Spo13669 (gene)

Overview
NameSpo13669
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (6.4.1.2)
LocationSpoScf_00725 : 149822 .. 152176 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAAAAGAGTAATTGAACAAACATTGAATAAGACAGTACCTGAAGGTTCACAAGCAGCCGAATTTTTATTCCATAAGGGTTTATTTGATCCAATCGTACCGCGTAATCTTTTAAAAGGCGTTCTAAGCGAGTTATTTGAGCTGCATGCTTTTTTTCCTTTGAATCAAAATAAAGGCGAGGATTAAGATCAATTTTCTTATTTGTGTCAAAAAGTCTTTGTTTTTATTGGAATCTAAAGTAAAAACCAGAAGAAGAAGAATGGGGTTTTTTGTTGGCAACATCTTAAGTTTGTAATAAAAAAAGACTTCAAAAAAAATGTGAATAATTAGAAATTATTTTTTATATTTCCGATTCCTAATTAGGAAAACTCGATCAACAAGATAAAAGAACGACTTGTTCTTTTTCCTTCTGTGAAAATTAGTGAAATAAAAAATTTTTATGTTTCCTTATTACACTTACATATGGATAGAATTAAAAAAGAACTTTTTGTTTGGTCTGGGAATTTTTATTTAAAATATATTTTGGATCAGACTCTAACAACTCTTTTGGAAATTTCTAATAAACCTTATATTTTCTTGAATTAATAGAAGCAAAAGGACGAAAAAAAAACAGAAAGGAAAGTCAATCATATATTATATGTAGAAATCCAATTTCTTTTTTAGTTCTACATTTCTTGTACTTATTATATATACTTTCTTATAGAATTCTAATTAATTAATTAATATAATAACAACAAAAAAATATAACAAACAGGTACAATTACAATATCGTAAATTGAGGTACCCATTTTATAACAACTATGAACTTTCCCTCTATTTTTGTGCCTTTAGTAGGCCTTGTATTTCCGGCAATTGCAATGGCTTCTTTATTTCTTTATGTTAAAAAAAATAAGATTGTTTAGATTTTATGGTCCAAATTTCAAGACTTAGGCTTGAATCATAACACATATATCAATTTAGCGGAATGGTATACCACGCGATTTCTTTCGAACATAAATGAAAGAAAGAGCCCTTAATGCTTATGTATGTGATGTATATGGAAAGATGACGACATAGGGGTAGATTTTATTATTTTGATCGAACTAAATAAAAATAGAGTTAGATATTTAAATTTATAAATAAAAGTAAAAGTGAAACACATCCGACATCAGAATAGTACTAGTTGATGAGAGTTACATCGGAAACAAGGCAGAGTAAGGAAAGTCCAATTCATTTTGGGTATTCTTTCAATTCAAATTTAATGCAACCAGATCTAGTATGAATTGGCGATCAGAACGTATATGGGTAGAATTTATAACGGGATCTCGAAAAATAAGTAATTTCTGCTGGGCCTTTATACTTTTTTTAGGTTCATCAGGATTTTTATTGGTTGGAATTTCCAGCTAACTTGGTAAGAATTTTATATCTTTATTTCCCCCCAGCAAATTCTTTTTTTTCCACAAGGGCTGGTGATGTCTTTTTATGGGATTGCAGGCCTCTTTATTAGCGCCTACTTGTGGTGTGCAATTTCATGGAATGTAGGTNTCTTTCTATGGGATTGCAGGCCTCTTTATTAGCGCCTACTTGTGGTGTGCAATTTCATGGAATGTAGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA

mRNA sequence

ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA

Coding sequence (CDS)

ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA

Protein sequence

MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGSGYDRFDRKEGIVCIFRWGFPGKNHRIFFRYLIKDIQSIGIELKEGIYTRRVLYLEIRGQGAIPFTRTDENLTPREMEQKAAELAYFLRVPIEVF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13669.1Spo13669.1mRNA


Homology
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|221222431|sp|Q9M3L7.2|ACCD_SPIOL (RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta (chloroplast) [Spinacia oleracea])

HSP 1 Score: 309.7 bits (792), Expect = 4.800e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 273 MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 332

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 333 GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 392

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 393 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 431

BLAST of Spo13669.1 vs. NCBI nr
Match: gi|11497537|ref|NP_054945.1| (acetyl-CoA carboxylase beta subunit [Spinacia oleracea])

HSP 1 Score: 309.7 bits (792), Expect = 4.800e-81
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 304 MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 363

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 364 GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 423

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 424 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 462

BLAST of Spo13669.1 vs. NCBI nr
Match: gi|910354326|ref|YP_009160811.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 300.4 bits (768), Expect = 2.900e-78
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 292 MDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 351

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NKF+PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 352 GSMGSVVGEKITRLIEYAANKFLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 411

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 412 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 450

BLAST of Spo13669.1 vs. NCBI nr
Match: gi|110456613|gb|ABG74740.1| (acetyl-CoA carboxylase beta subunit [Forsythia europaea])

HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS+DPIGFHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 291 MDEDMVSLDPIGFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 350

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NKF+PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQSNK
Sbjct: 351 GSMGSVVGEKITRLIEYATNKFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNK 410

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPN+YIAFAG
Sbjct: 411 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNSYIAFAG 449

BLAST of Spo13669.1 vs. NCBI nr
Match: gi|836642812|ref|YP_009143816.1| (acetyl-CoA carboxylase beta subunit (chloroplast) [Salicornia bigelovii])

HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 292 MDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 351

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NK +PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 352 GSMGSVVGEKITRLIEYAANKSLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 411

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 412 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 450

BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8E8_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon persicum GN=accD PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.000e-78
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 292 MDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 351

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NKF+PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 352 GSMGSVVGEKITRLIEYAANKFLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 411

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 412 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 450

BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K868_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon ammodendron GN=accD PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.000e-78
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVSMDPI FHSEEEAYKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 292 MDEDMVSMDPIEFHSEEEAYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 351

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NKF+PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 352 GSMGSVVGEKITRLIEYAANKFLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 411

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 412 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 450

BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QY59_SALBI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia bigelovii GN=accD PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 292 MDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 351

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NK +PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 352 GSMGSVVGEKITRLIEYAANKSLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 411

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 412 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 450

BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: Q06R56_9LAMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Forsythia europaea GN=accD PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77
Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS+DPIGFHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 291 MDEDMVSLDPIGFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 350

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NKF+PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQSNK
Sbjct: 351 GSMGSVVGEKITRLIEYATNKFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNK 410

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPN+YIAFAG
Sbjct: 411 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNSYIAFAG 449

BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXC4_SALEU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia europaea GN=accD PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77
Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS DPI FHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 319 MDEDMVSTDPIEFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 378

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+NK +PLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 379 GSMGSVVGEKITRLIEYAANKSLPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 438

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 439 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 477

BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_SPIOL (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Spinacia oleracea GN=accD PE=3 SV=2)

HSP 1 Score: 309.7 bits (792), Expect = 3.000e-83
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 273 MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 332

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK
Sbjct: 333 GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 392

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 393 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 431

BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_TOBAC (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tabacum GN=accD PE=1 SV=2)

HSP 1 Score: 289.7 bits (740), Expect = 3.200e-77
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 276 MDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 335

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+N+ +PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQ NK
Sbjct: 336 GSMGSVVGEKITRLIEYAANQILPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQLNK 395

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 396 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 434

BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_NICSY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana sylvestris GN=accD PE=3 SV=2)

HSP 1 Score: 289.7 bits (740), Expect = 3.200e-77
Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG
Sbjct: 276 MDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 335

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+N+ +PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQ NK
Sbjct: 336 GSMGSVVGEKITRLIEYAANQILPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQLNK 395

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 396 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 434

BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_CARPA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya GN=accD PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.200e-77
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD++MVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTG GQLNGIP+A+GVMDFQFMG
Sbjct: 280 MDENMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGTGQLNGIPIALGVMDFQFMG 339

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+N+F+PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQSNK
Sbjct: 340 GSMGSVVGEKITRLIEYATNEFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNK 399

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 400 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 438

BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_DAUCA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Daucus carota GN=accD PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.400e-77
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS+DPI FHSEEE YKDRIDSYQ KTGLTEAVQTGIGQLNGIP+A+GVMDFQFMG
Sbjct: 273 MDEDMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGIGQLNGIPIALGVMDFQFMG 332

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+N+ +PLIIVCASGGARMQEGSLSLMQMAKISS LYDYQSNK
Sbjct: 333 GSMGSVVGEKITRLIEYATNQLLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNK 392

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFYV ILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG
Sbjct: 393 KLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 431

BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta)

HSP 1 Score: 266.2 bits (679), Expect = 2.100e-71
Identity = 136/159 (85.53%), Postives = 149/159 (93.71%), Query Frame = 1

		  

Query: 1   MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMG 60
           MD+DMVS DPI FHS+EE YK+RIDS Q  TGLT+AVQTG GQLNGIPVA+GVMDF+FMG
Sbjct: 274 MDEDMVSADPIKFHSKEEPYKNRIDSAQKTTGLTDAVQTGTGQLNGIPVALGVMDFRFMG 333

Query: 61  GSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNK 120
           GSMGSVVGEKITRLIEYA+N+ +PLI+VC+SGGARMQEGSLSLMQMAKISSVL DYQS+K
Sbjct: 334 GSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSK 393

Query: 121 KLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG 160
           KLFY+SILTSPTTGGVTASFGMLGDIIIAEP AYIAFAG
Sbjct: 394 KLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAG 432

BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Match: ATCG00520.1 (unfolded protein binding)

HSP 1 Score: 161.8 bits (408), Expect = 5.700e-40
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 1

		  

Query: 159 GSGYDRFDRKEGIVCIFRWGFPGKNHRIFFRYLIKDIQSIGIELKEGIYTRRVLYLEIRG 218
           GSGYD FDRKEGIV IFRWGFPGK+ RIF R+ +KDIQSI IE+KEG+  RRVLY+EIRG
Sbjct: 89  GSGYDLFDRKEGIVRIFRWGFPGKSRRIFLRFFMKDIQSIRIEVKEGVSARRVLYMEIRG 148

Query: 219 QGAIPFTRTDENLTPREMEQKAAELAYFLRVPIEVF 255
           QGAIP  RTDEN T RE+EQKAAELAYFLRVPIEVF
Sbjct: 149 QGAIPLIRTDENFTTREIEQKAAELAYFLRVPIEVF 184

The following BLAST results are available for this feature:
BLAST of Spo13669.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|221222431|sp|Q9M3L7.2|ACCD_SPIOL4.8e-81100.RecName: Full=Acetyl-coenzyme ... [more]
gi|11497537|ref|NP_054945.1|4.8e-81100.acetyl-CoA carboxylase beta su... [more]
gi|910354326|ref|YP_009160811.1|2.9e-7896.8acetyl-CoA carboxylase carboxy... [more]
gi|110456613|gb|ABG74740.1|1.9e-7794.9acetyl-CoA carboxylase beta su... [more]
gi|836642812|ref|YP_009143816.1|1.9e-7796.2acetyl-CoA carboxylase beta su... [more]
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BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K0K8E8_9CARY2.0e-7896.8Acetyl-coenzyme A carboxylase ... [more]
A0A0K0K868_9CARY2.0e-7896.8Acetyl-coenzyme A carboxylase ... [more]
A0A0G2QY59_SALBI1.3e-7796.2Acetyl-coenzyme A carboxylase ... [more]
Q06R56_9LAMI1.3e-7794.9Acetyl-coenzyme A carboxylase ... [more]
A0A0G2QXC4_SALEU1.3e-7796.2Acetyl-coenzyme A carboxylase ... [more]
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BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ACCD_SPIOL3.0e-83100.Acetyl-coenzyme A carboxylase ... [more]
ACCD_TOBAC3.2e-7793.0Acetyl-coenzyme A carboxylase ... [more]
ACCD_NICSY3.2e-7793.0Acetyl-coenzyme A carboxylase ... [more]
ACCD_CARPA4.2e-7791.8Acetyl-coenzyme A carboxylase ... [more]
ACCD_DAUCA5.4e-7791.8Acetyl-coenzyme A carboxylase ... [more]
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BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
ATCG00500.12.1e-7185.5acetyl-CoA carboxylase carboxy... [more]
ATCG00520.15.7e-4080.2unfolded protein binding[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000022Carboxyl transferasePFAMPF01039Carboxyl_transcoord: 9..159
score: 5.7
IPR000438Acetyl-CoA carboxylase carboxyl transferase, beta subunitPRINTSPR01070ACCCTRFRASEBcoord: 128..145
score: 8.3E-33coord: 90..108
score: 8.3E-33coord: 56..70
score: 8.3
IPR003359Photosystem I Ycf4, assemblyPRODOMPD003698coord: 134..251
score: 2.0
IPR003359Photosystem I Ycf4, assemblyPFAMPF02392Ycf4coord: 155..252
score: 1.7
IPR011762Acetyl-coenzyme A carboxyltransferase, N-terminalPROFILEPS50980COA_CT_NTERcoord: 1..186
score: 19
NoneNo IPR availablePANTHERPTHR22855ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATEDcoord: 8..159
score: 3.2E
NoneNo IPR availablePANTHERPTHR22855:SF15ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTICcoord: 8..159
score: 3.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009058 biosynthetic process
cellular_component GO:0009317 acetyl-CoA carboxylase complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009579 thylakoid
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression