Spo13789 (gene) | SpinachBase

Overview


Name	Spo13789
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Rer1 protein, putative
Location	SpoScf_02787 : 781 .. 3252 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTCTGTTCCCTTTCTCCTTCCTTCTATTTTTAATTTGGTTTTTAAATCTTTCTTTAAGAAAGTTGTATGTAATGCGTAGTATTTGACTGGAGCTCAGTTTAAAATCAAAGTTGGGTGATTTAGTATAAAGGGTAGTCAACAATTTTTATTTGGGGGGTTATAGTATGCTGCAATATATGCATTCATGAGTATAATTTGGTGAATTTTTTTCTTCTTTTTTCATTGGTTATAATGATAATTTCAGCATGATTTGTGATTTTACTTAAATAATGTTTGGTGATGCTGATCTGAGATCTTGTAGTACAATTAGGGTTGTTTTCCAGGGTTGATTTGTGTTTGGAATTAAATTAAAATTTGGGGTTTTTTGTATAATTGTGATGGGGTTTCGTCTGATTGGAAATCTTGTGTAGTATGATTAGTGTTAGGATATAGCATACTAGCATGACATGTTAATGCTGTGGATGCTCTTTTTATGTACTTATGTCTAAATGTGCTAATTACATGGTGAATGCCTGAACCTGAATTTTGGAACGGGGAGTGTGCGGTGTGATTAGTGTTGGGATGTAGCATACAAGCATGAATGTCAATGCTTATTGTCTAGTACAATTGCTTCTTAGGATTTTACTCTGTGTTTTTGTCAAAATGGTAGTTGCAAGAGTGGGAGAACAAGGCTTTGTAAGAAAGTGATTATCACCTTGCTAGTTAGTTAATGAATGACATATAGCTGAGGTTTGACTTCATAGATGAGCCAGTCGTTTGGTTGAGATTTAATGTGTGACTGAGAAGCTGTTGGTGATAAAACAGGTCATAATGGTTACTTGTACCAGGTTATGGTTAATTTTAGTAGGCATGTTTAATCCTATTTTTTCATTTCTCTGAAGTAATGCAAGTTATATCTACCCATAGACGTGATGAGGAGGGAGGGAGGGAGGGAAGGAGGTGTTATAGTTCAGGAGGGAAAGAGGGTGGGGAATATCTAAGATGTTATACAGTGTCTTTAGTGTCTTGGAGGATACGATGTTAATTAGAAATATGATAATTAAGGTTACTTGGTTTGGAAGACGCAAGGAGAAGCATAGAAGAAACTCTGGAATTCAAATAGACTGCAGGCTGGCTACAGAGCTCAATCGTGTCGCTACGTTGTTTTATAGATCTTTTTTCTGAGACCTATAGGCAATAAGTTTTATACCTTCTTTTGTAGTGAACAGAAGCTACAAAGGATATGGCATGTTGTTGGACTTGTGGTCCGTTGATTCCGGGTTCCTTTTGGTTGATCTTTGACTCACTCCATAGGCTTCAATCCAACAAATTATTATAAAAATTTCTTGCCAATTTAAAAGAAAGAAAGAAATGATAAATAAATATTTGGGATTAAGGCCTTTTAGTTGAACTAGGTATGGTTATCGTCTTATCGTTAATCTTGTTAGATCTGAGATTTTCTCTTACCATGCAATACATTTGGCTCCTCCCAAGGTTGGGTGGGGGAGGTTTGCCAGATGTGTACAGTCTTATCCTCCCTTCCAGTTCCTTGCAACTGCAAAAGAGGCTCTTTAGTGTTACCCCTACCCTAGTTTTCCATATGCGAGGGTCATGTATAAAAGACTAGTTGAAGATACATATCTATTGTGGAGTAAATATAGTAGAGACTTGATGCAGAAATGAAGTATTGTTACTCAAAAGAATGCTGTATAAAGTTTGTATTCACTTAATAATTGAATCTCCCTTATGTGAAGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

mRNA sequence

TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Coding sequence (CDS)

ATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Protein sequence

MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKKVC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo13789.1	Spo13789.1	mRNA

Homology

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239102|gb|KNA25446.1| (hypothetical protein SOVF_006120 isoform B [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239101|gb|KNA25445.1| (hypothetical protein SOVF_006120 isoform A [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|731336954|ref|XP_010679533.1| (PREDICTED: protein RER1A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 339.0 bits (868), Expect = 5.500e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1

		  
Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|225438813|ref|XP_002283333.1| (PREDICTED: protein RER1A [Vitis vinifera])

HSP 1 Score: 293.5 bits (750), Expect = 2.600e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1

		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|976899289|gb|KVH87874.1| (hypothetical protein Ccrd_024806 [Cynara cardunculus var. scolymus])

HSP 1 Score: 285.8 bits (730), Expect = 5.500e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1

		  
Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S118_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S119_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7R9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127360 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.800e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1

		  
Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: D7SVS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00030 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.800e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1

		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A103XBW6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024806 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.800e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1

		  
Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.200e-66
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.400e-61
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1

		  
Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 4.100e-61
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1

		  
Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 2.100e-49
Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1

		  
Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTPH   RW+    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPT+ ++EFRPF+RRLPEFKFW++ TK   +A V 
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.700e-49
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 1

		  
Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTP+   RWI    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPTR ++EFRPF+RRLPEFKFW+S TK   +A   
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMAC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT4G39220.1 (Rer1 family protein)

HSP 1 Score: 251.5 bits (641), Expect = 4.000e-67
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1

		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G23310.1 (Rer1 family protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.300e-62
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1

		  
Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-62
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1

		  
Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G18240.1 (Rer1 family protein)

HSP 1 Score: 194.9 bits (494), Expect = 4.500e-50
Identity = 104/187 (55.61%), Postives = 132/187 (70.59%), Query Frame = 1

		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME   GS    +T+     AS  ++W    S+ FQ++LD+S P++  RW+   V A+ Y 
Sbjct: 1   MEDEPGSENEADTI----VASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
            RVY V G++++SYGL  YILNLLI FLSP+VDPE++ L D  +LP   SDE++PFVRRL
Sbjct: 61  YRVYSVYGYFVISYGLATYILNLLIGFLSPKVDPELEAL-DPDSLPVDESDEYKPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWY+ TKAF +AFVMTF S  DVPVFWPILL YW+VL++LTM+R I HM KYRY P
Sbjct: 121 PEFKFWYAATKAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 180

Query: 182 FSFGKKV 189
           F   K V
Sbjct: 181 FDVRKPV 182

The following BLAST results are available for this feature:

BLAST of Spo13789.1 vs. NCBI nr
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)

BLAST of Spo13789.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902239102\|gb\|KNA25446.1\|	4.0e-101	100.	hypothetical protein SOVF_0061...	[more]
gi\|902239101\|gb\|KNA25445.1\|	4.0e-101	100.	hypothetical protein SOVF_0061...	[more]
gi\|731336954\|ref\|XP_010679533.1\|	5.5e-90	88.9	PREDICTED: protein RER1A-like ...	[more]
gi\|225438813\|ref\|XP_002283333.1\|	2.6e-76	77.9	PREDICTED: protein RER1A [Viti...	[more]
gi\|976899289\|gb\|KVH87874.1\|	5.5e-74	78.2	hypothetical protein Ccrd_0248...	[more]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9S118_SPIOL	2.8e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9S119_SPIOL	2.8e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C7R9_BETVU	3.8e-90	88.9	Uncharacterized protein OS=Bet...	[more]
D7SVS2_VITVI	1.8e-76	77.9	Putative uncharacterized prote...	[more]
A0A103XBW6_CYNCS	3.8e-74	78.2	Uncharacterized protein OS=Cyn...	[more]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RER1A_ARATH	7.2e-66	66.3	Protein RER1A OS=Arabidopsis t...	[more]
RER1C_ARATH	2.4e-61	66.2	Protein RER1C OS=Arabidopsis t...	[more]
RER1B_ARATH	4.1e-61	65.7	Protein RER1B OS=Arabidopsis t...	[more]
RER1_BOVIN	2.1e-49	57.4	Protein RER1 OS=Bos taurus GN=...	[more]
RER1_CHICK	4.7e-49	58.0	Protein RER1 OS=Gallus gallus ...	[more]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G39220.1	4.0e-67	66.3	Rer1 family protein	[more]
AT2G23310.1	1.3e-62	66.2	Rer1 family protein	[more]
AT2G21600.1	2.3e-62	65.7	endoplasmatic reticulum retrie...	[more]
AT2G18240.1	4.5e-50	55.6	Rer1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PIR	PIRSF016013	AtER_Rer1p	coord: 13..189 score: 5.2
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..187 score: 6.0E
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 31..187 score: 1.1
None	No IPR available	PANTHER	PTHR10743:SF1	PROTEIN RER1C	coord: 1..187 score: 6.0E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045185	maintenance of protein location
biological_process	GO:0035246	peptidyl-arginine N-methylation
biological_process	GO:0070933	histone H4 deacetylation
biological_process	GO:0061647	histone H3-K9 modification
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0006810	transport
biological_process	GO:0033043	regulation of organelle organization
biological_process	GO:0006996	organelle organization
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0022402	cell cycle process
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0035194	posttranscriptional gene silencing by RNA
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0032502	developmental process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0007049	cell cycle
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0009845	seed germination
biological_process	GO:0006310	DNA recombination
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0048575	short-day photoperiodism, flowering
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0051301	cell division
biological_process	GO:0050826	response to freezing
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0010072	primary shoot apical meristem specification
biological_process	GO:0010100	negative regulation of photomorphogenesis
biological_process	GO:0019915	lipid storage
biological_process	GO:0009880	embryonic pattern specification
biological_process	GO:0006281	DNA repair
biological_process	GO:0048825	cotyledon development
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0051604	protein maturation
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0006396	RNA processing
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0032204	regulation of telomere maintenance
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0010638	positive regulation of organelle organization
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0009888	tissue development
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0043247	telomere maintenance in response to DNA damage
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0080119	ER body organization
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0008284	positive regulation of cell proliferation
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006508	proteolysis
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0045281	succinate dehydrogenase complex
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0033116	endoplasmic reticulum-Golgi intermediate compartment membrane
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0031011	Ino80 complex
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0009536	plastid
cellular_component	GO:0000118	histone deacetylase complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046969	NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function	GO:0004806	triglyceride lipase activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0017069	snRNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function	GO:0097372	NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0016274	protein-arginine N-methyltransferase activity
molecular_function	GO:0030731	guanidinoacetate N-methyltransferase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046970	NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0003735	structural constituent of ribosome

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13487	0.82	Barchart \| Table
Spo24213	0.82	Barchart \| Table
Spo15092	0.79	Barchart \| Table
Spo11682	0.79	Barchart \| Table
Spo05415	0.78	Barchart \| Table
Spo25507	0.78	Barchart \| Table
Spo20235	0.77	Barchart \| Table
Spo18143	0.77	Barchart \| Table
Spo23067	0.76	Barchart \| Table
Spo10211	0.76	Barchart \| Table
Spo26205	0.75	Barchart \| Table
Spo00444	0.75	Barchart \| Table
Spo26206	0.75	Barchart \| Table
Spo01403	0.75	Barchart \| Table
Spo06277	0.75	Barchart \| Table
Spo02609	0.75	Barchart \| Table
Spo24064	0.74	Barchart \| Table
Spo08198	0.74	Barchart \| Table
Spo16378	0.73	Barchart \| Table
Spo01183	0.73	Barchart \| Table
Spo25661	0.73	Barchart \| Table
Spo06497	0.72	Barchart \| Table
Spo22936	0.72	Barchart \| Table
Spo06711	0.72	Barchart \| Table
Spo07593	0.72	Barchart \| Table
Spo05090	0.72	Barchart \| Table
Spo13877	0.72	Barchart \| Table
Spo25346	0.71	Barchart \| Table
Spo05250	0.71	Barchart \| Table
Spo25779	0.71	Barchart \| Table
Spo10450	0.71	Barchart \| Table
Spo24203	0.71	Barchart \| Table
Spo23298	0.71	Barchart \| Table
Spo23092	0.71	Barchart \| Table
Spo16894	0.71	Barchart \| Table
Spo06717	0.70	Barchart \| Table
Spo01128	0.70	Barchart \| Table
Spo24416	0.70	Barchart \| Table
Spo03904	0.70	Barchart \| Table
Spo17039	0.70	Barchart \| Table
Spo17762	0.70	Barchart \| Table
Spo00908	0.70	Barchart \| Table
Spo22505	0.69	Barchart \| Table
Spo18784	0.69	Barchart \| Table
Spo19658	0.69	Barchart \| Table
Spo04371	0.69	Barchart \| Table
Spo02389	0.69	Barchart \| Table
Spo26726	0.69	Barchart \| Table
Spo09495	0.69	Barchart \| Table
Spo09855	0.69	Barchart \| Table
Spo06380	0.68	Barchart \| Table
Spo03008	0.68	Barchart \| Table
Spo04409	0.68	Barchart \| Table
Spo07916	0.68	Barchart \| Table
Spo24190	0.68	Barchart \| Table
Spo24225	0.68	Barchart \| Table
Spo22939	0.67	Barchart \| Table
Spo15898	0.67	Barchart \| Table
Spo01744	0.67	Barchart \| Table
Spo19290	0.67	Barchart \| Table
Spo12918	0.67	Barchart \| Table
Spo24916	0.67	Barchart \| Table
Spo17984	0.67	Barchart \| Table
Spo24937	0.67	Barchart \| Table
Spo06944	0.67	Barchart \| Table
Spo02208	0.67	Barchart \| Table
Spo21243	0.67	Barchart \| Table
Spo24874	0.66	Barchart \| Table
Spo24936	0.66	Barchart \| Table
Spo06097	0.66	Barchart \| Table
Spo19231	0.66	Barchart \| Table
Spo17471	0.66	Barchart \| Table
Spo20309	0.66	Barchart \| Table
Spo16694	0.66	Barchart \| Table
Spo15994	0.66	Barchart \| Table
Spo14378	0.66	Barchart \| Table
Spo12699	0.66	Barchart \| Table
Spo02105	0.66	Barchart \| Table
Spo11643	0.66	Barchart \| Table
Spo09307	0.66	Barchart \| Table
Spo07821	0.66	Barchart \| Table
Spo05761	0.65	Barchart \| Table
Spo06571	0.65	Barchart \| Table
Spo18220	0.65	Barchart \| Table
Spo22337	0.65	Barchart \| Table