 1   MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD 60

Query: 61  SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA 120
           SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA
Sbjct: 61  SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA 120

Query: 121 HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 180
           HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR
Sbjct: 121 HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 180

Query: 181 HDTFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR 240
           HD FIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR
Sbjct: 181 HDRFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR 240

Query: 241 RPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG 300
           R LERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG
Sbjct: 241 RQLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG 300

Query: 301 GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 337
           GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL
Sbjct: 301 GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 336

[Close]

BLAST of Spo13409.1 vs. NCBI nr
Match: gi|731355113|ref|XP_010688967.1| (PREDICTED: uncharacterized protein LOC104902762 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 302.8 bits (774), Expect = 7.700e-79
Identity = 186/337 (55.19%), Postives = 223/337 (66.17%), Query Frame = 1


		  
Query: 8   VPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNNGKG 67
           +P ERSP+RL S+ GDK  DKKH  +LQDAL LE  PASD+K E+K AS MLD K NG+G
Sbjct: 1   MPTERSPNRLNSDSGDKKEDKKHRQRLQDALPLELPPASDTKLEIKDASYMLDGKTNGQG 60

Query: 68  ERTGHSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHRSAPS 127
           E    S+ TAVPR  ++ QHDDRRTAARDG RSGRR TSERG WKDS+ E+R  HR+A S
Sbjct: 61  ETINQSDPTAVPRSENFFQHDDRRTAARDGRRSGRRLTSERGLWKDSKDEERTTHRTAYS 120

Query: 128 DPKVREGKSRAE--DKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWRHDTF 187
           DPK RE K R +  D   W       DR +     + P                      
Sbjct: 121 DPKEREEKCRRQGGDNHIW-----RHDRFNDAEADAHPLT-------------------- 180

Query: 188 IEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHP---TGGTARWEQKAHDRR 247
                     KKRRPFREEKLP++SE+V+ A  PE SKV+HP   T  T RWE++A D R
Sbjct: 181 ----------KKRRPFREEKLPMQSENVEKA-APEPSKVAHPASSTVRTGRWEERARDHR 240

Query: 248 PLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGY--HSS 307
           PLERNE DR+ +RERSFS RGR EN+GF SRDRFNG  N+GK+  R+ FGGR+GY  + +
Sbjct: 241 PLERNEQDRSRIRERSFSVRGRAENSGFSSRDRFNGADNDGKYKVRDKFGGRQGYRPNGT 300

Query: 308 GGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 337
           G + EKWKHD++DEANRSPT K +EDPVAKVEALL+L
Sbjct: 301 GTQAEKWKHDMFDEANRSPTSKNDEDPVAKVEALLAL 301

[Close]

BLAST of Spo13409.1 vs. NCBI nr
Match: gi|225428989|ref|XP_002265317.1| (PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis vinifera])

HSP 1 Score: 176.4 bits (446), Expect = 8.300e-41
Identity = 133/334 (39.82%), Postives = 185/334 (55.39%), Query Frame = 1


		  
Query: 6   GKVPRERSPSRLKSEVGDK-DGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNN 65
           GK   ER PS L +  GD  D D+KH  +LQDAL LE+  ASDSK+E +      D K +
Sbjct: 31  GKPETERIPSSLNTTNGDHVDRDQKHRRRLQDALPLEAPLASDSKEETEAVGKESDKKTS 90

Query: 66  GKGERTGHSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHRS 125
           G  +RT  S+   +PR RS+ QHD+R  + + G R   R+ +ERGWW DS+  D    R 
Sbjct: 91  GPRDRTKPSSD--IPRHRSFFQHDERDGSRQAGRRFSHRANTERGWWGDSK--DHHGDR- 150

Query: 126 APSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGD-SQVWRHD 185
              DPK + G   ++D+          ++A++++   D + R+ KS A+G D ++VWRHD
Sbjct: 151 ---DPKDQHGDRDSKDQH--------REKATNKTVTDDTQKRDEKSEAQGSDKNRVWRHD 210

Query: 186 TFIEAEGDAQPSKKRRP-FREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDRR 245
            F E E +  P  ++RP FRE+K+PV  E  D A   E  K SHP         +   R 
Sbjct: 211 GFFEMESNPHPPARKRPAFREKKIPVDHEIADKAAT-EAVKPSHPDRSML---SERGGRN 270

Query: 246 PLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSGG 305
           P      +  +  + +   RG  + +G P+  R+      G F  R+ FGGR+G  S   
Sbjct: 271 PRHLGRPENPFSGDGALPYRGEAQRSGGPA-PRYGSGRGGGNFRERDRFGGRQGQRSGDV 330

Query: 306 RVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLS 336
           RVEKWKHDL+DEANRSP  KKEE+ +AKVEALL+
Sbjct: 331 RVEKWKHDLFDEANRSPVRKKEEEQIAKVEALLA 343

[Close]

BLAST of Spo13409.1 vs. NCBI nr
Match: gi|719970872|ref|XP_010272549.1| (PREDICTED: protein CASC3 [Nelumbo nucifera])

HSP 1 Score: 168.3 bits (425), Expect = 2.300e-38
Identity = 133/342 (38.89%), Postives = 181/342 (52.92%), Query Frame = 1


		  
Query: 6   GKVPRERSPSRLKSEVGD-KDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNN 65
           GK   ER+ S    ++ D KD D+KH  +LQDAL LE+  A +SK     A    D K N
Sbjct: 31  GKPATERTSSDRNLDIIDHKDRDQKHRRRLQDALPLEAPLAPESKVGADIADKDFDRKTN 90

Query: 66  GKGERTGHSNT-TAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHR 125
              + T  S+  T VPR RSY QHD+R +A + G    RR T+ER WW+D          
Sbjct: 91  EFNDGTKRSSDPTEVPRSRSYFQHDERGSAGQGGRSFSRRGTTERRWWRD---------- 150

Query: 126 SAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWRHD 185
                PK + G                 DR S + G +D + ++ K+ ++G D  VW HD
Sbjct: 151 -----PKEQSG-----------------DRESDKGGSNDMRQKDEKTQSKGEDKSVWHHD 210

Query: 186 TFIEAEGDAQPSKKRRP-FREEKLPVKS--EDVDNAVVPERSKVSHPTGGTARWEQKAHD 245
            F + E +A P  K+RP FRE+K+P  S  E +  A     S+   P  G+   E++   
Sbjct: 211 GFFQLEAEAPPQAKKRPAFREKKMPPDSGAEGIKPAESVRPSRPDRPVSGSENREERGGR 270

Query: 246 R-RPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKG--- 305
             R ++R+E  R    +R+   R  V+ +G P R+RF+G S    F GR+ + GR G   
Sbjct: 271 HFRDMDRDE--RPLTGDRAQPYRSEVQRSGIPPRERFSGGSG---FRGRDRYSGRHGEQK 330

Query: 306 -YHSSGGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 337
            Y  +  RVEKWKHDL+DEANRSPTPK EED +AKVEALL+L
Sbjct: 331 QYRHNTYRVEKWKHDLFDEANRSPTPKNEEDQIAKVEALLAL 335

[Close]

BLAST of Spo13409.1 vs. NCBI nr
Match: gi|645261495|ref|XP_008236319.1| (PREDICTED: pre-mRNA-splicing factor CWC22 homolog isoform X2 [Prunus mume])

HSP 1 Score: 162.2 bits (409), Expect = 1.600e-36
Identity = 131/337 (38.87%), Postives = 187/337 (55.49%), Query Frame = 1


		  
Query: 6   GKVPRERSPSRLKSEVGDK-DGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNN 65
           GK  +ER  S+  SE   + D D+KH  +LQD L LES  A+DSK E   +    D K +
Sbjct: 31  GKDEKERVTSKSNSESAKQSDQDQKHQPRLQDTLPLESPLATDSKVENGASRKESDKKPS 90

Query: 66  GKGERTG-HSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHR 125
           G  E T   S+ T VPR RSY QHD+R                      ++R  DR++ R
Sbjct: 91  GHLEGTKLSSDPTDVPRSRSYFQHDERG---------------------NARQVDRSSRR 150

Query: 126 SAPSDPKVREGKSRAEDKRGWWIDS--RGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 185
            + ++             RG W DS  R +DR   ++  +D + R  K   +G +++ WR
Sbjct: 151 GSAAE-------------RGSWRDSKDRHDDRTVSKTTTNDSRPRNEKP--KGDENRTWR 210

Query: 186 HDTFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTG-GTARWEQKAHD 245
           H+ F E E +  P +KR  FRE+K+P++SE+ D     E +K +HP   G+ + E++ ++
Sbjct: 211 HNGFFEMEANPPPERKRPAFREKKIPLESENGDKTTA-EIAKSNHPDAEGSRKREERGNN 270

Query: 246 RRPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRF-NGVSNNGKFIGRENFGGRKGYHS 305
            R L+R+E  + +  ER    RG  +   FPSR+R+ +G   N  + GR+ F GR+G+ S
Sbjct: 271 PRHLDRSE--KQFTGER-LPYRGEAQQGSFPSRERYTDGAGRN--YRGRDRFSGRQGFQS 325

Query: 306 SGGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLS 336
           SGGR EKWKHDLY EANRSPTPK EED +AKVE LL+
Sbjct: 331 SGGRGEKWKHDLYHEANRSPTPKNEEDQIAKVETLLA 325

[Close]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSK1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039080 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 3.600e-184
Identity = 334/336 (99.40%), Postives = 334/336 (99.40%), Query Frame = 1


		  
Query: 1   MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD 60
           MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD
Sbjct: 1   MSDSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLD 60

Query: 61  SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA 120
           SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA
Sbjct: 61  SKNNGKGERTGHSNTTAVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAA 120

Query: 121 HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 180
           HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR
Sbjct: 121 HRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 180

Query: 181 HDTFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR 240
           HD FIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR
Sbjct: 181 HDRFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDR 240

Query: 241 RPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG 300
           R LERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG
Sbjct: 241 RQLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSG 300

Query: 301 GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 337
           GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL
Sbjct: 301 GRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 336

[Close]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMR3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204730 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 5.400e-79
Identity = 186/337 (55.19%), Postives = 223/337 (66.17%), Query Frame = 1


		  
Query: 8   VPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNNGKG 67
           +P ERSP+RL S+ GDK  DKKH  +LQDAL LE  PASD+K E+K AS MLD K NG+G
Sbjct: 1   MPTERSPNRLNSDSGDKKEDKKHRQRLQDALPLELPPASDTKLEIKDASYMLDGKTNGQG 60

Query: 68  ERTGHSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHRSAPS 127
           E    S+ TAVPR  ++ QHDDRRTAARDG RSGRR TSERG WKDS+ E+R  HR+A S
Sbjct: 61  ETINQSDPTAVPRSENFFQHDDRRTAARDGRRSGRRLTSERGLWKDSKDEERTTHRTAYS 120

Query: 128 DPKVREGKSRAE--DKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGDSQVWRHDTF 187
           DPK RE K R +  D   W       DR +     + P                      
Sbjct: 121 DPKEREEKCRRQGGDNHIW-----RHDRFNDAEADAHPLT-------------------- 180

Query: 188 IEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHP---TGGTARWEQKAHDRR 247
                     KKRRPFREEKLP++SE+V+ A  PE SKV+HP   T  T RWE++A D R
Sbjct: 181 ----------KKRRPFREEKLPMQSENVEKA-APEPSKVAHPASSTVRTGRWEERARDHR 240

Query: 248 PLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGY--HSS 307
           PLERNE DR+ +RERSFS RGR EN+GF SRDRFNG  N+GK+  R+ FGGR+GY  + +
Sbjct: 241 PLERNEQDRSRIRERSFSVRGRAENSGFSSRDRFNGADNDGKYKVRDKFGGRQGYRPNGT 300

Query: 308 GGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLSL 337
           G + EKWKHD++DEANRSPT K +EDPVAKVEALL+L
Sbjct: 301 GTQAEKWKHDMFDEANRSPTSKNDEDPVAKVEALLAL 301

[Close]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Match: D7SXQ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00830 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.800e-41
Identity = 133/334 (39.82%), Postives = 185/334 (55.39%), Query Frame = 1


		  
Query: 6   GKVPRERSPSRLKSEVGDK-DGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNN 65
           GK   ER PS L +  GD  D D+KH  +LQDAL LE+  ASDSK+E +      D K +
Sbjct: 31  GKPETERIPSSLNTTNGDHVDRDQKHRRRLQDALPLEAPLASDSKEETEAVGKESDKKTS 90

Query: 66  GKGERTGHSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHRS 125
           G  +RT  S+   +PR RS+ QHD+R  + + G R   R+ +ERGWW DS+  D    R 
Sbjct: 91  GPRDRTKPSSD--IPRHRSFFQHDERDGSRQAGRRFSHRANTERGWWGDSK--DHHGDR- 150

Query: 126 APSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGAEGGD-SQVWRHD 185
              DPK + G   ++D+          ++A++++   D + R+ KS A+G D ++VWRHD
Sbjct: 151 ---DPKDQHGDRDSKDQH--------REKATNKTVTDDTQKRDEKSEAQGSDKNRVWRHD 210

Query: 186 TFIEAEGDAQPSKKRRP-FREEKLPVKSEDVDNAVVPERSKVSHPTGGTARWEQKAHDRR 245
            F E E +  P  ++RP FRE+K+PV  E  D A   E  K SHP         +   R 
Sbjct: 211 GFFEMESNPHPPARKRPAFREKKIPVDHEIADKAAT-EAVKPSHPDRSML---SERGGRN 270

Query: 246 PLERNEHDRAYLRERSFSNRGRVENTGFPSRDRFNGVSNNGKFIGRENFGGRKGYHSSGG 305
           P      +  +  + +   RG  + +G P+  R+      G F  R+ FGGR+G  S   
Sbjct: 271 PRHLGRPENPFSGDGALPYRGEAQRSGGPA-PRYGSGRGGGNFRERDRFGGRQGQRSGDV 330

Query: 306 RVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLS 336
           RVEKWKHDL+DEANRSP  KKEE+ +AKVEALL+
Sbjct: 331 RVEKWKHDLFDEANRSPVRKKEEEQIAKVEALLA 343

[Close]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Match: M5VL67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008588mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.300e-36
Identity = 129/337 (38.28%), Postives = 188/337 (55.79%), Query Frame = 1


		  
Query: 6   GKVPRERSPSRLKSEVGDK-DGDKKHMHQLQDALALESLPASDSKQEVKGASSMLDSKNN 65
           GK  +ER  S++ SE   + D D+KH  +LQD L LES  A+DS+ E   +    D K +
Sbjct: 31  GKDEKERVTSKINSESAKQSDQDQKHQPRLQDTLPLESPLATDSRVENGASRKESDKKPS 90

Query: 66  GKGERTG-HSNTTAVPR-RSYHQHDDRRTAARDGSRSGRRSTSERGWWKDSRGEDRAAHR 125
           G  E T   S+ T VPR +SY QHD+R                      ++R  DR++ R
Sbjct: 91  GHLEGTKLSSDPTDVPRSQSYFQHDERG---------------------NARQVDRSSRR 150

Query: 126 SAPSDPKVREGKSRAEDKRGWWIDS--RGEDRASHRSGPSDPKVREGKSGAEGGDSQVWR 185
            + ++             RG W DS  R +DR   ++  +D + R  K   +G +++ WR
Sbjct: 151 GSAAE-------------RGSWRDSKDRHDDRTVSKTTTNDSRPRNEKP--KGDENRTWR 210

Query: 186 HDTFIEAEGDAQPSKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTG-GTARWEQKAHD 245
           H+ F E E +  P +KR  FRE+K+ ++SE+ D     E +K +HP   G+ + E++ ++
Sbjct: 211 HNGFFEMEANPPPERKRPAFREKKISLESENGDKTTA-ETAKSNHPDAEGSRKREERGNN 270

Query: 246 RRPLERNEHDRAYLRERSFSNRGRVENTGFPSRDRF-NGVSNNGKFIGRENFGGRKGYHS 305
            R L+R+E  + +  ER    RG  +   FPSR+R+ +G S N  + GR+ F GR+G+ S
Sbjct: 271 PRHLDRSE--KQFAGER-LPYRGDAQRGSFPSRERYTDGASRN--YRGRDRFSGRQGFQS 325

Query: 306 SGGRVEKWKHDLYDEANRSPTPKKEEDPVAKVEALLS 336
           SGGR EKWKHDLY EANRSPTPK EED +AKVE LL+
Sbjct: 331 SGGRGEKWKHDLYHEANRSPTPKNEEDQIAKVETLLA 325

[Close]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KV12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000750 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.100e-34
Identity = 143/364 (39.29%), Postives = 187/364 (51.37%), Query Frame = 1


		  
Query: 2   SDSK---GKVPRERSPSRLK---------------SEVGD-KDGDKKHMHQL--QDALAL 61
           SDSK    +  RE SP R K               S V D K+ D+KH  +L  QD +  
Sbjct: 9   SDSKRHRSRFDREPSPKRSKRDRKTLEEKLSRNSSSHVEDNKERDQKHELRLVGQDMIPH 68

Query: 62  ESLPASDSKQEVKGASSMLDSKNNGKGERTGHS-NTTAVPR-RSYHQHDDRRTAARDGSR 121
           ES  A +SK E  GA    +  ++G+   T HS N T VPR RSY QHD+R  A + G  
Sbjct: 69  ESSLALESKPE-GGAGIGANRNSDGRDGGTKHSVNPTEVPRSRSYFQHDERSNAGQVGRS 128

Query: 122 SGRRSTSERGWWKDSRGEDRAAHRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSG 181
            GR +TSERGWWKDS+  D+ +                              DRAS +S 
Sbjct: 129 FGRSATSERGWWKDSKDPDKDS------------------------------DRASGKSL 188

Query: 182 PSDPKVREGKSGAEGGDSQVWRHDTFIEAEGDA-QPSKKRRPFREEKLPVKSEDVDN-AV 241
               + R+ K  A   D     HD   + E DA  P++KR  FRE+K+ V +ED +  A+
Sbjct: 189 TYKSQQRDEKPQAAREDRH---HDGSSKLEVDALTPARKRPAFREKKITVDNEDGEKVAM 248

Query: 242 VPERSK---VSHPTGGTARWEQKAHDRRPLER--NEHDRAYLRERSFSNRGRVENTGFPS 301
           VPE  K   +     G  R E++  D R  E+  N+H    +     S R  ++  G+P 
Sbjct: 249 VPESKKSNDLHQIQEGRERREERGRDPRYSEKLNNKHSNGDMA----SKRDEMKRVGYPV 308

Query: 302 RDRFNGVSNNGKFIGRENFGGRKGYHSSGGRVEKWKHDLYDEANRSPTPKKEEDPVAKVE 336
           R+R+   S  G + GR+ FGGR+GY +SG RVEKWKHDL+ EANRSPTPK EED +AKVE
Sbjct: 309 RERYGNGSGGGNYRGRDRFGGRQGYRTSGTRVEKWKHDLFHEANRSPTPKNEEDQIAKVE 334

[Close]

BLAST of Spo13409.1 vs. TAIR (Arabidopsis)
Match: AT3G19650.1 (cyclin-related)

HSP 1 Score: 62.8 bits (151), Expect = 4.700e-10
Identity = 101/352 (28.69%), Postives = 144/352 (40.91%), Query Frame = 1


		  
Query: 3   DSKGKVPRERSPSRLKSEVGDKDGDKKHMHQLQDALALESLPASD-------SKQEVKGA 62
           +S+   PR R  SR+  E   K   +    + +  L+ + L   D       S+Q ++ A
Sbjct: 6   ESRDSDPR-RHRSRIDREPSPKRSRRDGKPEAERVLSKKDLDVRDGTDTEKNSRQSLRDA 65

Query: 63  SSMLD---SKNNGKGERTGHSNTT-AVPRRSYHQHDDRRTAARDGSRSGRRSTSERGWWK 122
              LD   S+ + + + +GH  TT A P  S                            +
Sbjct: 66  PLELDAHGSRKDSEKKHSGHHETTKAAPHLS----------------------------Q 125

Query: 123 DSRGEDRAAHRSAPSDPKVREGKSRAEDKRGWWIDSRGEDRASHRSGPSDPKVREGKSGA 182
             R    + H    SD KV     R    RG W  SR  D+++ R+G  D K +  K   
Sbjct: 126 VPRSRPYSQHDDRRSDGKVDR---RPTSVRGSWRSSR--DQSNRRAG-DDEKSQHRKDE- 185

Query: 183 EGGDSQVWRHDTFIEAEGDAQP--SKKRRPFREEKLPVKSEDVDNAVVPERSKVSHPTGG 242
              D   WRHD F E++ D Q   S+KR  FRE+K+   +E+  N     R++    T  
Sbjct: 186 ---DKSSWRHDRFRESD-DTQGALSRKRPAFREKKI---AEETGNNTDRTRTEDGKDTNL 245

Query: 243 TARWEQKAHDRRPLERNEHDRAYLRERSFSNRGRVENTGF-----PSRDRFNGVSNNGKF 302
             R + + + R       H+R  +      NR      G        RDRFNG       
Sbjct: 246 NNRRQNERNWRSNTHSERHERPAMGRDRVWNRDDERGAGSRQSYQADRDRFNG------- 301

Query: 303 IGRENFGGRKGYHSSGGRVEK-WKHDLYDEANRSPTPKKEEDPVAKVEALLS 336
                  GR G+  S  R EK W HDL+DEAN+SP    EE+ +AKVEALL+
Sbjct: 306 ------NGRSGFSGSWTRNEKKWDHDLFDEANKSPAKATEEEQIAKVEALLA 301

The following BLAST results are available for this feature:

BLAST of Spo13409.1 vs. NCBI nr
BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
BLAST of Spo13409.1 vs. ExPASy Swiss-Prot
BLAST of Spo13409.1 vs. TAIR (Arabidopsis)

BLAST of Spo13409.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230561\|gb\|KNA21894.1\|	5.2e-184	99.4	hypothetical protein SOVF_0390...	[more]
gi\|731355113\|ref\|XP_010688967.1\|	7.7e-79	55.1	PREDICTED: uncharacterized pro...	[more]
gi\|225428989\|ref\|XP_002265317.1\|	8.3e-41	39.8	PREDICTED: nuclear speckle spl...	[more]
gi\|719970872\|ref\|XP_010272549.1\|	2.3e-38	38.8	PREDICTED: protein CASC3 [Nelu...	[more]
gi\|645261495\|ref\|XP_008236319.1\|	1.6e-36	38.8	PREDICTED: pre-mRNA-splicing f...	[more]

BLAST of Spo13409.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RSK1_SPIOL	3.6e-184	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMR3_BETVU	5.4e-79	55.1	Uncharacterized protein OS=Bet...	[more]
D7SXQ5_VITVI	5.8e-41	39.8	Putative uncharacterized prote...	[more]
M5VL67_PRUPE	7.3e-36	38.2	Uncharacterized protein OS=Pru...	[more]
A0A0A0KV12_CUCSA	3.1e-34	39.2	Uncharacterized protein OS=Cuc...	[more]

BLAST of Spo13409.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13409.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G19650.1	4.7e-10	28.6	cyclin-related	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36364	FAMILY NOT NAMED	coord: 155..336 score: 1.0E-50coord: 6..120 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006308	DNA catabolic process
cellular_component	GO:0016459	myosin complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	motor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005488	binding
molecular_function	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19382	0.73	Barchart \| Table
Spo04021	0.69	Barchart \| Table
Spo26073	0.67	Barchart \| Table
Spo02319	0.66	Barchart \| Table
Spo17082	0.66	Barchart \| Table