Spo14204 (gene)

Overview
NameSpo14204
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02054 : 89782 .. 92863 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTGTGTGTTCCACTCAATACAAAGCTACACAATTTATAGGTATCAAAATAACAAACTAAGCCTTATAATAAGGAAGAAAGATACTTATGAAATGAATCCAAGCAACAAAGTAAAACAATGTTCTGATTAACGAGTGGGATATCTTGAAATGACAATTTGTACATTAAACTCAAGGCATAATCCAAAGAGAAGCTAGTAGGAAACTTATTCCTGATTTACAGCTACGATTCCAATTATGAGCTTTGGATCTATTGATGTCACAAGGAAATTTGACAAGCATCGACTCATCGTACACAAATTCAACTCCACTGCTTCAACCTAGGGACGGGAAACACTTGAGGAGAATCTCAGAACCTGTTTCGAGCTCCTGTTCTAATATGGTAAGTGGAGGAATCAATCTCACTATTTTCCTTTTCCAGCAGTTAATATTAACAATTTAACATTCCTGAATTTCGACAAGCATCAACTAGCGGGCCAACTTGTACATCCAACTCTATACCAATAATAAGACCCTGCCCTCGGACTTCTTTCACATGTTGTTTGCCTCCCAATTTCTTTGCTAAGAGTTCTCTGAAGTCTTAACTTTTCTTTGCTAAAAGTACTTGCTTGCTCTCCTGAGTCCTAAGTTCTGCCTGTCCATCCCAAACCATGACATAAATAGGATTAGCCTTTTTTCATTTCAAAATCAAAGTAAGATGCCTTGTATTGACATTACAGTATCACCATTTTCTTCATTTGCTTCAAGTCCTATTGCATCTTACTATTTCCCCTATTTTCAGTACTTTCTCCTTCGTCTAAGCTTCCCCTGTATTGTCCTTCATGCTGATGCCCCCTGTTTTCTTGCTCAACTACTCCCTTTCACCATCTCAGATTGTTGCAAGGATCACAATTGTAGTACAACCTTTGTGGATTGAGTGTTGTATTGGAGCTTCAGATGACAAATTTCCTATCACAATAGCAAAATTGGTTAGGTACTCTAATATATGTGGACTCATTGTGTGTGGATGATGATTTGGAAACAAAACTCATGACACAAATCTAATGCAATTAGCAAAGCAAAGAAAAACAATATATAAATTACAAGAAACATTCAGAAAGTGAATTTTTATAGCCAAACAAGATCAAAAGCTACTTTTCAAACGAAAAAACTATCGTTGGAACATCAGAATAACTATTTTTAAGTTTGGGGCATTTGGTGAAATAAGTTTAATAATAGGGGTATTTGGTGAATTATGAAACTAGGCTAACGACAGACTAACGGACCGTTAAAAGTAAGGGTATTTGGGACATTAAGTCAATTGTCAGGGGTATTTGGTAAATTATTGGAACTTGATGGGCATTTGGTAAATTAATTCAAAATTAATTCAAAGCTCGGGGTATTTCATGAAATAATAAAAATCCTCCCTTCGTGATCCCAGAATTCCATTTCCCTTTCACTCCCCTAAAAACCCACACTGCCTTCACTCCCCTCAAAACTCACCATGCCACCGCTGATTCTCCAGCCGCGTCGTCGTTCCTCTTCTCCCTGAGCGCCTCTTGTCTAACCGCTTCCATTTATTTTGAGGTTTGCGTTTTGTTTAATTTTTGTTTACAGATTTCTCCCATCAACAAATGTAATTATTGTTTAAATTATAAAGTTTAGGGAAATAATTAAGTTTGAATTACAAAAAAAATCAGTCGAATACAATAAATTCAGTCAAATTATTGTCGAACAAAATTGATGATTTGAGTCCAATTAAACTGTTTTTCTTTTAATTAATACTATGAATTTAGTCGAATTTAAATTGGAACTTATGTTGGGGAAAGAAAGAGGGCGATTGGAAAATTGATGGCATTATCAAATTGTATCTGTCTTCTTAGTTCTCAAATTCAAGTGTCAAGGTTGATCTTTCGTTTCCTTTGTTTTTAGCCTGAATCTAATTACTGAAATTAATCAAATCATACCATTTTGTATAAGTGTATGTCTTAATTGGTAATGGTTAGTTGCAATTACATAGTCATTCGTATTGGTTTAATGAAATTACAACGTAAAAATCAAACAATCATGAATGATATTATAGTATCAACTTGTGCCTATCACTCTCTGTGTGTGCAATCACAGTTTGTCACCTCCAGAATATGTCAAGTGAGCTTTGCTGGAGAACTGTTGGAGTACTTTGAATAACTGTTGTGATGGGACACCTAATACCTTAAGGTAAATATTCTAGTATTTCAAGTGTTATGGTTGTGCTGAATTGAAGCCTCATATTGTTAATTTGGTAAGTATGGTAGAGGCTTGCCTGCTTGGACCTGTACTGGGTATTTTCAACAGTAAGGAGCCTTCTGTGTTTCAGCAGGAGTATCAAATGCGGAAAATGAAGCAGGCAAAAGTGTTGCCTTCTGCTAATTTTTTTTTTATGATAGCATTCGTTACATCCTCAACGAAACAAGTATATGCTTCAATAGTTGTGCTCATGTGTGTCAATTTATATTTTTCATAAATCACTATGGTCGAATAAAACTGAATGCAGATGAATTATTGAGTCGGATTAAACTGAATTAGGTCCAATCAAATTGTTTTGTTGAGCTAAACTGTATTTAATAAGATGAAACAGAATGAGGTTAAATTAAATTGAAACTAAACATCAGGGGAAGAATTTATAACTAAAACTCCAGTTTAACACATAGATTTAAGGCACCTTATTTATGGGTTATTTCCTCTTCTCCTTCTAACTAATCAAGTACAACTGTGAAATTAACCATTTTTTGATAACAATTTATTCTGCCAATGCTAGCAGTTGCATTCTCACCTTTGATATCTTGTGCCTACTACACTTGTAACACCCCAACCCTGGTGTTACACCATTTATGTGTTCATTCACTTGAGAGTGTCCATGTGTTGAAGCTTTTGAAGATGCAGTTTTGACTCCCTGTGCTCATTGCTTATGTCGGGAGTGCCTTTGATGCTGCTTCAGGTTATATCCAGTTTGTAGGTATAATCAAGTTTTCTTCAGTAGCTTACCAAAAAATTTCTAATCCTCTAGGACAACATTTCATTTAGCTACTTATTTAAATATAAGGCTAGATATCCACCAG

mRNA sequence

ATGTTGATTGTGTGTTCCACTCAATACAAAGCTACACAATTTATAGAATTCCATTTCCCTTTCACTCCCCTAAAAACCCACACTGCCTTCACTCCCCTCAAAACTCACCATGCCACCGCTGATTCTCCAGCCGCGTCGTCGTTCCTCTTCTCCCTGAGCGCCTCTTGTCTAACCGCTTCCATTTATTTTGAGTTTGTCACCTCCAGAATATGTCAAGTGAGCTTTGCTGGAGAACTGTTGGAGTACTTTGAATAACTGTTGTGATGGGACACCTAATACCTTAAGGTAAATATTCTAGTATTTCAAGTGTTATGGTTGTGCTGAATTGAAGCCTCATATTGTTAATTTGGTAAGTATGGTAGAGGCTTGCCTGCTTGGACCTGTACTGGGTATTTTCAACAGTAAGGAGCCTTCTGTGTTTCAGCAGGAGTATCAAATGCGGAAAATGAAGCAGGCAAAAGTGTTGCCTTCTGCTAATTTTTTTTTTATGATAGCATTCGTTACATCCTCAACGAAACAAGTATATGCTTCAATAGTTGTGCTCATGTGTGTCAATTTATATTTTTCATAAATCACTATGGTCGAATAAAACTGAATGCAGATGAATTATTGAGTCGGATTAAACTGAATTAGGTCCAATCAAATTGTTTTGTTGAGCTAAACTGTATTTAATAAGATGAAACAGAATGAGGTTAAATTAAATTGAAACTAAACATCAGGGGAAGAATTTATAACTAAAACTCCAGTTTAACACATAGATTTAAGGCACCTTATTTATGGGTTATTTCCTCTTCTCCTTCTAACTAATCAAGTACAACTGTGAAATTAACCATTTTTTGATAACAATTTATTCTGCCAATGCTAGCAGTTGCATTCTCACCTTTGATATCTTGTGCCTACTACACTTGTAACACCCCAACCCTGGTGTTACACCATTTATGTGTTCATTCACTTGAGAGTGTCCATGTGTTGAAGCTTTTGAAGATGCAGTTTTGACTCCCTGTGCTCATTGCTTATGTCGGGAGTGCCTTTGATGCTGCTTCAGGTTATATCCAGTTTGTAGGTATAATCAAGTTTTCTTCAGTAGCTTACCAAAAAATTTCTAATCCTCTAGGACAACATTTCATTTAGCTACTTATTTAAATATAAGGCTAGATATCCACCAG

Coding sequence (CDS)

ATGTTGATTGTGTGTTCCACTCAATACAAAGCTACACAATTTATAGAATTCCATTTCCCTTTCACTCCCCTAAAAACCCACACTGCCTTCACTCCCCTCAAAACTCACCATGCCACCGCTGATTCTCCAGCCGCGTCGTCGTTCCTCTTCTCCCTGAGCGCCTCTTGTCTAACCGCTTCCATTTATTTTGAGTTTGTCACCTCCAGAATATGTCAAGTGAGCTTTGCTGGAGAACTGTTGGAGTACTTTGAATAA

Protein sequence

MLIVCSTQYKATQFIEFHFPFTPLKTHTAFTPLKTHHATADSPAASSFLFSLSASCLTASIYFEFVTSRICQVSFAGELLEYFE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14204.1Spo14204.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14204.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14204.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14204.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14204.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010508 positive regulation of autophagy
biological_process GO:0008152 metabolic process
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005730 nucleolus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008022 protein C-terminus binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression