Spo14073 (gene) | SpinachBase

Overview


Name	Spo14073
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family
Location	chr4 : 80876748 .. 80877029 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCAGATTCCCTTCTATGCTATCTACTGCAAAACAAATCCTTAGCAGAAATCAGCATACAGCAGCAGTTCCAAAAGGTCATATCCCAGTTTACGTAGGTGATCAGGCTAACAAGAAGAGACATGTAGTGCCACTTTCATACTTAAGCCACCCTGCATTCCAATGCATGTTACACCATGCTGAACAAGAGTTCGGTTTTCATCATCTTATGGGTGGTCTGACGATTCCATGCTCCGAAGAAACATTCTTTGAACTAACTTCTGTACTCAAGTGCTAG

mRNA sequence

ATGGCTATCAGATTCCCTTCTATGCTATCTACTGCAAAACAAATCCTTAGCAGAAATCAGCATACAGCAGCAGTTCCAAAAGGTCATATCCCAGTTTACGTAGGTGATCAGGCTAACAAGAAGAGACATGTAGTGCCACTTTCATACTTAAGCCACCCTGCATTCCAATGCATGTTACACCATGCTGAACAAGAGTTCGGTTTTCATCATCTTATGGGTGGTCTGACGATTCCATGCTCCGAAGAAACATTCTTTGAACTAACTTCTGTACTCAAGTGCTAG

Coding sequence (CDS)

ATGGCTATCAGATTCCCTTCTATGCTATCTACTGCAAAACAAATCCTTAGCAGAAATCAGCATACAGCAGCAGTTCCAAAAGGTCATATCCCAGTTTACGTAGGTGATCAGGCTAACAAGAAGAGACATGTAGTGCCACTTTCATACTTAAGCCACCCTGCATTCCAATGCATGTTACACCATGCTGAACAAGAGTTCGGTTTTCATCATCTTATGGGTGGTCTGACGATTCCATGCTCCGAAGAAACATTCTTTGAACTAACTTCTGTACTCAAGTGCTAG

Protein sequence

MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo14073.1	Spo14073.1	mRNA

Homology

[Close]

BLAST of Spo14073.1 vs. NCBI nr
Match: gi|902225502|gb|KNA20089.1| (hypothetical protein SOVF_055590 [Spinacia oleracea])

HSP 1 Score: 143.3 bits (360), Expect = 2.200e-31
Identity = 71/93 (76.34%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPSMLS AKQIL+RNQ    VPKGH+PVYVG+QA+KKR+VVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSMLSHAKQILARNQQV--VPKGHVPVYVGEQADKKRYVVPLSYLSHPTFQYLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF H MG LTIPCS ETFF+LTS LKC
Sbjct: 61 RAEEEFGFDHPMGCLTIPCSTETFFKLTSELKC 91

[Close]

BLAST of Spo14073.1 vs. NCBI nr
Match: gi|731360102|ref|XP_010691635.1| (PREDICTED: auxin-induced protein 15A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 142.5 bits (358), Expect = 3.700e-31
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS++S+ KQI ++NQ  AAVPKG +PVYVGD A+KKR+VVPLSYLSHPAFQ +L 
Sbjct: 1  MAIRFPSVVSSVKQIRAKNQQ-AAVPKGCVPVYVGDHADKKRYVVPLSYLSHPAFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MGGLTIPCSEETF ELTS LKC
Sbjct: 61 RAEEEFGFNHPMGGLTIPCSEETFMELTSELKC 92

[Close]

BLAST of Spo14073.1 vs. NCBI nr
Match: gi|870848795|gb|KMT01084.1| (hypothetical protein BVRB_9g223390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 141.7 bits (356), Expect = 6.300e-31
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LSTAKQIL++NQ    VPKGHIPVYVG+QA+KKR+VVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSTAKQILTKNQQV--VPKGHIPVYVGEQASKKRYVVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS ++C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEELFFNLTSEIRC 91

[Close]

BLAST of Spo14073.1 vs. NCBI nr
Match: gi|731360098|ref|XP_010691632.1| (PREDICTED: auxin-induced protein 15A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 141.4 bits (355), Expect = 8.200e-31
Identity = 67/93 (72.04%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LS AKQIL++NQ    VPKGH+PVYVG+QA+KKRH+VPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSNAKQILTKNQQV--VPKGHVPVYVGEQADKKRHLVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS L+C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEEMFFNLTSELRC 91

[Close]

BLAST of Spo14073.1 vs. NCBI nr
Match: gi|731360100|ref|XP_010691633.1| (PREDICTED: auxin-induced protein 15A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 141.4 bits (355), Expect = 8.200e-31
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LSTAKQIL++NQ    VPK H+PVYVG+QA+KKRHVVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSTAKQILTKNQQV--VPKRHVPVYVGEQADKKRHVVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS L+C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEEMFFNLTSELRC 91

[Close]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_055590 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.500e-31
Identity = 71/93 (76.34%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPSMLS AKQIL+RNQ    VPKGH+PVYVG+QA+KKR+VVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSMLSHAKQILARNQQV--VPKGHVPVYVGEQADKKRYVVPLSYLSHPTFQYLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF H MG LTIPCS ETFF+LTS LKC
Sbjct: 61 RAEEEFGFDHPMGCLTIPCSTETFFKLTSELKC 91

[Close]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM81_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223490 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.600e-31
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS++S+ KQI ++NQ  AAVPKG +PVYVGD A+KKR+VVPLSYLSHPAFQ +L 
Sbjct: 1  MAIRFPSVVSSVKQIRAKNQQ-AAVPKGCVPVYVGDHADKKRYVVPLSYLSHPAFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MGGLTIPCSEETF ELTS LKC
Sbjct: 61 RAEEEFGFNHPMGGLTIPCSEETFMELTSELKC 92

[Close]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM70_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223390 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.400e-31
Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LSTAKQIL++NQ    VPKGHIPVYVG+QA+KKR+VVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSTAKQILTKNQQV--VPKGHIPVYVGEQASKKRYVVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS ++C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEELFFNLTSEIRC 91

[Close]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EDP6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223460 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.700e-31
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LSTAKQIL++NQ    VPK H+PVYVG+QA+KKRHVVPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSTAKQILTKNQQV--VPKRHVPVYVGEQADKKRHVVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS L+C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEEMFFNLTSELRC 91

[Close]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM03_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223430 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.700e-31
Identity = 67/93 (72.04%), Postives = 79/93 (84.95%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLH 60
          MAIRFPS+LS AKQIL++NQ    VPKGH+PVYVG+QA+KKRH+VPLSYLSHP FQ +L 
Sbjct: 1  MAIRFPSVLSNAKQILTKNQQV--VPKGHVPVYVGEQADKKRHLVPLSYLSHPVFQDLLQ 60

Query: 61 HAEQEFGFHHLMGGLTIPCSEETFFELTSVLKC 94
           AE+EFGF+H MG LTIPC+EE FF LTS L+C
Sbjct: 61 RAEEEFGFNHPMGALTIPCTEEMFFNLTSELRC 91

[Close]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.500e-19
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 1

		  
Query: 12 AKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAEQEFGFHHL 71
          AK+ILSR+  +AA PKG + VYVG+ + KKR++VPLSYLS P+FQ +L  +E+EFGF H 
Sbjct: 10 AKKILSRSTASAA-PKGFLAVYVGE-SQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 69

Query: 72 MGGLTIPCSEETFFELTSVLK 93
          MGGLTIPC E+TF  +TS L+
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.200e-19
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 1

		  
Query: 5  FPSMLSTAKQILSRNQHT-AAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAE 64
          F   L  AK+ILSR+    +A PKG + VYVG+ + KKR++VPLSYLS P+FQ +L  +E
Sbjct: 3  FVRSLLGAKKILSRSTAAGSAAPKGFLAVYVGE-SQKKRYLVPLSYLSQPSFQALLSKSE 62

Query: 65 QEFGFHHLMGGLTIPCSEETFFELTSVLK 93
          +EFGF H MGGLTIPC E+TF  +TS L+
Sbjct: 63 EEFGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.400e-19
Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 1

		  
Query: 5  FPSMLSTAKQILSRNQHTA-AVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAE 64
          F   L  AK+ILSR+   A A PKG + VYVG+ + KKR++VP+SYL+ P+FQ +L  +E
Sbjct: 3  FVRSLLGAKKILSRSTTAASAAPKGFLAVYVGE-SQKKRYLVPISYLNQPSFQALLSKSE 62

Query: 65 QEFGFHHLMGGLTIPCSEETFFELTS 90
          +EFGF H MGGLTIPC E+TF  +TS
Sbjct: 63 EEFGFDHPMGGLTIPCPEDTFINVTS 87

[Close]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.200e-18
Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 1

		  
Query: 5  FPSMLSTAKQILSRNQHT-AAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAE 64
          F   L  AK+ILSR+    +A PKG + VYVG+ + KKR++VP+SYL+ P+FQ +L  +E
Sbjct: 3  FVRSLLGAKKILSRSTGAGSAAPKGFLAVYVGE-SQKKRYLVPVSYLNQPSFQALLSKSE 62

Query: 65 QEFGFHHLMGGLTIPCSEETFFELTSVLK 93
          +EFGF H MGGLTIPC E+TF  +TS L+
Sbjct: 63 EEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.600e-18
Identity = 48/84 (57.14%), Postives = 63/84 (75.00%), Query Frame = 1

		  
Query: 9  LSTAKQILSRNQHT-AAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAEQEFG 68
          L  AK+ILSR+    +A PKG + VYVG+ + KKR++VPLSYL+ P+FQ +L  +E+EFG
Sbjct: 7  LLVAKKILSRSAAAVSAPPKGFLAVYVGE-SQKKRYLVPLSYLNQPSFQALLSKSEEEFG 66

Query: 69 FHHLMGGLTIPCSEETFFELTSVL 92
          F H MGGLTIPC E+TF  +TS L
Sbjct: 67 FDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 6.100e-24
Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQILSRNQHTA---AVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQC 60
          MAIR   +L ++KQ+L    H++   A+PKGH+ VYVG+   K+R VVP++YLSHP FQ 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 61 MLHHAEQEFGFHHLMGGLTIPCSEETFFELTSVL 92
          +L  AE+EFGF H MGGLTIPC+E+ F +L S L
Sbjct: 61 LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.7 bits (252), Expect = 2.500e-22
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 1

		  
Query: 1  MAIRFPSMLSTAKQIL--------SRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSH 60
          MAIR P +L ++KQIL        S +  +  VPKG++ VYVG+Q N KR VVP+SYL  
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQ-NMKRFVVPVSYLDQ 60

Query: 61 PAFQCMLHHAEQEFGFHHLMGGLTIPCSEETFFELTS 90
          P+FQ +L  AE+EFGF H MGGLTIPCSEE F +L S
Sbjct: 61 PSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLAS 96

[Close]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.7 bits (239), Expect = 8.200e-21
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 1

		  
Query: 7   SMLSTAKQILS----RNQHTAA-----------VPKGHIPVYVGDQANKKRHVVPLSYLS 66
           SML  AKQI      RN++ ++           VPKGH+ VYVG+Q  KKR VVP+SYL+
Sbjct: 6   SMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPAFQCMLHHAEQEFGFHHLMGGLTIPCSEETFFEL 88
           HP F+  L+ AE+E GFHH MGGLTIPC EE+F  L
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYL 101

[Close]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.7 bits (239), Expect = 8.200e-21
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = 1

		  
Query: 12 AKQILSRNQHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQCMLHHAEQEFGFHHL 71
          AK+ILSR+  +AA PKG + VYVG+ + KKR++VPLSYLS P+FQ +L  +E+EFGF H 
Sbjct: 10 AKKILSRSTASAA-PKGFLAVYVGE-SQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHP 69

Query: 72 MGGLTIPCSEETFFELTSVLK 93
          MGGLTIPC E+TF  +TS L+
Sbjct: 70 MGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 95.5 bits (236), Expect = 1.800e-20
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1

		  
Query: 9   LSTAKQILSRN-----------QHTAAVPKGHIPVYVGDQANKKRHVVPLSYLSHPAFQC 68
           LS AKQ L R+             T  VPKGH+ VYVG+  ++KR V+P+SYL+HP FQ 
Sbjct: 8   LSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYLNHPLFQG 67

Query: 69  MLHHAEQEFGFHHLMGGLTIPCSEETFFELTSVL 92
           +L+ AE+EFGF H MGGLTIPC+E+ F  L S+L
Sbjct: 68  LLNLAEEEFGFDHPMGGLTIPCTEDYFTALASIL 101

The following BLAST results are available for this feature:

BLAST of Spo14073.1 vs. NCBI nr
BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
BLAST of Spo14073.1 vs. TAIR (Arabidopsis)

BLAST of Spo14073.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902225502\|gb\|KNA20089.1\|	2.2e-31	76.3	hypothetical protein SOVF_0555...	[more]
gi\|731360102\|ref\|XP_010691635.1\|	3.7e-31	75.2	PREDICTED: auxin-induced prote...	[more]
gi\|870848795\|gb\|KMT01084.1\|	6.3e-31	73.1	hypothetical protein BVRB_9g22...	[more]
gi\|731360098\|ref\|XP_010691632.1\|	8.2e-31	72.0	PREDICTED: auxin-induced prote...	[more]
gi\|731360100\|ref\|XP_010691633.1\|	8.2e-31	73.1	PREDICTED: auxin-induced prote...	[more]

BLAST of Spo14073.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RMC7_SPIOL	1.5e-31	76.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8BM81_BETVU	2.6e-31	75.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8BM70_BETVU	4.4e-31	73.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8EDP6_BETVU	5.7e-31	73.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8BM03_BETVU	5.7e-31	72.0	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo14073.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
SAU21_ARATH	1.5e-19	60.4	Auxin-responsive protein SAUR2...	[more]
SAU19_ARATH	3.2e-19	56.1	Auxin-responsive protein SAUR1...	[more]
SAU20_ARATH	9.4e-19	55.8	Auxin-responsive protein SAUR2...	[more]
SAU24_ARATH	1.2e-18	53.9	Auxin-responsive protein SAUR2...	[more]
SAU23_ARATH	1.6e-18	57.1	Auxin-responsive protein SAUR2...	[more]

BLAST of Spo14073.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G21210.1	6.1e-24	54.2	SAUR-like auxin-responsive pro...	[more]
AT4G38840.1	2.5e-22	55.6	SAUR-like auxin-responsive pro...	[more]
AT4G34790.1	8.2e-21	53.1	SAUR-like auxin-responsive pro...	[more]
AT5G18030.1	8.2e-21	60.4	SAUR-like auxin-responsive pro...	[more]
AT4G34770.1	1.8e-20	52.1	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..90 score: 1.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..92 score: 1.2
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..92 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0010200	response to chitin
biological_process	GO:0009733	response to auxin
biological_process	GO:0015995	chlorophyll biosynthetic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0000785	chromatin
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26423	0.77	Barchart \| Table
Spo02371	0.75	Barchart \| Table
Spo14072	0.74	Barchart \| Table
Spo08591	0.74	Barchart \| Table
Spo14074	0.69	Barchart \| Table
Spo04200	0.68	Barchart \| Table
Spo14071	0.67	Barchart \| Table
Spo13499	0.66	Barchart \| Table
Spo01281	0.66	Barchart \| Table
Spo15249	0.66	Barchart \| Table
Spo00966	0.65	Barchart \| Table