Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCTTCATCTTTTACATCGCACCCATTTCTGTCGACTCCATTCTCAAGAAGTCACCAACATCAACCCTCACCATGTTCAAAAACACCACCACCATCTCAACCGCCAAATACTCCGGCGTCCCAAACACCGGTTGAATTAAGTTCAACTTCCTTTGAGAAACCCATAAAACCTATAATAGTGGAAAGAAATACCGGTAATAATGATAGTATAAAAAAGGCAGGTGGTGTAGACTCTACGGATTGGATAGCTTCTTCGTTGACAAGGCGTTTCGGGCTGGGCGCTGGGCTTGCTTGGGTTGGATTTCTTGCTGTTGGGGTTATATCTGAGCAAATCAAAACTCGTATTGAAGTTTCACAACAGCAAGCTAACACAAGGCAACTCTCTTTATTCTTTAATATCACTTCATTTCTACTTGAACATATCACCTTTATTTCATCTAATTAATTTTTATTATTTATTTCCTCATGTGTAGGGATTTGGAGACGGAAGAGGAGGTTATATTACCAAATGGCATAAGGTATATTTTTCACTTCATAGTTACTTAATAATGTAAGCTCCACCACACCTACACTGCCATCTTATTTTATACGGAGTATTTTTTTACAAAGATTTCAACATTAATTGATAATTCTAATGTATTCGTTAAGTAAAAAGGTGTATGTGCATACATGGTTTCTATATTGCTTTGTAAAAATCAGAATGATTGAGAACCTGCTGTAAAAGTAGATATTGAGCCTTGAGCCTTGAGTAATGAGTAATAATAGTTTGTGGCCGGGCGTTGCTCCGAGTTTTACTTTTAGTGGGATTTACTTATTTTAAATATGTGCGTATGTGTGTTATTATCTGATTTCCATGCAAGATCAGTGGCCGATCAACAAACTTCCTTCCCATATCCGAAAATCAAAACAAAGTCGAGTTCTCTTCTTCATGATTAGTTGGTTGTTATACTCTTGTCAATGTTTCCCTTTTCCGCACTCATAATTACACTCCATTACCCTAAGTTTTTTTTATTTTTCAAGCTTAAGTTGAGAAGAGAAGAATTATACATTTATAAGTTAAGTAATTAATTCCCTTTTGTTTTTTTCCCCTTTAATTCATTATTATTCATTTTAAAAAGGTTGTATTTATTATTTAAATAGAAAAATATAACATCATTGTGGCTAGCTAAGATGGTAAGAATGGTAACTTCAAATTCAAGAGGTCTAGTGTTCAATCCTTGCTACATGCTATACTTAGTAGAATAAGGAGGGATCTATGTGGCACATGTACCTTCTTATAACAGTAAGGTCTTGATGAGCATTGTAGACGTGACTTTAATCTATTTTACTAATACGGAGTAATAGACATAAGTTAACACACACAGAGTGTTTTGTCCAACACATGGACATGAAAATGGTACGTACTATGATAGTGCCTAGAGTTGGATTAAAAACATTGTTAAAAGGGTTAAACTTGAAATTACATTCTTCAACTCCTTCCTTGCTACTTGCTACTTGCTACTTGCTACTTGCTACCCCTGACACTTGATCACCTAGCTTCTCTGACACTGACACTGACTCTACCGCTTTTGGAATCAGAGGATATACTGAACTGACATGCATCCTTCCACTTAAGAGTAGCATGCATAAATGGCTAGGTCTTCTGCTTCTTTGGCATCTGTTAAACTCGTACATAAAAACAAACCAGAAATCTGTTGTCCTGCAGTCTATATTTGTTACCTTTTTGTTTTGGGAGTGAGGATAAGGATACATTATAGACAATAAATTTGAGGCAAAAGGATATTTTAATGCTATTAACTTACCTGACATGGTATGAGAATGAATATATTAGTTCCTACACTCAGCAAGATGGATATATTGTTGCTTACATTGTATTTATTATGTATATATATAATTATTTACAAGTTGATGATTATACTATAGGTACTATGAAATGAGAATCGGTGGAGGTGCAAGCCCAAGAGCAGGGGATTTGGTAGTGATAGACTTGAAAGGCAGCGTCAAGGATAGCGGGGAAGTATTTGTTGACACATTCAGTAAGAATAAGAGATCACTAGCTCTTGTAATGGGATCAAGACCATACACAAGAGGAATGTGTCAAGGAATAGAATATGTAGTAAAGACAATGAAGGCAGGAGGTAAAAGAAGAGTTATAGTTCCTCCTAAATTTGGTTATTGTGATAATGGTACTGATTTTGGTTCTGATATCTCTATTCCTCCTTGTGCTACCCTTGACTATATTGTTCAAGTTGATAGAGTTTCTATTGCACCTTCTTGA ATGGCCTCTTCATCTTTTACATCGCACCCATTTCTGTCGACTCCATTCTCAAGAAGTCACCAACATCAACCCTCACCATGTTCAAAAACACCACCACCATCTCAACCGCCAAATACTCCGGCGTCCCAAACACCGGTTGAATTAAGTTCAACTTCCTTTGAGAAACCCATAAAACCTATAATAGTGGAAAGAAATACCGGTAATAATGATAGTATAAAAAAGGCAGGTGGTGTAGACTCTACGGATTGGATAGCTTCTTCGTTGACAAGGCGTTTCGGGCTGGGCGCTGGGCTTGCTTGGGTTGGATTTCTTGCTGTTGGGGTTATATCTGAGCAAATCAAAACTCGTATTGAAGTTTCACAACAGCAAGCTAACACAAGGGATTTGGAGACGGAAGAGGAGGTTATATTACCAAATGGCATAAGGTACTATGAAATGAGAATCGGTGGAGGTGCAAGCCCAAGAGCAGGGGATTTGGTAGTGATAGACTTGAAAGGCAGCGTCAAGGATAGCGGGGAAGTATTTGTTGACACATTCAGTAAGAATAAGAGATCACTAGCTCTTGTAATGGGATCAAGACCATACACAAGAGGAATGTGTCAAGGAATAGAATATGTAGTAAAGACAATGAAGGCAGGAGGTAAAAGAAGAGTTATAGTTCCTCCTAAATTTGGTTATTGTGATAATGGTACTGATTTTGGTTCTGATATCTCTATTCCTCCTTGTGCTACCCTTGACTATATTGTTCAAGTTGATAGAGTTTCTATTGCACCTTCTTGA ATGGCCTCTTCATCTTTTACATCGCACCCATTTCTGTCGACTCCATTCTCAAGAAGTCACCAACATCAACCCTCACCATGTTCAAAAACACCACCACCATCTCAACCGCCAAATACTCCGGCGTCCCAAACACCGGTTGAATTAAGTTCAACTTCCTTTGAGAAACCCATAAAACCTATAATAGTGGAAAGAAATACCGGTAATAATGATAGTATAAAAAAGGCAGGTGGTGTAGACTCTACGGATTGGATAGCTTCTTCGTTGACAAGGCGTTTCGGGCTGGGCGCTGGGCTTGCTTGGGTTGGATTTCTTGCTGTTGGGGTTATATCTGAGCAAATCAAAACTCGTATTGAAGTTTCACAACAGCAAGCTAACACAAGGGATTTGGAGACGGAAGAGGAGGTTATATTACCAAATGGCATAAGGTACTATGAAATGAGAATCGGTGGAGGTGCAAGCCCAAGAGCAGGGGATTTGGTAGTGATAGACTTGAAAGGCAGCGTCAAGGATAGCGGGGAAGTATTTGTTGACACATTCAGTAAGAATAAGAGATCACTAGCTCTTGTAATGGGATCAAGACCATACACAAGAGGAATGTGTCAAGGAATAGAATATGTAGTAAAGACAATGAAGGCAGGAGGTAAAAGAAGAGTTATAGTTCCTCCTAAATTTGGTTATTGTGATAATGGTACTGATTTTGGTTCTGATATCTCTATTCCTCCTTGTGCTACCCTTGACTATATTGTTCAAGTTGATAGAGTTTCTATTGCACCTTCTTGA MASSSFTSHPFLSTPFSRSHQHQPSPCSKTPPPSQPPNTPASQTPVELSSTSFEKPIKPIIVERNTGNNDSIKKAGGVDSTDWIASSLTRRFGLGAGLAWVGFLAVGVISEQIKTRIEVSQQQANTRDLETEEEVILPNGIRYYEMRIGGGASPRAGDLVVIDLKGSVKDSGEVFVDTFSKNKRSLALVMGSRPYTRGMCQGIEYVVKTMKAGGKRRVIVPPKFGYCDNGTDFGSDISIPPCATLDYIVQVDRVSIAPS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13451.1 vs. NCBI nr
Match: gi|902207790|gb|KNA15784.1| (hypothetical protein SOVF_095030 [Spinacia oleracea]) HSP 1 Score: 511.9 bits (1317), Expect = 6.400e-142 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1
BLAST of Spo13451.1 vs. NCBI nr
Match: gi|731375478|ref|XP_010667270.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 391.3 bits (1004), Expect = 1.300e-105 Identity = 204/266 (76.69%), Postives = 228/266 (85.71%), Query Frame = 1
BLAST of Spo13451.1 vs. NCBI nr
Match: gi|848933547|ref|XP_012829441.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like [Erythranthe guttata]) HSP 1 Score: 314.3 bits (804), Expect = 2.000e-82 Identity = 166/268 (61.94%), Postives = 200/268 (74.63%), Query Frame = 1
BLAST of Spo13451.1 vs. NCBI nr
Match: gi|823152314|ref|XP_012475988.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic-like [Gossypium raimondii]) HSP 1 Score: 311.2 bits (796), Expect = 1.700e-81 Identity = 166/258 (64.34%), Postives = 205/258 (79.46%), Query Frame = 1
BLAST of Spo13451.1 vs. NCBI nr
Match: gi|802573709|ref|XP_012068446.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic [Jatropha curcas]) HSP 1 Score: 310.5 bits (794), Expect = 2.800e-81 Identity = 162/255 (63.53%), Postives = 205/255 (80.39%), Query Frame = 1
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9V8_SPIOL (Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_095030 PE=4 SV=1) HSP 1 Score: 511.9 bits (1317), Expect = 4.500e-142 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6I6_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_007700 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 8.800e-106 Identity = 204/266 (76.69%), Postives = 228/266 (85.71%), Query Frame = 1
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Match: A0A022PQB9_ERYGU (Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a011879mg PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.400e-82 Identity = 166/268 (61.94%), Postives = 200/268 (74.63%), Query Frame = 1
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PFB1_GOSRA (Peptidyl-prolyl cis-trans isomerase OS=Gossypium raimondii GN=B456_004G202900 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 1.200e-81 Identity = 166/258 (64.34%), Postives = 205/258 (79.46%), Query Frame = 1
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Match: W9RFH9_9ROSA (Peptidyl-prolyl cis-trans isomerase OS=Morus notabilis GN=L484_017385 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.600e-81 Identity = 165/265 (62.26%), Postives = 209/265 (78.87%), Query Frame = 1
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Match: FK172_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-2 PE=1 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.700e-70 Identity = 142/265 (53.58%), Postives = 191/265 (72.08%), Query Frame = 1
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Match: FK173_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP17-3 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.800e-59 Identity = 105/175 (60.00%), Postives = 140/175 (80.00%), Query Frame = 1
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Match: FK164_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.700e-10 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.100e-7 Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 1
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Match: FK161_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.400e-6 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 1
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Match: AT1G18170.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 267.3 bits (682), Expect = 9.800e-72 Identity = 142/265 (53.58%), Postives = 191/265 (72.08%), Query Frame = 1
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Match: AT1G73655.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 230.7 bits (587), Expect = 1.000e-60 Identity = 105/175 (60.00%), Postives = 140/175 (80.00%), Query Frame = 1
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 65.9 bits (159), Expect = 4.300e-11 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Match: AT4G26555.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 55.1 bits (131), Expect = 7.600e-8 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 1
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Match: AT5G13410.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 49.7 bits (117), Expect = 3.200e-6 Identity = 34/99 (34.34%), Postives = 51/99 (51.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13451.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13451.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13451.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13451.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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