Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTAATTTCTAACCTAAATATATACTCCTTATTTGTTAAGTAAATTAGGAATTATGAAATGAAATTAATAAAATCATCAAAAGAGTAACCCTACCAGCCACTCTCCCTCTAACCTGTCTCACCAACTCACATCTAGAAGTTCTTTCTTTCTCTAAACTTTCTCTCTCTATCCAAATCAATACCCTATAAAAACCCCTTCAATTCCTCAAAAGGGGTCAGCTTTGTTGTTTCACCCAACTCCCTAAAATTAGCTTTGCTCATCATCATAACACCCCCCAAAAAAAAAAAAAATCCAATCCAACTAAAAATAACAAAATTTAACAAATCCCCTTGTATTTTATTTTTCTCAAACAATCTTAAGATTGATAATTTCCCAAAATAACAAAAAAGAATTGATTAATTAATTAATTAATTAGTAAACAAAATGGGGAGGTCCCCTTGTTGTGAGAAAGCTCACACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGGTTGGTTGCATACATTAAGGCTCATGGTGAAGGTTGTTGGCGTTCTCTTCCTAAAGCCGCCGGACTTCTCCGGTGCGGTAAAAGTTGCCGTCTCCGGTGGATTAATTACCTCCGCCCTGATTTGAAGAGGGGTAATTTTACTGAAGAAGAAGATGAACTCATCATCAAGTTGCATAGTCTTCTTGGTAACAAGTAAGTTCTATTTCTCCATCTTTTAATTTATTTTCCCTCTTTTCACCCTACAATGAAAACATTCACCCATGATCATATGGAACAAAACTTGGATAAAATTAGAAAAATTTCCCCTTTACCCCACCATTTTTTGAAACAATTCAGTTCGGAGTTTTTATACTAGACTGAGTGCATATGTATGATAAGTCATACGTTCGTAGAGTTACAGGTTCATATCCCACTCACCTGTTTGTAAATTATAATGCCCATATAGTTCATTCAAACCCAAACTTTTGTTGAAATTGTAAAATAATTTAGTCGAAGATTGTTACAGGTTCAATCACACTCAGCTATTTGTAAATTGTAGTGCCCTTATTGTTCATTCATACCAAAACTTTTGTTGAAATTGTTAAAACATAGATAGATAGGCAGAAAATGTCAAAGTTTGAATTTTTGGTAGAAAACCTTGAAACCCATTTGGAGAAACTAATGAAAATTTGATGTGTGTGTGAAATAGGTGGTCGTTGATAGCAGGAAGATTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACACACATCAAAAGAAAGCTTATAAACAGGGGAATTGACCCTGTTTCACATAGATCAATGAATGAAGCTGCATCAAATCCAGAATCTTCACCAGCAACAGCAACGGCAACAACACCCAATAACTCAACAACAACAACTATCTCATTCTCTGCTCCAATCACAATTCCCAAGAAAGAGGAAGTTTTTGGATTAAAAGATGAGATTTTTAATAATAATAATAATAATCAACAATTACAAGAACATCAACCCAGAAGAAAAACAGAGAGATGCCCAGATTTGAACCTTGATTTGAAAATCAGCCCACCTTATCAACAACAACAACAGCAGAATTCAGAGATGAAAACAGGGACAAGGATTTGCTTTAGTTGCAGTTTAGGGTTGGAAAAAAGTCAACAGGATTGTAATTGCAGTCAAAGTATTAATATGGTTGGTTGCAGTAATAATGGTAGCAGTATTTGTTATGATTTCTTGGGATTGAGTGCTTTGGACTATAGAAGCATGGAGATGATGAAGTGATATACGGAGAACAATTACTTTTTTATAATTTCTTTTTTGAGGATTAACAAATCCTTTTTAGATTATTGGTGTAATTAGTGGTAGAATATATTAACATAAATTCTAATGATTATTTCCCAGGAATACGAAGAATTACAAAGTATGACATCTACTACCTCCGTTCCTAAATGATCTTTACGGTTACTATTTGCACGGTAATTAAGGAATTTTGGTGAACATGTGATGGTGGGGTAACAAATGAAAAATGAGTGGCTATAAATTGTCCAACAATGTGAGTGGGTGGAAACTAATATTAAAGTATTGTGAGTGGGTAATTTATGGTGGGCCAAATAGGAGTAAAAATGGAATAAAGTAGGAGCGTAAAGAACTTTCAGGAACGGACTAAAACGGAAAGCGTAAAGAACTTTTAGGAACGGAG ACTCTAATTTCTAACCTAAATATATACTCCTTATTTGTTAAGTAAATTAGGAATTATGAAATGAAATTAATAAAATCATCAAAAGAGTAACCCTACCAGCCACTCTCCCTCTAACCTGTCTCACCAACTCACATCTAGAAGTTCTTTCTTTCTCTAAACTTTCTCTCTCTATCCAAATCAATACCCTATAAAAACCCCTTCAATTCCTCAAAAGGGGTCAGCTTTGTTGTTTCACCCAACTCCCTAAAATTAGCTTTGCTCATCATCATAACACCCCCCAAAAAAAAAAAAAATCCAATCCAACTAAAAATAACAAAATTTAACAAATCCCCTTGTATTTTATTTTTCTCAAACAATCTTAAGATTGATAATTTCCCAAAATAACAAAAAAGAATTGATTAATTAATTAATTAATTAGTAAACAAAATGGGGAGGTCCCCTTGTTGTGAGAAAGCTCACACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGGTTGGTTGCATACATTAAGGCTCATGGTGAAGGTTGTTGGCGTTCTCTTCCTAAAGCCGCCGGACTTCTCCGGTGCGGTAAAAGTTGCCGTCTCCGGTGGATTAATTACCTCCGCCCTGATTTGAAGAGGGGTAATTTTACTGAAGAAGAAGATGAACTCATCATCAAGTTGCATAGTCTTCTTGGTAACAAGTGGTCGTTGATAGCAGGAAGATTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACACACATCAAAAGAAAGCTTATAAACAGGGGAATTGACCCTGTTTCACATAGATCAATGAATGAAGCTGCATCAAATCCAGAATCTTCACCAGCAACAGCAACGGCAACAACACCCAATAACTCAACAACAACAACTATCTCATTCTCTGCTCCAATCACAATTCCCAAGAAAGAGGAAGTTTTTGGATTAAAAGATGAGATTTTTAATAATAATAATAATAATCAACAATTACAAGAACATCAACCCAGAAGAAAAACAGAGAGATGCCCAGATTTGAACCTTGATTTGAAAATCAGCCCACCTTATCAACAACAACAACAGCAGAATTCAGAGATGAAAACAGGGACAAGGATTTGCTTTAGTTGCAGTTTAGGGTTGGAAAAAAGTCAACAGGATTGTAATTGCAGTCAAAGTATTAATATGGTTGGTTGCAGTAATAATGGTAGCAGTATTTGTTATGATTTCTTGGGATTGAGTGCTTTGGACTATAGAAGCATGGAGATGATGAAGTGATATACGGAGAACAATTACTTTTTTATAATTTCTTTTTTGAGGATTAACAAATCCTTTTTAGATTATTGGTGTAATTAGTGGTAGAATATATTAACATAAATTCTAATGATTATTTCCCAGGAATACGAAGAATTACAAAGTATGACATCTACTACCTCCGTTCCTAAATGATCTTTACGGTTACTATTTGCACGGTAATTAAGGAATTTTGGTGAACATGTGATGGTGGGGTAACAAATGAAAAATGAGTGGCTATAAATTGTCCAACAATGTGAGTGGGTGGAAACTAATATTAAAGTATTGTGAGTGGGTAATTTATGGTGGGCCAAATAGGAGTAAAAATGGAATAAAGTAGGAGCGTAAAGAACTTTCAGGAACGGACTAAAACGGAAAGCGTAAAGAACTTTTAGGAACGGAG ATGGGGAGGTCCCCTTGTTGTGAGAAAGCTCACACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGGTTGGTTGCATACATTAAGGCTCATGGTGAAGGTTGTTGGCGTTCTCTTCCTAAAGCCGCCGGACTTCTCCGGTGCGGTAAAAGTTGCCGTCTCCGGTGGATTAATTACCTCCGCCCTGATTTGAAGAGGGGTAATTTTACTGAAGAAGAAGATGAACTCATCATCAAGTTGCATAGTCTTCTTGGTAACAAGTGGTCGTTGATAGCAGGAAGATTACCAGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACACACATCAAAAGAAAGCTTATAAACAGGGGAATTGACCCTGTTTCACATAGATCAATGAATGAAGCTGCATCAAATCCAGAATCTTCACCAGCAACAGCAACGGCAACAACACCCAATAACTCAACAACAACAACTATCTCATTCTCTGCTCCAATCACAATTCCCAAGAAAGAGGAAGTTTTTGGATTAAAAGATGAGATTTTTAATAATAATAATAATAATCAACAATTACAAGAACATCAACCCAGAAGAAAAACAGAGAGATGCCCAGATTTGAACCTTGATTTGAAAATCAGCCCACCTTATCAACAACAACAACAGCAGAATTCAGAGATGAAAACAGGGACAAGGATTTGCTTTAGTTGCAGTTTAGGGTTGGAAAAAAGTCAACAGGATTGTAATTGCAGTCAAAGTATTAATATGGTTGGTTGCAGTAATAATGGTAGCAGTATTTGTTATGATTTCTTGGGATTGAGTGCTTTGGACTATAGAAGCATGGAGATGATGAAGTGA MGRSPCCEKAHTNKGAWTKEEDDRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLINRGIDPVSHRSMNEAASNPESSPATATATTPNNSTTTTISFSAPITIPKKEEVFGLKDEIFNNNNNNQQLQEHQPRRKTERCPDLNLDLKISPPYQQQQQQNSEMKTGTRICFSCSLGLEKSQQDCNCSQSINMVGCSNNGSSICYDFLGLSALDYRSMEMMK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13499.1 vs. NCBI nr
Match: gi|902227314|gb|KNA20640.1| (hypothetical protein SOVF_050510 [Spinacia oleracea]) HSP 1 Score: 575.5 bits (1482), Expect = 5.100e-161 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo13499.1 vs. NCBI nr
Match: gi|731357756|ref|XP_010690379.1| (PREDICTED: myb-related protein 308 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 422.9 bits (1086), Expect = 4.300e-115 Identity = 220/294 (74.83%), Postives = 245/294 (83.33%), Query Frame = 1
BLAST of Spo13499.1 vs. NCBI nr
Match: gi|124430478|dbj|BAF46265.1| (putative transcription factor [Humulus lupulus]) HSP 1 Score: 355.1 bits (910), Expect = 1.100e-94 Identity = 181/285 (63.51%), Postives = 217/285 (76.14%), Query Frame = 1
BLAST of Spo13499.1 vs. NCBI nr
Match: gi|401662379|emb|CCC14990.1| (Myb transcription factor [Humulus lupulus]) HSP 1 Score: 353.6 bits (906), Expect = 3.200e-94 Identity = 181/285 (63.51%), Postives = 215/285 (75.44%), Query Frame = 1
BLAST of Spo13499.1 vs. NCBI nr
Match: gi|255579979|ref|XP_002530824.1| (PREDICTED: myb-related protein 308 [Ricinus communis]) HSP 1 Score: 349.4 bits (895), Expect = 6.000e-93 Identity = 190/282 (67.38%), Postives = 217/282 (76.95%), Query Frame = 1
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_050510 PE=4 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 3.600e-161 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN74_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214180 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.000e-115 Identity = 220/294 (74.83%), Postives = 245/294 (83.33%), Query Frame = 1
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Match: A2Q124_HUMLU (Putative transcription factor OS=Humulus lupulus GN=HlMYB1 PE=2 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 7.600e-95 Identity = 181/285 (63.51%), Postives = 217/285 (76.14%), Query Frame = 1
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Match: J7PPZ4_HUMLU (Myb transcription factor OS=Humulus lupulus GN=HlMyb7 PE=2 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 2.200e-94 Identity = 181/285 (63.51%), Postives = 215/285 (75.44%), Query Frame = 1
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Match: B9SXV5_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0491270 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 4.200e-93 Identity = 190/282 (67.38%), Postives = 217/282 (76.95%), Query Frame = 1
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 9.200e-86 Identity = 166/255 (65.10%), Postives = 187/255 (73.33%), Query Frame = 1
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.500e-85 Identity = 180/296 (60.81%), Postives = 206/296 (69.59%), Query Frame = 1
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Match: MYB38_MAIZE (Myb-related protein Zm38 OS=Zea mays PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 3.800e-79 Identity = 162/298 (54.36%), Postives = 187/298 (62.75%), Query Frame = 1
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 8.400e-79 Identity = 164/289 (56.75%), Postives = 192/289 (66.44%), Query Frame = 1
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 9.300e-78 Identity = 156/292 (53.42%), Postives = 198/292 (67.81%), Query Frame = 1
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Match: AT4G38620.1 (myb domain protein 4) HSP 1 Score: 316.2 bits (809), Expect = 2.000e-86 Identity = 180/296 (60.81%), Postives = 206/296 (69.59%), Query Frame = 1
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Match: AT4G34990.1 (myb domain protein 32) HSP 1 Score: 291.6 bits (745), Expect = 5.200e-79 Identity = 156/292 (53.42%), Postives = 198/292 (67.81%), Query Frame = 1
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Match: AT2G16720.1 (myb domain protein 7) HSP 1 Score: 288.5 bits (737), Expect = 4.400e-78 Identity = 160/285 (56.14%), Postives = 192/285 (67.37%), Query Frame = 1
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Match: AT1G22640.1 (myb domain protein 3) HSP 1 Score: 265.0 bits (676), Expect = 5.200e-71 Identity = 146/265 (55.09%), Postives = 171/265 (64.53%), Query Frame = 1
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Match: AT4G09460.1 (myb domain protein 6) HSP 1 Score: 259.2 bits (661), Expect = 2.900e-69 Identity = 123/168 (73.21%), Postives = 136/168 (80.95%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13499.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13499.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13499.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13499.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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