Spo13700 (gene) | SpinachBase

Overview


Name	Spo13700
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Wiskott-Aldrich syndrome protein family member 2
Location	SpoScf_00277 : 306577 .. 308173 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGTAAGTAGCCAACCATTGTTTGACAAGTGGGCATATATCAGCATCAGATAACCAATCCTTTGCCCATCACAATTTTTGTTTACATGTCTAAACATATGCCATCAACAAATCCTTTCCCCCTTGTGATTTTCAGCCAAACAAGGAACTAAATTGAAAGCTAAATACCCTGAAAAATCTTAGTGAAAACTACATCAGCAGCACAGGCAGAAATGGAAGCCTCAGCTGCACTGAGCAATAGAGGAATTCCTGGTGTAAAGTACCAATGTTTTCCTACTTGTACACGCAGTTTCACTGGAAGAAGAGCAATGCAGGTTGTATGTATGGCCTCTAAGAAGTTCAAATCATCGTCCTTCACCAAAACTACTGGCTCCAAGAAGGTATTATTGTATTGCCTCCGTTTGAATTTAGTTGTCGCATTACTGGTTCAAATTACGTTTTCAACGTGATAGTATTTTGCTACTGCATACTTGTCTACATTTCTGATGTTATGATGAGTTCTTGAATATCCTGAAAAAGTAACATCTAAATAAGATGGTCTATCATTAGTTGAGACGGCCTAAAATTGAAATATAGTCAATTATTTATGAACAGACAGATGTATACAATGAGCTCTTTACCAAACTGAAGAATCCAGGAAGTTTTGTTCTGTACTTCTGTTGGTTAAGATCATTAGTTCAATACCATGAAATTATGCACAGTATTTTAGGAACCTTTGAAATACTGAATATAATGATAAATGTTCTGTTGTAAACTGTAAATTTGGAATTTGTTGGAGGGGATTAAGGTCATAATCATGTAATGTAACACTGGTTCTCAAATATGAATGCAGGGTTCGCCGGTGAAGCTGCTGACGAGGGTGGAGCAGCTGAGACTGCTGACAAAAGCCGAGAAAGCAGGGTTGCTTTCAGCAGCAGAAAAGGCAGGGTTTTCATTAAAATCAATAGAGGAACAAGGTCTGCTGACAAAAGCTGAAGAGTTGGGTTTATTATCAGCAGCAACAAACCCAGAAACTCCATCAACCCTCTTTACACTTAGCCTTGGGCTATTACTTCTTGGCCCTGCTTTTGTTTTTCTGGTACCTGAGGATAACACCTGGGAAATTGCTATCCAGGTTTCTGTTGCACTTCTTAGTATTGTTGGAGGATCTGCAGCTTTCGCTGCTTCCAATCTTATAGGAAACCTGCAGAAAGCCGAATAATTTTTGCTGTAGAAATAATATATAGTCTTTATTTGCGTATTTTTGTAACGCGTTGGATCAATGCTCACTGTTTTTCGGATCAATGCTTACTGCTTTTCGAAACTCGACATAAGCTCGTAGAATCATAGCCATACTCTAGCACAATGAGGCTTAAAACATCCAAATAGCAAGAAAGTTCAAATACACCTTGTAGTATATTTTTAGAAGTGAAATGTCATTCCATAAAAAAAAAATGAATTACTAGAATACTTTTTTGAAAAGGAAAGGGGAAAAATGGTGTATTATTATTGGGAAATAATGAAAATCCTAAATAATAATTAAAAAAAAAAGGAAACCAAAAATAAAAACATAAAAGCCGCAATCGAGAGGATTAAGTATACTGTGGTGCCTAAAGCC

mRNA sequence

GATGTAAGTAGCCAACCATTGTTTGACAAGTGGGCATATATCAGCATCAGATAACCAATCCTTTGCCCATCACAATTTTTGTTTACATGTCTAAACATATGCCATCAACAAATCCTTTCCCCCTTGTGATTTTCAGCCAAACAAGGAACTAAATTGAAAGCTAAATACCCTGAAAAATCTTAGTGAAAACTACATCAGCAGCACAGGCAGAAATGGAAGCCTCAGCTGCACTGAGCAATAGAGGAATTCCTGGTGTAAAGTACCAATGTTTTCCTACTTGTACACGCAGTTTCACTGGAAGAAGAGCAATGCAGGTTGTATGTATGGCCTCTAAGAAGTTCAAATCATCGTCCTTCACCAAAACTACTGGCTCCAAGAAGGGTTCGCCGGTGAAGCTGCTGACGAGGGTGGAGCAGCTGAGACTGCTGACAAAAGCCGAGAAAGCAGGGTTGCTTTCAGCAGCAGAAAAGGCAGGGTTTTCATTAAAATCAATAGAGGAACAAGGTCTGCTGACAAAAGCTGAAGAGTTGGGTTTATTATCAGCAGCAACAAACCCAGAAACTCCATCAACCCTCTTTACACTTAGCCTTGGGCTATTACTTCTTGGCCCTGCTTTTGTTTTTCTGGTACCTGAGGATAACACCTGGGAAATTGCTATCCAGGTTTCTGTTGCACTTCTTAGTATTGTTGGAGGATCTGCAGCTTTCGCTGCTTCCAATCTTATAGGAAACCTGCAGAAAGCCGAATAATTTTTGCTGTAGAAATAATATATAGTCTTTATTTGCGTATTTTTGTAACGCGTTGGATCAATGCTCACTGTTTTTCGGATCAATGCTTACTGCTTTTCGAAACTCGACATAAGCTCGTAGAATCATAGCCATACTCTAGCACAATGAGGCTTAAAACATCCAAATAGCAAGAAAGTTCAAATACACCTTGTAGTATATTTTTAGAAGTGAAATGTCATTCCATAAAAAAAAAATGAATTACTAGAATACTTTTTTGAAAAGGAAAGGGGAAAAATGGTGTATTATTATTGGGAAATAATGAAAATCCTAAATAATAATTAAAAAAAAAAGGAAACCAAAAATAAAAACATAAAAGCCGCAATCGAGAGGATTAAGTATACTGTGGTGCCTAAAGCC

Coding sequence (CDS)

ATGGAAGCCTCAGCTGCACTGAGCAATAGAGGAATTCCTGGTGTAAAGTACCAATGTTTTCCTACTTGTACACGCAGTTTCACTGGAAGAAGAGCAATGCAGGTTGTATGTATGGCCTCTAAGAAGTTCAAATCATCGTCCTTCACCAAAACTACTGGCTCCAAGAAGGGTTCGCCGGTGAAGCTGCTGACGAGGGTGGAGCAGCTGAGACTGCTGACAAAAGCCGAGAAAGCAGGGTTGCTTTCAGCAGCAGAAAAGGCAGGGTTTTCATTAAAATCAATAGAGGAACAAGGTCTGCTGACAAAAGCTGAAGAGTTGGGTTTATTATCAGCAGCAACAAACCCAGAAACTCCATCAACCCTCTTTACACTTAGCCTTGGGCTATTACTTCTTGGCCCTGCTTTTGTTTTTCTGGTACCTGAGGATAACACCTGGGAAATTGCTATCCAGGTTTCTGTTGCACTTCTTAGTATTGTTGGAGGATCTGCAGCTTTCGCTGCTTCCAATCTTATAGGAAACCTGCAGAAAGCCGAATAA

Protein sequence

MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPVKLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13700.1	Spo13700.1	mRNA

Homology

[Close]

BLAST of Spo13700.1 vs. NCBI nr
Match: gi|902230680|gb|KNA21949.1| (hypothetical protein SOVF_038190 [Spinacia oleracea])

HSP 1 Score: 330.9 bits (847), Expect = 1.400e-87
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  
Query: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV 60
           MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV
Sbjct: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV 60

Query: 61  KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST 120
           KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST
Sbjct: 61  KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST 120

Query: 121 LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE
Sbjct: 121 LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE 178

[Close]

BLAST of Spo13700.1 vs. NCBI nr
Match: gi|731366738|ref|XP_010695232.1| (PREDICTED: uncharacterized protein LOC104907905 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 248.1 bits (632), Expect = 1.200e-62
Identity = 141/195 (72.31%), Postives = 157/195 (80.51%), Query Frame = 1

		  
Query: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSP- 60
           MEASAA+S+RGI  VKYQCF TC   F GRR++Q++ MASKK  SSS TKT GSKKG+  
Sbjct: 1   MEASAAVSSRGISVVKYQCFSTCAFKFNGRRSLQIISMASKKSNSSSATKTVGSKKGTAV 60

Query: 61  ------------------VKLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLT 120
                             VKLLTRVEQLRLLTKAEKAGLLSAAEKAG SL +IE+ GLL+
Sbjct: 61  FPVGEPGPRNSTQSGTTSVKLLTRVEQLRLLTKAEKAGLLSAAEKAGLSLTTIEQLGLLS 120

Query: 121 KAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGG 177
           KAEELG+LSAATNPETPSTL TLSLGLLLLGPAFVFLVPEDN+ E+A+QV VALLS+VGG
Sbjct: 121 KAEELGVLSAATNPETPSTLLTLSLGLLLLGPAFVFLVPEDNSVEVAVQVLVALLSVVGG 180

[Close]

BLAST of Spo13700.1 vs. NCBI nr
Match: gi|17978981|gb|AAL47451.1| (AT5g08050/F13G24_250 [Arabidopsis thaliana])

HSP 1 Score: 184.5 bits (467), Expect = 1.600e-43
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK   S+ T+T  SKK +    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLTVHSMANKKPSPSAATRTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP F ++VPED TWE+ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           IQV VALLS++GGSAAFAAS  + NLQK++
Sbjct: 129 IQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Spo13700.1 vs. NCBI nr
Match: gi|15241507|ref|NP_196422.1| (uncharacterized protein [Arabidopsis thaliana])

HSP 1 Score: 184.5 bits (467), Expect = 1.600e-43
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK   S+ T+T  SKK +    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLTVHSMANKKPSPSAATRTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP F ++VPED TWE+ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           IQV VALLS++GGSAAFAAS  + NLQK++
Sbjct: 129 IQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Spo13700.1 vs. NCBI nr
Match: gi|685280243|ref|XP_009131028.1| (PREDICTED: uncharacterized protein LOC103855755 [Brassica rapa])

HSP 1 Score: 182.2 bits (461), Expect = 8.000e-43
Identity = 103/150 (68.67%), Postives = 124/150 (82.67%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK  S S T+T  SKKG+    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLSVHSMANKK-PSPSATRTITSKKGTTSGQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP FV+LVPED +W++ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFVYLVPEDYSWQVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           +Q+ VAL+S++GGSAAFAAS  + NLQK++
Sbjct: 129 VQLVVALVSVLGGSAAFAASGFVSNLQKSD 157

[Close]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSQ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038190 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 9.800e-88
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  
Query: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV 60
           MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV
Sbjct: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSPV 60

Query: 61  KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST 120
           KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST
Sbjct: 61  KLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATNPETPST 120

Query: 121 LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE
Sbjct: 121 LFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKAE 178

[Close]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA28_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g123680 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.300e-63
Identity = 141/195 (72.31%), Postives = 157/195 (80.51%), Query Frame = 1

		  
Query: 1   MEASAALSNRGIPGVKYQCFPTCTRSFTGRRAMQVVCMASKKFKSSSFTKTTGSKKGSP- 60
           MEASAA+S+RGI  VKYQCF TC   F GRR++Q++ MASKK  SSS TKT GSKKG+  
Sbjct: 1   MEASAAVSSRGISVVKYQCFSTCAFKFNGRRSLQIISMASKKSNSSSATKTVGSKKGTAV 60

Query: 61  ------------------VKLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLT 120
                             VKLLTRVEQLRLLTKAEKAGLLSAAEKAG SL +IE+ GLL+
Sbjct: 61  FPVGEPGPRNSTQSGTTSVKLLTRVEQLRLLTKAEKAGLLSAAEKAGLSLTTIEQLGLLS 120

Query: 121 KAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGG 177
           KAEELG+LSAATNPETPSTL TLSLGLLLLGPAFVFLVPEDN+ E+A+QV VALLS+VGG
Sbjct: 121 KAEELGVLSAATNPETPSTLLTLSLGLLLLGPAFVFLVPEDNSVEVAVQVLVALLSVVGG 180

[Close]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Match: Q9SD79_ARATH (Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana GN=F13G24.250 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.100e-43
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK   S+ T+T  SKK +    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLTVHSMANKKPSPSAATRTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP F ++VPED TWE+ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           IQV VALLS++GGSAAFAAS  + NLQK++
Sbjct: 129 IQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Match: Q8VYV1_ARATH (AT5g08050/F13G24_250 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.100e-43
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK   S+ T+T  SKK +    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLTVHSMANKKPSPSAATRTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP F ++VPED TWE+ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           IQV VALLS++GGSAAFAAS  + NLQK++
Sbjct: 129 IQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Match: M4CP26_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.600e-43
Identity = 103/150 (68.67%), Postives = 124/150 (82.67%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK  S S T+T  SKKG+    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLSVHSMANKK-PSPSATRTITSKKGTTSGQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP FV+LVPED +W++ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFVYLVPEDYSWQVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           +Q+ VAL+S++GGSAAFAAS  + NLQK++
Sbjct: 129 VQLVVALVSVLGGSAAFAASGFVSNLQKSD 157

[Close]

BLAST of Spo13700.1 vs. TAIR (Arabidopsis)
Match: AT5G08050.1 (Protein of unknown function (DUF1118))

HSP 1 Score: 184.5 bits (467), Expect = 5.700e-47
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 1

		  
Query: 32  AMQVVCMASKKFKSSSFTKTTGSKKGSP---VKLLTRVEQLRLLTKAEKAGLLSAAEKAG 91
           ++ V  MA+KK   S+ T+T  SKK +    VKLLTRVEQL+LLTKAEKAGLLS AEK+G
Sbjct: 9   SLTVHSMANKKPSPSAATRTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSG 68

Query: 92  FSLKSIEEQGLLTKAEELGLLSAATNPETPSTLFTLSLGLLLLGPAFVFLVPEDNTWEIA 151
           FSL +IE  GLLTKAEE G+LSAATNPETP TLFTLSLGLLLLGP F ++VPED TWE+ 
Sbjct: 69  FSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVV 128

Query: 152 IQVSVALLSIVGGSAAFAASNLIGNLQKAE 179
           IQV VALLS++GGSAAFAAS  + NLQK++
Sbjct: 129 IQVLVALLSVLGGSAAFAASGFVSNLQKSD 158

[Close]

BLAST of Spo13700.1 vs. TAIR (Arabidopsis)
Match: AT1G74730.1 (Protein of unknown function (DUF1118))

HSP 1 Score: 57.4 bits (137), Expect = 1.100e-8
Identity = 40/121 (33.06%), Postives = 68/121 (56.20%), Query Frame = 1

		  
Query: 60  VKLLTRVEQLRLLTKAEKAGLLSAAEKAGFSLKSIEEQGLLTKAEELGLLSAATN--PET 119
           V +  ++E+ ++L+  EK+GLLS AE  G +L S+E+  + +KAE+LGLLS   N    +
Sbjct: 78  VDVFKKLEKRKVLSNVEKSGLLSKAEGLGLTLSSLEKLKVFSKAEDLGLLSLLENLAGTS 137

Query: 120 PSTLFTLSLGLLLLGPAFVFLVPEDNTWEIAIQVSVALLSIVGGSAAFAASNLIGNLQKA 179
           P+ L + +L  L      V L+P+D+T  +  Q  +A    + G      S ++  LQ+A
Sbjct: 138 PAVLASAALPALTAAIVAVVLIPDDSTTLVVAQAVLAGALALTGVVLLVGSVVLDGLQEA 197

The following BLAST results are available for this feature:

BLAST of Spo13700.1 vs. NCBI nr
BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
BLAST of Spo13700.1 vs. ExPASy Swiss-Prot
BLAST of Spo13700.1 vs. TAIR (Arabidopsis)

BLAST of Spo13700.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902230680\|gb\|KNA21949.1\|	1.4e-87	100.	hypothetical protein SOVF_0381...	[more]
gi\|731366738\|ref\|XP_010695232.1\|	1.2e-62	72.3	PREDICTED: uncharacterized pro...	[more]
gi\|17978981\|gb\|AAL47451.1\|	1.6e-43	69.3	AT5g08050/F13G24_250 [Arabidop...	[more]
gi\|15241507\|ref\|NP_196422.1\|	1.6e-43	69.3	uncharacterized protein [Arabi...	[more]
gi\|685280243\|ref\|XP_009131028.1\|	8.0e-43	68.6	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13700.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RSQ7_SPIOL	9.8e-88	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BA28_BETVU	8.3e-63	72.3	Uncharacterized protein OS=Bet...	[more]
Q9SD79_ARATH	1.1e-43	69.3	Putative uncharacterized prote...	[more]
Q8VYV1_ARATH	1.1e-43	69.3	AT5g08050/F13G24_250 OS=Arabid...	[more]
M4CP26_BRARP	5.6e-43	68.6	Uncharacterized protein OS=Bra...	[more]

BLAST of Spo13700.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo13700.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G08050.1	5.7e-47	69.3	Protein of unknown function (D...	[more]
AT1G74730.1	1.1e-8	33.0	Protein of unknown function (D...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009500	Protein of unknown function DUF1118	PFAM	PF06549	DUF1118	coord: 65..177 score: 2.4
None	No IPR available	PANTHER	PTHR31425	FAMILY NOT NAMED	coord: 59..178 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009416	response to light stimulus
biological_process	GO:1901401	regulation of tetrapyrrole metabolic process
biological_process	GO:0019216	regulation of lipid metabolic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0031408	oxylipin biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006826	iron ion transport
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0080167	response to karrikin
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0015994	chlorophyll metabolic process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0048529	magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
molecular_function	GO:0046914	transition metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo20441	0.83	Barchart \| Table
Spo10927	0.76	Barchart \| Table
Spo23917	0.76	Barchart \| Table
Spo24380	0.73	Barchart \| Table
Spo14852	0.70	Barchart \| Table
Spo25118	0.70	Barchart \| Table
Spo21021	0.70	Barchart \| Table
Spo10373	0.69	Barchart \| Table
Spo10238	0.69	Barchart \| Table
Spo05339	0.69	Barchart \| Table
Spo25138	0.68	Barchart \| Table
Spo09107	0.68	Barchart \| Table
Spo06031	0.67	Barchart \| Table
Spo20781	0.66	Barchart \| Table
Spo17860	0.66	Barchart \| Table