Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACAAAAAAAAAAAATTAAGAACAGGAAATTAACGGTTGAGAAAATTTTGGCAAATAAACATCATCAGATATTCAGATAAAAGCGCAAAAATACCAAATTACATTACCAACTTTGAAATCTTAAACCCCTCTTTCTCTCATTTTTTTGCCCCCTCACTCTGTCTTCTTCAATGGCAATGGCCGTGAAACAACTATTTCGGCCGTTCGCAACCACAATCCGATGTCGGTCGCAGCGTCTCATCCATTCGGTTCAACCCAAGTTTGCCTTTTTCCACTGCTCCACTTCCCATAAAACCCTTCTTTGGTTGGGATTTTCTGAGTTATCACCCGTAACTTCTTCAACTCCCCTTCAAAGCAGGAACAGTCGTAGATTCAGTACTTCAACTGGGGCTTCGACTCCCCATCAAGTCAACGATTCAGGATCCATTGACTCACCTTTGATGCAATCTATGGAAAATAAGGTCCTTTTTGTTACTTGCTTAAGTTCTTGTCGTTTTTTTAATAAATTACTTGTATATATTTAAAATTGATGACTGATTTGAGGTGGGCTTTTCTCCTATTTTGTTTCCCATTTAGTTTTAGTTGATTTATGGATTCCTGCAATTTTCTGTTTTTCTTATTGATTGTTGTTTATGAGTACTGCTAGTGTGTACTAGGAAGAACTCAATTGAAGAACGGTTTCAATTATAAGAAATGATATTAGAGTTACTTTAAGCAAACTCAATTCTTGGGTTATGTATTCTGAAGTTTGAGCCATCAAGGAATTGAGTTTGGGTTGAGGGCTTTGGAGGGTTTCTGTGGAATTAAGGAGCATTAATCTCTGTGATTATGTAGGTTAAGCAAAGGAAGCTAACAACATTGCACTCGGTCAATTTTCTGTTCTGTACTTGTGTATCGTTTTTGATTTGTACTTGAGTAGTATAGCTCGGTGTTGGGTTCTGTTGTATGTTGTATTAGCAGCTGATCCTACGGTATGTGAAGTCCGTTTTCTGACATTGTTGGTTTTCAATCTAATGTGAAATTGTGTTTGGAACAGATTAGAGATGAGCTGAATGCTGAATCTGTTGCTGTAAAAGATGCTTACGGTGATGGTCGGCATGTCAGGTAAATTGCTTATGCTTTGTTTAACTTAGACTTGTTCGGTATCAGTCTATGGATAGTTTCAGGAAAAGGTACTACAATTGGAGGGGTATAGTTGTGCTATGACCTTAGACAATAGGAACCATGCCATGGCAAGAGTGTTGCGGACTTGGTCGATTTCTTCCTTCCTGGATTTTTAATTTTTGGGAGTGGGGTATGATACCTAATGTTTCGGCATGTTTGGATTGTTCACTTGTGTCAAAATTTATCTTGCAAATTTTCTTACCTCACTCATAATCGTAAACATATCTCAACACCTTCTAGCAATTGCCCAAATATTGCTTTATTGTGGGATTCTTATTAAGTGATCAATCTGTTTGTCGCCTTCATTGATGACTCTCAAATCATTGACATGCTGGTTTCCTTGGAAAAGGGCGTAAGATGAACTGTGTCTTTTGTTTCTGGTCCTCCATGCTTAGTTGTACTAAGTATATATTTGTGCACTGGTGGAACTGACATATTGAATATTGAGGGTACTATGTCATAGTACTTCTCTGAGTATTTAGAGATGAATGTGAAGGAAAATAGACGATAAGGTGCTTGAATGAATAGTGGATAAGATTGGATGAAAACAGTTACATTTATCTGTATAAACAGACAACGTGAAGGTTCCAAGTAATGAATGTTGTGCTCAAGAAATCTAAAGATAAACTAAATACAAGTGATCTGAAATAGGTTCATAGCTGTCTGTACTTTGGTGAGTTATCCTGTGTTAAAAAGATAATTTCCAACAGCAAAACATCATCATCCCTTTTAACTATGTTGTAAGTACAATATTCTAGACTGCCAGACTAGTGCCTGACAATTTGTCGACTACGTCATATAGAACGTTTTTTCTGACCTTCCATTTGCAAGATAGGTTTTAGAAATTATTCCTTCTCTTGGGGTCCTTGGGGAGGAGGAACGACCAGCATATGGATAATTTTGTCACAGACTCAAACCCTCCAATTGAAATAATTCCATGATTGTGGAGAGCTCCCTAACTTTATTTGCAAAGGAGGCAAACAAGCTGTGCCATACACATAGAAACTCCACGCTTGTTGACGTGGGACCCACTTATGTAAACAGTAAACAAGCTTAGTTGTTAGAACCTTCCTCTGTTGCCTCATTCTGTTACCAATCCGAGAAACATGCTGTCCTCTGTTGCCTGATCTCGTTGGTCTTCTGCTTAACAAAGTTAGAGCAACACCAATTTTTTGGCCTTCCTGTTAGAGAGGCACAATTCCCAGCCGTCGTTGAACAAAGTTGTTCATGTGTTCCAGTGTTTGTTCCTCTCGAGAATTTATGTACCATTTCATCAAAGGTTACCTGATATTTTCTTCTTAAAAATATGAAGTCGTCCTCACTAGGCAGGTTCAGAATGTTTTGACATTTTGTTACACCATATATATTTCAGCAGAAGTAGCTAGTAGAAAATTTGAAATGCCTTGTCTTTTAACTCTTTTTTTACATGTATAGCAGAAAATTAGAAAGACCTAGTTTATTTATTTTTTGAATAACTGTCTTTTAAGTCATGGTTCTACTCAGTTTCAACTTCTTCTGTCCCGACTTGGCTTTCACACTGTCTCAAAACATAATAATTAACGGTACGGCATAGTCTTGCAATACCCTTTACAACTCGTTTGGTAGCCGGCCATAAATGGTGCCAATGAGAATGAATTTGGGTGTAATTTTGTAAGGAAAATCAACATTTATTCCCATGGTAATGTTTACTTGAGTACTTAACTCAAAATTATCTCTTTTTCTTCATAAATTTCCATTACCATTTTGGGGGAGTGGTATACTGGTATTGGGTGAGAATGCAAATTTATGAAGAAAAACACCATGTTTCAGATAGGTTTCATTACCATGGACATTAATACATTATGATGTTATTTTTCTTGCCAAATATTACTTAGATTTATTCTCATTCTCACCATTTATTACCTGTTATCAAACGAGCCGTTACAGTAATTATGTTTCTATACGCTCCCTGTTATTTAAGTTGTGGAAAATCAATCATATACCGCTACTAATTAACAGAAGAGAATTTTCCTATACATCCAAAAAATTTTTTTGACTATTTATTTTAGACTGAAGGAGTTATTTGGAAGTACAACCAAGCTTAATCTAAAGCAAAATCCTCCTCTCCCTCAAACTTTGGAGGCCTTCTTAGGTTCCGTATACCTTTGGACATAAGATTCTCATACTCCAATTATTGTTACTAGTTACTGTAGTTTAAAAAAGACGTGACTATGACTGAAAGGTTGATTGCGAGGCAAGAAATTTATGTGATTTCTTCCATTTCCTCCTCCAGCTATGAAAAAAGTAATCAGGAAATGGATGCGCTCATGTTTACTTATAGTGTTTTATGCCTTATTTTATGGCAGCATCGATGTTGTGTCTTCAGCATTTGAGGGAAAAACAGCTGTAAATAGGCAGAGAATGGTGTACAAGGCTATATGGGAAGAGCTTCAGAACACTGTGCATGCAGTCGACCAGATGATTACTAGAACACCTAGTGAAGCAGCGGACAAGTGATATTATTTGGATTAGTAATTAAAACTGGTTGTTTGATTTTGATAAATTAGCTGGATTGTTGTAATTTTATTTGGGCATGAAATAAAGTTGGTGACATTTCTCCAGCTTCTGATTTGGTGTCTTTGAAAGGTGTAGAGTATTTGTGTGAGCTAATCCTAATGAATGGTTTTCATGCAATGATATCATTTGAGACATTTATGGTCCAGGTTAACAAGTTATGACTACTCTGAGAAAAACAAGAGTATATTGTACTTATTATGGTCACGAAACAGTTGTATAGAAAAAAAGAAGGCAGGATGTTTCCTTTGTATGAACTAGTCTACAGTTAAAGAGCATTGAAATCTGTAAATGGTGGGTGTTTGGCACAGATGAGAATTGAGAAGGTCTCAGGCGGAGGTTGAATCCAAGTCATAAACAGCAACAAATGGCATTAAGACACTACCAATCCAGAGTTTGCCGTCTCTTTCCTCGACTTCGCTGACAGCTTTGACAACCTTCCCCGGGGCATCCTCCAAGACCTGTAGGACCTGACCTTGAGGGCTATACTTGATGATGATACCATGTGGCCAGCCTCCAATGAAGAACAAGAAGTGATACTTTGCTTTAATTGGCAGCTTCAGCACGAAATTCCTGAATCTAGGGTTTGCTGCCATCAAGTGGTTTGTCCAGCTGCGTCGACAGTGCAATGCCACCCAAAAGTCACCATCTTTGTTGGTCCTAATGTTGTCAGGAAATCCAGGCAGAATTGCAAATACTTCGGTGGTTCCAACCTTGTCCCCTTTCAACCAATATTTGATTATCTTTCCAGAACCTTGGCAGAAGAGAAAGAAAGAGCCATCCTTGCTGAATGTAATACCATTAGGGAATTGGATGTTTTTCAGAAGAACACTAGTCTCTTTGGTCACTGGATCATACTTGAAGATCCTCCCACCATTCTCTCCAGAGAAAACCAACTGCATGAAGTTCCTGACACCAAACACCATTATTATGTTACTATAATTACGGAGTATTAATTAAGCAGCAGTTAAGGACATAACTACTGACCTTCTCTTATACTGAGAGCTACTATCTGTGAAATACACATTCCCATCATCATCAATATCCAAGTCATTTGTAAATGTTAAAGGTAGCCCTTCTGCTTCTGTTACAAGGGATGTCGCCACACCTCCTTCTGCTCCTACCTTCATTAATCCAAAGTAGGCATCTGCAATGTATAGATCACCACTCTTCTTGTTGAATCTAAGCCCCAGTGGTCTACCACATATATGCTCGTTCTTAAGGTAACCAAAAGGATTTGGCTGTGGATCACATACGGACCTGAATTTCCCAAACACCACCACTCACTCAACATATTTATTTATAAACTCGTTAATGTAACACCTTCAACATGTGTATTCTTCAACAGAATTGAGAATTCACAAGCTCGTTTCTCACATGCTTTTCAGATAGATACCATATATACTCCCCTACATAAACAGTTAAACATCAGAAAGTGGTTTAACCATAAACAGTTAAACCACTTTCTGATAACAGATTCCATGACAAAGAGGATTTTCTGAATCGAAAGGGGTGACTTTTATGGTATTTGAATAACTTTTATTTTTTACATGAAAAAGTCCGGCCATAACAAACACAATACAGAGTACATAATTCATATTCCATATAATAAAGTAGCGAGAAACACAAACTATAAAACAAGAAGAAGAAAGGGTCACCGATTAGCAGAAGTAAAAGCGAAATCGGTCCAATTGGTGCCATCCCAAAAGAGAATACGGCCATCAGCAACACCAGTATACGGGCCACGACCAAGTGGG TACAAAAAAAAAAAATTAAGAACAGGAAATTAACGGTTGAGAAAATTTTGGCAAATAAACATCATCAGATATTCAGATAAAAGCGCAAAAATACCAAATTACATTACCAACTTTGAAATCTTAAACCCCTCTTTCTCTCATTTTTTTGCCCCCTCACTCTGTCTTCTTCAATGGCAATGGCCGTGAAACAACTATTTCGGCCGTTCGCAACCACAATCCGATGTCGGTCGCAGCGTCTCATCCATTCGGTTCAACCCAAGTTTGCCTTTTTCCACTGCTCCACTTCCCATAAAACCCTTCTTTGGTTGGGATTTTCTGAGTTATCACCCGTAACTTCTTCAACTCCCCTTCAAAGCAGGAACAGTCGTAGATTCAGTACTTCAACTGGGGCTTCGACTCCCCATCAAGTCAACGATTCAGGATCCATTGACTCACCTTTGATGCAATCTATGGAAAATAAGATTAGAGATGAGCTGAATGCTGAATCTGTTGCTGTAAAAGATGCTTACGGTGATGGTCGGCATGTCAGCATCGATGTTGTGTCTTCAGCATTTGAGGGAAAAACAGCTGTAAATAGGCAGAGAATGGTGTACAAGGCTATATGGGAAGAGCTTCAGAACACTGTGCATGCAGTCGACCAGATGATTACTAGAACACCTAGTGAAGCAGCGGACAAGTGATATTATTTGGATTAGTAATTAAAACTGGTTGTTTGATTTTGATAAATTAGCTGGATTGTTGTAATTTTATTTGGGCATGAAATAAAGTTGGTGACATTTCTCCAGCTTCTGATTTGGTGTCTTTGAAAGGTGTAGAGTATTTGTGTGAGCTAATCCTAATGAATGGTTTTCATGCAATGATATCATTTGAGACATTTATGGTCCAGGTTAACAAGTTATGACTACTCTGAGAAAAACAAGAGTATATTGTACTTATTATGGTCACGAAACAGTTGTATAGAAAAAAAGAAGGCAGGATGTTTCCTTTGTATGAACTAGTCTACAGTTAAAGAGCATTGAAATCTGTAAATGGTGGGTGTTTGGCACAGATGAGAATTGAGAAGGTCTCAGGCGGAGGTTGAATCCAAGTCATAAACAGCAACAAATGGCATTAAGACACTACCAATCCAGAGTTTGCCGTCTCTTTCCTCGACTTCGCTGACAGCTTTGACAACCTTCCCCGGGGCATCCTCCAAGACCTGTAGGACCTGACCTTGAGGGCTATACTTGATGATGATACCATGTGGCCAGCCTCCAATGAAGAACAAGAAGTGATACTTTGCTTTAATTGGCAGCTTCAGCACGAAATTCCTGAATCTAGGGTTTGCTGCCATCAAGTGGTTTGTCCAGCTGCGTCGACAGTGCAATGCCACCCAAAAGTCACCATCTTTGTTGGTCCTAATGTTGTCAGGAAATCCAGGCAGAATTGCAAATACTTCGGTGGTTCCAACCTTGTCCCCTTTCAACCAATATTTGATTATCTTTCCAGAACCTTGGCAGAAGAGAAAGAAAGAGCCATCCTTGCTGAATGTAATACCATTAGGGAATTGGATGTTTTTCAGAAGAACACTAGTCTCTTTGGTCACTGGATCATACTTGAAGATCCTCCCACCATTCTCTCCAGAGAAAACCAACTGCATGAAGTTCCTGACACCAAACACCATTATTATGTTACTATAATTACGGAGTATTAATTAAGCAGCAGTTAAGGACATAACTACTGACCTTCTCTTATACTGAGAGCTACTATCTGTGAAATACACATTCCCATCATCATCAATATCCAAGTCATTTGTAAATGTTAAAGGTAGCCCTTCTGCTTCTGTTACAAGGGATGTCGCCACACCTCCTTCTGCTCCTACCTTCATTAATCCAAAGTAGGCATCTGCAATGTATAGATCACCACTCTTCTTGTTGAATCTAAGCCCCAGTGGTCTACCACATATATGCTCGTTCTTAAGGTAACCAAAAGGATTTGGCTGTGGATCACATACGGACCTGAATTTCCCAAACACCACCACTCACTCAACATATTTATTTATAAACTCGTTAATGTAACACCTTCAACATGTGTATTCTTCAACAGAATTGAGAATTCACAAGCTCGTTTCTCACATGCTTTTCAGATAGATACCATATATACTCCCCTACATAAACAGTTAAACATCAGAAAGTGGTTTAACCATAAACAGTTAAACCACTTTCTGATAACAGATTCCATGACAAAGAGGATTTTCTGAATCGAAAGGGGTGACTTTTATGGTATTTGAATAACTTTTATTTTTTACATGAAAAAGTCCGGCCATAACAAACACAATACAGAGTACATAATTCATATTCCATATAATAAAGTAGCGAGAAACACAAACTATAAAACAAGAAGAAGAAAGGGTCACCGATTAGCAGAAGTAAAAGCGAAATCGGTCCAATTGGTGCCATCCCAAAAGAGAATACGGCCATCAGCAACACCAGTATACGGGCCACGACCAAGTGGG ATGGCAATGGCCGTGAAACAACTATTTCGGCCGTTCGCAACCACAATCCGATGTCGGTCGCAGCGTCTCATCCATTCGGTTCAACCCAAGTTTGCCTTTTTCCACTGCTCCACTTCCCATAAAACCCTTCTTTGGTTGGGATTTTCTGAGTTATCACCCGTAACTTCTTCAACTCCCCTTCAAAGCAGGAACAGTCGTAGATTCAGTACTTCAACTGGGGCTTCGACTCCCCATCAAGTCAACGATTCAGGATCCATTGACTCACCTTTGATGCAATCTATGGAAAATAAGATTAGAGATGAGCTGAATGCTGAATCTGTTGCTGTAAAAGATGCTTACGGTGATGGTCGGCATGTCAGCATCGATGTTGTGTCTTCAGCATTTGAGGGAAAAACAGCTGTAAATAGGCAGAGAATGGTGTACAAGGCTATATGGGAAGAGCTTCAGAACACTGTGCATGCAGTCGACCAGATGATTACTAGAACACCTAGTGAAGCAGCGGACAAGTGA MAMAVKQLFRPFATTIRCRSQRLIHSVQPKFAFFHCSTSHKTLLWLGFSELSPVTSSTPLQSRNSRRFSTSTGASTPHQVNDSGSIDSPLMQSMENKIRDELNAESVAVKDAYGDGRHVSIDVVSSAFEGKTAVNRQRMVYKAIWEELQNTVHAVDQMITRTPSEAADK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14114.1 vs. NCBI nr
Match: gi|902230099|gb|KNA21715.1| (hypothetical protein SOVF_038570 [Spinacia oleracea]) HSP 1 Score: 329.7 bits (844), Expect = 3.000e-87 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Spo14114.1 vs. NCBI nr
Match: gi|731348405|ref|XP_010685470.1| (PREDICTED: uncharacterized protein LOC104899877 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 234.6 bits (597), Expect = 1.300e-58 Identity = 127/174 (72.99%), Postives = 144/174 (82.76%), Query Frame = 1
BLAST of Spo14114.1 vs. NCBI nr
Match: gi|659073074|ref|XP_008467240.1| (PREDICTED: uncharacterized protein LOC103504639 [Cucumis melo]) HSP 1 Score: 157.5 bits (397), Expect = 2.000e-35 Identity = 78/89 (87.64%), Postives = 88/89 (98.88%), Query Frame = 1
BLAST of Spo14114.1 vs. NCBI nr
Match: gi|1012015394|ref|XP_015948874.1| (PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Arachis duranensis]) HSP 1 Score: 157.1 bits (396), Expect = 2.600e-35 Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 1
BLAST of Spo14114.1 vs. NCBI nr
Match: gi|1021479622|ref|XP_016183006.1| (PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Arachis ipaensis]) HSP 1 Score: 157.1 bits (396), Expect = 2.600e-35 Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 1
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQB3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038570 PE=3 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.100e-87 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171360 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 9.000e-59 Identity = 127/174 (72.99%), Postives = 144/174 (82.76%), Query Frame = 1
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KRR5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172860 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 7.000e-35 Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Match: F6HE85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g00530 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 9.100e-35 Identity = 95/167 (56.89%), Postives = 111/167 (66.47%), Query Frame = 1
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Match: A9PAF0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.600e-34 Identity = 89/148 (60.14%), Postives = 107/148 (72.30%), Query Frame = 1
BLAST of Spo14114.1 vs. ExPASy Swiss-Prot
Match: BOLA4_ARATH (Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=BOLA4 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.500e-30 Identity = 90/179 (50.28%), Postives = 109/179 (60.89%), Query Frame = 1
BLAST of Spo14114.1 vs. TAIR (Arabidopsis)
Match: AT5G17560.1 (BolA-like family protein) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-31 Identity = 90/179 (50.28%), Postives = 109/179 (60.89%), Query Frame = 1
BLAST of Spo14114.1 vs. TAIR (Arabidopsis)
Match: AT1G55805.1 (BolA-like family protein) HSP 1 Score: 49.7 bits (117), Expect = 2.100e-6 Identity = 38/125 (30.40%), Postives = 61/125 (48.80%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14114.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14114.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14114.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo14114.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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