Spo13981 (gene)

Overview
NameSpo13981
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02365 : 4730 .. 7166 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAATGTTCCGTACGTTCATCCTTACACAATTGTCATGAAAAACTTTCCGATAGAGTTCATCGGAGGGAAGCCAATAAGCAGAAGTCTTTCTTGGCTTAAACATGAACTCATCGGCCTTGGGTTCAGGGTAACCAAGCTGAGGGGATGATGGGACAGGTTTGGTTTCTTATGATATGCCTTCGTTGATTTTGGGGGGCACCAAGAACATTTTGAGTCTGCTGCACGGTTGGATAGACAGTATGAGCTGGCAGGGCATGATAGAACACACTATCTATCTAATATGGGAGCCCCGACTGGGATTTATGCATGGCTGGCTACGAGGACAGATGCTCGTCTATTTAGAGGTGCTCATCTGTGCTATCAAACTGCTGATATAGCAACAATAGCTGGAATCAACGTGGAAACGACGGTGCATGAGAGCATTAGCACATATGAAGCAGTTTAAGCCAGTTTTAACAATATGTACAATCTTGCTTGAACGTCTCGTCCATGTAGTGATGGTGGTGAAGCTGATGGTGCTTCCATGGATGATGATGCAGTCTTTGTTTCATGCACTAGTTTTATTTCCTCTTTTATGCACCCCTGCTGGTAGTTTTATTTCCTGTTTTCTGCACCCTTGTTTTAATTATCTATTTGCAGCCAAGTTGAGTTATATATGTTGCCTCTATATTTTGTGGTTTTTGTGGTTTTTTATGTTACCCTAATAATATATAATGTTGTTTGTGTTTTATCTCTTAATTCGTAATCTGTTGAATATGTATGATGTACTTGTTTGTTATCATAGACGTTTGATAAGTGTCCTAACTTCTATATTTATATATTTGGTCACATCAATATACCTATTTGGTAATTTCACTCAGCTACTAGAATATTGTACTTCATGTTATATGTTCGGAAATGGCCATAAATATATTTGGTAATGGCCTATTGAACTACCATACTGGTTTTTTAATCATCATTGTGCGTTGGTAGTGACCACAAATATTCATAGACAGTACTATATTCAGGGTTTGTCACTCAAGTTTGGTAATTTCCACGTCCGGGAATTAATTCTAAATTCAACTACTATTCATCGTCTTCTTCCTTCAAACCCAAAACGCAATTTTCAGCATCTTTTTCCTCGGACCTCCAATAGCTTATACGCACCCAAACTGTCAATGTGTAACTTTGAATTCAACCAAACAACATTACGAAGTACACTGTCAACAAAATTTCTAGATCTAAAACATAAATTTGCACCACTGATCTGAAAATTTGAGAAACCATTTTTTTAACAATTCTTAACCAAACTTCGACAACCATTTCTCTTTATCATCAAATTAATCTGCGTTCGGAAACGTTGCAGCTCTCGTTGACAGCTATTGCCATTCAATTTTTTTTTTCCTGGACTATGAGCAGAGGTTGAAGATGATGGAAATCATGGAATGGTGTCTCGAGAGAGTTGAACTTAACCCATAAATTAACAAAACCGAAAAGTTAATTATTTTCCTAATTATTTTTGGAAATTATTTATTGATTTTCACAAAAATAAATATATTGATTTTTCATATTTCCCAAAAATCAATTAAATTATTTTTGGATAAAAAAAATAAAGATAAAAAAAAATAAAAAAAATATAAAAGAAAATCAATTTATGTGGTCCATATTAATTCCACTACCACGGTTATTTTTATCATGACTATCTTAGAATTTTCACACCCATACACCACATGCCAAATAGTTAGTCTTGTTTATTTTACTGCAGTATTCTCGATATTACGTACTTTGTATTTTTGTAATACAAACGAGATACTACTTTTTATGATAGTGTGTAGATTAATCACACTAACATACCCTAAAATGGAAGTAGGTTTCCAATGTACTTGGTATAATTTTGATATCATTCGTAAAACTTGACACTTAACATCGACTACGCTCTACAAAAATTCTCCCAAACCAACATCTCTTAGTTAAGCTAGCCGGTCATTGAACCGAAAAACCAACCCGGAATAACTGAGCGGGCATAACTGCATTAGGTGTGTAACAGAAATTGACCGCAGAAATGTGGAAGCAGACAAAACCACAAAGCCCAAATAAAAAAACAAATAAATAAAGATGCTACATGATCTTCAACTGGCATTTTAGTGTGGTGGAGAGAGAAGAGAGGTGGAGCACTCTGTTCACGTAACTGATAACCCCTCTGCTTCATTTCGCCCACTTGAAAAACCCAGAAAGTAATAAATACTACGGAGTACTATAAAAACTTTTACATTGTTCACTTTATAACCCAAACTTTCACTTTACCCATAAATCAAAATTTAAATTTCAGGAAGAAAATCAAAATCAAAATCAAAACCAAAATCAAAGTGGGTCTGAATCAAGAACAAAAAGCGAAATTAACCCAGGAATTTATGTGGGTATTTTTTCAGAAATTTGTCGATATTATTTAA

mRNA sequence

ATGGCTTCCAATGTTCCGTACGTTCATCCTTACACAATTGTCATGAAAAACTTTCCGATAGAGTTCATCGGAGGGAAGCCAATAAGCAGAAGTCTTTCTTGGCTTAAACATGAACTCATCGGCCTTGGGTTCAGGAAAGTAATAAATACTACGGAGTACTATAAAAACTTTTACATTGTTCACTTTATAACCCAAACTTTCACTTTACCCATAAATCAAAATTTAAATTTCAGGAAGAAAATCAAAATCAAAATCAAAACCAAAATCAAAGTGGGTCTGAATCAAGAACAAAAAGCGAAATTAACCCAGGAATTTATGTGGGTATTTTTTCAGAAATTTGTCGATATTATTTAA

Coding sequence (CDS)

ATGGCTTCCAATGTTCCGTACGTTCATCCTTACACAATTGTCATGAAAAACTTTCCGATAGAGTTCATCGGAGGGAAGCCAATAAGCAGAAGTCTTTCTTGGCTTAAACATGAACTCATCGGCCTTGGGTTCAGGAAAGTAATAAATACTACGGAGTACTATAAAAACTTTTACATTGTTCACTTTATAACCCAAACTTTCACTTTACCCATAAATCAAAATTTAAATTTCAGGAAGAAAATCAAAATCAAAATCAAAACCAAAATCAAAGTGGGTCTGAATCAAGAACAAAAAGCGAAATTAACCCAGGAATTTATGTGGGTATTTTTTCAGAAATTTGTCGATATTATTTAA

Protein sequence

MASNVPYVHPYTIVMKNFPIEFIGGKPISRSLSWLKHELIGLGFRKVINTTEYYKNFYIVHFITQTFTLPINQNLNFRKKIKIKIKTKIKVGLNQEQKAKLTQEFMWVFFQKFVDII
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13981.1Spo13981.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo13981.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13981.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13981.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13981.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0009657 plastid organization
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016311 dephosphorylation
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0016310 phosphorylation
biological_process GO:0006768 biotin metabolic process
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0015770 sucrose transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0010206 photosystem II repair
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0009744 response to sucrose
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009637 response to blue light
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0006364 rRNA processing
biological_process GO:0006979 response to oxidative stress
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0051604 protein maturation
biological_process GO:0006464 cellular protein modification process
biological_process GO:0019760 glucosinolate metabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009414 response to water deprivation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0051301 cell division
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:0042793 plastid transcription
biological_process GO:0048653 anther development
biological_process GO:0017001 antibiotic catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0046168 glycerol-3-phosphate catabolic process
biological_process GO:0006650 glycerophospholipid metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0042318 penicillin biosynthetic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0030091 protein repair
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0009651 response to salt stress
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0043090 amino acid import
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0006863 purine nucleobase transport
biological_process GO:0006412 translation
biological_process GO:0010286 heat acclimation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016556 mRNA modification
biological_process GO:0042908 xenobiotic transport
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0007165 signal transduction
biological_process GO:0006457 protein folding
biological_process GO:0006886 intracellular protein transport
biological_process GO:0030154 cell differentiation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006788 heme oxidation
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0010024 phytochromobilin biosynthetic process
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0015995 chlorophyll biosynthetic process
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005730 nucleolus
cellular_component GO:0009331 glycerol-3-phosphate dehydrogenase complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005634 nucleus
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005887 integral component of plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0000785 chromatin
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0004602 glutathione peroxidase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008515 sucrose transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0003919 FMN adenylyltransferase activity
molecular_function GO:0008967 phosphoglycolate phosphatase activity
molecular_function GO:0008531 riboflavin kinase activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0015293 symporter activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004392 heme oxygenase (decyclizing) activity
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0008800 beta-lactamase activity
molecular_function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity
molecular_function GO:0004416 hydroxyacylglutathione hydrolase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo116880.83Barchart | Table
Spo233320.81Barchart | Table
Spo084070.80Barchart | Table
Spo002560.80Barchart | Table
Spo231540.79Barchart | Table
Spo237450.79Barchart | Table
Spo095540.79Barchart | Table
Spo250080.79Barchart | Table
Spo251960.78Barchart | Table
Spo108350.78Barchart | Table
Spo012520.78Barchart | Table
Spo126820.77Barchart | Table
Spo029180.76Barchart | Table
Spo007430.76Barchart | Table
Spo021060.75Barchart | Table
Spo002140.75Barchart | Table
Spo259850.75Barchart | Table
Spo069530.75Barchart | Table
Spo026960.75Barchart | Table
Spo026650.74Barchart | Table
Spo159950.74Barchart | Table
Spo152220.74Barchart | Table
Spo097690.74Barchart | Table
Spo137830.74Barchart | Table
Spo177400.73Barchart | Table
Spo246300.73Barchart | Table
Spo042000.73Barchart | Table
Spo240460.73Barchart | Table
Spo084780.73Barchart | Table
Spo092320.73Barchart | Table
Spo006770.73Barchart | Table
Spo153170.73Barchart | Table
Spo173370.73Barchart | Table
Spo169960.73Barchart | Table
Spo273640.72Barchart | Table
Spo269750.72Barchart | Table
Spo199380.72Barchart | Table
Spo259870.72Barchart | Table
Spo104910.72Barchart | Table
Spo149140.72Barchart | Table
Spo244250.72Barchart | Table
Spo175770.72Barchart | Table
Spo041230.72Barchart | Table
Spo053070.72Barchart | Table
Spo061700.72Barchart | Table
Spo185780.71Barchart | Table
Spo089350.71Barchart | Table
Spo183240.71Barchart | Table
Spo152730.71Barchart | Table
Spo182230.71Barchart | Table
Spo093870.71Barchart | Table
Spo266100.71Barchart | Table
Spo211440.71Barchart | Table
Spo201060.71Barchart | Table
Spo033620.71Barchart | Table
Spo026490.71Barchart | Table
Spo075480.71Barchart | Table
Spo200500.71Barchart | Table
Spo266970.71Barchart | Table
Spo192880.71Barchart | Table
Spo114170.71Barchart | Table
Spo005260.71Barchart | Table
Spo220040.70Barchart | Table
Spo011320.70Barchart | Table
Spo016280.70Barchart | Table
Spo029790.70Barchart | Table
Spo051250.70Barchart | Table
Spo066370.70Barchart | Table
Spo096250.70Barchart | Table
Spo109650.70Barchart | Table
Spo126090.70Barchart | Table
Spo144030.70Barchart | Table
Spo146300.70Barchart | Table
Spo194310.70Barchart | Table
Spo216600.70Barchart | Table
Spo233820.70Barchart | Table
Spo234150.70Barchart | Table
Spo237120.70Barchart | Table
Spo238530.70Barchart | Table
Spo244300.70Barchart | Table
Spo257170.70Barchart | Table
Spo014260.69Barchart | Table
Spo204580.69Barchart | Table
Spo211550.69Barchart | Table
Spo215660.69Barchart | Table
Spo216000.69Barchart | Table
Spo002050.69Barchart | Table
Spo169300.69Barchart | Table
Spo008720.69Barchart | Table
Spo097980.69Barchart | Table
Spo281860.69Barchart | Table
Spo238000.69Barchart | Table
Spo154610.69Barchart | Table
Spo142560.69Barchart | Table
Spo129760.69Barchart | Table
Spo115240.68Barchart | Table
Spo237570.68Barchart | Table
Spo243240.68Barchart | Table
Spo151430.68Barchart | Table
Spo064530.68Barchart | Table
Spo258530.68Barchart | Table
Spo168010.68Barchart | Table
Spo209120.68Barchart | Table
Spo093350.68Barchart | Table
Spo063980.68Barchart | Table
Spo146670.68Barchart | Table
Spo004980.68Barchart | Table
Spo212150.68Barchart | Table
Spo005390.68Barchart | Table
Spo050120.68Barchart | Table
Spo009430.68Barchart | Table
Spo218330.68Barchart | Table
Spo083510.67Barchart | Table
Spo062780.67Barchart | Table
Spo050130.67Barchart | Table
Spo176120.67Barchart | Table
Spo046530.67Barchart | Table
Spo029190.67Barchart | Table
Spo182850.67Barchart | Table
Spo249130.67Barchart | Table
Spo154990.67Barchart | Table
Spo116680.67Barchart | Table
Spo192170.67Barchart | Table
Spo011550.67Barchart | Table
Spo193040.67Barchart | Table
Spo133930.67Barchart | Table
Spo080970.67Barchart | Table
Spo209300.67Barchart | Table
Spo211590.67Barchart | Table
Spo123320.67Barchart | Table
Spo229980.67Barchart | Table
Spo262110.67Barchart | Table
Spo090080.66Barchart | Table
Spo151300.66Barchart | Table
Spo112850.66Barchart | Table
Spo155240.66Barchart | Table
Spo161860.66Barchart | Table
Spo108640.66Barchart | Table
Spo181480.66Barchart | Table
Spo119290.66Barchart | Table
Spo085910.66Barchart | Table
Spo264230.66Barchart | Table
Spo194570.66Barchart | Table
Spo206480.66Barchart | Table
Spo221670.66Barchart | Table
Spo228110.66Barchart | Table
Spo230350.66Barchart | Table
Spo231240.66Barchart | Table
Spo233270.66Barchart | Table
Spo266880.66Barchart | Table
Spo235580.66Barchart | Table
Spo271360.66Barchart | Table
Spo044860.66Barchart | Table
Spo247950.66Barchart | Table
Spo022320.66Barchart | Table
Spo256920.66Barchart | Table
Spo134990.66Barchart | Table
Spo246750.65Barchart | Table
Spo243310.65Barchart | Table
Spo224360.65Barchart | Table
Spo079410.65Barchart | Table
Spo193930.65Barchart | Table
Spo148300.65Barchart | Table
Spo119640.65Barchart | Table
Spo176100.65Barchart | Table
Spo100310.65Barchart | Table
Spo105710.65Barchart | Table
Spo112080.65Barchart | Table
Spo019250.65Barchart | Table