Spo13875 (gene)

Overview
NameSpo13875
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 49856932 .. 49857917 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCAGAATTTTCCATTGCTCTTCGATGTTCTTATTCGTTTTCCGGTAAGAAGGTGATCGCGAAATTCATAGAAGTTGGAGGAGAGGCGAAGGTGATCGCGAGCTTGAGAGGCAGAGAGATGGTGGAGAGAATCGCGAGTTGGAGGCAGAGCAGAGAGCTGGTTTATTTGGTGAAAGTGATTGCGTGTAATTAAGGTATGCGGCTGCCTTTTTATTTTTTGGCACGTGTGGGCCTTGGGTCCACAGTAAATTAATGGTGGACCTGGTCCATACAAGAATTTTTCCAATTCTAAACAGCGCCGTAGTGACTCAGATTCAGACTCGAACTCGGATTCGCACCAAAAAGAGAGGAGGTGGTGTCGTAGACAAGTCAGTCGATTAGGGGGTCATTACCGTGCTGTCAGCATTAATGGGTCACCTCTGTAATCTCTAACCAGTAAACGTGAAAGAGAGAAAAAATTGCAACAACAAAAAAAGTGAACTCAACAACACATTTCAGCTCAGCCCACCCCACCCTTCAACAAAAAGAAAACACAACCCTTTATTATTTTGCTTTTTATTTTTGGTGTTCTTACAGAAAAGGGTAGAGAGCGTGGGAGAATATAGATCCAAATATCTCCGAATTTTTGGAGAGAGAAAGTGAGTCAATCACAGCCATTCTACTCATTTTATTACCAACTCCCACCAACTGAGTAGTAACCTGGAATTTTCAGGATTATTACTCAGGTTTATTTTTGAATATTTCTGCAGTCTTTGTGCTTTTCCTCAGGTACTTAATCCCTGTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTAAATTAATGTGATGCGTTCATAAAAGTTTTGATTTTTTTTGTTGGGTTTTAGAATCTAGCTATTGGGTTGGTTGATGCAAAATTAAAGGTGTTATTTGATTCACTGTGCTTGTAGTTGAATAATTTGTTTAATTTGCATTTTTTTTGTTTATCCATTTGCAGATTTGA

mRNA sequence

ATGACTTCAGAATTTTCCATTGCTCTTCGATGTTCTTATTCGTTTTCCGGTAAGAAGGTGATCGCGAAATTCATAGAAGTTGGAGGAGAGGCGAAGGTGATCGCGAGCTTGAGAGGCAGAGAGATGGTGGAGAGAATCGCGAGTTGGAGGCAGAGCAGAGAGCTGGTTTATTTGGTGAAAGTGATTGCGTTAAACGTGAAAGAGAGAAAAAATTGCAACAACAAAAAAAGTGAACTCAACAACACATTTCAGCTCAGCCCACCCCACCCTTCAACAAAAAGAAAACACAACCCTTTATTATTTTGCTTTTTATTTTTGGTGTTCTTACAGAAAAGGGTAGAGAGCGTGGGAGAATATAGATCCAAATATCTCCGAATTTTTGGAGAGAGAAATCTTTGTGCTTTTCCTCAGATTTGA

Coding sequence (CDS)

ATGACTTCAGAATTTTCCATTGCTCTTCGATGTTCTTATTCGTTTTCCGGTAAGAAGGTGATCGCGAAATTCATAGAAGTTGGAGGAGAGGCGAAGGTGATCGCGAGCTTGAGAGGCAGAGAGATGGTGGAGAGAATCGCGAGTTGGAGGCAGAGCAGAGAGCTGGTTTATTTGGTGAAAGTGATTGCGTTAAACGTGAAAGAGAGAAAAAATTGCAACAACAAAAAAAGTGAACTCAACAACACATTTCAGCTCAGCCCACCCCACCCTTCAACAAAAAGAAAACACAACCCTTTATTATTTTGCTTTTTATTTTTGGTGTTCTTACAGAAAAGGGTAGAGAGCGTGGGAGAATATAGATCCAAATATCTCCGAATTTTTGGAGAGAGAAATCTTTGTGCTTTTCCTCAGATTTGA

Protein sequence

MTSEFSIALRCSYSFSGKKVIAKFIEVGGEAKVIASLRGREMVERIASWRQSRELVYLVKVIALNVKERKNCNNKKSELNNTFQLSPPHPSTKRKHNPLLFCFLFLVFLQKRVESVGEYRSKYLRIFGERNLCAFPQI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13875.1Spo13875.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo13875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo13875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo13875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo13875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005215 transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression