Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAAAAGAGTAATTGAACAAACATTGAATAAGACAGTACCTGAAGGTTCACAAGCAGCCGAATTTTTATTCCATAAGGGTTTATTTGATCCAATCGTACCGCGTAATCTTTTAAAAGGCGTTCTAAGCGAGTTATTTGAGCTGCATGCTTTTTTTCCTTTGAATCAAAATAAAGGCGAGGATTAAGATCAATTTTCTTATTTGTGTCAAAAAGTCTTTGTTTTTATTGGAATCTAAAGTAAAAACCAGAAGAAGAAGAATGGGGTTTTTTGTTGGCAACATCTTAAGTTTGTAATAAAAAAAGACTTCAAAAAAAATGTGAATAATTAGAAATTATTTTTTATATTTCCGATTCCTAATTAGGAAAACTCGATCAACAAGATAAAAGAACGACTTGTTCTTTTTCCTTCTGTGAAAATTAGTGAAATAAAAAATTTTTATGTTTCCTTATTACACTTACATATGGATAGAATTAAAAAAGAACTTTTTGTTTGGTCTGGGAATTTTTATTTAAAATATATTTTGGATCAGACTCTAACAACTCTTTTGGAAATTTCTAATAAACCTTATATTTTCTTGAATTAATAGAAGCAAAAGGACGAAAAAAAAACAGAAAGGAAAGTCAATCATATATTATATGTAGAAATCCAATTTCTTTTTTAGTTCTACATTTCTTGTACTTATTATATATACTTTCTTATAGAATTCTAATTAATTAATTAATATAATAACAACAAAAAAATATAACAAACAGGTACAATTACAATATCGTAAATTGAGGTACCCATTTTATAACAACTATGAACTTTCCCTCTATTTTTGTGCCTTTAGTAGGCCTTGTATTTCCGGCAATTGCAATGGCTTCTTTATTTCTTTATGTTAAAAAAAATAAGATTGTTTAGATTTTATGGTCCAAATTTCAAGACTTAGGCTTGAATCATAACACATATATCAATTTAGCGGAATGGTATACCACGCGATTTCTTTCGAACATAAATGAAAGAAAGAGCCCTTAATGCTTATGTATGTGATGTATATGGAAAGATGACGACATAGGGGTAGATTTTATTATTTTGATCGAACTAAATAAAAATAGAGTTAGATATTTAAATTTATAAATAAAAGTAAAAGTGAAACACATCCGACATCAGAATAGTACTAGTTGATGAGAGTTACATCGGAAACAAGGCAGAGTAAGGAAAGTCCAATTCATTTTGGGTATTCTTTCAATTCAAATTTAATGCAACCAGATCTAGTATGAATTGGCGATCAGAACGTATATGGGTAGAATTTATAACGGGATCTCGAAAAATAAGTAATTTCTGCTGGGCCTTTATACTTTTTTTAGGTTCATCAGGATTTTTATTGGTTGGAATTTCCAGCTAACTTGGTAAGAATTTTATATCTTTATTTCCCCCCAGCAAATTCTTTTTTTTCCACAAGGGCTGGTGATGTCTTTTTATGGGATTGCAGGCCTCTTTATTAGCGCCTACTTGTGGTGTGCAATTTCATGGAATGTAGGTNTCTTTCTATGGGATTGCAGGCCTCTTTATTAGCGCCTACTTGTGGTGTGCAATTTCATGGAATGTAGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA ATGGATGACGATATGGTCTCTATGGATCCTATCGGATTTCATTCGGAGGAGGAAGCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACGGGTTTAACTGAAGCTGTTCAAACCGGTATAGGTCAACTAAACGGTATTCCTGTAGCAATTGGGGTTATGGATTTTCAGTTTATGGGAGGTAGTATGGGATCTGTAGTAGGGGAAAAAATAACCCGGTTGATTGAGTATGCTTCCAATAAATTCATACCCCTTATTATAGTATGTGCTTCCGGAGGGGCACGTATGCAAGAAGGAAGCTTGAGCTTAATGCAAATGGCAAAAATCTCGTCTGTTTTATATGATTATCAATCAAATAAAAAGTTATTTTATGTATCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCCAGCTTTGGTATGTTGGGGGATATCATTATTGCCGAACCTAACGCCTACATTGCATTTGCGGGTAGTGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTCTGTATTTTTCGTTGGGGATTCCCTGGAAAAAATCATCGCATCTTCTTCCGATATCTTATAAAAGATATTCAGTCTATTGGAATAGAACTTAAAGAGGGTATTTATACTCGTCGTGTCCTTTATCTGGAAATCAGAGGTCAAGGAGCCATTCCTTTTACTCGTACTGATGAGAATTTGACTCCACGAGAAATGGAACAAAAAGCGGCTGAATTGGCCTATTTCTTGCGTGTACCAATTGAAGTATTTTGA MDDDMVSMDPIGFHSEEEAYKDRIDSYQIKTGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYASNKFIPLIIVCASGGARMQEGSLSLMQMAKISSVLYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGSGYDRFDRKEGIVCIFRWGFPGKNHRIFFRYLIKDIQSIGIELKEGIYTRRVLYLEIRGQGAIPFTRTDENLTPREMEQKAAELAYFLRVPIEVF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|221222431|sp|Q9M3L7.2|ACCD_SPIOL (RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta (chloroplast) [Spinacia oleracea]) HSP 1 Score: 309.7 bits (792), Expect = 4.800e-81 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|11497537|ref|NP_054945.1| (acetyl-CoA carboxylase beta subunit [Spinacia oleracea]) HSP 1 Score: 309.7 bits (792), Expect = 4.800e-81 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|910354326|ref|YP_009160811.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Haloxylon ammodendron]) HSP 1 Score: 300.4 bits (768), Expect = 2.900e-78 Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|110456613|gb|ABG74740.1| (acetyl-CoA carboxylase beta subunit [Forsythia europaea]) HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77 Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1
BLAST of Spo13669.1 vs. NCBI nr
Match: gi|836642812|ref|YP_009143816.1| (acetyl-CoA carboxylase beta subunit (chloroplast) [Salicornia bigelovii]) HSP 1 Score: 297.7 bits (761), Expect = 1.900e-77 Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8E8_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon persicum GN=accD PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.000e-78 Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K868_9CARY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Haloxylon ammodendron GN=accD PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.000e-78 Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QY59_SALBI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia bigelovii GN=accD PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77 Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: Q06R56_9LAMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Forsythia europaea GN=accD PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77 Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXC4_SALEU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Salicornia europaea GN=accD PE=3 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 1.300e-77 Identity = 153/159 (96.23%), Postives = 156/159 (98.11%), Query Frame = 1
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_SPIOL (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Spinacia oleracea GN=accD PE=3 SV=2) HSP 1 Score: 309.7 bits (792), Expect = 3.000e-83 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_TOBAC (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tabacum GN=accD PE=1 SV=2) HSP 1 Score: 289.7 bits (740), Expect = 3.200e-77 Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 1
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_NICSY (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana sylvestris GN=accD PE=3 SV=2) HSP 1 Score: 289.7 bits (740), Expect = 3.200e-77 Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 1
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_CARPA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya GN=accD PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.200e-77 Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 1
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Match: ACCD_DAUCA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Daucus carota GN=accD PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 5.400e-77 Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1
BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta) HSP 1 Score: 266.2 bits (679), Expect = 2.100e-71 Identity = 136/159 (85.53%), Postives = 149/159 (93.71%), Query Frame = 1
BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Match: ATCG00520.1 (unfolded protein binding) HSP 1 Score: 161.8 bits (408), Expect = 5.700e-40 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13669.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13669.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13669.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13669.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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