Spo13575 (gene) | SpinachBase

Overview


Name	Spo13575
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Chlororespiratory reduction 3) (Expressed protein)
Location	chr4 : 84069855 .. 84070514 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTATCAGGCTGTTTTTCCATAACCAAACCTGTCATCACTCTTGCTTCTCTCTCCAACAACTCTTCTAACCCCACAACACCCCGGAAACGTTCAAAGATTACTCCTCCAAAACCAAACCACATTCCGCAAATTCAGCCCTCTGTCGCGGAGATTGAAAGAGCCATTGGTGCTGGCATTTACCGCGATTATGATCCTGCCAGTATCAGGCAAGCACCCCCATACCTCATTTATCCCTTTCAGCCTCTTATTATTTTGGAATAATGAATAAGTTTTTGGTTATCCCAAGAAAATTAGAACTTGAGGTTATTCAAATTCAATTTTTGTAACTGTTTTAAGTATCTGTTAATACTCATCTTTGTTATAACTTGATATATGCAATGCAAATGCAGTGAGCCAAAGGAGAAGAATAGCGTGTTTGATGCGGTACTGTCAAATTCAATAGGAAAGAAAGAGGGGAAAACAGAAAAGGCACTCCGCGAAACTGGAGAGTGGTTAAATGGACAGACTGAGAAAGTTGCTCAATCTTCAGGAAAGAAAATTCTAGAGGTTATGTTGTTTTGGATTGCACCAGCTTGGTTCCTCTTGCTTTTGGTTGCTACTGGTGCTGTTAAGTTACCTTTTCCCTCTTCTATCCTTGATGACTTAATCATGTAA

mRNA sequence

ATGGTTTTATCAGGCTGTTTTTCCATAACCAAACCTGTCATCACTCTTGCTTCTCTCTCCAACAACTCTTCTAACCCCACAACACCCCGGAAACGTTCAAAGATTACTCCTCCAAAACCAAACCACATTCCGCAAATTCAGCCCTCTGTCGCGGAGATTGAAAGAGCCATTGGTGCTGGCATTTACCGCGATTATGATCCTGCCAGTATCAGTGAGCCAAAGGAGAAGAATAGCGTGTTTGATGCGGTACTGTCAAATTCAATAGGAAAGAAAGAGGGGAAAACAGAAAAGGCACTCCGCGAAACTGGAGAGTGGTTAAATGGACAGACTGAGAAAGTTGCTCAATCTTCAGGAAAGAAAATTCTAGAGGTTATGTTGTTTTGGATTGCACCAGCTTGGTTCCTCTTGCTTTTGGTTGCTACTGGTGCTGTTAAGTTACCTTTTCCCTCTTCTATCCTTGATGACTTAATCATGTAA

Coding sequence (CDS)

ATGGTTTTATCAGGCTGTTTTTCCATAACCAAACCTGTCATCACTCTTGCTTCTCTCTCCAACAACTCTTCTAACCCCACAACACCCCGGAAACGTTCAAAGATTACTCCTCCAAAACCAAACCACATTCCGCAAATTCAGCCCTCTGTCGCGGAGATTGAAAGAGCCATTGGTGCTGGCATTTACCGCGATTATGATCCTGCCAGTATCAGTGAGCCAAAGGAGAAGAATAGCGTGTTTGATGCGGTACTGTCAAATTCAATAGGAAAGAAAGAGGGGAAAACAGAAAAGGCACTCCGCGAAACTGGAGAGTGGTTAAATGGACAGACTGAGAAAGTTGCTCAATCTTCAGGAAAGAAAATTCTAGAGGTTATGTTGTTTTGGATTGCACCAGCTTGGTTCCTCTTGCTTTTGGTTGCTACTGGTGCTGTTAAGTTACCTTTTCCCTCTTCTATCCTTGATGACTTAATCATGTAA

Protein sequence

MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAGIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKKILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13575.1	Spo13575.1	mRNA

Homology

[Close]

BLAST of Spo13575.1 vs. NCBI nr
Match: gi|902209841|gb|KNA16287.1| (hypothetical protein SOVF_090080 [Spinacia oleracea])

HSP 1 Score: 304.7 bits (779), Expect = 9.500e-80
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


		  
Query: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60
           MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG
Sbjct: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60

Query: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120
           IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK
Sbjct: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120

Query: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM
Sbjct: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 158

[Close]

BLAST of Spo13575.1 vs. NCBI nr
Match: gi|731313433|ref|XP_010680239.1| (PREDICTED: uncharacterized protein LOC104895430 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 236.1 bits (601), Expect = 4.200e-59
Identity = 124/158 (78.48%), Postives = 135/158 (85.44%), Query Frame = 1


		  
Query: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60
           MVL GC  +TKPVITLASLS+NSS PT PRK SK+T  KPN   Q QPSVAEIERAIGAG
Sbjct: 1   MVLLGCIFVTKPVITLASLSSNSSQPTAPRKPSKVTTSKPNLNKQNQPSVAEIERAIGAG 60

Query: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120
            YRDYDPASISEP EK +VFDAVLSNSIGK EGKTE+ALRETGEW++GQTE  A+SSGKK
Sbjct: 61  SYRDYDPASISEPAEKKNVFDAVLSNSIGKTEGKTERALRETGEWISGQTEGAARSSGKK 120

Query: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           ILEVM FW+APAWF+LLL+ATGAVKLPF    LDDLIM
Sbjct: 121 ILEVMFFWLAPAWFVLLLIATGAVKLPFSFPALDDLIM 158

[Close]

BLAST of Spo13575.1 vs. NCBI nr
Match: gi|731369440|ref|XP_002284679.2| (PREDICTED: uncharacterized protein LOC100250842 [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 4.200e-27
Identity = 80/159 (50.31%), Postives = 103/159 (64.78%), Query Frame = 1


		  
Query: 6   CFSITKPVITLASLSNNSSNPTTPRKRSKITP------PKPNHIPQIQPSVAEIERAIGA 65
           C S++ P I LASL+++S  P    KR + T       P+P   PQ QPSV +IERAIGA
Sbjct: 40  CVSMSTP-IALASLNHHSQPPLPQPKRIEPTTLPKTKRPQP---PQRQPSVIQIERAIGA 99

Query: 66  GIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGK 125
           GI+RD DP    + K   ++FD +LSNSIGK EG  EK LRETGEW+  + E  ++S+ K
Sbjct: 100 GIFRDRDPRGSDQNK---TLFDLLLSNSIGKTEGSVEKKLRETGEWIIDRAEGTSRSAAK 159

Query: 126 KILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           +IL V   W+ P W LLLLVA+G +KLPF    LD+LIM
Sbjct: 160 QILMVTFLWVLPTWTLLLLVASGVLKLPFSIPFLDNLIM 191

[Close]

BLAST of Spo13575.1 vs. NCBI nr
Match: gi|719962163|ref|XP_010265436.1| (PREDICTED: uncharacterized protein LOC104603148 [Nelumbo nucifera])

HSP 1 Score: 128.6 bits (322), Expect = 9.400e-27
Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 1


		  
Query: 4   SGCFSITKPVITL-----ASLSNNSSNPTTP-----RKRSKITPPKPNHIPQIQPSVAEI 63
           SGCFS+    +T      ASL +N++ P  P     R+R++  P  P    Q QPSVAE+
Sbjct: 9   SGCFSVIATGVTTRGFLTASLHDNATPPPLPPLRNNRRRTRNAPVTPPPKQQQQPSVAEV 68

Query: 64  ERAIGAGIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKV 123
           ERAIGAGI+RD DP    E   ++++FD ++S+ +G+ EG  E+ LRETGEW+   TE  
Sbjct: 69  ERAIGAGIFRDRDPRGSGE---RSTLFDMLVSSPLGQPEGSIERKLRETGEWVIDTTEGA 128

Query: 124 AQSSGKKILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           ++S+G++IL V+   + P W LLLLVA+G +KLPF +  LDDL+M
Sbjct: 129 SRSAGQRILLVVCLGVLPVWVLLLLVASGVIKLPFSAPFLDDLLM 170

[Close]

BLAST of Spo13575.1 vs. NCBI nr
Match: gi|698526967|ref|XP_009760329.1| (PREDICTED: uncharacterized protein LOC104212684 [Nicotiana sylvestris])

HSP 1 Score: 123.6 bits (309), Expect = 3.000e-25
Identity = 76/157 (48.41%), Postives = 98/157 (62.42%), Query Frame = 1


		  
Query: 2   VLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAGI 61
           +L+     T P   L S SNN  NP   + + ++   K     Q Q SVAEIERAIGAGI
Sbjct: 15  ILASSSPPTDPSPFLPSPSNNL-NPPLHKSQPRLELQKKKKQNQRQLSVAEIERAIGAGI 74

Query: 62  YRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKKI 121
           +RD D +   E KE  ++FD++LSNS+G+ EG  EK LRETGEWL  +TE  + S+GKKI
Sbjct: 75  FRDRDTSR--EAKESKTLFDSILSNSVGENEGDMEKKLRETGEWLIDKTEDTSASAGKKI 134

Query: 122 LEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           L V+  WI P W L  LVA+G V  PF +  LDDL++
Sbjct: 135 LVVVFKWILPLWILAFLVASGMVNPPFSTPFLDDLLL 168

[Close]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBX1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_090080 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.600e-80
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


		  
Query: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60
           MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG
Sbjct: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60

Query: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120
           IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK
Sbjct: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120

Query: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM
Sbjct: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 158

[Close]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D591_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011040 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.900e-59
Identity = 124/158 (78.48%), Postives = 135/158 (85.44%), Query Frame = 1


		  
Query: 1   MVLSGCFSITKPVITLASLSNNSSNPTTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAG 60
           MVL GC  +TKPVITLASLS+NSS PT PRK SK+T  KPN   Q QPSVAEIERAIGAG
Sbjct: 1   MVLLGCIFVTKPVITLASLSSNSSQPTAPRKPSKVTTSKPNLNKQNQPSVAEIERAIGAG 60

Query: 61  IYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKK 120
            YRDYDPASISEP EK +VFDAVLSNSIGK EGKTE+ALRETGEW++GQTE  A+SSGKK
Sbjct: 61  SYRDYDPASISEPAEKKNVFDAVLSNSIGKTEGKTERALRETGEWISGQTEGAARSSGKK 120

Query: 121 ILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           ILEVM FW+APAWF+LLL+ATGAVKLPF    LDDLIM
Sbjct: 121 ILEVMFFWLAPAWFVLLLIATGAVKLPFSFPALDDLIM 158

[Close]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Match: F6HFG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05310 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.900e-27
Identity = 80/159 (50.31%), Postives = 103/159 (64.78%), Query Frame = 1


		  
Query: 6   CFSITKPVITLASLSNNSSNPTTPRKRSKITP------PKPNHIPQIQPSVAEIERAIGA 65
           C S++ P I LASL+++S  P    KR + T       P+P   PQ QPSV +IERAIGA
Sbjct: 40  CVSMSTP-IALASLNHHSQPPLPQPKRIEPTTLPKTKRPQP---PQRQPSVIQIERAIGA 99

Query: 66  GIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGK 125
           GI+RD DP    + K   ++FD +LSNSIGK EG  EK LRETGEW+  + E  ++S+ K
Sbjct: 100 GIFRDRDPRGSDQNK---TLFDLLLSNSIGKTEGSVEKKLRETGEWIIDRAEGTSRSAAK 159

Query: 126 KILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
           +IL V   W+ P W LLLLVA+G +KLPF    LD+LIM
Sbjct: 160 QILMVTFLWVLPTWTLLLLVASGVLKLPFSIPFLDNLIM 191

[Close]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Match: A0A022Q1W0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014836mg PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.000e-25
Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 1


		  
Query: 20  SNNSSNPTTPRK-----RSKITPPKPNHIPQIQPSVAEIERAIGAGIYRDYDPASISEPK 79
           +NN++N   P+      +SK+  PK     Q  PSV EIERAIGAGI+RD D     + +
Sbjct: 37  NNNNNNNKLPKTNYVKLQSKLKQPKQ----QQPPSVLEIERAIGAGIFRDRDNYGEEKEE 96

Query: 80  EKNSVFDAVLSNSIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKKILEVMLFWIAPAWF 139
            K S+FD +LSNS+GK EG  EK LRETGEWL  QTE   +S+GK+IL  M  W+ P W 
Sbjct: 97  TKTSLFDNLLSNSVGKSEGSVEKQLRETGEWLVYQTENTTRSAGKQILVSMFVWVIPMWI 156

Query: 140 LLLLVATGAVKLPFPSSILDDLIM 159
              LVATG + LPF +  L DL +
Sbjct: 157 FSFLVATGVIPLPFDAPFLKDLFL 176

[Close]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GZG3_9ROSI (Chlororespiratory reduction 3 (Fragment) OS=Melianthus villosus GN=CRR3 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.000e-24
Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 1


		  
Query: 27  TTPRKRSKITPPKPNHIPQIQPSVAEIERAIGAGIYRDYDPASISEPKEKNSVFDAVLSN 86
           T P K+ K    K N  PQ QP++ +IERAIGAG++RD D   +   +EK SVF+ +L +
Sbjct: 25  TLPMKKRK----KQNQQPQ-QPTIIQIERAIGAGVFRDSDSRDL---EEKTSVFNGLLPD 84

Query: 87  SIGKKEGKTEKALRETGEWLNGQTEKVAQSSGKKILEVMLFWIAPAWFLLLLVATGAVKL 146
           S  K EG  EK LRE GEWL  QTE+ + S+GK IL V+  WI P W   LLVATGA+KL
Sbjct: 85  SSNKFEGSVEKKLREIGEWLADQTERNSSSTGKGILMVIFQWILPIWVFSLLVATGAIKL 144

Query: 147 PFPSSILDDLIM 159
           PF S+ LD+LIM
Sbjct: 145 PFNSAFLDELIM 148

[Close]

BLAST of Spo13575.1 vs. ExPASy Swiss-Prot
Match: CRR3_ARATH (Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Arabidopsis thaliana GN=CRR3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.300e-20
Identity = 72/177 (40.68%), Postives = 95/177 (53.67%), Query Frame = 1


		  
Query: 2   VLSGCFSITKPVI-TLASLSNNSSNPTTPRKRSKITPP-----KPNHIPQI--------- 61
           VLS  +SIT+    T+ASL+N+S +P      SK+  P     KP  + Q+         
Sbjct: 3   VLSTIYSITRASTPTMASLTNDSPSPLPSSSPSKLPSPTSPSKKPLKLRQVSKQMGSQNQ 62

Query: 62  -----QPSVAEIERAIGAGIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRE 121
                +PS+A+IERA G+G YRD +        + N+VFD +L     K E K EK LRE
Sbjct: 63  QRRGNKPSIAQIERAFGSGSYRDSEGEM-----DMNTVFDELLLGHANKFESKIEKKLRE 122

Query: 122 TGEWLNGQTEKVAQSSGKKILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
            GE    +TE   +SSGK +L   + WI P W + LLVA G +KLPF    LDDLIM
Sbjct: 123 IGEIFVARTEPKLRSSGKPVLMFTIQWILPIWIMSLLVACGVIKLPFSIPFLDDLIM 174

[Close]

BLAST of Spo13575.1 vs. TAIR (Arabidopsis)
Match: AT2G01590.1 (chlororespiratory reduction 3)

HSP 1 Score: 100.9 bits (250), Expect = 7.400e-22
Identity = 72/177 (40.68%), Postives = 95/177 (53.67%), Query Frame = 1


		  
Query: 2   VLSGCFSITKPVI-TLASLSNNSSNPTTPRKRSKITPP-----KPNHIPQI--------- 61
           VLS  +SIT+    T+ASL+N+S +P      SK+  P     KP  + Q+         
Sbjct: 3   VLSTIYSITRASTPTMASLTNDSPSPLPSSSPSKLPSPTSPSKKPLKLRQVSKQMGSQNQ 62

Query: 62  -----QPSVAEIERAIGAGIYRDYDPASISEPKEKNSVFDAVLSNSIGKKEGKTEKALRE 121
                +PS+A+IERA G+G YRD +        + N+VFD +L     K E K EK LRE
Sbjct: 63  QRRGNKPSIAQIERAFGSGSYRDSEGEM-----DMNTVFDELLLGHANKFESKIEKKLRE 122

Query: 122 TGEWLNGQTEKVAQSSGKKILEVMLFWIAPAWFLLLLVATGAVKLPFPSSILDDLIM 159
            GE    +TE   +SSGK +L   + WI P W + LLVA G +KLPF    LDDLIM
Sbjct: 123 IGEIFVARTEPKLRSSGKPVLMFTIQWILPIWIMSLLVACGVIKLPFSIPFLDDLIM 174

The following BLAST results are available for this feature:

BLAST of Spo13575.1 vs. NCBI nr
BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
BLAST of Spo13575.1 vs. ExPASy Swiss-Prot
BLAST of Spo13575.1 vs. TAIR (Arabidopsis)

BLAST of Spo13575.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902209841\|gb\|KNA16287.1\|	9.5e-80	100.	hypothetical protein SOVF_0900...	[more]
gi\|731313433\|ref\|XP_010680239.1\|	4.2e-59	78.4	PREDICTED: uncharacterized pro...	[more]
gi\|731369440\|ref\|XP_002284679.2\|	4.2e-27	50.3	PREDICTED: uncharacterized pro...	[more]
gi\|719962163\|ref\|XP_010265436.1\|	9.4e-27	45.4	PREDICTED: uncharacterized pro...	[more]
gi\|698526967\|ref\|XP_009760329.1\|	3.0e-25	48.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13575.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RBX1_SPIOL	6.6e-80	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D591_BETVU	2.9e-59	78.4	Uncharacterized protein OS=Bet...	[more]
F6HFG0_VITVI	2.9e-27	50.3	Putative uncharacterized prote...	[more]
A0A022Q1W0_ERYGU	8.0e-25	48.6	Uncharacterized protein OS=Ery...	[more]
A0A0F7GZG3_9ROSI	3.0e-24	53.0	Chlororespiratory reduction 3 ...	[more]

BLAST of Spo13575.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
CRR3_ARATH	1.3e-20	40.6	Probable NAD(P)H dehydrogenase...	[more]

BLAST of Spo13575.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G01590.1	7.4e-22	40.6	chlororespiratory reduction 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36340	FAMILY NOT NAMED	coord: 13..158 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0030091	protein repair
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0009657	plastid organization
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0044255	cellular lipid metabolic process
biological_process	GO:0008610	lipid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0032259	methylation
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009536	plastid
cellular_component	GO:0010007	magnesium chelatase complex
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0016851	magnesium chelatase activity
molecular_function	GO:0046422	violaxanthin de-epoxidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15389	0.78	Barchart \| Table
Spo18000	0.77	Barchart \| Table
Spo23249	0.74	Barchart \| Table
Spo25817	0.74	Barchart \| Table
Spo19288	0.73	Barchart \| Table
Spo13451	0.72	Barchart \| Table
Spo00214	0.71	Barchart \| Table
Spo07915	0.70	Barchart \| Table
Spo12875	0.70	Barchart \| Table
Spo09384	0.70	Barchart \| Table
Spo26975	0.69	Barchart \| Table
Spo06885	0.69	Barchart \| Table
Spo17668	0.68	Barchart \| Table
Spo25783	0.68	Barchart \| Table
Spo12965	0.67	Barchart \| Table
Spo04377	0.67	Barchart \| Table
Spo23352	0.66	Barchart \| Table
Spo12682	0.66	Barchart \| Table
Spo09769	0.65	Barchart \| Table
Spo03343	0.65	Barchart \| Table
Spo03903	0.65	Barchart \| Table
Spo11688	0.65	Barchart \| Table