Spo13579 (gene) | SpinachBase

Overview


Name	Spo13579
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA-binding protein RZ-1
Location	chr4 : 84007262 .. 84012603 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCGGATTCAGATCCAGCAATTCATGGCCGGTCACGGATCGGGTACTATAGTCCTATAGTAGTTGAACCGGTTTTGGATTCAGATCCAGCAATTCATGTCGGGTTATGGAATTGGTTAGTCCGGTACCCACCTATTTTGCTCACCCCAAAATGTTAATATGCCCTTTGACACTTTCACAAAGCATATCCCTCGTTCAGCTTTCTGTTTTGCTGAGCGACAGTCTGGCTAATTAGGGTTTATCGCGAACTCATCTGCCGAAGGTTCTTCCCTCCCTATCCTTCGTATTTCGCAATCTATCTGTTATTGTCGGTGGATCACTATCAGATCTGTATTCTTATCATCATTTACTATCGATTTGTCATTTCTTGGCTGATTTTAATTTCATTGCTGCGAGGTCAGATCTATGTTGAAACTGCTAGCTTTTTATTGATTAATTGTTTGATTTTGTTTTTCGCTCTAGGTACCTTAGTATGTTTCATGAATTGCTCTTCTATTGTTTTCAATTGAATGGATGAATTTGTTTCGGAAACCTAATTTTCGATCTCATTTGATTAGTTGAAGTTTCTGTCTTTACTTTTGATAGATTCGTGATTCACTATTTTGATTCTATCATTGTTTGTGGGATAACAACGTAAAATGATGTTGTTCATGTGATTTGTTTTTGTGGATGGGTTGATGCTAAGTGCTTGTGAGGGGTTGATTTTCTGATTAGAGTATTAGTGTTGGACTTTGTTCTCAAAGCTGATTGATTTGCGGTATGTCTTAGTAACTGGTTGTTTAGGGAAGGGGTGGGAGTGGGACGGGAGAGGAATAAAGAATATCCATTTTTCGCAACCGTATTACACATTTGTGGGAGGGCATCGCAGGTCCTTAGAGTATTAGTTTCTGGGCTTCCTTATCGGAGCCAATTGACTTGCGGTAGGTCTTTGTAACTGATTATGTAGGAAGAATGCCTGGGGGAGGGAAGAATGCCCATTTTTTCATCACTGTGATTATAGTTTTGTTGGAGCGTATTGCAGGTCCTTAGTTAAGTCTTGGCCAATTGTTAATCTTAATGATCTGAGCCAGAAGAAATTGGTTCTGAGGGTTGGGAATATATATATATATATATATATATAAAGAGAGAGAGAGAAAGACAGAGCTGTAATTTATAGGGTTTTTTTATGTTGTCACAAAGGTTCAATTGGTTAGCAGTTATCTATCTTTAAAGAGAACATTTCTTGTTAATTTACCGATTATTGTAAATTTTATTAGATTTTTTTTAATGTTTCCACTAGAGCCTCAAATTGGTTTGTGGTCATCTTTATCTATCATTAAAGAAATCATTTTGTGTTTCAACATTTTAGTACTGTACTAGTATTCTACTGGTCTGATTACCAATGGGCCATGTACAATTATTACAGTGCGTTCGTCTTCCTGTTAGGTGGTTGTTTATAAGCACAATTTGGTGTACTTCCCTGGTCTTGTGCATGATTTTGACTTTTAGATACAGTATATTTTTTTTTGTTTTTGTTGTTTTCATGTACCTAATTCTGCTGTTATTTTGAGTTTCTTCATCTGTTTAATTGGATGTGGAAATATTGTTTGCCTATTTTGTAGGTAAAATCATGGGAGACGTGGATGAATTTCGCTGTTTCGTGGGTAGCCTTTCATGGTCTACTACTGATAGAGGTCTGAGAGATGCATTTGAAAAGTATGGTCGTCTACTTGAAGCCAAAGTAAGTTTTGTTTGTACCCTAGTTATGCTACAGTTGAAAAGTTACTTTTTCATAGATCTTTGATTGTTGATGGAAGTCATGTTAGTATGGGTTCCTTGTGGTAGGGAGCAAATAAAATTCTGTCAGGCACTCGGGCTTATCCTCACATGTAATTTGGGTATGCATCATGTCTATACCATTAAATTCACGGGCAGTGTAATTTTTTCTTCAGAACTCCCGGCACTTGTTTTAGTGGATTTCATCTCTATCTGAGTGGGTGAAAAAGGATTAGGAATTAATTTCCTTTTCTTGTGTATGGACTCATTGTTCGGTAGACTTATTGCCTACTTAAGAAAATTTGAGAATCGTATCTTCATAATCTTTAATTTTCCAAGTGGAATTGTTCATTTAGTTACGATAGTACTTTGATTGAAATTTAGCGTCTATTATTTGAATGTGAACGGTTATTTCAAGAACTATGTTTATTCTTTTTTTTTTCCTGACTATTGAGTTCTACCGTTCCTGACTATTGAGTTATACCGTGAACACAGGTTGTGTTGGACAAATTTTCTGGGCGTTCTCGTGGATTTGGTTTTGTTTCTTTTGATGACAAGAGAGCTATGGAAGAAGCTATTGAGGAAATGAATGGTGTTGACCTAGATGGCCGTCCTATCACTGTGGAAAGGGCTCAACCTACCCAAGGCTCTTCTAGGGACCGAGATGACGACCGTGACCGTGACCGTGGTCGTGATCGCGGCGACCGTGACCGCGGTCGTGATCGTGGTTTTGGAGGTTCAAGGGGATCTGGTGGGGGTGGTGACTGTTTTAAATGTGGTAAGCCCGGACATTTTGCTCGTGAATGTCCATCTGATGATGGAGGTAGGGGTGGTGGTAGGTATGGAGGAAGAGGTGAAAGAAAAGGTGGTAGCTATGGACCTGACCGCGGCGGTGATCGCGGCGGTGACCGTGGTGGGGATCGCTATAGTGGCGGAGGGGGAGGTGGAGGTGGACGTTACAGAGATTCTGGTAGCCGTGGAGGAGGATATGGAAGTGATAGGTACAGCCGCGACCGTTCTGGCCCATATGACCGCGCAGGATCTGGGGGCTACCGCTAAGGGTTTGAATGGTATGTAACATTCTTTCTGCTTGTGGTTTGTCATTTACTTTTAACCTACACTAACCACATTACCATTTCAATTTCAGCTGTGAAGATGATGTTTGTTCTACAGGATAATCTTCACGAAGAGAGGGAGCTTTTTTTTACTGTGTTGTACTTAGTGGAAGACATCTTATGTGGTTTCAGACTTGGAATGCGTAATTAGAGTTGAACTACTTTCTGTTTCTACACCAGGAAATCCATTTGTCCCGCTGTGGGAGTATTTTCTGTTTCAGGAGCTCACTGATGTTATGATGCGATCTTATGCTTGCTTAATGGGGACATCTGATTTGGCTCTTTAGATATATGAATCTTGTTTTCGCTGCCATACCTGGTTGATTTACATGCACGTGCATTGCTCTTTCTTCGCTGCCATTTGGTTTTGGTGTGGGTTAGTTGGACGTATAACTGGTTGTGCGCACCATGTTCCTGAGTATATATCATTCGGTTGTTATGAGCTGTGTACGTGTCTGTGGAAGTTCCAAGATGTTTTGTTCTTGTGGCATTGTCCTTTGATCTTTCCTAGTGCCTAATGCGCATTTTAAAACGAATTTTGGAAATGAGAACTGGGTAATTTCTTATCCTAATTTGATGTTTGTTTTACTTGGATGTTTTATGATATTAATTGTTTTGTGGTTTTGGCAGGCTTTATTGGCCTTTTGTGCTCCTTTTTTGGTACATGGTTCGGTTCCGTTGTTGCTAATGTTGTTCCACTGTGTCTTGGTAATAAGTTATGAAAAATGTGAGGTCTTTGGGGTTTTATCAGCAAGATGAATATGAGTGGTGCAGTGAGAAGTGCAGGGTGTTCCTTTTGTAATCTGCTGTTGTCTTGCAATGTTACGGTCAATGGAAATTTTGGTCGTTTCTTGTTCCGTGGTCTTAAAGGCTGTTCAATTCACAGACAATTGTGGCTCTATTAAGGTCATGTGTATACAACTTGCCCGTACATGTTTGTTTGTCAACAAAGTCCTGACCAGTGGGGTAGTTCTTGCAGTTTGGTCCTTGTCCCTGTTTTGAGTTCCTATTAGGCTCGAGAGACTTGATACAGAGAATCACAAATGGCCCTGGGAATCAATCTGCATGATCATTTGGGGAGTGAGCTACTTCTGTTCCTGTTAATTGGGAATGCAACTATTGATTTCAGTCGCAGAAGCAAAGAAAGGTGTTTAGTGTCTACGGACGAATTAGATGATGCTTCTCACTTACTCAGTTATAGAGTGTAGGCACATGCTATATAGAGTGAATGGTATGCCTATATTTGATGTTGCATTTTCTGAGAATTTTAAGTGTTTTTTGGACTGCCCCCTTCGCATGATATTAAAAGAAAAAGTTCTGATGATGTTTGCTAACTGCATATCCATGTGTGTTTATTATCTGTGCTGGCCCTCATATCTTCAAGTATTTTATTCCAATTTGATTGGTGCATGAAGAACACAGATTACCATTTTTATGTTCTCCAGATCATAATGTTTGTTCAAGCTTACTCTTTAGGTAGTTGTAAATGTATGGTTTTGCGTTCATTCTCATGCTGAATTCAAGATTTTCTATTATTTGCCACAGTGCATTTTATTGATGTTAACGACATCGACTCTGAATGTGATGCAAAATTGCTTGAACTGATGTAATTGTAATTGTGTGTACCAAATAATATACGAAGTATGTAAACCTGGAATCAATGTAGATGCATTGCTTGTCGTGAGTAAGATTTGCAAGAGTATGTTAGTCTTTTGTTTTCTGAGGTAGTGCGATAGTTCCATGCATTTATGTTGTACTCCCATAAAACATTGTTCTACAAATGTTTACTTCCATCTTTTTCTGGGCAGCCTTTGAATTTTTTTTTTTTGTTTCCTCGCATACCATCCGAGTAAAAGATTCTTTCTGATTGATTTTTTAAGGTGATTTGAGAAGTTTTGATTTCCTGGGGCTGGTGGGATTGATGATGTGTTATTCTTGAATGTCATTTGTTGGGGGCATTAGTTCCCATTCTGAAAGCATGGTGGGTGTATTTCTTTCCTCTAGAGAGGGTATTATAGGAATTAAAGTAGTTGCATTGCGCATCTATTAGATTATTTGGCAGGATACTGAATTGTGTGGAGATCACTAACGAGGTTCACTAGATGAAGAGGAAATGTTACAATGGAGCTGATATTTTTTGGTCTTCTGCTTCTGTTCTCTATCATGGCAATCACAAAGACTTGGCGGGTCCGTAGCGGGTTGGTTAAGTGAGTTTTGGCCAGGCCTTGTTATCTTTGATCACTGAGATTCGCTGAGACGTGAGAGTACTCATGAGAAACAAACTCATTATTATCCCTTATCACAGTATGTTGTACAGATAATTAGTTTATTGAATCAATACTAGGGAGCCTATAACATCAATCTTTTCTGTTTATTTCTGGCAAAAAATGGTTCCTGTTTATTTGTAGGGAAAAAATGGTTATAAGCTTGTTGAATTTTCCATACCTATAAGAAAGCTTATTGATTTT

mRNA sequence

ATGGGTTCGGATTCAGATCCAGCAATTCATGGCCGGTCACGGATCGGGTACTATAGTCCTATAGTAGTTGAACCGGTTTTGGATTCAGATCCAGCAATTCATGTCGGGTTATGGAATTGGTTAGTCCGGTACCCACCTATTTTGCTCACCCCAAAATGGTTTATCGCGAACTCATCTGCCGAAGGTAAAATCATGGGAGACGTGGATGAATTTCGCTGTTTCGTGGGTAGCCTTTCATGGTCTACTACTGATAGAGGTCTGAGAGATGCATTTGAAAAGTATGGTCGTCTACTTGAAGCCAAAGTTGTGTTGGACAAATTTTCTGGGCGTTCTCGTGGATTTGGTTTTGTTTCTTTTGATGACAAGAGAGCTATGGAAGAAGCTATTGAGGAAATGAATGGTGTTGACCTAGATGGCCGTCCTATCACTGTGGAAAGGGCTCAACCTACCCAAGGCTCTTCTAGGGACCGAGATGACGACCGTGACCGTGACCGTGGTCGTGATCGCGGCGACCGTGACCGCGGTCGTGATCGTGGTTTTGGAGGTTCAAGGGGATCTGGTGGGGGTGGTGACTGTTTTAAATGTGGTAAGCCCGGACATTTTGCTCGTGAATGTCCATCTGATGATGGAGGTAGGGGTGGTGGTAGGTATGGAGGAAGAGGTGAAAGAAAAGGTGGTAGCTATGGACCTGACCGCGGCGGTGATCGCGGCGGTGACCGTGGTGGGGATCGCTATAGTGGCGGAGGGGGAGGTGGAGGTGGACGTTACAGAGATTCTGGTAGCCGTGGAGGAGGATATGGAAGTGATAGGTACAGCCGCGACCGTTCTGGCCCATATGACCGCGCAGGATCTGGGGGCTACCGCTAAGGGTTTGAATGCTGTGAAGATGATGTTTGTTCTACAGGATAATCTTCACGAAGAGAGGGAGCTTTTTTTTACTGTGTTGTACTTAGTGGAAGACATCTTATGTGGTTTCAGACTTGGAATGCGTAATTAGAGTTGAACTACTTTCTGTTTCTACACCAGGAAATCCATTTGTCCCGCTGTGGGAGTATTTTCTGTTTCAGGAGCTCACTGATGTTATGATGCGATCTTATGCTTGCTTAATGGGGACATCTGATTTGGCTCTTTAGATATATGAATCTTGTTTTCGCTGCCATACCTGGTTGATTTACATGCACGTGCATTGCTCTTTCTTCGCTGCCATTTGGTTTTGGTGTGGGTTAGTTGGACGTATAACTGGTTGTGCGCACCATGTTCCTGAGTATATATCATTCGGTTGTTATGAGCTGTGTACGTGTCTGTGGAAGTTCCAAGATGTTTTGTTCTTGTGGCATTGTCCTTTGATCTTTCCTAGTGCCTAATGCGCATTTTAAAACGAATTTTGGAAATGAGAACTGGGTAATTTCTTATCCTAATTTGATGTTTGTTTTACTTGGATGTTTTATGATATTAATTGTTTTGTGGTTTTGGCAGGCTTTATTGGCCTTTTGTGCTCCTTTTTTGGTACATGGTTCGGTTCCGTTGTTGCTAATGTTGTTCCACTGTGTCTTGGTAATAAGTTATGAAAAATGTGAGGTCTTTGGGGTTTTATCAGCAAGATGAATATGAGTGGTGCAGTGAGAAGTGCAGGGTGTTCCTTTTGTAATCTGCTGTTGTCTTGCAATGTTACGGTCAATGGAAATTTTGGTCGTTTCTTGTTCCGTGGTCTTAAAGGCTGTTCAATTCACAGACAATTGTGGCTCTATTAAGGTCATGTGTATACAACTTGCCCGTACATGTTTGTTTGTCAACAAAGTCCTGACCAGTGGGGTAGTTCTTGCAGTTTGGTCCTTGTCCCTGTTTTGAGTTCCTATTAGGCTCGAGAGACTTGATACAGAGAATCACAAATGGCCCTGGGAATCAATCTGCATGATCATTTGGGGAGTGAGCTACTTCTGTTCCTGTTAATTGGGAATGCAACTATTGATTTCAGTCGCAGAAGCAAAGAAAGGTGTTTAGTGTCTACGGACGAATTAGATGATGCTTCTCACTTACTCAGTTATAGAGTGTAGGCACATGCTATATAGAGTGAATGGTGATTTGAGAAGTTTTGATTTCCTGGGGCTGGTGGGATTGATGATGTGTTATTCTTGAATGTCATTTGTTGGGGGCATTAGTTCCCATTCTGAAAGCATGGTGGGTGTATTTCTTTCCTCTAGAGAGGGTATTATAGGAATTAAAGTAGTTGCATTGCGCATCTATTAGATTATTTGGCAGGATACTGAATTGTGTGGAGATCACTAACGAGGTTCACTAGATGAAGAGGAAATGTTACAATGGAGCTGATATTTTTTGGTCTTCTGCTTCTGTTCTCTATCATGGCAATCACAAAGACTTGGCGGGTCCGTAGCGGGTTGGTTAAGTGAGTTTTGGCCAGGCCTTGTTATCTTTGATCACTGAGATTCGCTGAGACGTGAGAGTACTCATGAGAAACAAACTCATTATTATCCCTTATCACAGTATGTTGTACAGATAATTAGTTTATTGAATCAATACTAGGGAGCCTATAACATCAATCTTTTCTGTTTATTTCTGGCAAAAAATGGTTCCTGTTTATTTGTAGGGAAAAAATGGTTATAAGCTTGTTGAATTTTCCATACCTATAAGAAAGCTTATTGATTTT

Coding sequence (CDS)

ATGGGTTCGGATTCAGATCCAGCAATTCATGGCCGGTCACGGATCGGGTACTATAGTCCTATAGTAGTTGAACCGGTTTTGGATTCAGATCCAGCAATTCATGTCGGGTTATGGAATTGGTTAGTCCGGTACCCACCTATTTTGCTCACCCCAAAATGGTTTATCGCGAACTCATCTGCCGAAGGTAAAATCATGGGAGACGTGGATGAATTTCGCTGTTTCGTGGGTAGCCTTTCATGGTCTACTACTGATAGAGGTCTGAGAGATGCATTTGAAAAGTATGGTCGTCTACTTGAAGCCAAAGTTGTGTTGGACAAATTTTCTGGGCGTTCTCGTGGATTTGGTTTTGTTTCTTTTGATGACAAGAGAGCTATGGAAGAAGCTATTGAGGAAATGAATGGTGTTGACCTAGATGGCCGTCCTATCACTGTGGAAAGGGCTCAACCTACCCAAGGCTCTTCTAGGGACCGAGATGACGACCGTGACCGTGACCGTGGTCGTGATCGCGGCGACCGTGACCGCGGTCGTGATCGTGGTTTTGGAGGTTCAAGGGGATCTGGTGGGGGTGGTGACTGTTTTAAATGTGGTAAGCCCGGACATTTTGCTCGTGAATGTCCATCTGATGATGGAGGTAGGGGTGGTGGTAGGTATGGAGGAAGAGGTGAAAGAAAAGGTGGTAGCTATGGACCTGACCGCGGCGGTGATCGCGGCGGTGACCGTGGTGGGGATCGCTATAGTGGCGGAGGGGGAGGTGGAGGTGGACGTTACAGAGATTCTGGTAGCCGTGGAGGAGGATATGGAAGTGATAGGTACAGCCGCGACCGTTCTGGCCCATATGACCGCGCAGGATCTGGGGGCTACCGCTAA

Protein sequence

MGSDSDPAIHGRSRIGYYSPIVVEPVLDSDPAIHVGLWNWLVRYPPILLTPKWFIANSSAEGKIMGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13579.1	Spo13579.1	mRNA

Homology

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BLAST of Spo13579.1 vs. NCBI nr
Match: gi|902172914|gb|KNA08186.1| (hypothetical protein SOVF_164880 [Spinacia oleracea])

HSP 1 Score: 378.6 bits (971), Expect = 9.500e-102
Identity = 205/224 (91.52%), Postives = 205/224 (91.52%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA
Sbjct: 1   MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSR 184
           MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDR                   SR
Sbjct: 61  MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDR-------------------SR 120

Query: 185 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR 244
           GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR
Sbjct: 121 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR 180

Query: 245 YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR
Sbjct: 181 YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 205

[Close]

BLAST of Spo13579.1 vs. NCBI nr
Match: gi|731313438|ref|XP_010680268.1| (PREDICTED: glycine-rich RNA-binding protein RZ1A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 367.9 bits (943), Expect = 1.700e-98
Identity = 207/229 (90.39%), Postives = 213/229 (93.01%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           MGDVDEFRCFVGSLSWSTTDRGL+DAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA
Sbjct: 1   MGDVDEFRCFVGSLSWSTTDRGLKDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRG---DRDRGRDRGF- 184
           MEEAIEEMNG+DLDGRPITVERAQPTQGSSRDRD D DRDRGRDRG   DRDR R RG+ 
Sbjct: 61  MEEAIEEMNGMDLDGRPITVERAQPTQGSSRDRDGDYDRDRGRDRGRDRDRDRERPRGYG 120

Query: 185 GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGS-YGPDRGGDRGGD 244
           GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGG  YGP    DRGGD
Sbjct: 121 GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGGHYGP----DRGGD 180

Query: 245 RGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           RGGDRYSGGGGGGGGRYRDSGSR GGYG+DRYSRDRSGPY+R G+GGYR
Sbjct: 181 RGGDRYSGGGGGGGGRYRDSGSR-GGYGNDRYSRDRSGPYERPGAGGYR 224

[Close]

BLAST of Spo13579.1 vs. NCBI nr
Match: gi|661899499|emb|CDO97493.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 260.8 bits (665), Expect = 2.900e-66
Identity = 156/225 (69.33%), Postives = 175/225 (77.78%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M DV E+RCF+G+LSWST+DRGL+DAFEK+G L+EAKVV+DKFSGRSRGFGFV+FD+K A
Sbjct: 1   MSDVAEYRCFIGNLSWSTSDRGLKDAFEKFGHLIEAKVVMDKFSGRSRGFGFVTFDEKDA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSR 184
           MEEAI  MNG+DLDGRPITV++AQP QG  RD D  RDRDRGRDR  RD      +GG R
Sbjct: 61  MEEAIHAMNGMDLDGRPITVDKAQPNQGGDRDIDRPRDRDRGRDRDRRD------YGGGR 120

Query: 185 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDR-GGDRGGD 244
           GSGGG DCFKCGKPGHFARECP DDGGRG  RYGGR +R GGS G  RGG R G +R GD
Sbjct: 121 GSGGG-DCFKCGKPGHFARECP-DDGGRGN-RYGGRDDRYGGSGGGGRGGGRYGPERNGD 180

Query: 245 RYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           R+       G R RD G  GGG   DRY+RDRSGPYDR GSGG+R
Sbjct: 181 RF-------GSRNRDGGGHGGG---DRYNRDRSGPYDRRGSGGFR 206

[Close]

BLAST of Spo13579.1 vs. NCBI nr
Match: gi|992161641|gb|KXG24163.1| (hypothetical protein SORBI_007G002200 [Sorghum bicolor])

HSP 1 Score: 260.4 bits (664), Expect = 3.800e-66
Identity = 161/231 (69.70%), Postives = 174/231 (75.32%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M DVDEFRCFVGSLSWSTT+  L+DAF K+G L EAKVVLDKFSGRSRGFGFV+FDDK++
Sbjct: 1   MSDVDEFRCFVGSLSWSTTEADLKDAFRKFGHLTEAKVVLDKFSGRSRGFGFVTFDDKKS 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRG-----RDRGDRDRGRDRG 184
           MEEAIE MNG+DLDGR ITVERAQ     SRDRD DRD  RG     R RGD  RGRD G
Sbjct: 61  MEEAIEAMNGMDLDGRNITVERAQAQSSGSRDRDGDRDYSRGGGDRDRYRGDYSRGRDHG 120

Query: 185 --FGGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRG 244
             FGG RG GGGGDCFKCGKPGHFARECPSDDGGR G RYG R ++ GGS G  R    G
Sbjct: 121 RDFGGGRG-GGGGDCFKCGKPGHFARECPSDDGGR-GDRYGSRDDKYGGSNGSSR---YG 180

Query: 245 GDRGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
            DRGGDRYSG         RD GSR GG GSDRY+RD+SGPY+R   GGY+
Sbjct: 181 PDRGGDRYSGS--------RDGGSRNGG-GSDRYNRDKSGPYERPSRGGYK 217

[Close]

BLAST of Spo13579.1 vs. NCBI nr
Match: gi|225463887|ref|XP_002264022.1| (PREDICTED: glycine-rich RNA-binding protein RZ1A [Vitis vinifera])

HSP 1 Score: 259.2 bits (661), Expect = 8.400e-66
Identity = 151/218 (69.27%), Postives = 177/218 (81.19%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M + +E+RCF+G LSWST+DR L++AFEK+G L+EAKVV+DKFSGRSRGFGFVSFDDK+A
Sbjct: 1   MSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDR-GDRDRGRDRGFGGS 184
           ME+AI+EM+G+DLDGR ITV++AQP QGS RDRD DRDRDRGRDR  DRDR RD  +GG 
Sbjct: 61  MEDAIKEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDRDRNRD--YGGG 120

Query: 185 RGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGD 244
           RGS GG +CFKCGKPGHFARECPS +G RGG RYGGR ++ GG  G   GG  G DR GD
Sbjct: 121 RGSNGG-ECFKCGKPGHFARECPSSEGARGG-RYGGRDDKYGGGGGGGSGGRYGPDRNGD 180

Query: 245 RYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDR 282
           RY       GGR +D+GSRGG  G+DRYSRDRSGPY+R
Sbjct: 181 RY-------GGRSKDAGSRGGS-GNDRYSRDRSGPYER 206

[Close]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNN6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164880 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 6.600e-102
Identity = 205/224 (91.52%), Postives = 205/224 (91.52%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA
Sbjct: 1   MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSR 184
           MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDR                   SR
Sbjct: 61  MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDR-------------------SR 120

Query: 185 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR 244
           GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR
Sbjct: 121 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDR 180

Query: 245 YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR
Sbjct: 181 YSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 205

[Close]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D597_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011090 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 207/229 (90.39%), Postives = 213/229 (93.01%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           MGDVDEFRCFVGSLSWSTTDRGL+DAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA
Sbjct: 1   MGDVDEFRCFVGSLSWSTTDRGLKDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRG---DRDRGRDRGF- 184
           MEEAIEEMNG+DLDGRPITVERAQPTQGSSRDRD D DRDRGRDRG   DRDR R RG+ 
Sbjct: 61  MEEAIEEMNGMDLDGRPITVERAQPTQGSSRDRDGDYDRDRGRDRGRDRDRDRERPRGYG 120

Query: 185 GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGS-YGPDRGGDRGGD 244
           GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGG  YGP    DRGGD
Sbjct: 121 GGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGGHYGP----DRGGD 180

Query: 245 RGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           RGGDRYSGGGGGGGGRYRDSGSR GGYG+DRYSRDRSGPY+R G+GGYR
Sbjct: 181 RGGDRYSGGGGGGGGRYRDSGSR-GGYGNDRYSRDRSGPYERPGAGGYR 224

[Close]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Match: F6HW88_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0166g00180 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.900e-67
Identity = 154/231 (66.67%), Postives = 182/231 (78.79%), Query Frame = 1

		  
Query: 52  KWFIANSSAEGKIMGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRS 111
           KW+     +  K M + +E+RCF+G LSWST+DR L++AFEK+G L+EAKVV+DKFSGRS
Sbjct: 67  KWYYKTGMSV-KQMSEHEEYRCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRS 126

Query: 112 RGFGFVSFDDKRAMEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDR-G 171
           RGFGFVSFDDK+AME+AI+EM+G+DLDGR ITV++AQP QGS RDRD DRDRDRGRDR  
Sbjct: 127 RGFGFVSFDDKQAMEDAIKEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYN 186

Query: 172 DRDRGRDRGFGGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGP 231
           DRDR RD  +GG RGS GG +CFKCGKPGHFARECPS +G RGG RYGGR ++ GG  G 
Sbjct: 187 DRDRNRD--YGGGRGSNGG-ECFKCGKPGHFARECPSSEGARGG-RYGGRDDKYGGGGGG 246

Query: 232 DRGGDRGGDRGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDR 282
             GG  G DR GDRY       GGR +D+GSRGG  G+DRYSRDRSGPY+R
Sbjct: 247 GSGGRYGPDRNGDRY-------GGRSKDAGSRGGS-GNDRYSRDRSGPYER 284

[Close]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Match: A0A068TQ53_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014849001 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.000e-66
Identity = 156/225 (69.33%), Postives = 175/225 (77.78%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M DV E+RCF+G+LSWST+DRGL+DAFEK+G L+EAKVV+DKFSGRSRGFGFV+FD+K A
Sbjct: 1   MSDVAEYRCFIGNLSWSTSDRGLKDAFEKFGHLIEAKVVMDKFSGRSRGFGFVTFDEKDA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSR 184
           MEEAI  MNG+DLDGRPITV++AQP QG  RD D  RDRDRGRDR  RD      +GG R
Sbjct: 61  MEEAIHAMNGMDLDGRPITVDKAQPNQGGDRDIDRPRDRDRGRDRDRRD------YGGGR 120

Query: 185 GSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDR-GGDRGGD 244
           GSGGG DCFKCGKPGHFARECP DDGGRG  RYGGR +R GGS G  RGG R G +R GD
Sbjct: 121 GSGGG-DCFKCGKPGHFARECP-DDGGRGN-RYGGRDDRYGGSGGGGRGGGRYGPERNGD 180

Query: 245 RYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
           R+       G R RD G  GGG   DRY+RDRSGPYDR GSGG+R
Sbjct: 181 RF-------GSRNRDGGGHGGG---DRYNRDRSGPYDRRGSGGFR 206

[Close]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Match: A0A0A9T1B4_ARUDO (Uncharacterized protein OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.600e-66
Identity = 165/233 (70.82%), Postives = 176/233 (75.54%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M D DE+RCFVGSLSWSTT+  L+DAF K+GRL EAKVVLDKFSGRSRGFGFV+FDDK+A
Sbjct: 1   MSDADEYRCFVGSLSWSTTEVDLKDAFGKFGRLTEAKVVLDKFSGRSRGFGFVTFDDKKA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRG---RDRG------DRDRG 184
           MEEAIE MNG+DLDGR ITVERAQP QGS RDR  DRD  RG   RDR       DRDRG
Sbjct: 61  MEEAIEAMNGMDLDGRNITVERAQP-QGSGRDRGGDRDYSRGGSDRDRSHGDYGRDRDRG 120

Query: 185 RDRGFGGSRGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGD 244
           RD  FGG R  GGGGDCFKCGKPGHFARECPSDDGGR G RYG R +R GGS G  R   
Sbjct: 121 RD--FGGGR--GGGGDCFKCGKPGHFARECPSDDGGR-GDRYGSRDDRYGGSNGSSR--- 180

Query: 245 RGGDRGGDRYSGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGGYR 289
            G DRGGDRYS        R RD GSR GG GSDRY+RD+SGPY+R   GGYR
Sbjct: 181 YGPDRGGDRYS--------RSRDGGSRNGG-GSDRYNRDKSGPYERPSRGGYR 215

[Close]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Match: RZ1A_ARATH (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana GN=RZ1A PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.300e-46
Identity = 139/257 (54.09%), Postives = 164/257 (63.81%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M +  E+RCF+G L+W+T+DRGLRDAFEKYG L+EAKVVLDKFSGRSRGFGF++FD+K+A
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSS-RDRDDDRDRDRGRDRGDRDRGRDRGFGGS 184
           M+EAI  MNG+DLDGR ITV++AQP QG + RD D DR RDRG DR DR R         
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDR-DRSR--------P 120

Query: 185 RGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGER---KGGSYG--PDRGG---D 244
            G  GGGDCFKCGKPGHFARECPS+    GGGR+  + +R   K   YG   DR G   D
Sbjct: 121 SGGRGGGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKDDRYGAKED 180

Query: 245 RGGDRG------GDRYS------GGGGGGGGRY-------------RDSGSRGGGYGSDR 288
           R G +        DRYS      G   GGG RY             RD GSRG   G +R
Sbjct: 181 RYGAKDDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGAP-GGER 240

[Close]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Match: RBG8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=RBG8 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.600e-24
Identity = 86/183 (46.99%), Postives = 108/183 (59.02%), Query Frame = 1

		  
Query: 70  EFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAI 129
           E+RCFVG L+W+T D  L+  F ++G ++++K++ D+ SGRSRGFGFV+F D++AM +AI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 130 EEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGG 189
           EEMNG +LDGR ITV  AQ ++GS            G  RG    G   G GG    GGG
Sbjct: 65  EEMNGKELDGRVITVNEAQ-SRGSGGG---------GGGRGGSGGGYRSGGGGGYSGGGG 124

Query: 190 GDCFKCGKPGHFARECPSDDGGRGGGR-YGGRGERKGGSYGPDRGGDRGGDRGGDRYSGG 249
           G     G  G+  R      GG GGGR YGG G R+GG YG       GGD  G  Y GG
Sbjct: 125 GGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYG-------GGD--GGSYGGG 168

Query: 250 GGG 252
           GGG
Sbjct: 185 GGG 168

[Close]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.400e-23
Identity = 83/186 (44.62%), Postives = 107/186 (57.53%), Query Frame = 1

		  
Query: 70  EFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAI 129
           E+RCFVG L+W+T +R L  AF ++G L+++K++ D+ +GRSRGFGFV+F D+++M++AI
Sbjct: 7   EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 130 EEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGG 189
           E MNG DLDGR ITV  AQ                RG   G   RG   G+ G  G GGG
Sbjct: 67  EGMNGQDLDGRSITVNEAQ---------------SRGSGAGGGGRGGGGGYRGGGGYGGG 126

Query: 190 GDCFKCGKP---GHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDRYS 249
           G  +  G+    G+          G GGG YGG G R GG YG       GG+ GG  Y 
Sbjct: 127 GGGYGGGRREGGGYSGGGGGYSSRGGGGGGYGGGGRRDGGGYG-------GGEGGG--YG 168

Query: 250 GGGGGG 253
           GGGGGG
Sbjct: 187 GGGGGG 168

[Close]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Match: RBG7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.100e-23
Identity = 95/221 (42.99%), Postives = 120/221 (54.30%), Query Frame = 1

		  
Query: 66  GDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAM 125
           GDV E+RCFVG L+W+T DR L  AF +YG ++++K++ D+ +GRSRGFGFV+F D++AM
Sbjct: 4   GDV-EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 63

Query: 126 EEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRG 185
           ++AIE MNG DLDGR ITV  AQ ++GS                         G GG RG
Sbjct: 64  KDAIEGMNGQDLDGRSITVNEAQ-SRGSG------------------------GGGGHRG 123

Query: 186 SGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDRY 245
            GGGG  ++ G  G ++          GGG YGG G R+ G  G   GG     RGG   
Sbjct: 124 GGGGG--YRSGGGGGYS---------GGGGSYGGGGGRREGGGGYSGGGGGYSSRGG--- 174

Query: 246 SGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGG 287
            GGG  GGGR    G  GGG G         G Y  +G GG
Sbjct: 184 -GGGSYGGGRREGGGGYGGGEG---------GGYGGSGGGG 174

[Close]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.300e-22
Identity = 89/198 (44.95%), Postives = 110/198 (55.56%), Query Frame = 1

		  
Query: 70  EFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAI 129
           E+RCFVG L+W+T DR L  AF +YG +L++K++ D+ +GRSRGFGFV+F D+++M++AI
Sbjct: 7   EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 130 EEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGG 189
           E MNG DLDGR ITV  AQ                             RG GG  G  GG
Sbjct: 67  EGMNGQDLDGRSITVNEAQ----------------------------SRGSGGGGGGRGG 126

Query: 190 GDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDRYSGGG 249
           G  ++ G  G +         G GGG YGG G R+GG  G   GG     RGG    GGG
Sbjct: 127 GGGYRSGGGGGY---------GGGGGGYGG-GGREGGYSG---GGGGYSSRGG----GGG 158

Query: 250 GGGGGRYRDSGSRGGGYG 268
           G GGG  RD G  GGGYG
Sbjct: 187 GYGGGGRRD-GGEGGGYG 158

[Close]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 186.8 bits (473), Expect = 1.900e-47
Identity = 139/257 (54.09%), Postives = 164/257 (63.81%), Query Frame = 1

		  
Query: 65  MGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRA 124
           M +  E+RCF+G L+W+T+DRGLRDAFEKYG L+EAKVVLDKFSGRSRGFGF++FD+K+A
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 125 MEEAIEEMNGVDLDGRPITVERAQPTQGSS-RDRDDDRDRDRGRDRGDRDRGRDRGFGGS 184
           M+EAI  MNG+DLDGR ITV++AQP QG + RD D DR RDRG DR DR R         
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRGRDRGYDR-DRSR--------P 120

Query: 185 RGSGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGER---KGGSYG--PDRGG---D 244
            G  GGGDCFKCGKPGHFARECPS+    GGGR+  + +R   K   YG   DR G   D
Sbjct: 121 SGGRGGGDCFKCGKPGHFARECPSESSRDGGGRFSSKDDRYSSKDDRYGAKDDRYGAKED 180

Query: 245 RGGDRG------GDRYS------GGGGGGGGRY-------------RDSGSRGGGYGSDR 288
           R G +        DRYS      G   GGG RY             RD GSRG   G +R
Sbjct: 181 RYGAKDDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDRSGERAGGRSRDGGSRGAP-GGER 240

[Close]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1)

HSP 1 Score: 114.8 bits (286), Expect = 9.000e-26
Identity = 86/183 (46.99%), Postives = 108/183 (59.02%), Query Frame = 1

		  
Query: 70  EFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAI 129
           E+RCFVG L+W+T D  L+  F ++G ++++K++ D+ SGRSRGFGFV+F D++AM +AI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 130 EEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGG 189
           EEMNG +LDGR ITV  AQ ++GS            G  RG    G   G GG    GGG
Sbjct: 65  EEMNGKELDGRVITVNEAQ-SRGSGGG---------GGGRGGSGGGYRSGGGGGYSGGGG 124

Query: 190 GDCFKCGKPGHFARECPSDDGGRGGGR-YGGRGERKGGSYGPDRGGDRGGDRGGDRYSGG 249
           G     G  G+  R      GG GGGR YGG G R+GG YG       GGD  G  Y GG
Sbjct: 125 GGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYG-------GGD--GGSYGGG 168

Query: 250 GGG 252
           GGG
Sbjct: 185 GGG 168

[Close]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Match: AT2G21660.1 (cold, circadian rhythm, and rna binding 2)

HSP 1 Score: 109.8 bits (273), Expect = 2.900e-24
Identity = 95/221 (42.99%), Postives = 120/221 (54.30%), Query Frame = 1

		  
Query: 66  GDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAM 125
           GDV E+RCFVG L+W+T DR L  AF +YG ++++K++ D+ +GRSRGFGFV+F D++AM
Sbjct: 4   GDV-EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAM 63

Query: 126 EEAIEEMNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRG 185
           ++AIE MNG DLDGR ITV  AQ ++GS                         G GG RG
Sbjct: 64  KDAIEGMNGQDLDGRSITVNEAQ-SRGSG------------------------GGGGHRG 123

Query: 186 SGGGGDCFKCGKPGHFARECPSDDGGRGGGRYGGRGERKGGSYGPDRGGDRGGDRGGDRY 245
            GGGG  ++ G  G ++          GGG YGG G R+ G  G   GG     RGG   
Sbjct: 124 GGGGG--YRSGGGGGYS---------GGGGSYGGGGGRREGGGGYSGGGGGYSSRGG--- 174

Query: 246 SGGGGGGGGRYRDSGSRGGGYGSDRYSRDRSGPYDRAGSGG 287
            GGG  GGGR    G  GGG G         G Y  +G GG
Sbjct: 184 -GGGSYGGGRREGGGGYGGGEG---------GGYGGSGGGG 174

[Close]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain)

HSP 1 Score: 103.2 bits (256), Expect = 2.700e-22
Identity = 101/228 (44.30%), Postives = 127/228 (55.70%), Query Frame = 1

		  
Query: 72  RCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVSFDDKRAMEEAIEE 131
           R FVG LS   TDR L  AF ++G +L+ +++L++ +GRSRGFGF++F D+RAM+E+I E
Sbjct: 8   RIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIRE 67

Query: 132 MNGVDLDGRPITVERAQPTQGSSRDRDDDRDRDRGRDRGDRDRGRDRGFGGSRGSGGGG- 191
           M+G D   R I+V RA+P  G    RDD         RG RD G      GS G GGGG 
Sbjct: 68  MHGRDFGDRVISVNRAEPKLG----RDDGESHG---SRGGRDSGYSIAGKGSFGGGGGGG 127

Query: 192 ------DCFKCGKPGHFARECPSDDGGRGG--GRYGGRGERKGGSYG-PDRGGDRGGDRG 251
                 +CFKCG+ GH+AR+CPS  GGRGG  G +  R    GGS G  DR  DR     
Sbjct: 128 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 187

Query: 252 GDRYSGGGGGGGGRY--RDS-GSRGGGYGSDRYSRDR-SGPYDRAGSG 286
            +RY      G  RY  RD   SR      DRY+ DR + P DR   G
Sbjct: 188 RERYIDDRYDGAARYGARDRFDSREAYIPRDRYASDRYAAPADRFAGG 228

[Close]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Match: AT3G53460.4 (chloroplast RNA-binding protein 29)

HSP 1 Score: 84.0 bits (206), Expect = 1.700e-16
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 1

		  
Query: 59  SAEGKIMGDVDEFRCFVGSLSWSTTDRGLRDAFEKYGRLLEAKVVLDKFSGRSRGFGFVS 118
           S  G   G     R +VG+LSW   D  L + F + G+++EA+V+ D+ SGRS+GFGFV+
Sbjct: 266 SGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVT 325

Query: 119 FDDKRAMEEAIEEMNGVDLDGRPITVERAQ 149
               + +++AI  +NG DLDGR I V  A+
Sbjct: 326 LSSSQEVQKAINSLNGADLDGRQIRVSEAE 355

The following BLAST results are available for this feature:

BLAST of Spo13579.1 vs. NCBI nr
BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
BLAST of Spo13579.1 vs. TAIR (Arabidopsis)

BLAST of Spo13579.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902172914\|gb\|KNA08186.1\|	9.5e-102	91.5	hypothetical protein SOVF_1648...	[more]
gi\|731313438\|ref\|XP_010680268.1\|	1.7e-98	90.3	PREDICTED: glycine-rich RNA-bi...	[more]
gi\|661899499\|emb\|CDO97493.1\|	2.9e-66	69.3	unnamed protein product [Coffe...	[more]
gi\|992161641\|gb\|KXG24163.1\|	3.8e-66	69.7	hypothetical protein SORBI_007...	[more]
gi\|225463887\|ref\|XP_002264022.1\|	8.4e-66	69.2	PREDICTED: glycine-rich RNA-bi...	[more]

BLAST of Spo13579.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QNN6_SPIOL	6.6e-102	91.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8D597_BETVU	1.2e-98	90.3	Uncharacterized protein OS=Bet...	[more]
F6HW88_VITVI	6.9e-67	66.6	Putative uncharacterized prote...	[more]
A0A068TQ53_COFCA	2.0e-66	69.3	Uncharacterized protein OS=Cof...	[more]
A0A0A9T1B4_ARUDO	2.6e-66	70.8	Uncharacterized protein OS=Aru...	[more]

BLAST of Spo13579.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RZ1A_ARATH	3.3e-46	54.0	Glycine-rich RNA-binding prote...	[more]
RBG8_ARATH	1.6e-24	46.9	Glycine-rich RNA-binding prote...	[more]
GRP2_SINAL	1.4e-23	44.6	Glycine-rich RNA-binding prote...	[more]
RBG7_ARATH	5.1e-23	42.9	Glycine-rich RNA-binding prote...	[more]
GRP1_SINAL	3.3e-22	44.9	Glycine-rich RNA-binding prote...	[more]

BLAST of Spo13579.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G26420.1	1.9e-47	54.0	RNA-binding (RRM/RBD/RNP motif...	[more]
AT4G39260.1	9.0e-26	46.9	cold, circadian rhythm, and RN...	[more]
AT2G21660.1	2.9e-24	42.9	cold, circadian rhythm, and rn...	[more]
AT5G04280.1	2.7e-22	44.3	RNA-binding (RRM/RBD/RNP motif...	[more]
AT3G53460.4	1.7e-16	42.2	chloroplast RNA-binding protei...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 74..142 score: 2.3
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 72..145 score: 9.0
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 71..149 score: 20
IPR001878	Zinc finger, CCHC-type	GENE3D	4.10.60.10		coord: 190..207 score: 1.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 192..207 score: 8.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 191..207 score: 3.
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 192..207 score: 11
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 176..212 score: 5.9
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 69..150 score: 1.0
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 68..179 score: 5.1
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 67..149 score: 6.5E-27coord: 221..278 score: 6.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006885	regulation of pH
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:1990570	GDP-mannose transmembrane transport
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0032502	developmental process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006882	cellular zinc ion homeostasis
biological_process	GO:0006075	(1->3)-beta-D-glucan biosynthetic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0052543	callose deposition in cell wall
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0009624	response to nematode
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0006346	methylation-dependent chromatin silencing
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0006810	transport
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006396	RNA processing
biological_process	GO:0007165	signal transduction
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0061025	membrane fusion
biological_process	GO:0009556	microsporogenesis
biological_process	GO:0009637	response to blue light
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0048767	root hair elongation
biological_process	GO:0031929	TOR signaling
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0010467	gene expression
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0071702	organic substance transport
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0050793	regulation of developmental process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0048731	system development
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006011	UDP-glucose metabolic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0030001	metal ion transport
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0043687	post-translational protein modification
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0043087	regulation of GTPase activity
biological_process	GO:0071494	cellular response to UV-C
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010212	response to ionizing radiation
biological_process	GO:0071555	cell wall organization
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0019985	translesion synthesis
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0097502	mannosylation
biological_process	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0009932	cell tip growth
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0048364	root development
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0006897	endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0051641	cellular localization
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0034645	cellular macromolecule biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0016255	attachment of GPI anchor to protein
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0015969	guanosine tetraphosphate metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008033	tRNA processing
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0048825	cotyledon development
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0006869	lipid transport
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0043547	positive regulation of GTPase activity
biological_process	GO:0048765	root hair cell differentiation
biological_process	GO:0002237	response to molecule of bacterial origin
biological_process	GO:0009408	response to heat
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0010351	lithium ion transport
biological_process	GO:0010150	leaf senescence
biological_process	GO:0052544	defense response by callose deposition in cell wall
biological_process	GO:0009871	jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0001736	establishment of planar polarity
biological_process	GO:0048367	shoot system development
biological_process	GO:0015917	aminophospholipid transport
biological_process	GO:0006812	cation transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0045332	phospholipid translocation
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0009088	threonine biosynthetic process
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0006909	phagocytosis
biological_process	GO:0007389	pattern specification process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0048653	anther development
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0006508	proteolysis
biological_process	GO:0080167	response to karrikin
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0015031	protein transport
biological_process	GO:0006397	mRNA processing
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0048443	stamen development
biological_process	GO:0045116	protein neddylation
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0015768	maltose transport
biological_process	GO:0009630	gravitropism
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0033043	regulation of organelle organization
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0051301	cell division
biological_process	GO:0043631	RNA polyadenylation
biological_process	GO:0009790	embryo development
biological_process	GO:0016571	histone methylation
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0000159	protein phosphatase type 2A complex
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0031931	TORC1 complex
cellular_component	GO:0030904	retromer complex
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0030131	clathrin adaptor complex
cellular_component	GO:0030659	cytoplasmic vesicle membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0000148	1,3-beta-D-glucan synthase complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0016529	sarcoplasmic reticulum
cellular_component	GO:0005773	vacuole
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016035	zeta DNA polymerase complex
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0010008	endosome membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0055029	nuclear DNA-directed RNA polymerase complex
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0042765	GPI-anchor transamidase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
cellular_component	GO:0005665	DNA-directed RNA polymerase II, core complex
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0000136	alpha-1,6-mannosyltransferase complex
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0019781	NEDD8 activating enzyme activity
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0004652	polynucleotide adenylyltransferase activity
molecular_function	GO:0015423	maltose-transporting ATPase activity
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005096	GTPase activator activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005351	carbohydrate:proton symporter activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0004072	aspartate kinase activity
molecular_function	GO:0004012	phospholipid-translocating ATPase activity
molecular_function	GO:0009678	hydrogen-translocating pyrophosphatase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0004377	GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0052926	dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
molecular_function	GO:0052918	dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity
molecular_function	GO:0008236	serine-type peptidase activity
molecular_function	GO:0000035	acyl binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008242	omega peptidase activity
molecular_function	GO:0004843	thiol-dependent ubiquitin-specific protease activity
molecular_function	GO:0051753	mannan synthase activity
molecular_function	GO:0047259	glucomannan 4-beta-mannosyltransferase activity
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0052826	inositol hexakisphosphate 2-phosphatase activity
molecular_function	GO:0008081	phosphoric diester hydrolase activity
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0019888	protein phosphatase regulator activity
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0004707	MAP kinase activity
molecular_function	GO:0005262	calcium channel activity
molecular_function	GO:0005388	calcium-transporting ATPase activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0015299	solute:proton antiporter activity
molecular_function	GO:0005458	GDP-mannose transmembrane transporter activity
molecular_function	GO:0035673	oligopeptide transmembrane transporter activity
molecular_function	GO:0003843	1,3-beta-D-glucan synthase activity
molecular_function	GO:0003676	nucleic acid binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo18451	0.83	Barchart \| Table
Spo05557	0.81	Barchart \| Table
Spo23908	0.80	Barchart \| Table
Spo14777	0.80	Barchart \| Table
Spo05487	0.79	Barchart \| Table
Spo14849	0.79	Barchart \| Table
Spo02984	0.78	Barchart \| Table
Spo06030	0.78	Barchart \| Table
Spo22906	0.78	Barchart \| Table
Spo02184	0.78	Barchart \| Table
Spo27226	0.78	Barchart \| Table
Spo19635	0.78	Barchart \| Table
Spo07426	0.78	Barchart \| Table
Spo14441	0.77	Barchart \| Table
Spo09949	0.77	Barchart \| Table
Spo02672	0.77	Barchart \| Table
Spo17268	0.77	Barchart \| Table
Spo18269	0.76	Barchart \| Table
Spo19559	0.76	Barchart \| Table
Spo20909	0.76	Barchart \| Table
Spo10416	0.75	Barchart \| Table
Spo13953	0.75	Barchart \| Table
Spo26806	0.75	Barchart \| Table
Spo24294	0.75	Barchart \| Table
Spo10222	0.75	Barchart \| Table
Spo16076	0.75	Barchart \| Table
Spo09260	0.75	Barchart \| Table
Spo06962	0.75	Barchart \| Table
Spo15270	0.74	Barchart \| Table
Spo15420	0.74	Barchart \| Table
Spo05515	0.74	Barchart \| Table
Spo08771	0.74	Barchart \| Table
Spo03197	0.74	Barchart \| Table
Spo08540	0.74	Barchart \| Table
Spo15911	0.74	Barchart \| Table
Spo11919	0.74	Barchart \| Table
Spo15603	0.74	Barchart \| Table
Spo19126	0.74	Barchart \| Table
Spo25292	0.74	Barchart \| Table
Spo02107	0.74	Barchart \| Table
Spo26738	0.74	Barchart \| Table
Spo13932	0.73	Barchart \| Table
Spo16127	0.73	Barchart \| Table
Spo22047	0.73	Barchart \| Table
Spo19558	0.73	Barchart \| Table
Spo16139	0.73	Barchart \| Table
Spo12156	0.73	Barchart \| Table
Spo16088	0.73	Barchart \| Table
Spo10947	0.73	Barchart \| Table
Spo07199	0.73	Barchart \| Table
Spo01998	0.73	Barchart \| Table
Spo24626	0.73	Barchart \| Table
Spo09266	0.73	Barchart \| Table
Spo06927	0.73	Barchart \| Table
Spo02941	0.73	Barchart \| Table
Spo23703	0.73	Barchart \| Table
Spo26706	0.73	Barchart \| Table
Spo06681	0.73	Barchart \| Table
Spo14194	0.72	Barchart \| Table
Spo19617	0.72	Barchart \| Table
Spo19089	0.72	Barchart \| Table
Spo02681	0.72	Barchart \| Table
Spo02731	0.72	Barchart \| Table
Spo26190	0.72	Barchart \| Table
Spo25189	0.72	Barchart \| Table
Spo04923	0.72	Barchart \| Table
Spo00049	0.72	Barchart \| Table
Spo05192	0.72	Barchart \| Table
Spo07184	0.72	Barchart \| Table
Spo00751	0.72	Barchart \| Table
Spo27064	0.72	Barchart \| Table
Spo10969	0.72	Barchart \| Table
Spo23346	0.72	Barchart \| Table
Spo23329	0.72	Barchart \| Table
Spo23192	0.72	Barchart \| Table
Spo22970	0.72	Barchart \| Table
Spo20704	0.72	Barchart \| Table
Spo15696	0.72	Barchart \| Table
Spo00697	0.71	Barchart \| Table
Spo22747	0.71	Barchart \| Table
Spo19965	0.71	Barchart \| Table
Spo00336	0.71	Barchart \| Table
Spo11296	0.71	Barchart \| Table
Spo00723	0.71	Barchart \| Table
Spo17697	0.71	Barchart \| Table
Spo08546	0.71	Barchart \| Table
Spo14008	0.71	Barchart \| Table
Spo12942	0.71	Barchart \| Table
Spo05846	0.71	Barchart \| Table
Spo00867	0.70	Barchart \| Table
Spo10998	0.70	Barchart \| Table
Spo01873	0.70	Barchart \| Table
Spo27362	0.70	Barchart \| Table
Spo22579	0.70	Barchart \| Table
Spo08531	0.70	Barchart \| Table
Spo00570	0.70	Barchart \| Table
Spo02818	0.70	Barchart \| Table
Spo03608	0.70	Barchart \| Table
Spo19656	0.70	Barchart \| Table
Spo24594	0.70	Barchart \| Table
Spo08963	0.70	Barchart \| Table
Spo12623	0.70	Barchart \| Table
Spo12348	0.70	Barchart \| Table
Spo23664	0.70	Barchart \| Table
Spo11554	0.70	Barchart \| Table
Spo23608	0.70	Barchart \| Table
Spo14871	0.70	Barchart \| Table
Spo17239	0.70	Barchart \| Table
Spo04985	0.69	Barchart \| Table
Spo06805	0.69	Barchart \| Table
Spo04865	0.69	Barchart \| Table
Spo06915	0.69	Barchart \| Table
Spo25763	0.69	Barchart \| Table
Spo03618	0.69	Barchart \| Table
Spo23751	0.69	Barchart \| Table
Spo08851	0.69	Barchart \| Table
Spo26207	0.69	Barchart \| Table
Spo23679	0.69	Barchart \| Table
Spo02774	0.69	Barchart \| Table
Spo02619	0.69	Barchart \| Table
Spo02577	0.69	Barchart \| Table
Spo15805	0.69	Barchart \| Table
Spo10994	0.69	Barchart \| Table
Spo01097	0.69	Barchart \| Table
Spo00397	0.69	Barchart \| Table
Spo11801	0.69	Barchart \| Table
Spo26526	0.69	Barchart \| Table
Spo11993	0.69	Barchart \| Table
Spo23123	0.69	Barchart \| Table
Spo18847	0.69	Barchart \| Table
Spo26646	0.69	Barchart \| Table
Spo18770	0.69	Barchart \| Table
Spo12176	0.69	Barchart \| Table
Spo12201	0.69	Barchart \| Table
Spo01204	0.69	Barchart \| Table
Spo18764	0.69	Barchart \| Table
Spo00535	0.69	Barchart \| Table
Spo02115	0.69	Barchart \| Table
Spo14275	0.69	Barchart \| Table
Spo21493	0.69	Barchart \| Table
Spo19518	0.69	Barchart \| Table
Spo17021	0.69	Barchart \| Table
Spo05631	0.69	Barchart \| Table
Spo05655	0.69	Barchart \| Table
Spo05707	0.69	Barchart \| Table
Spo05514	0.69	Barchart \| Table
Spo00694	0.69	Barchart \| Table
Spo13179	0.68	Barchart \| Table
Spo18244	0.68	Barchart \| Table
Spo18147	0.68	Barchart \| Table
Spo21650	0.68	Barchart \| Table
Spo17959	0.68	Barchart \| Table
Spo04479	0.68	Barchart \| Table
Spo16732	0.68	Barchart \| Table
Spo03196	0.68	Barchart \| Table
Spo19722	0.68	Barchart \| Table
Spo23355	0.68	Barchart \| Table
Spo16759	0.68	Barchart \| Table
Spo10850	0.68	Barchart \| Table
Spo06291	0.68	Barchart \| Table
Spo24309	0.68	Barchart \| Table
Spo25033	0.68	Barchart \| Table
Spo14661	0.68	Barchart \| Table
Spo01370	0.68	Barchart \| Table
Spo08013	0.68	Barchart \| Table
Spo17032	0.68	Barchart \| Table
Spo05874	0.68	Barchart \| Table
Spo07974	0.68	Barchart \| Table
Spo16082	0.68	Barchart \| Table
Spo19701	0.68	Barchart \| Table
Spo10595	0.68	Barchart \| Table
Spo12368	0.68	Barchart \| Table
Spo01600	0.68	Barchart \| Table
Spo02606	0.68	Barchart \| Table
Spo23503	0.68	Barchart \| Table
Spo26482	0.68	Barchart \| Table
Spo08999	0.68	Barchart \| Table
Spo30023	0.67	Barchart \| Table
Spo00249	0.67	Barchart \| Table
Spo00581	0.67	Barchart \| Table
Spo00936	0.67	Barchart \| Table
Spo01048	0.67	Barchart \| Table
Spo01181	0.67	Barchart \| Table
Spo01313	0.67	Barchart \| Table
Spo02203	0.67	Barchart \| Table
Spo03590	0.67	Barchart \| Table
Spo05029	0.67	Barchart \| Table
Spo06041	0.67	Barchart \| Table
Spo07652	0.67	Barchart \| Table
Spo08272	0.67	Barchart \| Table
Spo08528	0.67	Barchart \| Table
Spo09234	0.67	Barchart \| Table
Spo10415	0.67	Barchart \| Table
Spo10673	0.67	Barchart \| Table
Spo11095	0.67	Barchart \| Table
Spo11260	0.67	Barchart \| Table
Spo11325	0.67	Barchart \| Table
Spo12128	0.67	Barchart \| Table
Spo12236	0.67	Barchart \| Table
Spo12521	0.67	Barchart \| Table
Spo13459	0.67	Barchart \| Table
Spo14687	0.67	Barchart \| Table
Spo15367	0.67	Barchart \| Table
Spo15865	0.67	Barchart \| Table
Spo15997	0.67	Barchart \| Table
Spo16384	0.67	Barchart \| Table
Spo16421	0.67	Barchart \| Table
Spo17388	0.67	Barchart \| Table
Spo17921	0.67	Barchart \| Table
Spo18253	0.67	Barchart \| Table
Spo18691	0.67	Barchart \| Table
Spo19191	0.67	Barchart \| Table
Spo20242	0.67	Barchart \| Table
Spo21199	0.67	Barchart \| Table
Spo21491	0.67	Barchart \| Table
Spo22956	0.67	Barchart \| Table
Spo23717	0.67	Barchart \| Table
Spo23946	0.67	Barchart \| Table
Spo23957	0.67	Barchart \| Table
Spo25497	0.67	Barchart \| Table
Spo26266	0.67	Barchart \| Table
Spo26426	0.67	Barchart \| Table
Spo27347	0.67	Barchart \| Table
Spo26172	0.66	Barchart \| Table
Spo02498	0.66	Barchart \| Table
Spo20281	0.66	Barchart \| Table
Spo00898	0.66	Barchart \| Table
Spo24122	0.66	Barchart \| Table
Spo24241	0.66	Barchart \| Table
Spo06819	0.66	Barchart \| Table
Spo06616	0.66	Barchart \| Table
Spo05928	0.66	Barchart \| Table
Spo24625	0.66	Barchart \| Table
Spo25013	0.66	Barchart \| Table
Spo04450	0.66	Barchart \| Table
Spo04146	0.66	Barchart \| Table
Spo04085	0.66	Barchart \| Table
Spo25445	0.66	Barchart \| Table
Spo20065	0.66	Barchart \| Table
Spo02960	0.66	Barchart \| Table
Spo00175	0.66	Barchart \| Table
Spo00346	0.66	Barchart \| Table
Spo02871	0.66	Barchart \| Table
Spo17589	0.66	Barchart \| Table
Spo17379	0.66	Barchart \| Table
Spo16919	0.66	Barchart \| Table
Spo16881	0.66	Barchart \| Table
Spo16689	0.66	Barchart \| Table
Spo16325	0.66	Barchart \| Table
Spo14965	0.66	Barchart \| Table
Spo20826	0.66	Barchart \| Table
Spo14856	0.66	Barchart \| Table
Spo21341	0.66	Barchart \| Table
Spo14424	0.66	Barchart \| Table
Spo13475	0.66	Barchart \| Table
Spo13424	0.66	Barchart \| Table
Spo22187	0.66	Barchart \| Table
Spo12663	0.66	Barchart \| Table
Spo12253	0.66	Barchart \| Table
Spo12155	0.66	Barchart \| Table
Spo11027	0.66	Barchart \| Table
Spo23507	0.66	Barchart \| Table
Spo10053	0.66	Barchart \| Table
Spo23617	0.66	Barchart \| Table
Spo09819	0.66	Barchart \| Table
Spo09351	0.66	Barchart \| Table
Spo09111	0.66	Barchart \| Table
Spo07753	0.66	Barchart \| Table
Spo27004	0.66	Barchart \| Table
Spo20566	0.65	Barchart \| Table
Spo17310	0.65	Barchart \| Table
Spo18962	0.65	Barchart \| Table
Spo00499	0.65	Barchart \| Table
Spo02013	0.65	Barchart \| Table
Spo03973	0.65	Barchart \| Table
Spo01914	0.65	Barchart \| Table
Spo17386	0.65	Barchart \| Table
Spo05127	0.65	Barchart \| Table
Spo01185	0.65	Barchart \| Table
Spo24706	0.65	Barchart \| Table
Spo22538	0.65	Barchart \| Table
Spo12749	0.65	Barchart \| Table
Spo07265	0.65	Barchart \| Table
Spo03048	0.65	Barchart \| Table
Spo01259	0.65	Barchart \| Table
Spo19206	0.65	Barchart \| Table
Spo12024	0.65	Barchart \| Table
Spo11266	0.65	Barchart \| Table
Spo11243	0.65	Barchart \| Table
Spo17678	0.65	Barchart \| Table
Spo10940	0.65	Barchart \| Table
Spo10224	0.65	Barchart \| Table