Spo13963 (gene)

Overview
NameSpo13963
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPollen Ole e 1 allergen and extensin family protein, putative
LocationSpoScf_00450 : 32331 .. 33578 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGTAACTTATTACACCATACTGTAGTTTTATACTTCATACATGGTTGCACTTTCTGTGTTATCTGTTGTTAAGAATAGTAGTTTCGAGTTATCTGTTGTCAGTGTTGAAAACCAACTTTATTACTGAAAGTATGATCAAATTTAAGGCATAGTAATGCAACCTACTGAAAAACTGGCAGTGGTACCGAACAAGTTCTTATCTTTACAATGATTGTAAAGTCTGAAAGTTGTGAAATTGACTTAATTTTCTGTTTTGGGGCCGGGTCGGGGTTGAATGATAAAAAAAAAAACATGTAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAGTAACCCTTAACCCTTCTTTTAGGTTATTTGTAGTTTGCTTTCCCCTTTTCTTGTTTTTTTATATTAATAAAAAACTAAATTATATACTTTAATTTGTTAGTAAACTATTTGTTCTTATTAAACTTTTAGTATGGTGCTTATGATTTTAGTAAAGGAATGATACGTCACAATTTTCTATATTAATTATGTCGTCCAAGAATTATAAACTCTGATCCCCTTATGTCATGTGGCATAATGTTAATTCGGTAGGAATAACTAAATGACATTGGATGCCAAGCTGTTTAAAACTATTGATAAAAAATGAACAGCAAGTAGAATGTCTGTTCCAGTTCCAGGGCCACATATATAAATTCAACATATGAATAATGGTAGCAACAACTAAACAACATCTCTGTCCAATCCACACCCAAATAACACATCATTTATATAA

mRNA sequence

ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAGTAACCCTTAACCCTTCTTTTAGGTTATTTGTAGTTTGCTTTCCCCTTTTCTTGTTTTTTTATATTAATAAAAAACTAAATTATATACTTTAATTTGTTAGTAAACTATTTGTTCTTATTAAACTTTTAGTATGGTGCTTATGATTTTAGTAAAGGAATGATACGTCACAATTTTCTATATTAATTATGTCGTCCAAGAATTATAAACTCTGATCCCCTTATGTCATGTGGCATAATGTTAATTCGGTAGGAATAACTAAATGACATTGGATGCCAAGCTGTTTAAAACTATTGATAAAAAATGAACAGCAAGTAGAATGTCTGTTCCAGTTCCAGGGCCACATATATAAATTCAACATATGAATAATGGTAGCAACAACTAAACAACATCTCTGTCCAATCCACACCCAAATAACACATCATTTATATAA

Coding sequence (CDS)

ATGGAGAAACCCAGCAGCATTTTGTGTCTTCTTCTCTTCTTCCTTACGCTTTCTTTCTCCGAAGGCCGTCACCAGTCTCACCACCCAGCAGCCAAACCCAGGTCTCAGATCACTGTAATTGGCACTGTTTACTGTGACATTTGCTCCAATAACACCTTTTCTAGGCACAGCTACTTTCTACCAGGAGTGGAAGTGAAAGTAGATTGCAAGTTCAAGGCAACAGCACCAAGAACAGCAGAAGAAATAACATTCTCGGTGAATCGAACAACAAATGAATATGGATGGTACAAATTGGAAATACCATCAGTAGATGGGATAGAATGTGCAAGAGGAGCAGCTGTTGAATCAATTTGCAGGGCAACTTTAATTGGAAGTTCTACTTCTAAATGCAATGTCCCTGGTTATCAGACTACTACTGATGTTGTTTATTTTAAGTCCAGGAAACAAAATATCTGTATTTATGGATTAAGTGCTTTGAACTTCAGACCTTCCACCAAGAACAAGGATTTGTGTGGAAATTAG

Protein sequence

MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13963.1Spo13963.1mRNA


Homology
[Close]
BLAST of Spo13963.1 vs. NCBI nr
Match: gi|902113108|gb|KNA03818.1| (hypothetical protein SOVF_205520 [Spinacia oleracea])

HSP 1 Score: 362.8 bits (930), Expect = 3.200e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

		  

Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL
Sbjct: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120
           PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA
Sbjct: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120

Query: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN
Sbjct: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 173
[Close]
BLAST of Spo13963.1 vs. NCBI nr
Match: gi|731337801|ref|XP_010679984.1| (PREDICTED: pollen-specific protein-like At4g18596 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.1 bits (788), Expect = 9.400e-81
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 1 

		  

Query: 1   MEKPSSILCLLLFFLTLS--FSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSY 60
           MEK SSILCL+LFF+TLS   S+G H  HH A+KPRSQITVIGTVYCDICSNNTFSRHSY
Sbjct: 1   MEK-SSILCLVLFFITLSASLSQGGH-GHHSASKPRSQITVIGTVYCDICSNNTFSRHSY 60

Query: 61  FLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESIC 120
           FLPGVEVKVDCKFKATA R AEEITFSV+RTTNEYGWYKLEIPSVDGIECARGA VES+C
Sbjct: 61  FLPGVEVKVDCKFKATAARAAEEITFSVSRTTNEYGWYKLEIPSVDGIECARGATVESVC 120

Query: 121 RATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           RA+L+GSSTSKCNVPGY TTTDVVYFKS +QNICIYGLSALNFRPS KNKDLC N
Sbjct: 121 RASLVGSSTSKCNVPGYTTTTDVVYFKSSQQNICIYGLSALNFRPSRKNKDLCAN 173
[Close]
BLAST of Spo13963.1 vs. NCBI nr
Match: gi|702443943|ref|XP_010024180.1| (PREDICTED: major pollen allergen Ole e 1-like [Eucalyptus grandis])

HSP 1 Score: 224.6 bits (571), Expect = 1.400e-55
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 1 

		  

Query: 12  LFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKF 71
           +FF+   F      S    A+P S ITV+G VYCDIC NNTFSRHSYFLPG EVK+DCKF
Sbjct: 7   IFFIVSLFFIHSLPSQVEPARPNSHITVMGMVYCDICFNNTFSRHSYFLPGAEVKIDCKF 66

Query: 72  KATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCN 131
           +A +P+T E+I+FSV RTTN YG YKLEIP+VDGIECAR +A+ S C A+L+GSS+  CN
Sbjct: 67  EAVSPKTMEKISFSVKRTTNRYGVYKLEIPAVDGIECARDSAIVSFCEASLMGSSSDSCN 126

Query: 132 VPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           VPGY+TTTD + FKS++ N+CIY L+ALN+RPS K+K LCG
Sbjct: 127 VPGYRTTTDQIAFKSKQANLCIYSLNALNYRPSKKDKSLCG 167
[Close]
BLAST of Spo13963.1 vs. NCBI nr
Match: gi|743904736|ref|XP_011045748.1| (PREDICTED: major pollen allergen Ole e 1 [Populus euphratica])

HSP 1 Score: 216.1 bits (549), Expect = 4.900e-53
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 1 

		  

Query: 10  LLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDC 69
           L+LFFL+  F         P+ K  + I+V+G VYCDICSNNTFSRHSYFLPG EV++DC
Sbjct: 4   LVLFFLSFFFINSMSSKVEPSKKTSAHISVMGLVYCDICSNNTFSRHSYFLPGAEVRIDC 63

Query: 70  KFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSK 129
           KFKA+ P+T E+I+FSVNRTTN YG YKLEIPSVDGI CA  AA++S C A+L+ SS+  
Sbjct: 64  KFKASWPKTREQISFSVNRTTNRYGMYKLEIPSVDGIACAL-AAIDSSCEASLMSSSSKA 123

Query: 130 CNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           CNVPGY++TT+ +  K ++QN+CIY L+ALNFRPS  +  LCGN
Sbjct: 124 CNVPGYKSTTNEISIKVKQQNLCIYSLNALNFRPSKTDAGLCGN 166
[Close]
BLAST of Spo13963.1 vs. NCBI nr
Match: gi|357503585|ref|XP_003622081.1| (RALF-like protein [Medicago truncatula])

HSP 1 Score: 213.8 bits (543), Expect = 2.400e-52
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 1 

		  

Query: 7   ILCLLLFFLT--LSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL L+L F T  L     R +       P SQI+V+G VYCD CSNN+FSRHSYFLPG E
Sbjct: 5   ILLLILPFFTQFLEVEPARPKVLGKPRFPNSQISVMGFVYCDFCSNNSFSRHSYFLPGAE 64

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           VKVDC FKA + +T E+IT SVNRTTN+YG Y++E+PSVDG+ CA G  V S C+A LIG
Sbjct: 65  VKVDCMFKAISAKTTEQITLSVNRTTNKYGMYRIEVPSVDGVRCAEGTEVMSSCQANLIG 124

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SST+ CNVPGY++T +V+  K+RK N+CIY L+ALNFRPS K+  LCGN
Sbjct: 125 SSTTACNVPGYKSTANVISVKARKTNLCIYSLNALNFRPSKKDTGLCGN 173
[Close]
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAU3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205520 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.300e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1 

		  

Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL
Sbjct: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120
           PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA
Sbjct: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRA 120

Query: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN
Sbjct: 121 TLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 173
[Close]
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7U8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g131040 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.600e-81
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 1 

		  

Query: 1   MEKPSSILCLLLFFLTLS--FSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSY 60
           MEK SSILCL+LFF+TLS   S+G H  HH A+KPRSQITVIGTVYCDICSNNTFSRHSY
Sbjct: 1   MEK-SSILCLVLFFITLSASLSQGGH-GHHSASKPRSQITVIGTVYCDICSNNTFSRHSY 60

Query: 61  FLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESIC 120
           FLPGVEVKVDCKFKATA R AEEITFSV+RTTNEYGWYKLEIPSVDGIECARGA VES+C
Sbjct: 61  FLPGVEVKVDCKFKATAARAAEEITFSVSRTTNEYGWYKLEIPSVDGIECARGATVESVC 120

Query: 121 RATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           RA+L+GSSTSKCNVPGY TTTDVVYFKS +QNICIYGLSALNFRPS KNKDLC N
Sbjct: 121 RASLVGSSTSKCNVPGYTTTTDVVYFKSSQQNICIYGLSALNFRPSRKNKDLCAN 173
[Close]
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A059B3Z8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03355 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.600e-56
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 1 

		  

Query: 12  LFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKF 71
           +FF+   F      S    A+P S ITV+G VYCDIC NNTFSRHSYFLPG EVK+DCKF
Sbjct: 7   IFFIVSLFFIHSLPSQVEPARPNSHITVMGMVYCDICFNNTFSRHSYFLPGAEVKIDCKF 66

Query: 72  KATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSKCN 131
           +A +P+T E+I+FSV RTTN YG YKLEIP+VDGIECAR +A+ S C A+L+GSS+  CN
Sbjct: 67  EAVSPKTMEKISFSVKRTTNRYGVYKLEIPAVDGIECARDSAIVSFCEASLMGSSSDSCN 126

Query: 132 VPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           VPGY+TTTD + FKS++ N+CIY L+ALN+RPS K+K LCG
Sbjct: 127 VPGYRTTTDQIAFKSKQANLCIYSLNALNYRPSKKDKSLCG 167
[Close]
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: B7FIQ2_MEDTR (RALF-like protein OS=Medicago truncatula GN=MTR_7g027020 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.700e-52
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 1 

		  

Query: 7   ILCLLLFFLT--LSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL L+L F T  L     R +       P SQI+V+G VYCD CSNN+FSRHSYFLPG E
Sbjct: 5   ILLLILPFFTQFLEVEPARPKVLGKPRFPNSQISVMGFVYCDFCSNNSFSRHSYFLPGAE 64

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           VKVDC FKA + +T E+IT SVNRTTN+YG Y++E+PSVDG+ CA G  V S C+A LIG
Sbjct: 65  VKVDCMFKAISAKTTEQITLSVNRTTNKYGMYRIEVPSVDGVRCAEGTEVMSSCQANLIG 124

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SST+ CNVPGY++T +V+  K+RK N+CIY L+ALNFRPS K+  LCGN
Sbjct: 125 SSTTACNVPGYKSTANVISVKARKTNLCIYSLNALNFRPSKKDTGLCGN 173
[Close]
BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LDJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G563290 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.900e-52
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = 1 

		  

Query: 7   ILCLLLFFLTLSFS--EGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVE 66
           IL  +L  L  SF   E +    HP     SQITV+G VYCD CSNNTFS+HSYFL G E
Sbjct: 4   ILLFVLASLVPSFFLFEIKAAHSHPPRTTYSQITVMGLVYCDTCSNNTFSKHSYFLSGAE 63

Query: 67  VKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIG 126
           V++DCK KA  PRTAE+I FSVNRTTN+YG YKLEIPSVDGI CA  +A+ S C+A+L+G
Sbjct: 64  VRIDCKLKAETPRTAEQIAFSVNRTTNKYGVYKLEIPSVDGIRCAEDSAMVSFCQASLMG 123

Query: 127 SSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCGN 174
           SS+S CNVPGY++T+  +  KSR+ NICIY L+ LN+RPST++  LCGN
Sbjct: 124 SSSSSCNVPGYRSTSGEISIKSRQSNICIYSLNPLNYRPSTRDDILCGN 172
[Close]
BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G41050.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 195.7 bits (496), Expect = 2.400e-50
Identity = 94/175 (53.71%), Postives = 125/175 (71.43%), Query Frame = 1 

		  

Query: 1   MEKPSSILCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFL 60
           M++   +L LLL  L+L+    +H S    AKP  +ITV+G VYCD+CSNN+FS HSYF+
Sbjct: 1   MKQKLIMLLLLLQLLSLNSLSLKHSS----AKPNGKITVMGLVYCDVCSNNSFSNHSYFI 60

Query: 61  PGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESI--- 120
           PGVEV++ C+F + + RT E ITFS NRTTNE G YKL+I S++G+ CA  A  +S+   
Sbjct: 61  PGVEVRIICRFNSASSRTREMITFSANRTTNELGLYKLDITSLEGVACAAEAKKDSLMAS 120

Query: 121 CRATLIGSSTSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
           C+A+LIG S   CNVPG++TTT+ V FKS+  N+C+YG +ALNFRP  KN  LCG
Sbjct: 121 CQASLIGRSKDSCNVPGFRTTTEQVVFKSKISNLCVYGFTALNFRPLEKNLHLCG 171
[Close]
BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT3G26960.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 181.0 bits (458), Expect = 6.100e-46
Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 1 

		  

Query: 8   LCLLLFFLTLSFSEGRHQSHHPAAKPRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKV 67
           L +LL FL ++    +H S  P  KP ++IT++G VYCD+CS N+FS+HSYF+ GVEV++
Sbjct: 10  LFILLQFLLVNSLSSKHSS--PKPKPDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEVRI 69

Query: 68  DCKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGS-- 127
            C+FKA +  T E ITFS NRTTNE+G YK+ I S+D   CA   ++ S C+A+LIG   
Sbjct: 70  VCRFKAASSTTTETITFSANRTTNEFGLYKVAISSLD---CADVDSLASSCQASLIGRKN 129

Query: 128 -STSKCNVPGYQTTTDVVYFKSRKQNICIYGLSALNFRPSTKNKDLCG 173
            S S CN+PGY+TTTD V FKS++ N C+YG +ALNFRP  ++  LCG
Sbjct: 130 FSDSSCNIPGYRTTTDQVLFKSQQSNSCVYGFNALNFRPFKRDLALCG 172
[Close]
BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G13140.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.200e-44
Identity = 82/144 (56.94%), Postives = 105/144 (72.92%), Query Frame = 1 

		  

Query: 33  PRSQITVIGTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNE 92
           P S+ITV+G VYCD CS NTFSR SYFL GVEV V C+FKA++P+TAEE+  SVNRTTN 
Sbjct: 35  PSSRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASSPKTAEEVNISVNRTTNR 94

Query: 93  YGWYKLEIPSVDGIECARGAAVESICRATLIGSSTSK---CNVPGYQTTTDVVYFKSRKQ 152
            G YKLEIP VDGI+C  G A+ S C A ++ +S+     C++P +QT T+ V  KS++ 
Sbjct: 95  SGVYKLEIPHVDGIDCVDGIAISSQCSAKILKTSSDDNGGCSIPVFQTATNEVSIKSKQD 154

Query: 153 NICIYGLSALNFRPSTKNKDLCGN 174
            +CIY LSAL+++P  KN  LCGN
Sbjct: 155 RVCIYSLSALSYKPPHKNTSLCGN 178
[Close]
BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G15780.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.300e-11
Identity = 43/160 (26.88%), Postives = 74/160 (46.25%), Query Frame = 1 

		  

Query: 11  LLFFLTLSFSEGRHQSH-HPAAKPRSQITVIGTVYCDICSNNTFSRH-SYFLPGVEVKVD 70
           L+ FL +S + G  Q   H   K RS   V+GTVYCD C N  FS+  ++ + G  V V+
Sbjct: 13  LMIFLGISINGGLSQGQQHVMKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISGALVAVE 72

Query: 71  CKFKATAPRTAEEITFSVNRTTNEYGWYKLEIPSVDGIECARGAAVESICRATLIGSSTS 130
           C  + + P   +E+       T++ G +K+++P       ++       C   L+ SS  
Sbjct: 73  CIDENSKPSFRQEV------KTDKRGEFKVKLP----FSVSKHVKKIKRCSVKLLSSSQP 132

Query: 131 KCNVPGYQTTTDVVYFKSRK--QNICIYGLSALNFRPSTK 167
            C++    T++ +   KS    +N  ++      FRP  +
Sbjct: 133 YCSIASSATSSSLKRLKSNHHGENTRVFSAGFFTFRPENQ 162
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BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 51.2 bits (121), Expect = 7.300e-7
Identity = 30/91 (32.97%), Postives = 44/91 (48.35%), Query Frame = 1 

		  

Query: 41  GTVYCDICSNNTFSRHSYFLPGVEVKVDCKFKATAPRTAEEITFSVNRTTNEYGWYKLEI 100
           G+VYCD C     +R S FL G +VK++C+      RT   IT +    T++ G YK+E+
Sbjct: 39  GSVYCDTCRVQFVTRLSKFLEGAKVKLECR-----SRTNGTITLTKEAVTDKTGSYKMEV 98

Query: 101 PSVDGIECARGAAVESICRATLIGSSTSKCN 132
                     G   E +C   L+ S  S C+
Sbjct: 99  ---------TGDHEEEVCELVLVQSPDSGCS 115
The following BLAST results are available for this feature:
BLAST of Spo13963.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902113108|gb|KNA03818.1|3.2e-97100.hypothetical protein SOVF_2055... [more]
gi|731337801|ref|XP_010679984.1|9.4e-8186.2PREDICTED: pollen-specific pro... [more]
gi|702443943|ref|XP_010024180.1|1.4e-5563.3PREDICTED: major pollen allerg... [more]
gi|743904736|ref|XP_011045748.1|4.9e-5360.9PREDICTED: major pollen allerg... [more]
gi|357503585|ref|XP_003622081.1|2.4e-5260.3RALF-like protein [Medicago tr... [more]
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BLAST of Spo13963.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QAU3_SPIOL2.3e-97100.Uncharacterized protein OS=Spi... [more]
A0A0J8C7U8_BETVU6.6e-8186.2Uncharacterized protein OS=Bet... [more]
A0A059B3Z8_EUCGR9.6e-5663.3Uncharacterized protein OS=Euc... [more]
B7FIQ2_MEDTR1.7e-5260.3RALF-like protein OS=Medicago ... [more]
A0A0A0LDJ0_CUCSA2.9e-5260.9Uncharacterized protein OS=Cuc... [more]
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BLAST of Spo13963.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13963.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G41050.12.4e-5053.7Pollen Ole e 1 allergen and ex... [more]
AT3G26960.16.1e-4652.3Pollen Ole e 1 allergen and ex... [more]
AT5G13140.11.2e-4456.9Pollen Ole e 1 allergen and ex... [more]
AT5G15780.11.3e-1126.8Pollen Ole e 1 allergen and ex... [more]
AT5G45880.17.3e-732.9Pollen Ole e 1 allergen and ex... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31614FAMILY NOT NAMEDcoord: 1..173
score: 1.8
NoneNo IPR availablePANTHERPTHR31614:SF3POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 1..173
score: 1.8
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 39..137
score: 3.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0010286 heat acclimation
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0007020 microtubule nucleation
biological_process GO:0048767 root hair elongation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0055085 transmembrane transport
biological_process GO:0090351 seedling development
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006979 response to oxidative stress
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0015866 ADP transport
biological_process GO:0010114 response to red light
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010218 response to far red light
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0015867 ATP transport
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0048438 floral whorl development
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006397 mRNA processing
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0048439 flower morphogenesis
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0010207 photosystem II assembly
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009850 auxin metabolic process
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0006810 transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016556 mRNA modification
biological_process GO:0010050 vegetative phase change
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010051 xylem and phloem pattern formation
cellular_component GO:0009506 plasmodesma
cellular_component GO:0048046 apoplast
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0005622 intracellular
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005778 peroxisomal membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005795 Golgi stack
cellular_component GO:0009536 plastid
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0044464 cell part
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0042393 histone binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0019146 arabinose-5-phosphate isomerase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0015217 ADP transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0005347 ATP transmembrane transporter activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0005179 hormone activity
molecular_function GO:0008375 acetylglucosaminyltransferase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0008430 selenium binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo137830.79Barchart | Table
Spo002140.75Barchart | Table
Spo089350.75Barchart | Table
Spo108980.75Barchart | Table
Spo187780.75Barchart | Table
Spo268580.75Barchart | Table
Spo053070.75Barchart | Table
Spo084780.74Barchart | Table
Spo263550.72Barchart | Table
Spo093870.72Barchart | Table
Spo122280.72Barchart | Table
Spo007610.72Barchart | Table
Spo250080.72Barchart | Table
Spo273640.71Barchart | Table
Spo133930.71Barchart | Table
Spo189430.71Barchart | Table
Spo097690.71Barchart | Table
Spo108350.71Barchart | Table
Spo224510.70Barchart | Table
Spo266970.70Barchart | Table
Spo270810.70Barchart | Table
Spo009430.70Barchart | Table
Spo198220.70Barchart | Table
Spo193720.69Barchart | Table
Spo218330.69Barchart | Table
Spo176120.69Barchart | Table
Spo221670.68Barchart | Table
Spo011040.68Barchart | Table
Spo051250.68Barchart | Table
Spo075480.68Barchart | Table
Spo108640.68Barchart | Table
Spo108900.68Barchart | Table
Spo142250.68Barchart | Table
Spo216600.68Barchart | Table
Spo240810.68Barchart | Table
Spo248340.68Barchart | Table
Spo154610.67Barchart | Table
Spo257170.67Barchart | Table
Spo123700.67Barchart | Table
Spo200500.67Barchart | Table
Spo072360.67Barchart | Table
Spo095540.67Barchart | Table
Spo136910.67Barchart | Table
Spo216350.66Barchart | Table
Spo024800.66Barchart | Table
Spo140010.66Barchart | Table
Spo116880.66Barchart | Table
Spo181040.66Barchart | Table
Spo186050.66Barchart | Table
Spo191100.66Barchart | Table
Spo191230.66Barchart | Table
Spo088240.66Barchart | Table
Spo233820.66Barchart | Table
Spo240160.66Barchart | Table
Spo243250.66Barchart | Table
Spo246750.66Barchart | Table
Spo282650.66Barchart | Table
Spo054020.66Barchart | Table
Spo035720.66Barchart | Table
Spo269750.66Barchart | Table
Spo002050.66Barchart | Table
Spo069530.66Barchart | Table
Spo211440.65Barchart | Table
Spo097770.65Barchart | Table
Spo063350.65Barchart | Table
Spo094340.65Barchart | Table
Spo182230.65Barchart | Table
Spo012170.65Barchart | Table
Spo035920.65Barchart | Table
Spo122340.65Barchart | Table