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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAGTTATCGGGTTTGAGTCTTAACTAAGGTATCGGGTTTGAGTCTTAGGTACGGAAAAAATCTACAACATCGAGATACCCATGCAAACTCATAGATTAGTCCACTCGCTGAAGGCGATGGAACTCCTAGCAGTAAAACAAACAAAAAATAAAAATAAAATAAAATTGTGGGCCTTATCCCAATCACTCATTATTCATTAACTTCATCTTAGCCACCAAAATCCTTTACCCCTCAAAAAGCCCAAGAGAAACAGAATAGTGAGTGATCTTTTACTCTATCCCCAACTTCCCCTCTCACACTCACCAGTCACCTCCCATGGCTACCACATCCACCACCACCTCCCTCTTCTACCCCCACCCTTCCATCAAACCCTCTTCTACTACTTCCTCACCTCCTACCCTTCTCCCTTTCCTATCCCCTCGAACGCGCCGTACCACTAGAATCATGGTCACAGGTATTGAGATAATATCAATATAAAGGATAATGTATCCTTTATATTATTACTAATTATGTAAATATATTTAACATATTAGTGGTAGATTTGATTATATAATATCTTCTAATTATGTACAATATCTTTGTTATTAGACTTCCTAGGCGATTTCGGAGCCAGAGATCCATTCCCAGAAGAACTAGAGAGCAACTTCGGCGAAAAAGTCCTAGGAAACATGAGCACTGAACATAAGATTCTCATTCCTCAAGCTATAGCTCTTGCTCTTTCGCAACAGTCTTGTATTCCTGTCTCTCCTACTGATACTCCCTTGTCTAAGGATGATGCTAAGCAACTCCTCTTCAAGGTTATCGGGTGGCGATTACTCGAAAACGAACAAGAAGAAGATGGTAAGACTGTGTTGAAGTTGACATGTTTGTGGAAGTTGAAGGATGTTGAAGCTGGGGTTGAGTTGAAAGATAGGATTTCTAAGGTTGTTGAAAGTGCAGGGCATTCTCTTGTGTTTCAGCAAGAGGATAATAAGGTGACTGCTGTTTTGTGGACTCAGATTATTGGTGGTTTGAGTATTAATGATTTTATTGTTGCTGCTAAGATTGATGAGGTTAACATCTCTGATCTTCTTCCTAGAAAGAGATCTTGGGCTTAATTTTATTTTTTTTGTTATCGAATATTGTACTAGGGATTTGGTTCCATTTTGTTTCGTAATCCCAATTTTGATATATTTAAATTAGTTGCGTTATATAAGTTTCAGAATGTTCAACCAAATGGCATATTATGTTCCTATACTCAGAAACTTGTATTATTGTAGATTGGGTAAAACCTGACACCTATTACGCTATCAATTTTGCTCCTAATCGTAAATGTGGCTCGGGATGAATGTATTTTTTTTTAGTTGATCTTGGTGCTTGGGCTCCCAATTGATATTCAATTGGGCCACTAAATCCAAAGCCCAATGGCTCTAAACAACAACATCAAACCTAAGTTATCGGGTTTGAGTCTTAACTAAGGTATCGGGTTTGAGTCTTAGGTACGGAAAAAATCTACAACATCGAGATACCCATGCAAACTCATAGATTAGTCCACTCGCTGAAGGCGATGGAACTCCTAGCAGTAAAACAAACAAAAAATAAAAATAAAATAAAATTGTGGGCCTTATCCCAATCACTCATTATTCATTAACTTCATCTTAGCCACCAAAATCCTTTACCCCTCAAAAAGCCCAAGAGAAACAGAATAGTGAGTGATCTTTTACTCTATCCCCAACTTCCCCTCTCACACTCACCAGTCACCTCCCATGGCTACCACATCCACCACCACCTCCCTCTTCTACCCCCACCCTTCCATCAAACCCTCTTCTACTACTTCCTCACCTCCTACCCTTCTCCCTTTCCTATCCCCTCGAACGCGCCGTACCACTAGAATCATGGTCACAGACTTCCTAGGCGATTTCGGAGCCAGAGATCCATTCCCAGAAGAACTAGAGAGCAACTTCGGCGAAAAAGTCCTAGGAAACATGAGCACTGAACATAAGATTCTCATTCCTCAAGCTATAGCTCTTGCTCTTTCGCAACAGTCTTGTATTCCTGTCTCTCCTACTGATACTCCCTTGTCTAAGGATGATGCTAAGCAACTCCTCTTCAAGGTTATCGGGTGGCGATTACTCGAAAACGAACAAGAAGAAGATGGTAAGACTGTGTTGAAGTTGACATGTTTGTGGAAGTTGAAGGATGTTGAAGCTGGGGTTGAGTTGAAAGATAGGATTTCTAAGGTTGTTGAAAGTGCAGGGCATTCTCTTGTGTTTCAGCAAGAGGATAATAAGGTGACTGCTGTTTTGTGGACTCAGATTATTGGTGGTTTGAGTATTAATGATTTTATTGTTGCTGCTAAGATTGATGAGGTTAACATCTCTGATCTTCTTCCTAGAAAGAGATCTTGGGCTTAATTTTATTTTTTTTGTTATCGAATATTGTACTAGGGATTTGGTTCCATTTTGTTTCGTAATCCCAATTTTGATATATTTAAATTAGTTGCGTTATATAAGTTTCAGAATGTTCAACCAAATGGCATATTATGTTCCTATACTCAGAAACTTGTATTATTGTAGATTGGGTAAAACCTGACACCTATTACGCTATCAATTTTGCTCCTAATCGTAAATGTGGCTCGGGATGAATGTATTTTTTTTTAGTTGATCTTGGTGCTTGGGCTCCCAATTGATATTCAATTGGGCCACTAAATCCAAAGCCCAATGGCTCTAAACAACAACATCAAAC ATGGCTACCACATCCACCACCACCTCCCTCTTCTACCCCCACCCTTCCATCAAACCCTCTTCTACTACTTCCTCACCTCCTACCCTTCTCCCTTTCCTATCCCCTCGAACGCGCCGTACCACTAGAATCATGGTCACAGACTTCCTAGGCGATTTCGGAGCCAGAGATCCATTCCCAGAAGAACTAGAGAGCAACTTCGGCGAAAAAGTCCTAGGAAACATGAGCACTGAACATAAGATTCTCATTCCTCAAGCTATAGCTCTTGCTCTTTCGCAACAGTCTTGTATTCCTGTCTCTCCTACTGATACTCCCTTGTCTAAGGATGATGCTAAGCAACTCCTCTTCAAGGTTATCGGGTGGCGATTACTCGAAAACGAACAAGAAGAAGATGGTAAGACTGTGTTGAAGTTGACATGTTTGTGGAAGTTGAAGGATGTTGAAGCTGGGGTTGAGTTGAAAGATAGGATTTCTAAGGTTGTTGAAAGTGCAGGGCATTCTCTTGTGTTTCAGCAAGAGGATAATAAGGTGACTGCTGTTTTGTGGACTCAGATTATTGGTGGTTTGAGTATTAATGATTTTATTGTTGCTGCTAAGATTGATGAGGTTAACATCTCTGATCTTCTTCCTAGAAAGAGATCTTGGGCTTAA MATTSTTTSLFYPHPSIKPSSTTSSPPTLLPFLSPRTRRTTRIMVTDFLGDFGARDPFPEELESNFGEKVLGNMSTEHKILIPQAIALALSQQSCIPVSPTDTPLSKDDAKQLLFKVIGWRLLENEQEEDGKTVLKLTCLWKLKDVEAGVELKDRISKVVESAGHSLVFQQEDNKVTAVLWTQIIGGLSINDFIVAAKIDEVNISDLLPRKRSWA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo14154.1 vs. NCBI nr
Match: gi|902141135|gb|KNA04685.1| (hypothetical protein SOVF_197400 [Spinacia oleracea]) HSP 1 Score: 415.6 bits (1067), Expect = 5.200e-113 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of Spo14154.1 vs. NCBI nr
Match: gi|731329733|ref|XP_010675752.1| (PREDICTED: uncharacterized protein LOC104891716 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 316.6 bits (810), Expect = 3.300e-83 Identity = 164/215 (76.28%), Postives = 181/215 (84.19%), Query Frame = 1
BLAST of Spo14154.1 vs. NCBI nr
Match: gi|1012342430|gb|KYP53624.1| (Putative pterin-4-alpha-carbinolamine dehydratase [Cajanus cajan]) HSP 1 Score: 218.4 bits (555), Expect = 1.200e-53 Identity = 110/177 (62.15%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Spo14154.1 vs. NCBI nr
Match: gi|697180901|ref|XP_009599433.1| (PREDICTED: uncharacterized protein LOC104095092 [Nicotiana tomentosiformis]) HSP 1 Score: 218.0 bits (554), Expect = 1.600e-53 Identity = 129/221 (58.37%), Postives = 153/221 (69.23%), Query Frame = 1
BLAST of Spo14154.1 vs. NCBI nr
Match: gi|356499598|ref|XP_003518625.1| (PREDICTED: uncharacterized protein LOC100815328 [Glycine max]) HSP 1 Score: 217.6 bits (553), Expect = 2.100e-53 Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 1
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBQ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_197400 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 3.600e-113 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CL55_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g088820 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.300e-83 Identity = 164/215 (76.28%), Postives = 181/215 (84.19%), Query Frame = 1
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Match: A0A151SFK7_CAJCA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Cajanus cajan GN=KK1_024519 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 8.500e-54 Identity = 110/177 (62.15%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Match: I1JDK1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G087800 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.500e-53 Identity = 114/183 (62.30%), Postives = 137/183 (74.86%), Query Frame = 1
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Match: A0A072VHS8_MEDTR (Pterin-4-alpha-carbinolamine dehydratase OS=Medicago truncatula GN=MTR_1g048970 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.500e-53 Identity = 119/217 (54.84%), Postives = 147/217 (67.74%), Query Frame = 1
BLAST of Spo14154.1 vs. ExPASy Swiss-Prot
Match: PHS_MICAN (Putative pterin-4-alpha-carbinolamine dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=MAE_39970 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.400e-10 Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 1
BLAST of Spo14154.1 vs. ExPASy Swiss-Prot
Match: PHS_MARHV (Putative pterin-4-alpha-carbinolamine dehydratase OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) GN=Maqu_0976 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.000e-7 Identity = 40/114 (35.09%), Postives = 55/114 (48.25%), Query Frame = 1
BLAST of Spo14154.1 vs. ExPASy Swiss-Prot
Match: PHS_VIBPA (Putative pterin-4-alpha-carbinolamine dehydratase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=VPA0577 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.500e-6 Identity = 33/117 (28.21%), Postives = 59/117 (50.43%), Query Frame = 1
BLAST of Spo14154.1 vs. TAIR (Arabidopsis)
Match: AT5G51110.1 (Transcriptional coactivator/pterin dehydratase) HSP 1 Score: 190.7 bits (483), Expect = 9.600e-49 Identity = 112/225 (49.78%), Postives = 146/225 (64.89%), Query Frame = 1
BLAST of Spo14154.1 vs. TAIR (Arabidopsis)
Match: AT1G29810.1 (Transcriptional coactivator/pterin dehydratase) HSP 1 Score: 77.8 bits (190), Expect = 9.100e-15 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo14154.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo14154.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo14154.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo14154.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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